Sed0010131 (gene) Chayote v1

Overview


Name	Sed0010131
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor AS1
Location	LG04: 26594422 .. 26596184 (+)
RNA-Seq Expression	Sed0010131
Synteny	Sed0010131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTACAGCATTAAATGGGAAGCAACACCCACTTTTTCTCTGCAGCTCTGATTTTGAGCAGTTTGGATGTGTCTCAATCGTCCTTTCTGGCTTTATTATATATATCAAACAGTGACTATTCGAAACCTATTGCTGCTTTGGCTCTGCCCTCACTGTAACAACACCCACTCTTCCTCTCCTCTCTTCCCCCCATATATCCTCTCTCTTCCCTCCATTCTCTCCTTCACACTTTCCCCTTCCCTTTCTAACTCCATTGCTTCTCTTTTCCTTACAAGGTTCCTCTCTTTTGCCTTTACTTCTCTTTCTTCATTCATTCATTCTGTTGTGTTTTTCTTCAGTTTTCTTCTATGGAGGCCAGGTTTTGGGGTAATGTTCAAATGGGTTTTCTTTTGTGACCCTTTTTAAGCTGCTTTTCCACTTGTTTGTAATCATTACTTCCTTGTGGATGCTTTTTCTCTACCTTTTGTCCTCTGCTTGAGTTATTGGCTATTACCTGCATTGTTTGTTTCTTATGCATCCTTCCTGTTTTTACTGCTGTTTATGTCTAGTTTCTTGTTTGGTCGAGGCTCTTGATGGCACAGTAGTAGTTTAGCAGCATCATCTGGTCTGAATTGTTGTATGAACAAAATAGGCCTAGCAGCCTTTGTGCTGATTCTTGTTATTTTATCAGTTTCTTTCCTTAATTTTGTTTCCATTTTGTCATCCTCTTAGTCTTATGATAATTTCTTTTTTGTCATATCTTGAAATCTTTTCAGAGATGGTATAGAGTACAAGGCTTTGGAAAATTTGTAAATGATGCACAGTTATTGATTGGTCCGTGGAGGCTTGAATTCAGCAGTGTGAGTGTAGAGATGCTTATAAATTGTTGAGGAATAGAACAGAAATCATAGTTTAAACCAAGTTATTAGTCTATTCTATCAAACCTTATCTAATGGCCACTTCCAATGGAGGCTTTCTTCAAACTGATTCATCTACTCCACCACCATCTCTTCCTCCATGGCTTTCGAACTCCAACGGTAGCTCTTCGCTCCGACCGCCTTCTCCGTCTGTTGCCTTAACTCTCTCTTCCCCCACAGTTCCAGACTACTCCCCCATCCCCTGGCTGCAGCAGCCAGAGAGAATCCCAGAAAACATGCCTCATATGTTAGGCAATTTAGCACCTCAAATGTCAATGCCATCATGCGGTGGAGGCCTATTTGCTTCCGAGCTCGTTGAATGCTGCCGGGAGCTCGACGAGGGCCACCGTGCTTGGGCAGCACACAAGAAGGAAACAACGTGGAGGTTAAGGAGACAGGAGTTGCAATTGGAGGCGGAGAAGGGGTCCCGAATTCGACAAAAAATGGAGGAGGTTGAAGGAAAAGTGAAGGCTCTTAGAGAAGAAGAGAAGATTGCTTTGGAGAGGATTGAAGCTGAGTATAAGGAACAATTGGCAGGGTTGAGAAAAGATGCAGAGGCTAAAGAACAGAAGTTGGCTGAGCAATGGGCTGCAAAACACTTGAGCCTGACTAAGTTTCTTGAGCATATGGGTTGCAGAACTAGAATTGGTGAGTCCAGTGGGAGGTGAGAAACCAAAAATTTTGCAATTGGCTTTGAATTTCTTTATGGGAAATCCTTCCTTCTCACTTACTCTTTTATATTTGTACTTCCAGTTTGTGTATCTATTGATATCTGAAATTATGCATCAATGTCCTATATTTGCTTTGTATTGATACTCTTACAAAGAAAATGTCAAATATTTTGATACTGACAGTTAAGTTCCTCATCC

mRNA sequence

GTACAGCATTAAATGGGAAGCAACACCCACTTTTTCTCTGCAGCTCTGATTTTGAGCAGTTTGGATGTGTCTCAATCGTCCTTTCTGGCTTTATTATATATATCAAACAGTGACTATTCGAAACCTATTGCTGCTTTGGCTCTGCCCTCACTGTAACAACACCCACTCTTCCTCTCCTCTCTTCCCCCCATATATCCTCTCTCTTCCCTCCATTCTCTCCTTCACACTTTCCCCTTCCCTTTCTAACTCCATTGCTTCTCTTTTCCTTACAAGGTTCCTCTCTTTTGCCTTTACTTCTCTTTCTTCATTCATTCATTCTGTTGTGTTTTTCTTCAGTTTTCTTCTATGGAGGCCAGGTTTTGGGAGATGGTATAGAGTACAAGGCTTTGGAAAATTTGTAAATGATGCACAGTTATTGATTGGTCCGTGGAGGCTTGAATTCAGCAGTGTGAGTGTAGAGATGCTTATAAATTGTTGAGGAATAGAACAGAAATCATAGTTTAAACCAAGTTATTAGTCTATTCTATCAAACCTTATCTAATGGCCACTTCCAATGGAGGCTTTCTTCAAACTGATTCATCTACTCCACCACCATCTCTTCCTCCATGGCTTTCGAACTCCAACGGTAGCTCTTCGCTCCGACCGCCTTCTCCGTCTGTTGCCTTAACTCTCTCTTCCCCCACAGTTCCAGACTACTCCCCCATCCCCTGGCTGCAGCAGCCAGAGAGAATCCCAGAAAACATGCCTCATATGTTAGGCAATTTAGCACCTCAAATGTCAATGCCATCATGCGGTGGAGGCCTATTTGCTTCCGAGCTCGTTGAATGCTGCCGGGAGCTCGACGAGGGCCACCGTGCTTGGGCAGCACACAAGAAGGAAACAACGTGGAGGTTAAGGAGACAGGAGTTGCAATTGGAGGCGGAGAAGGGGTCCCGAATTCGACAAAAAATGGAGGAGGTTGAAGGAAAAGTGAAGGCTCTTAGAGAAGAAGAGAAGATTGCTTTGGAGAGGATTGAAGCTGAGTATAAGGAACAATTGGCAGGGTTGAGAAAAGATGCAGAGGCTAAAGAACAGAAGTTGGCTGAGCAATGGGCTGCAAAACACTTGAGCCTGACTAAGTTTCTTGAGCATATGGGTTGCAGAACTAGAATTGGTGAGTCCAGTGGGAGGTGAGAAACCAAAAATTTTGCAATTGGCTTTGAATTTCTTTATGGGAAATCCTTCCTTCTCACTTACTCTTTTATATTTGTACTTCCAGTTTGTGTATCTATTGATATCTGAAATTATGCATCAATGTCCTATATTTGCTTTGTATTGATACTCTTACAAAGAAAATGTCAAATATTTTGATACTGACAGTTAAGTTCCTCATCC

Coding sequence (CDS)

ATGGCCACTTCCAATGGAGGCTTTCTTCAAACTGATTCATCTACTCCACCACCATCTCTTCCTCCATGGCTTTCGAACTCCAACGGTAGCTCTTCGCTCCGACCGCCTTCTCCGTCTGTTGCCTTAACTCTCTCTTCCCCCACAGTTCCAGACTACTCCCCCATCCCCTGGCTGCAGCAGCCAGAGAGAATCCCAGAAAACATGCCTCATATGTTAGGCAATTTAGCACCTCAAATGTCAATGCCATCATGCGGTGGAGGCCTATTTGCTTCCGAGCTCGTTGAATGCTGCCGGGAGCTCGACGAGGGCCACCGTGCTTGGGCAGCACACAAGAAGGAAACAACGTGGAGGTTAAGGAGACAGGAGTTGCAATTGGAGGCGGAGAAGGGGTCCCGAATTCGACAAAAAATGGAGGAGGTTGAAGGAAAAGTGAAGGCTCTTAGAGAAGAAGAGAAGATTGCTTTGGAGAGGATTGAAGCTGAGTATAAGGAACAATTGGCAGGGTTGAGAAAAGATGCAGAGGCTAAAGAACAGAAGTTGGCTGAGCAATGGGCTGCAAAACACTTGAGCCTGACTAAGTTTCTTGAGCATATGGGTTGCAGAACTAGAATTGGTGAGTCCAGTGGGAGGTGA

Protein sequence

MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQPERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRRQELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKLAEQWAAKHLSLTKFLEHMGCRTRIGESSGR

Homology

[Close]

BLAST of Sed0010131 vs. NCBI nr
Match: XP_038903104.1 (transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription factor AS1-like [Benincasa hispida])

HSP 1 Score: 385.6 bits (989), Expect = 2.8e-103
Identity = 199/210 (94.76%), Postives = 202/210 (96.19%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNG SSLRPPSPSV LTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           PERIPENMP +LGNLAPQMSMPSCGG LFASELVECCREL+EGHRAWAAHKKET WRLRR
Sbjct: 61  PERIPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELNEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSGR 211
           AEQWAAKHLSLTKFLEHMGCRTRI ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Sed0010131 vs. NCBI nr
Match: XP_008442545.1 (PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription factor AS1 [Cucumis melo var. makuwa] >TYK25044.1 transcription factor AS1 [Cucumis melo var. makuwa])

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101
Identity = 194/210 (92.38%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNG SSLRPPSPSV LTLSSPTVP Y+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           P+R+PEN+P +LGNLAPQMSMPSCGG LFASELVECCRELDEGHRAWAAHKKET WRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRI ESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Sed0010131 vs. NCBI nr
Match: KAG6596407.1 (E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379.0 bits (972), Expect = 2.6e-101
Identity = 194/210 (92.38%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN SSSLRPPSPSV LTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           PERIPE MP +LGN+APQM+MPSCGG LFASELVECCRELDEGHRAWA+HKKET WRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIRQKMEEVEGKVKA+REEEKIALERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSGR 211
           AEQWAAKHLSLTKFLEHMGCRT+I ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of Sed0010131 vs. NCBI nr
Match: XP_022948252.1 (transcription factor AS1-like [Cucurbita moschata] >XP_022948253.1 transcription factor AS1-like [Cucurbita moschata] >XP_022971572.1 transcription factor AS1-like [Cucurbita maxima] >XP_022971573.1 transcription factor AS1-like [Cucurbita maxima] >XP_023540705.1 transcription factor AS1-like [Cucurbita pepo subsp. pepo] >XP_023540706.1 transcription factor AS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.0 bits (972), Expect = 2.6e-101
Identity = 194/210 (92.38%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN SSSLRPPSPSV LTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           PERIPE MP +LGN+APQM+MPSCGG LFASELVECCRELDEGHRAWA+HKKET WRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIRQKMEEVEGKVKA+REEEKIALERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSGR 211
           AEQWAAKHLSLTKFLEHMGCRT+I ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of Sed0010131 vs. NCBI nr
Match: KAG7027949.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.5 bits (968), Expect = 7.6e-101
Identity = 193/209 (92.34%), Postives = 200/209 (95.69%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN SSSLRPPSPSV LTLSSPTVP YSPIPWLQQ
Sbjct: 13  MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 72

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           PERIPE MP +LGN+APQM+MPSCGG LFASELVECCRELDEGHRAWA+HKKET WRLRR
Sbjct: 73  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 132

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIRQKMEEVEGKVKA+REEEKIALERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 133 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 192

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSG 210
           AEQWAAKHLSLTKFLEHMGCRT+I ESSG
Sbjct: 193 AEQWAAKHLSLTKFLEHMGCRTKISESSG 221

[Close]

BLAST of Sed0010131 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.9e-55
Identity = 124/210 (59.05%), Postives = 150/210 (71.43%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSNGSSSLRPPSPSVALTLSSPTV---PDYSPI 60
           MA SNGGFL ++    PP+  +PPWL+ SN  +++    PSV LTLS  TV       PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWLQQPERIPENMPHMLGNLAPQMSMPSCGG---GLFASELVECCRELDEGHRAWAAHKK 120
           PWLQQ +  PE   +  G L     MPSC G    +F SELVECCREL+EGHRAWA HKK
Sbjct: 216 PWLQQQQ--PERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKK 275

Query: 121 ETTWRLRRQELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKD 180
           E  WRLRR ELQLE+EK  R R+KMEE+E K+KALREE+K A+E+IE EY+EQL GLR+D
Sbjct: 276 EAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRD 335

Query: 181 AEAKEQKLAEQWAAKHLSLTKFLE-HMGCR 202
           AEAK+QKLA+QW ++H+ LTKFLE  MGCR
Sbjct: 336 AEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

[Close]

BLAST of Sed0010131 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-37
Identity = 95/186 (51.08%), Postives = 124/186 (66.67%), Query Frame = 0


Query: 18  PSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQPERIPENMPHMLGNLAP 77
           P LPPW+S+S  SSS    SPSV L+L+S  V   +P P                   AP
Sbjct: 163 PILPPWMSSSPSSSS----SPSVTLSLASAAV---APAP------------------AAP 222

Query: 78  QMSMPSCGGG-LFASELVECCRELDEGHRAWAAHKKETTWRLRRQELQLEAEKGSRIRQK 137
             +    GGG +  +EL+ECCRE++EG RAWAAH+KE  WR++R E+QLE E+  R R+ 
Sbjct: 223 PPTWGGGGGGEVVVAELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRREA 282

Query: 138 MEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKLAEQWAAKHLSLTKFLE 197
            EE E K++ALREE+  A+ER+EAEY+E++AGLR+DAEAKEQK+AEQWAAKH  L KFL+
Sbjct: 283 TEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKFLD 323

Query: 198 HM-GCR 202
            +  CR
Sbjct: 343 QVAACR 323

[Close]

BLAST of Sed0010131 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.3e-34
Identity = 91/208 (43.75%), Postives = 124/208 (59.62%), Query Frame = 0


Query: 18  PSLPPWLSNSNGSSSL----------RPPSPSVALTLSSPTVPDYSPIPWLQQPERIPEN 77
           P LPPWLS++ G ++           RPPSPSV L+L+S  V    P P    P+R   +
Sbjct: 160 PVLPPWLSSNAGPAAAAAAAVAHPPPRPPSPSVTLSLASAAVAPGPPAPAPWMPDRAAAD 219

Query: 78  -------MPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 137
                   P   G  AP       G  L  +EL ECCREL+EG RAWAAH++E  WRL+R
Sbjct: 220 AAPYGFPSPSQHGGAAPPGMAVVDGQAL--AELAECCRELEEGRRAWAAHRREAAWRLKR 279

Query: 138 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 197
            E QLE E+  R R+  EE E K++ +R E+  A ER+E +++E++A LR+DA+ KE+K+
Sbjct: 280 VEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVKEEKM 339

Query: 198 AEQWAAKHLSLTKFLEHMGCRTRIGESS 209
           AEQWAAKH  + KF+E MG  +R   S+
Sbjct: 340 AEQWAAKHARVAKFVEQMGGCSRSWSSA 365

[Close]

BLAST of Sed0010131 vs. ExPASy TrEMBL
Match: A0A5D3DN74 (Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001650 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.7e-102
Identity = 194/210 (92.38%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNG SSLRPPSPSV LTLSSPTVP Y+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           P+R+PEN+P +LGNLAPQMSMPSCGG LFASELVECCRELDEGHRAWAAHKKET WRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRI ESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Sed0010131 vs. ExPASy TrEMBL
Match: A0A1S3B5G1 (transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.7e-102
Identity = 194/210 (92.38%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNG SSLRPPSPSV LTLSSPTVP Y+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           P+R+PEN+P +LGNLAPQMSMPSCGG LFASELVECCRELDEGHRAWAAHKKET WRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRI ESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Sed0010131 vs. ExPASy TrEMBL
Match: A0A6J1I2B9 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 194/210 (92.38%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN SSSLRPPSPSV LTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           PERIPE MP +LGN+APQM+MPSCGG LFASELVECCRELDEGHRAWA+HKKET WRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIRQKMEEVEGKVKA+REEEKIALERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSGR 211
           AEQWAAKHLSLTKFLEHMGCRT+I ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of Sed0010131 vs. ExPASy TrEMBL
Match: A0A6J1G8P0 (transcription factor AS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451947 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 194/210 (92.38%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN SSSLRPPSPSV LTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           PERIPE MP +LGN+APQM+MPSCGG LFASELVECCRELDEGHRAWA+HKKET WRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIRQKMEEVEGKVKA+REEEKIALERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSGR 211
           AEQWAAKHLSLTKFLEHMGCRT+I ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of Sed0010131 vs. ExPASy TrEMBL
Match: A0A0A0LAJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 193/210 (91.90%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGSSSLRPPSPSVALTLSSPTVPDYSPIPWLQQ 60
           MATSNGGFLQTDSST PPSLPPWLSNSNG SSLRPPSPSV LTLSSPTVP Y+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTSPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PERIPENMPHMLGNLAPQMSMPSCGGGLFASELVECCRELDEGHRAWAAHKKETTWRLRR 120
           P+R+PENMP +LGNLAPQMSMPSCGG LFASELVECCRELDEGHRAWAAHKKET WRLRR
Sbjct: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLE+EK SRIR KMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRLKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIGESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRI ESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Sed0010131 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-56
Identity = 124/210 (59.05%), Postives = 150/210 (71.43%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSNGSSSLRPPSPSVALTLSSPTV---PDYSPI 60
           MA SNGGFL ++    PP+  +PPWL+ SN  +++    PSV LTLS  TV       PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWLQQPERIPENMPHMLGNLAPQMSMPSCGG---GLFASELVECCRELDEGHRAWAAHKK 120
           PWLQQ +  PE   +  G L     MPSC G    +F SELVECCREL+EGHRAWA HKK
Sbjct: 216 PWLQQQQ--PERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKK 275

Query: 121 ETTWRLRRQELQLEAEKGSRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKD 180
           E  WRLRR ELQLE+EK  R R+KMEE+E K+KALREE+K A+E+IE EY+EQL GLR+D
Sbjct: 276 EAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRD 335

Query: 181 AEAKEQKLAEQWAAKHLSLTKFLE-HMGCR 202
           AEAK+QKLA+QW ++H+ LTKFLE  MGCR
Sbjct: 336 AEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

The following BLAST results are available for this feature:

BLAST of Sed0010131 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903104.1	2.8e-103	94.76	transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription ...	[more]
XP_008442545.1	1.2e-101	92.38	PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription f...	[more]
KAG6596407.1	2.6e-101	92.38	E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022948252.1	2.6e-101	92.38	transcription factor AS1-like [Cucurbita moschata] >XP_022948253.1 transcription...	[more]
KAG7027949.1	7.6e-101	92.34	Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0010131 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80931	2.9e-55	59.05	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
Q94IB1	1.2e-37	51.08	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q9S7B2	8.3e-34	43.75	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]

BLAST of Sed0010131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN74	5.7e-102	92.38	Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B5G1	5.7e-102	92.38	transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1	[more]
A0A6J1I2B9	1.3e-101	92.38	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 S...	[more]
A0A6J1G8P0	1.3e-101	92.38	transcription factor AS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451947 PE=4...	[more]
A0A0A0LAJ9	1.1e-100	91.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1	[more]

BLAST of Sed0010131 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	2.1e-56	59.05	myb-like HTH transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..183
None	No IPR available	COILS	Coil	Coil	coord: 130..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 18..210
IPR031055	Protein rough sheath 2 /ASYMMETRIC LEAVES1	PANTHER	PTHR47214:SF3	TRANSCRIPTION FACTOR AS1	coord: 18..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010131.1	Sed0010131.1	mRNA
Sed0010131.2	Sed0010131.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010338	leaf formation
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus