Sed0010168 (gene) Chayote v1

Overview


Name	Sed0010168
Type	gene
Organism	Sechium edule (Chayote v1)
Description	elongation factor P
Location	LG08: 9688153 .. 9694699 (-)
RNA-Seq Expression	Sed0010168
Synteny	Sed0010168

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCTTACTTGCAATTATAAATAACCTAAGGTGGCGGGGTTCCGGCAACCAGAAGCAGAAGCAGACCAGGGCAAAGCATAGGAGTTGGAACTTGGAAGCTGTTAATGGAAACGAAGCTTTAGTTTCTTCACTAAGCTTCTGGATTTTGCAGTGCAACATGATGCGAACTCGTCTACTCCGCCAAGGCATCTCTCGAGCTCTCTCTCCATCTATAGATTCTTCACCCTTCAGATCCCTTGCTTCGCCAACCACCTCTTCTTCATCCCCTCTATCGGATTCACTCTCCTCTCCATTCGCTCCGCCGTCAGCAGCCGTGGACGGCCGCTCCCACTTGCTCGGCTCCCTGTGGTCCGTCATTCCGCAGCGGGGATTTAAAGCGCATGGTTCCGATGTATGTTTGATCCTGCTACTCGCTGATTTTTCCATTTTATTCGGCGTTTCCATCAGTATTTAGTATTTTGTATTATGGGTTTTACTCGCAGCATAGTTTAGTAGGGGTAGGGTTTAGGGTCACCTAATTTCATACTACTTCGTAAGCTGGTACAACCCTTAACTGATATAATTCAGTCTATATAGTTTCGAGATTGTTAGAAATAATCTCGAGCTAGAATTTAATCCATATGGTTTGGGACGATTGACGAATTAAGTATGTGGGAGTAACTAGTATCCATGCATGAATGATGTGATTTTTTGTTAAATCACTTCACTTAACTCACTTCAATTATTGACATGAATAACTAACTTTCACATATTTAATTAACAGTCGATTATACAAAGTTTGTTTTTAAGATTTTATCTAACGACTAAATTTAAATTTTAGTTTTTGAAACCATAAACACTAAATTCTAACTCTATAAATTAAATTATAGTTTTTAATATCATAAGACCCAAATTCTAACGTTTTCCAAACCAAAATTTATAATTTATCGTAACAAGACGATGTAGCTTAGTTCGGTGATTTTTATTTTGTGGGTTTCGTTTATAGGAAACATTTTGTGCTTTTGTTGAACTTTGTCGTTTGAGATGTCTTAATTTCTAGTGCTTTCTGTTTATGATTGCAGGTGAGAGTGGGAAATATAATTCAACGGAAAGGTTGCTGTTTCTATGTGTTGATATTCGATTGTGAACTGCATGTTGACTGATAAAGCAATTGTTTTTTTCTGTCTCTCATGATATGTACATTACTGACTGAATGAATGTGGTTTTGTTGCCCAAATTATTTGCTCCCAGAACGTATTTACCAGGTCTGCTTTGATGTCTTTGCATTTCATTGATATGATCGAAATATCATATTAGTACTATCTTATGTGATGCTTGTTGCTGGGTTATGCTTCCTGGTTTAGGTTACAAAAGTCGAACATTCACATGAAGGAAGAGGAAAAGCCACGATCAAGGTTCAGTTCTGAACTTTAAACTTCCTATATTTGGATTTGCACTGAATTTTTCCTTAGATATATTTTTTGGGATAACCTATAGCATGCTATATTTGGATAAGGGAGATTGTAAATAGATCTTCCAATTCCATCAAGCAAAGGCAAGAATTGGGTTTAGGGTTCTCTCTTAAACACTCATCTGACCAAGTCCCTTTATGGTAGAATTCCTATCATTTGAGGTGTAAAAAATGTCGTTAGATATTTGTAGAGGTGAATTTTAACATCTCTTACATGCTGTGGCTTTTCCTCTTTGGCATCTTCCGATGTTCCCTAAGAGCCTAAAAGAATCTTTGCAGCAAATATTTTGCTGTCATCCTTGAAGATGGATATGAGACAACGCTTGTTAGGGCTATTGAACTCTTGAAGGGGTTGAGAGGGATATGTATATATAGTGGGACATTGTTGGTTTTCTAGCATAGACTCGGAACGTCATTTTACAAAAATTTTTGTAATAACTTCCCCTCAATGAACGACATTTGTACTGCTTAATCTCTACAGGTCCTAGGACCAAGAAAGTGTTTCTTCTCCTCATTTTCATTTGTCTCTTTGATGAACTTCTTTCGTATGAATCTTGTCATCTCTCCCTCACATATACCTATTTGTGGCAAATGGATGAAATTGAGAGAATAGGAAAAGGATGATTCTCGGGTCACCGAGAATCATTCTCCACATAATCACATTTTCCTCAAATCACATTTTTATTTTTCTCCTAGCTACTTTTAATTCTCCCCTCGACAACTTTTATTTTCCCATAACTGTTTCCACTTTCATCATATTCATTATTTCTTTTTCCACATATCTTTTTCCACATAATCATTCCTTTCACTCCAAGCACAAATAATCATTCGCTTTCCCTCAAACAGCCCCATCTCACATATATACATGTGTGTATGCATGGACGTGTGCACTGTGCATTGCATACTTGTGCACAGTATATGCATGCACTCCAGTTGTCAGAGATCAAAGTTGCCTCTTTCTTTGAGGATTAAATGCAATTTTTTTTCTTTGCTGATGTAAGATTAACCTCTACCTTATCACAGGTTGAACTTCGTGACGTGGAGAGTGGAAATAAAGTAACTCAACGGTTGGCCACAGATGAATCTGTTGACAGTTACGCACTGTTCTTTCTATATATCCTTCTCATGCATTAAGCCTTGTATTATGCAAATCTTGTTGAAAATGAAATCCTTTAACCTCGCTGAGGATGTTGGTCTATTTTTTCATGTTTTTGATTGTCATGATTACTGATTTACTTTTGTACTACTTTTTTTTACCATAATTTCTAGATCCTAAGCAGCGACAGTTTTGAAAGGAATGCAGCAATACATTTGCAGACACCCACCCTTTTATTTTTCTAAGTTGGGGGACATGATGTTTTAGCGATTTCTATTAGTAATGATTCTAGCATAAATTCTATATCCTAAACAGCGACAGTTTGGAAAGAAATTCAGCAAGTCATACATTTACATGATCCTAGCGATTTCAGTTAGTAGATGGTCTTTCGTGGATGTATACAATTATCTGATTTATTCCTTAAATTTTTTACTCATTTAGGTTTTGTTATCTCGCTATACAATATCTAGGACCATTAGTTTTTATTCCATTCCTGTCTATGATATAATACTATAATTTTTTATGTCTAAACATCAGGAATAGTGTTAGGCAATCCTAAACATTAGGAATAATACTGTAGTTACCTTCATATCTTGTGACTAATGAATTATTGCAGGGGTTTTTGTGCAGGAGAAATCATATATATTTATGTGCAAAGATCGGGACGCCAAAGTATTATTGATGGAGTGAGTTTCACCAAGCCCTTCAATATTTATATGTGGTGAATTTGAATTTAAAAGTATTATAGAATTAAATCTTCTGAAAATTTGTTCTGCTAATTGTATACCAGCCCTGATACATATGAGCAACTGGAAGTCCCTGAGGAATTGTTTGGCAAAGCTGCCATGTACTTACAAGGTGGTTAAAATATCGTGCACAAGCATTACAAATTTGTATTCCATCTGTTACTTAACTCGTGTATAATCCAGCATGATTAATTCATTGTGATTGAAGGATCGTATCTTTTCTGACTAGGAGAAAGCCTTTGCTGTCTAAAAATGTTTCTCATATATTCTCTCATTTAATATAATCATCATAATCATAATTATATCTATCCATGCCACAGAATGTCGATCCATTTTTATTTGTCGTGTACCATCGTCATCCATAATCAATATCTTTTTGTTTACGCAAGGAACTAACACTTGATTAACGTGAAAAATAGATGACATGAAAGTTATGGTACAACTTTTCAATGACACTCCCTTATCTGCAACGGTTCCAAAAAAAGTGACATGTGTTGTGAAGGAAGCACAACCACCTATGAAGGGAATTGCAGCTACTCCCAAGTATGTTCCTTCTACTTTGTGAATGCTGACAAATGAAACTGTTGACCATGCAATTTTTAGTTATAAGTTTTCTCACTGTATTATCTTTTTTTTTTTTTTTAACAAGGGTAACCATTCTCACTGTATTATCTTGGCTAAGTTGTATCAAAATTTTGTTCGAAATACAAATTCAAGTGAAATGGGGTAAGAGAAATCAAGCCAGGTGCAGGGAGTATAACTTGTGAGTTTTGTGATTGGAAAAAAAAATTGGGTTCAAGCAATCTCTTAGGTTAAAAGCACATACGCAATTAGCCTTTGTGGATTGACGTAGTAGTCAAATAAAGGTATTTATAAATCATAAAGTGCTTAAAGGTTATGAGTTCAATCCATAATAATCATACCTAGAAATGAATTTCCCATGAGTTACCTTGACAACCAAGTGTAGTAGAGTTTAGTTGTCTTGCAATAATAGTCAAGGTTTATGTAAGCTTGCCCGGATAATCACAAATATTAAAAAAAAAAAAAACGAGGCAATCCTTGCTTTACTCTTATTGTGAGCATGAATGCAAATTATTACATGCAAATGGTTCATAACATAATTGTTCAAATTTTAGTTAATTAAATTTGTCATGTGAAATCAAGTGTACGGGATAATTACCCATTCTGCTATACTTTTTTTTGGACATTGGTATTGTTTCACTTTGCCGTTGGAAATGTTTTCAAACTTACCTTTACCTCGTAAGTTCTTAGAACGTAAAAACTTCCACCTTCATCTTCTGGGCAGGAAAACTCTCGATTGAAAGGGGCTACTTAGCCCCGTTTGTTAACCATTTTATTTTAGGCTAAACTCCAATATTAGTAAATGAATTTCAAGAGTTTCCTAGTGATTGAAATCAGTACTCCAAGGAATTATTCGGTTTTGTTCATGGCATGGAGTTATACTCCTGTAATAGTTGTCAGAATGTTCAATATTTCTTCTTGTCAACAGATTTGTATGGGGAGTTTGATATGCGGGAATGAATCGAGAATGGGCCTACAAAAACTTGTTTTCGTGGTCAGTATAAGTATATGAATATGAATCACTATTCTTCTTTTTGAGCCTTCACTCCTTTTAATAGGAAACAAAGAGGGGACATATTTTTGAAGGAAGTACAGCATAGGGGCAGGGGTAGAGAGAACCCCTCCCAAAAACTACACCATAATGCCTTCAATTTTGAACTTGAAACATTTGAGTTCCTTTACATTGGAAAGATGGCTGAGATCATTGCTATTGAGATCATTACTATTGTCAGTGATCAATATTTTGAACATTTTATGTAGTATGGTTAGTCTCTTGCTCAAATCTGGACTAATTTAATTTGATCAGAAAAAACGAGATAATAAGTCGATGAAAGCTAAAGACCAGGAAACAGAGGTTTGAAGGGGTATTAATCAAGAGGACTTAAAGTTTTGAAAGCTTCAAAGAAATGGACTGTCTCTGTCCAAGCGTCCATCTTTTTTCTTAATTTTTCATAAGTCTTGCTTGGCCCATAATTTATGAAAAATATTATTGATTGTTCTTGTCCTAAAAACAATTTAGCTAGGCATAAACCCTATATTCTAATAACTTGGTTTGATTCAGGGAAAAGAAGGCACTACTAGACAATGGCATGACAATAAAAGTAAGTTTCGTGCTTCATTTTTATACTGCTACTGTTTAGTGTTGTAATGTCAGTTCTTTAAAAAAAAAGTAATAACAGTTTTATTCTTTCGCCGTGCCAAGTTGAATCTGTTTTCATGCTCTACTTTTTTAGCCTTGATGAGCCTCCCTGTATCATTACCTTCAACAATTTTAGGCTCTCTTCCTTTCTTTCATGCGTATGATCGCTTCTCAGAAACATCCTCACGGACTTCTCTTTTTCACCATCACGATGCAATTATTTGAGTTCTCATGCTATACACGGACACTGCACATGGGCACACATATACTCATTTATATGCTTATTTGAATGTGCACATCTATGTATACATTTATGCGTAATGAATATGAAGTTTGTACATCGGTAGACGAAGGCATTGCTTATGAACTCCGGTAATTGAATGTCGGTGTGTATATGCTTCATGATTCATGATAGATACAACAGTGGCTTAGCCTTTGAGCAGTTCCCCCTATATATTATTGGCTATTCTCTGTAACTCTATATAGTTAGTTCACTCACGTTTTCCTCTGCAACAGTTACTGAAGCAATTTAGAGTGCTATAAGGACAGTGCCCTACATGTATTTTCAGGTACCACCTCATGTTGTAGTTGGAGATGTTTTAGTGATTAATACGGAGGACGACTCTTATATTGAAAGGTACGCCCTCTTGTCGATTACTTCTCGCGATGCATTTGTGGATCATGTTACTCTGTTGTGGAAAATCATCACTTTGCTGTGTTCTTTTTTTGCACAATGTTTCTCCTTTGTAGGGCAAAGGGATAGTCGAATGATTCCGGTAATGAGCAGTTAGATAGTGCGTTGTGTGGTTCTTTGATTTTTAGCCAGCTTAAGCTTCAATTTTTCATTTTTGATGCTTTTGGGTGAGGAGGTATAAAATTATTTGGTATAAAGAGGGTGGGCAGCCCCAACCATCTTGCAAGTTGCAACTGCTAAATATGCTTCTTTGGGATATATTGAATTGTTTTGATTCTTCCAATAAATGCTTCTTTGTTATACTGCCCAAATTTGATGTCCCATTTTCAGTTATTTTTGC

mRNA sequence

CATCTTACTTGCAATTATAAATAACCTAAGGTGGCGGGGTTCCGGCAACCAGAAGCAGAAGCAGACCAGGGCAAAGCATAGGAGTTGGAACTTGGAAGCTGTTAATGGAAACGAAGCTTTAGTTTCTTCACTAAGCTTCTGGATTTTGCAGTGCAACATGATGCGAACTCGTCTACTCCGCCAAGGCATCTCTCGAGCTCTCTCTCCATCTATAGATTCTTCACCCTTCAGATCCCTTGCTTCGCCAACCACCTCTTCTTCATCCCCTCTATCGGATTCACTCTCCTCTCCATTCGCTCCGCCGTCAGCAGCCGTGGACGGCCGCTCCCACTTGCTCGGCTCCCTGTGGTCCGTCATTCCGCAGCGGGGATTTAAAGCGCATGGTTCCGATGTGAGAGTGGGAAATATAATTCAACGGAAAGAACGTATTTACCAGGTTACAAAAGTCGAACATTCACATGAAGGAAGAGGAAAAGCCACGATCAAGGTTGAACTTCGTGACGTGGAGAGTGGAAATAAAGTAACTCAACGGTTGGCCACAGATGAATCTGTTGACAGGGTTTTTGTGCAGGAGAAATCATATATATTTATGTGCAAAGATCGGGACGCCAAAGTATTATTGATGGACCCTGATACATATGAGCAACTGGAAGTCCCTGAGGAATTGTTTGGCAAAGCTGCCATGTACTTACAAGATGACATGAAAGTTATGGTACAACTTTTCAATGACACTCCCTTATCTGCAACGGTTCCAAAAAAAGTGACATGTGTTGTGAAGGAAGCACAACCACCTATGAAGGGAATTGCAGCTACTCCCAAGGAAAAGAAGGCACTACTAGACAATGGCATGACAATAAAAGTACCACCTCATGTTGTAGTTGGAGATGTTTTAGTGATTAATACGGAGGACGACTCTTATATTGAAAGGGCAAAGGGATAGTCGAATGATTCCGGTAATGAGCAGTTAGATAGTGCGTTGTGTGGTTCTTTGATTTTTAGCCAGCTTAAGCTTCAATTTTTCATTTTTGATGCTTTTGGGTGAGGAGGTATAAAATTATTTGGTATAAAGAGGGTGGGCAGCCCCAACCATCTTGCAAGTTGCAACTGCTAAATATGCTTCTTTGGGATATATTGAATTGTTTTGATTCTTCCAATAAATGCTTCTTTGTTATACTGCCCAAATTTGATGTCCCATTTTCAGTTATTTTTGC

Coding sequence (CDS)

ATGATGCGAACTCGTCTACTCCGCCAAGGCATCTCTCGAGCTCTCTCTCCATCTATAGATTCTTCACCCTTCAGATCCCTTGCTTCGCCAACCACCTCTTCTTCATCCCCTCTATCGGATTCACTCTCCTCTCCATTCGCTCCGCCGTCAGCAGCCGTGGACGGCCGCTCCCACTTGCTCGGCTCCCTGTGGTCCGTCATTCCGCAGCGGGGATTTAAAGCGCATGGTTCCGATGTGAGAGTGGGAAATATAATTCAACGGAAAGAACGTATTTACCAGGTTACAAAAGTCGAACATTCACATGAAGGAAGAGGAAAAGCCACGATCAAGGTTGAACTTCGTGACGTGGAGAGTGGAAATAAAGTAACTCAACGGTTGGCCACAGATGAATCTGTTGACAGGGTTTTTGTGCAGGAGAAATCATATATATTTATGTGCAAAGATCGGGACGCCAAAGTATTATTGATGGACCCTGATACATATGAGCAACTGGAAGTCCCTGAGGAATTGTTTGGCAAAGCTGCCATGTACTTACAAGATGACATGAAAGTTATGGTACAACTTTTCAATGACACTCCCTTATCTGCAACGGTTCCAAAAAAAGTGACATGTGTTGTGAAGGAAGCACAACCACCTATGAAGGGAATTGCAGCTACTCCCAAGGAAAAGAAGGCACTACTAGACAATGGCATGACAATAAAAGTACCACCTCATGTTGTAGTTGGAGATGTTTTAGTGATTAATACGGAGGACGACTCTTATATTGAAAGGGCAAAGGGATAG

Protein sequence

MMRTRLLRQGISRALSPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSHLLGSLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNKVTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDDMKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVVVGDVLVINTEDDSYIERAKG

Homology

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BLAST of Sed0010168 vs. NCBI nr
Match: XP_023529869.1 (uncharacterized protein LOC111792589 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.1 bits (1089), Expect = 8.8e-115
Identity = 224/262 (85.50%), Postives = 240/262 (91.60%), Query Frame = 0


Query: 1   MMRTRLLRQGISRA--LSPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSH 60
           MMR  LLR+GISR   L  S  SS FRSLA+P T+SSS L D +SSP  P  A+VDGR H
Sbjct: 1   MMRALLLRKGISRTPHLPSSTISSSFRSLAAPITASSSSLLDLISSPL-PRPASVDGRCH 60

Query: 61  LLGSLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVES 120
            LGSLWSVI +RGFK HGSDVRVGNII+RKERIYQVTKV+HSHEGRGKATIKVELRDVES
Sbjct: 61  SLGSLWSVIQRRGFKVHGSDVRVGNIIERKERIYQVTKVDHSHEGRGKATIKVELRDVES 120

Query: 121 GNKVTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYL 180
           GNKVTQRLATDESVDRVFVQEK+YIFMC+DRDAK+LLMDPDTYEQLEVPEELFGKAAMYL
Sbjct: 121 GNKVTQRLATDESVDRVFVQEKAYIFMCRDRDAKILLMDPDTYEQLEVPEELFGKAAMYL 180

Query: 181 QDDMKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPH 240
           QDDMKVMVQLFNDTPLSA+VPK+VTCVVKEAQPPMKGIAATPKEKKA+LDNGMT+KVPPH
Sbjct: 181 QDDMKVMVQLFNDTPLSASVPKRVTCVVKEAQPPMKGIAATPKEKKAVLDNGMTLKVPPH 240

Query: 241 VVVGDVLVINTEDDSYIERAKG 261
           VVVGDV+VINTEDDSYIERAKG
Sbjct: 241 VVVGDVVVINTEDDSYIERAKG 261

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BLAST of Sed0010168 vs. NCBI nr
Match: XP_022968100.1 (uncharacterized protein LOC111467432 [Cucurbita maxima])

HSP 1 Score: 422.2 bits (1084), Expect = 3.3e-114
Identity = 223/262 (85.11%), Postives = 239/262 (91.22%), Query Frame = 0


Query: 1   MMRTRLLRQGISRA--LSPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSH 60
           MMR  LLR+GISR   L  S  SS FRSLA+PTT+ SS L D +SSP  P  A+VDGR H
Sbjct: 1   MMRALLLRKGISRTLHLPSSTISSSFRSLAAPTTAFSSSLLDLISSPL-PRPASVDGRCH 60

Query: 61  LLGSLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVES 120
            LGSLWSVI  RGFK HGSDVRVGNII+RKERIYQVTKV+HSHEGRGKATIKVELRDVES
Sbjct: 61  SLGSLWSVIQHRGFKVHGSDVRVGNIIERKERIYQVTKVDHSHEGRGKATIKVELRDVES 120

Query: 121 GNKVTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYL 180
           GNKVTQRLATDESVDRVFVQEK+YIFMC+DRDAK+LLMDPD+YEQLEVPEELFGKAAMYL
Sbjct: 121 GNKVTQRLATDESVDRVFVQEKAYIFMCRDRDAKILLMDPDSYEQLEVPEELFGKAAMYL 180

Query: 181 QDDMKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPH 240
           QDDMKVMVQLFNDTPLSA+VPK+VTCVVKEAQPPMKGIAATPKEKKA+LDNGMT+KVPPH
Sbjct: 181 QDDMKVMVQLFNDTPLSASVPKRVTCVVKEAQPPMKGIAATPKEKKAVLDNGMTLKVPPH 240

Query: 241 VVVGDVLVINTEDDSYIERAKG 261
           VVVGDV+VINTEDDSYIERAKG
Sbjct: 241 VVVGDVVVINTEDDSYIERAKG 261

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BLAST of Sed0010168 vs. NCBI nr
Match: XP_022933865.1 (uncharacterized protein LOC111441152 [Cucurbita moschata])

HSP 1 Score: 419.1 bits (1076), Expect = 2.8e-113
Identity = 223/267 (83.52%), Postives = 238/267 (89.14%), Query Frame = 0


Query: 1   MMRTRLLRQGISRAL-------SPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAV 60
           MMR  LLR+GISR L       S S  SS FRSLA+P T+SSS L D +SSP  P  A+V
Sbjct: 1   MMRALLLRKGISRTLHLPSSTISSSTISSSFRSLAAPITASSSSLLDLISSPL-PRPASV 60

Query: 61  DGRSHLLGSLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVEL 120
           DG  H LGSLWSVI  RGFK HGSDVRVGNII+RKERIYQVTKV+HSHEGRGKATIKVEL
Sbjct: 61  DGPCHSLGSLWSVIQHRGFKVHGSDVRVGNIIERKERIYQVTKVDHSHEGRGKATIKVEL 120

Query: 121 RDVESGNKVTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGK 180
           RDVESGNKVTQRLATDESVDRVFVQEK+YIFMC+DRDAK+LLMDPDTYEQLEVPEELFGK
Sbjct: 121 RDVESGNKVTQRLATDESVDRVFVQEKAYIFMCRDRDAKILLMDPDTYEQLEVPEELFGK 180

Query: 181 AAMYLQDDMKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTI 240
           AAMYLQDDMKVMVQLFNDTPLSA+VPK+VTCVVKEAQPPMKGIAA PKEKKA+LDNGMT+
Sbjct: 181 AAMYLQDDMKVMVQLFNDTPLSASVPKRVTCVVKEAQPPMKGIAAAPKEKKAVLDNGMTL 240

Query: 241 KVPPHVVVGDVLVINTEDDSYIERAKG 261
           KVPPHVVVGDV+VINTEDDSYIERAKG
Sbjct: 241 KVPPHVVVGDVVVINTEDDSYIERAKG 266

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BLAST of Sed0010168 vs. NCBI nr
Match: KAG6588130.1 (Mitochondrial dicarboxylate/tricarboxylate transporter DTC, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 417.9 bits (1073), Expect = 6.3e-113
Identity = 221/262 (84.35%), Postives = 237/262 (90.46%), Query Frame = 0


Query: 1   MMRTRLLRQGISRA--LSPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSH 60
           MMR  LLR+GISR   L  S  SS FRSLA+P T+SSS L D +SSP  P  A+VDG  H
Sbjct: 346 MMRALLLRKGISRTLHLPSSTISSSFRSLAAPITASSSSLLDLISSPL-PRPASVDGPCH 405

Query: 61  LLGSLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVES 120
            LGSLWSVI  RGFK HGSDVRVGNII+RKERIYQVTKV+HSHEGRGKATIKVELRDVES
Sbjct: 406 SLGSLWSVIQHRGFKVHGSDVRVGNIIERKERIYQVTKVDHSHEGRGKATIKVELRDVES 465

Query: 121 GNKVTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYL 180
           GNKVTQRLATDESVDRVFVQEK+YIFMC+DRDAK+LLMDPDTYEQLEVPEELFGKAAMYL
Sbjct: 466 GNKVTQRLATDESVDRVFVQEKAYIFMCRDRDAKILLMDPDTYEQLEVPEELFGKAAMYL 525

Query: 181 QDDMKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPH 240
           QDDMKVMVQLFNDTPLSA+VPK+VTCVVKEAQPPMKGIAA PKEKKA+LDNGMT+KVPPH
Sbjct: 526 QDDMKVMVQLFNDTPLSASVPKRVTCVVKEAQPPMKGIAAAPKEKKAVLDNGMTLKVPPH 585

Query: 241 VVVGDVLVINTEDDSYIERAKG 261
           VVVGDV++INTEDDSYIERAKG
Sbjct: 586 VVVGDVVMINTEDDSYIERAKG 606

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BLAST of Sed0010168 vs. NCBI nr
Match: XP_008451020.1 (PREDICTED: elongation factor P [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 2.5e-109
Identity = 219/260 (84.23%), Postives = 234/260 (90.00%), Query Frame = 0


Query: 1   MMRTRLLRQGISRALSPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSHLL 60
           MMRT LLR+G+S+ALS S  S  F S A    SSSS LSD L+SP     +AVD R HLL
Sbjct: 1   MMRTLLLRKGVSKALS-SPSSINFSSFA----SSSSFLSDFLTSP--QTRSAVDARRHLL 60

Query: 61  GSLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGN 120
           GSLWSVI  RGFK HGSDV+VGNII+RKERI+QVTKV+HSHEGRGKATIKVELRDVESGN
Sbjct: 61  GSLWSVIQHRGFKVHGSDVKVGNIIERKERIFQVTKVDHSHEGRGKATIKVELRDVESGN 120

Query: 121 KVTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQD 180
           KVTQRLATDESVDRVFVQEK+YIFMCKDRDAKVLLMDPDT+EQLEV EELFGKAAMYLQD
Sbjct: 121 KVTQRLATDESVDRVFVQEKAYIFMCKDRDAKVLLMDPDTFEQLEVSEELFGKAAMYLQD 180

Query: 181 DMKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVV 240
           DMKVMVQLFNDTPLSA+VPK+VTCVV EAQPPMKGIAATPKEKKALLDNGMTIKVPPH+V
Sbjct: 181 DMKVMVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIV 240

Query: 241 VGDVLVINTEDDSYIERAKG 261
           VGDV+VINTEDDSYIERAKG
Sbjct: 241 VGDVIVINTEDDSYIERAKG 253

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BLAST of Sed0010168 vs. ExPASy Swiss-Prot
Match: B8IS61 (Elongation factor P OS=Methylobacterium nodulans (strain LMG 21967 / CNCM I-2342 / ORS 2060) OX=460265 GN=efp PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.7e-34
Identity = 73/187 (39.04%), Postives = 115/187 (61.50%), Query Frame = 0


Query: 73  KAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNKVTQRLATDESV 132
           K   S +R GN++++  R+Y +   E+ H G+G    ++++R +  G KV++R  T E V
Sbjct: 2   KVIASSLRKGNVVEKDGRLYVILSAENIHPGKGTPVTQLDMRRITDGVKVSERYRTTEQV 61

Query: 133 DRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDDMKVMVQLFNDT 192
           +R FV+++ + F+  D +     M+P++YEQ+ VPE++ G  A YLQ+ M VM+ L N  
Sbjct: 62  ERAFVEDREHTFLYSDGEG-FHFMNPESYEQVAVPEDVIGDQAAYLQEGMAVMLSLHNGV 121

Query: 193 PLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVVVGDVLVINTEDD 252
           PL+  +P++VT  V E +P  KG  A+   K A L NG+  +VPPH+  G  +VI T D 
Sbjct: 122 PLAIELPQRVTLEVTETEPVTKGQTASSSYKPATLSNGVRTQVPPHITAGTRVVIMTADG 181

Query: 253 SYIERAK 260
           SY+ERAK
Sbjct: 182 SYVERAK 187

[Close]

BLAST of Sed0010168 vs. ExPASy Swiss-Prot
Match: B0UJ99 (Elongation factor P OS=Methylobacterium sp. (strain 4-46) OX=426117 GN=efp PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.7e-34
Identity = 72/187 (38.50%), Postives = 116/187 (62.03%), Query Frame = 0


Query: 73  KAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNKVTQRLATDESV 132
           K   S +R GN++++  R+Y +   E+ H G+G    ++++R +  G KV++R  T E V
Sbjct: 2   KVIASSLRKGNVVEKDGRLYVILSAENIHPGKGTPVTQLDMRRITDGVKVSERYRTTEQV 61

Query: 133 DRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDDMKVMVQLFNDT 192
           +R FV+++ + F+ KD +     M+P++YEQ+ VP+++ G  A YLQ+ M VM+ L N  
Sbjct: 62  ERAFVEDREHTFLYKDGEGS-HFMNPESYEQVAVPDDVIGDQAAYLQEGMAVMLSLHNGV 121

Query: 193 PLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVVVGDVLVINTEDD 252
           PL+  +P++VT  + E +P  KG  A+   K A+L NG+   VPPH+  G  +VI T D 
Sbjct: 122 PLAIELPQRVTLEIVETEPVTKGQTASSSYKPAVLSNGVRTLVPPHITTGTRVVIMTADG 181

Query: 253 SYIERAK 260
           SY+ERAK
Sbjct: 182 SYVERAK 187

[Close]

BLAST of Sed0010168 vs. ExPASy Swiss-Prot
Match: A4YTY9 (Elongation factor P OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=efp PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.0e-34
Identity = 69/187 (36.90%), Postives = 119/187 (63.64%), Query Frame = 0


Query: 73  KAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNKVTQRLATDESV 132
           K   S +R GN+I++  ++Y V   E+ H G+G    ++E+R +  G K+++R  T + V
Sbjct: 2   KVIASSIRKGNVIEQDGKLYVVVSAENIHPGKGTPVSQIEMRRISDGVKISERYKTTDQV 61

Query: 133 DRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDDMKVMVQLFNDT 192
           ++  ++E++Y ++ +D+D     M+P+TY+Q++VP+++ G  A YLQ++M V + + +  
Sbjct: 62  EKATIEERNYTYLYEDQDG-FHFMNPETYDQVQVPKDVVGTQAAYLQENMTVKLSMHDTN 121

Query: 193 PLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVVVGDVLVINTEDD 252
           P+S  +P++VT  V E +P  KG  A+   K A+L NG+   VPPH+ VG  +V+ TED 
Sbjct: 122 PVSIALPQRVTLEVVETEPVTKGQTASSSYKPAVLSNGVRTGVPPHITVGTRIVVMTEDG 181

Query: 253 SYIERAK 260
           SY ERAK
Sbjct: 182 SYCERAK 187

[Close]

BLAST of Sed0010168 vs. ExPASy Swiss-Prot
Match: Q5LU15 (Elongation factor P OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=efp PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-33
Identity = 70/186 (37.63%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 73  KAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNKVTQRLATDESV 132
           K +G+++R GN+++    ++   KV+H   G+G A  +VELR++ +G+K+ +R  + + V
Sbjct: 3   KINGNEIRPGNVLEHNGGLWAAVKVDHVKPGKGGAFAQVELRNLRNGSKLNERFRSADKV 62

Query: 133 DRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDDMKVMVQLFNDT 192
           +RV +++K   F+  + D  ++ MD +TYEQ+E+P +L G+   +LQD M ++V+ +   
Sbjct: 63  ERVRLEQKDQQFL-YESDGMLVFMDAETYEQIELPADLLGERRPFLQDGMTILVEFYESE 122

Query: 193 PLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVVVGDVLVINTEDD 252
            L+AT+P+KVTC + E +P +KG  A    K A+LDNG+ + VPP V   +++V+NTE  
Sbjct: 123 ALNATLPQKVTCKIVETEPVVKGQTAANSFKPAVLDNGVKVMVPPFVGQDEMIVVNTETM 182

Query: 253 SYIERA 259
            Y ERA
Sbjct: 183 EYSERA 187

[Close]

BLAST of Sed0010168 vs. ExPASy Swiss-Prot
Match: B1M2B1 (Elongation factor P OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831 / NBRC 15690 / NCIMB 10815 / 0-1) OX=426355 GN=efp PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-33
Identity = 71/187 (37.97%), Postives = 115/187 (61.50%), Query Frame = 0


Query: 73  KAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNKVTQRLATDESV 132
           K   S +R GN++++  ++Y +   E+ H G+G    ++++R +  G KV++R  T E V
Sbjct: 2   KVIASTLRKGNVVEKDGKLYVILFAENIHPGKGTPVTQLDMRRITDGVKVSERYRTTEQV 61

Query: 133 DRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDDMKVMVQLFNDT 192
           +R FV+++ + F+  D +     M+P+ YEQ+ VPE++ G AA YLQ+ M VM+ + N  
Sbjct: 62  ERAFVEDREHTFLYSDGEG-FHFMNPENYEQIAVPEDVVGDAAPYLQEGMAVMLSVHNGV 121

Query: 193 PLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVVVGDVLVINTEDD 252
           PL+  +P++VT  V E +P +KG  A+   K A L NG+   VPPH+  G  +V+ T D 
Sbjct: 122 PLTIELPQRVTLEVAETEPVLKGQTASSSYKPATLSNGVRTTVPPHIAAGTRVVVMTADG 181

Query: 253 SYIERAK 260
           SY+ERAK
Sbjct: 182 SYVERAK 187

[Close]

BLAST of Sed0010168 vs. ExPASy TrEMBL
Match: A0A6J1HW84 (uncharacterized protein LOC111467432 OS=Cucurbita maxima OX=3661 GN=LOC111467432 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.6e-114
Identity = 223/262 (85.11%), Postives = 239/262 (91.22%), Query Frame = 0


Query: 1   MMRTRLLRQGISRA--LSPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSH 60
           MMR  LLR+GISR   L  S  SS FRSLA+PTT+ SS L D +SSP  P  A+VDGR H
Sbjct: 1   MMRALLLRKGISRTLHLPSSTISSSFRSLAAPTTAFSSSLLDLISSPL-PRPASVDGRCH 60

Query: 61  LLGSLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVES 120
            LGSLWSVI  RGFK HGSDVRVGNII+RKERIYQVTKV+HSHEGRGKATIKVELRDVES
Sbjct: 61  SLGSLWSVIQHRGFKVHGSDVRVGNIIERKERIYQVTKVDHSHEGRGKATIKVELRDVES 120

Query: 121 GNKVTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYL 180
           GNKVTQRLATDESVDRVFVQEK+YIFMC+DRDAK+LLMDPD+YEQLEVPEELFGKAAMYL
Sbjct: 121 GNKVTQRLATDESVDRVFVQEKAYIFMCRDRDAKILLMDPDSYEQLEVPEELFGKAAMYL 180

Query: 181 QDDMKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPH 240
           QDDMKVMVQLFNDTPLSA+VPK+VTCVVKEAQPPMKGIAATPKEKKA+LDNGMT+KVPPH
Sbjct: 181 QDDMKVMVQLFNDTPLSASVPKRVTCVVKEAQPPMKGIAATPKEKKAVLDNGMTLKVPPH 240

Query: 241 VVVGDVLVINTEDDSYIERAKG 261
           VVVGDV+VINTEDDSYIERAKG
Sbjct: 241 VVVGDVVVINTEDDSYIERAKG 261

[Close]

BLAST of Sed0010168 vs. ExPASy TrEMBL
Match: A0A6J1F612 (uncharacterized protein LOC111441152 OS=Cucurbita moschata OX=3662 GN=LOC111441152 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.4e-113
Identity = 223/267 (83.52%), Postives = 238/267 (89.14%), Query Frame = 0


Query: 1   MMRTRLLRQGISRAL-------SPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAV 60
           MMR  LLR+GISR L       S S  SS FRSLA+P T+SSS L D +SSP  P  A+V
Sbjct: 1   MMRALLLRKGISRTLHLPSSTISSSTISSSFRSLAAPITASSSSLLDLISSPL-PRPASV 60

Query: 61  DGRSHLLGSLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVEL 120
           DG  H LGSLWSVI  RGFK HGSDVRVGNII+RKERIYQVTKV+HSHEGRGKATIKVEL
Sbjct: 61  DGPCHSLGSLWSVIQHRGFKVHGSDVRVGNIIERKERIYQVTKVDHSHEGRGKATIKVEL 120

Query: 121 RDVESGNKVTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGK 180
           RDVESGNKVTQRLATDESVDRVFVQEK+YIFMC+DRDAK+LLMDPDTYEQLEVPEELFGK
Sbjct: 121 RDVESGNKVTQRLATDESVDRVFVQEKAYIFMCRDRDAKILLMDPDTYEQLEVPEELFGK 180

Query: 181 AAMYLQDDMKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTI 240
           AAMYLQDDMKVMVQLFNDTPLSA+VPK+VTCVVKEAQPPMKGIAA PKEKKA+LDNGMT+
Sbjct: 181 AAMYLQDDMKVMVQLFNDTPLSASVPKRVTCVVKEAQPPMKGIAAAPKEKKAVLDNGMTL 240

Query: 241 KVPPHVVVGDVLVINTEDDSYIERAKG 261
           KVPPHVVVGDV+VINTEDDSYIERAKG
Sbjct: 241 KVPPHVVVGDVVVINTEDDSYIERAKG 266

[Close]

BLAST of Sed0010168 vs. ExPASy TrEMBL
Match: A0A1S3BRA6 (elongation factor P OS=Cucumis melo OX=3656 GN=LOC103492427 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.2e-109
Identity = 219/260 (84.23%), Postives = 234/260 (90.00%), Query Frame = 0


Query: 1   MMRTRLLRQGISRALSPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSHLL 60
           MMRT LLR+G+S+ALS S  S  F S A    SSSS LSD L+SP     +AVD R HLL
Sbjct: 1   MMRTLLLRKGVSKALS-SPSSINFSSFA----SSSSFLSDFLTSP--QTRSAVDARRHLL 60

Query: 61  GSLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGN 120
           GSLWSVI  RGFK HGSDV+VGNII+RKERI+QVTKV+HSHEGRGKATIKVELRDVESGN
Sbjct: 61  GSLWSVIQHRGFKVHGSDVKVGNIIERKERIFQVTKVDHSHEGRGKATIKVELRDVESGN 120

Query: 121 KVTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQD 180
           KVTQRLATDESVDRVFVQEK+YIFMCKDRDAKVLLMDPDT+EQLEV EELFGKAAMYLQD
Sbjct: 121 KVTQRLATDESVDRVFVQEKAYIFMCKDRDAKVLLMDPDTFEQLEVSEELFGKAAMYLQD 180

Query: 181 DMKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVV 240
           DMKVMVQLFNDTPLSA+VPK+VTCVV EAQPPMKGIAATPKEKKALLDNGMTIKVPPH+V
Sbjct: 181 DMKVMVQLFNDTPLSASVPKRVTCVVTEAQPPMKGIAATPKEKKALLDNGMTIKVPPHIV 240

Query: 241 VGDVLVINTEDDSYIERAKG 261
           VGDV+VINTEDDSYIERAKG
Sbjct: 241 VGDVIVINTEDDSYIERAKG 253

[Close]

BLAST of Sed0010168 vs. ExPASy TrEMBL
Match: A0A6J1D2T1 (uncharacterized protein LOC111016484 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016484 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 8.0e-106
Identity = 208/258 (80.62%), Postives = 223/258 (86.43%), Query Frame = 0


Query: 2   MRTRLLRQGISRALSPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSHLLG 61
           MR  LLR+  SRALSP                 SS ++ S  S   P SA  DGR HLLG
Sbjct: 1   MRALLLRKAFSRALSP----------------PSSAIASSFRSTEFPSSA--DGRCHLLG 60

Query: 62  SLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNK 121
           SLWS+I  RGFK HGSDVRVGNII+RKERI+QVT+V+HSHEGRGKATIKVELRDVESGNK
Sbjct: 61  SLWSLIQHRGFKVHGSDVRVGNIIERKERIFQVTRVDHSHEGRGKATIKVELRDVESGNK 120

Query: 122 VTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDD 181
           VTQRLATDESVDRVFVQEK+YIFMC+DRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDD
Sbjct: 121 VTQRLATDESVDRVFVQEKAYIFMCRDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDD 180

Query: 182 MKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVVV 241
           MKVMVQLFNDTPLSA+VPK+VTCVVKEAQPPMKGIAATPKEKKA+LDNGMTIKVPPHVV+
Sbjct: 181 MKVMVQLFNDTPLSASVPKRVTCVVKEAQPPMKGIAATPKEKKAVLDNGMTIKVPPHVVI 240

Query: 242 GDVLVINTEDDSYIERAK 260
           GDV+VINTEDDSYIERAK
Sbjct: 241 GDVVVINTEDDSYIERAK 240

[Close]

BLAST of Sed0010168 vs. ExPASy TrEMBL
Match: A0A0A0LZ88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599550 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 8.9e-105
Identity = 210/259 (81.08%), Postives = 228/259 (88.03%), Query Frame = 0


Query: 2   MRTRLLRQGISRALSPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSHLLG 61
           MRT LLR+GIS+AL     SSP     S  +SSSS LSD LSSP A   +AVDGR HLLG
Sbjct: 1   MRTLLLRKGISKAL-----SSPSSINFSSFSSSSSSLSDFLSSPQA--RSAVDGRRHLLG 60

Query: 62  SLWSVIPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNK 121
           SLWSVI +RG K HGSDV+VGNII+RK+RI+QVTKV+HSHEGRGKATIKVELRDVESGNK
Sbjct: 61  SLWSVIQRRGVKVHGSDVKVGNIIERKDRIFQVTKVDHSHEGRGKATIKVELRDVESGNK 120

Query: 122 VTQRLATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDD 181
           VTQRLAT+ESVDRVFV EK+YIFMCKDRDAKVLLMDPDTYEQLEV EELFGKAAMYLQDD
Sbjct: 121 VTQRLATNESVDRVFVHEKAYIFMCKDRDAKVLLMDPDTYEQLEVSEELFGKAAMYLQDD 180

Query: 182 MKVMVQLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVVV 241
           MKV VQL+NDTPLSATVPK+VTCVV EAQP M+GI A P+EKKALLDNGMTIKVP H+VV
Sbjct: 181 MKVRVQLYNDTPLSATVPKRVTCVVTEAQPSMQGIQAAPREKKALLDNGMTIKVPAHIVV 240

Query: 242 GDVLVINTEDDSYIERAKG 261
           GDV+VINTEDDSYIERAKG
Sbjct: 241 GDVIVINTEDDSYIERAKG 252

[Close]

BLAST of Sed0010168 vs. TAIR 10
Match: AT4G26310.1 (elongation factor P (EF-P) family protein )

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-51
Identity = 114/251 (45.42%), Postives = 170/251 (67.73%), Query Frame = 0


Query: 8   RQGISRAL-SPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSHLLGSLWSV 67
           R  ISR+L S S  +SP    A  T  S   LS SL S     +      +  L S WS 
Sbjct: 9   RISISRSLFSFSNATSPG---AVTTRRSLYSLSRSLLSSTPYAAGGCCRETPPLHSPWSA 68

Query: 68  IPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNKVTQRL 127
           + +RG K +   +R GN+I+R  R ++V + EH  +GRG A+I+VELRDV++GNK+  R 
Sbjct: 69  LQRRGVKVNAIQLRAGNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRF 128

Query: 128 ATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDDMKVMV 187
            ++ESV++VFV+EKS+  +  + D    L++P+T+EQ+EVP ++FGKAA+YL+++MKV +
Sbjct: 129 GSEESVEKVFVEEKSFTCLYAEGDT-AYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQL 188

Query: 188 QLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIKVPPHVVVGDVLV 247
           QL++   LSA++PK +TC V E Q PMKG+ + P+ K+ALLDNG TI+VP ++  G+ +V
Sbjct: 189 QLYDGRALSASIPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAGEKIV 248

Query: 248 INTEDDSYIER 258
           INTEDDS+++R
Sbjct: 249 INTEDDSFVKR 255

[Close]

BLAST of Sed0010168 vs. TAIR 10
Match: AT4G26310.2 (elongation factor P (EF-P) family protein )

HSP 1 Score: 172.6 bits (436), Expect = 4.3e-43
Identity = 102/228 (44.74%), Postives = 151/228 (66.23%), Query Frame = 0


Query: 8   RQGISRAL-SPSIDSSPFRSLASPTTSSSSPLSDSLSSPFAPPSAAVDGRSHLLGSLWSV 67
           R  ISR+L S S  +SP    A  T  S   LS SL S     +      +  L S WS 
Sbjct: 9   RISISRSLFSFSNATSPG---AVTTRRSLYSLSRSLLSSTPYAAGGCCRETPPLHSPWSA 68

Query: 68  IPQRGFKAHGSDVRVGNIIQRKERIYQVTKVEHSHEGRGKATIKVELRDVESGNKVTQRL 127
           + +RG K +   +R GN+I+R  R ++V + EH  +GRG A+I+VELRDV++GNK+  R 
Sbjct: 69  LQRRGVKVNAIQLRAGNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRF 128

Query: 128 ATDESVDRVFVQEKSYIFMCKDRDAKVLLMDPDTYEQLEVPEELFGKAAMYLQDDMKVMV 187
            ++ESV++VFV+EKS+  +  + D    L++P+T+EQ+EVP ++FGKAA+YL+++MKV +
Sbjct: 129 GSEESVEKVFVEEKSFTCLYAEGDT-AYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQL 188

Query: 188 QLFNDTPLSATVPKKVTCVVKEAQPPMKGIAATPKEKKALLDNGMTIK 235
           QL++   LSA++PK +TC V E Q PMKG+ + P+ K+ALLDNG TI+
Sbjct: 189 QLYDGRALSASIPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQ 232

The following BLAST results are available for this feature:

BLAST of Sed0010168 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529869.1	8.8e-115	85.50	uncharacterized protein LOC111792589 [Cucurbita pepo subsp. pepo]	[more]
XP_022968100.1	3.3e-114	85.11	uncharacterized protein LOC111467432 [Cucurbita maxima]	[more]
XP_022933865.1	2.8e-113	83.52	uncharacterized protein LOC111441152 [Cucurbita moschata]	[more]
KAG6588130.1	6.3e-113	84.35	Mitochondrial dicarboxylate/tricarboxylate transporter DTC, partial [Cucurbita a...	[more]
XP_008451020.1	2.5e-109	84.23	PREDICTED: elongation factor P [Cucumis melo]	[more]

BLAST of Sed0010168 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8IS61	2.7e-34	39.04	Elongation factor P OS=Methylobacterium nodulans (strain LMG 21967 / CNCM I-2342...	[more]
B0UJ99	2.7e-34	38.50	Elongation factor P OS=Methylobacterium sp. (strain 4-46) OX=426117 GN=efp PE=3 ...	[more]
A4YTY9	6.0e-34	36.90	Elongation factor P OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=efp PE=3...	[more]
Q5LU15	1.0e-33	37.63	Elongation factor P OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3...	[more]
B1M2B1	1.8e-33	37.97	Elongation factor P OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1...	[more]

BLAST of Sed0010168 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HW84	1.6e-114	85.11	uncharacterized protein LOC111467432 OS=Cucurbita maxima OX=3661 GN=LOC111467432...	[more]
A0A6J1F612	1.4e-113	83.52	uncharacterized protein LOC111441152 OS=Cucurbita moschata OX=3662 GN=LOC1114411...	[more]
A0A1S3BRA6	1.2e-109	84.23	elongation factor P OS=Cucumis melo OX=3656 GN=LOC103492427 PE=3 SV=1	[more]
A0A6J1D2T1	8.0e-106	80.62	uncharacterized protein LOC111016484 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LZ88	8.9e-105	81.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599550 PE=3 SV=1	[more]

BLAST of Sed0010168 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26310.1	2.5e-51	45.42	elongation factor P (EF-P) family protein	[more]
AT4G26310.2	4.3e-43	44.74	elongation factor P (EF-P) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015365	Elongation factor P, C-terminal	SMART	SM00841	Elong_fact_P_C_2	coord: 202..257 e-value: 4.4E-19 score: 79.4
IPR015365	Elongation factor P, C-terminal	PFAM	PF09285	Elong-fact-P_C	coord: 202..257 e-value: 2.8E-15 score: 55.8
IPR015365	Elongation factor P, C-terminal	CDD	cd05794	S1_EF-P_repeat_2	coord: 202..257 e-value: 2.53783E-16 score: 69.8602
IPR001059	Translation elongation factor P/YeiP, central	SMART	SM01185	EFP_2	coord: 139..194 e-value: 2.1E-11 score: 53.9
IPR001059	Translation elongation factor P/YeiP, central	PFAM	PF01132	EFP	coord: 152..194 e-value: 4.2E-12 score: 45.8
IPR001059	Translation elongation factor P/YeiP, central	CDD	cd04470	S1_EF-P_repeat_1	coord: 139..199 e-value: 6.64756E-16 score: 69.0239
None	No IPR available	GENE3D	2.40.50.140		coord: 202..257 e-value: 5.3E-18 score: 66.5
None	No IPR available	GENE3D	2.40.50.140		coord: 136..199 e-value: 2.8E-17 score: 64.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..49
None	No IPR available	PANTHER	PTHR30053:SF14	ELONGATION FACTOR P (EF-P) FAMILY PROTEIN	coord: 53..257
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 74..134 e-value: 2.8E-16 score: 60.9
IPR013185	Translation elongation factor, KOW-like	PFAM	PF08207	EFP_N	coord: 76..132 e-value: 4.6E-13 score: 49.0
IPR020599	Translation elongation factor P/YeiP	PANTHER	PTHR30053	ELONGATION FACTOR P	coord: 53..257
IPR013852	Translation elongation factor P/YeiP, conserved site	PROSITE	PS01275	EFP	coord: 223..242
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 202..257
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 137..199
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 77..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010168.1	Sed0010168.1	mRNA
Sed0010168.2	Sed0010168.2	mRNA
Sed0010168.3	Sed0010168.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
biological_process	GO:0043043	peptide biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003746	translation elongation factor activity