Sed0010108 (gene) Chayote v1

Overview


Name	Sed0010108
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CRS2-associated factor 1, mitochondrial
Location	LG12: 1210820 .. 1214865 (+)
RNA-Seq Expression	Sed0010108
Synteny	Sed0010108

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGATTCTTCTGAAACAAAAGCCTCTCTAAATCTCAACCGAGTTCGCTGATAAACCCTAAACCCTTCCGGTCGCCGGCCATTGTTCATCCATGCTCTTCAATCTGCCTCATGTTCGCTATCAGATTGTTCCGCGAAAATCCAATCCCGTTTCTTCATCCTCTTTCACCGTCCAATCGATTTCTCTTCTACTCCAAACTCCGCGATCACTACGCCTTTGAATCCCCGCCTCCCCTCCCCCCAAAACCGCCGTCGCCGGAGCCAAAACCCCATCCAAACAAACCTCCAAAGCCGCGGTACAAGCCGCCGTCGTCGCTCGACCTCGACGACAAGAAGCCCCGGCATTCTGCTATGCCGTTCGATTTCCAGTACAGTTACACGGAGACTAGCCCCTTGGCGAGGCCAATTGGGCTTCGAGAGCCGAAGTTCTCGCCGTTCGGGCCGGGGCGCCTTGATCGGGTATGGACCGGGGTGTGTGCACCCGCGGTGGACCCGAAGGCGAGCTCTGTAGAGGGCAGGGAAGATCCGAAACTGGAAGAGAAGAGGAGGGTCATTAGGGAGAATATTCAAGGGGAGCCTTTGACTGGAGCTGAAAGGAAGGCCTTGGTGGAAAAGTGTCAAAAGAACAAAACGAAGAAGCAGGTTAATTTGGGTATGTGTGATGAAATTGTAAACAAAGATTGGAAATTTGGTTGTTTGATCCAACTATTGTTGAATTTTGTGAACAAGTATCAGATATGAAAATTTAGGTGGGTATATGTTTTTTTTTCTTTCTAATGGGTTGTTCAATGTTTGCCGTATAGACATTTTTTTTTTGTTATTTTCGCCTTTTCATGTCTGTGAGTGTCCAAGTCAACTTACTATATGTCCTCATTCTACGACATTTGGATGTCGAGAAAGCCGGTAGTAAATTAATAATTAGGTAGGTGGTCACCCTGGATTGAACACATCACCTACTTTACTGAGGGTGTGTTTGGGCCCCATTTATGTAAACGGCTGAGTTGGTTATAATAACTCAACCGATGTTTGCCCCACCGTTTATTATAAACGGTATTACCTAAACCTACGTGCCCATTTCTATCTTAACCTTACATATATTACTTTTTGTTACATAACCAGCCCCTTAAACACTATTTATCATAATCCCCGTTATAATAACTTGCCCCTCAAACGCCATTTATAATAACCCACTATTTTTTATAACCCACCATTTATCATAATTTTTCGTCTATCATAACAAAATCGGTACTCCAAACACACCCTTAAGGAACCCATCCGAAAGCAATTGCTAGGTAGGTGAGTATTTTCGTTGTATCAGACAATTTTAGTTGGTTTTCAAACAGGATTATGTACTTTGGGCAGTGTTCATGAGAAAATTGTGGAAAGGAGTTCTTAAGAAATATTTAGATCAAAGAGTGAGCATTTGCATACTGATTTGCTATTGTCCATGTTCAAGATGTTATTTCTTGAACTTTTTTCTGTTTGCCGTTATTTTTATGGCTGATTGGGAATATCATCCTACCCTTCTCACCAATGACTGAACAATGAGGTTTATAGAAATATTGACAGGTTGATTGGTATATTATTCTATGATTATAAACACATAATTATGTTAATTTTTCTCTGATAAGTTGATGTAGTTATAAGATTATCTCGTTTGCTGTGCTTATATAACTGAGAAAACTTATAACCCAATTTGTTGTTATTTCTTTTTATCTTAATCCTGTAACTTCTATGTGATTTTAGGAAGAGATGGTTTGACTCACAATATGTTAAATGATATTTATAATAACTGGAAACATGCTGAAGCAGTGAGGATCAAATGTCTAGGTGTGCCCACTGTTGATATGAAAAATGTGTGCACACAGCTTGAGGTATGACTTTCATTTCTTTGGATTGCTCGAGTCGTCTTGCCTTAGACGTTTTAGTTCCTTCATTTATTAAGCTATTGAATCTTTTCTACGAATTAGTAACTAGAAATTAGAGTTTTTCCCTACTATATACCCAAGAACCCGCTCCGTCCCAAATTATATTCAATGTATTGAAAATGTATTTTGAGTCACATCCTTTGACATTTGTTTAGATATTCTATGGGATGGTAACTACAAGGATAATAAGAAATCAAAAAGTTGTGGGTTCAATCCATGGTGGTCATCTACTTATGAATTAATTTCCTACGGCTTTCCTTGATTTTCAAATGTTGTAGGGTTAAACAGTATATCCCATGAGAATAGTCGAGGTGTGCACAAGCTGGCCCGAACACTTCAACTGTTTTTTCTTCGTTTAATTTGAGCTTTGTTGATTCCATGCAGGACAAAACCAATGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTCCTATATAGAGGGAGGTATTATAATCCCAAGAAAAGGCCATTCATTCCCCTGATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACAATTGATGGTCTAAGCATTGAGGAAACAAAAGAAATGAGAAAGAAAGGACTGGCTGTTCCTGCTTTGACAAGACTCGGTATGTGATTCGAACTCTTTTACCTTGTTTTCAGTAATTTCCGTATCGTCATGAAGTCGTTGTCTTACTCATTATGCTTGTGGACTTCAGCAAAGAATGGTTACTATGGTAGTTTGGTTCCCATGGTTCGAGACGCTTTTCTCTCCTGCGAGCTGGTTCGGATTGACTGCAAGGGTCTCGAGAGGAGTGATTACAAGAAAATAGGCTGCAAGCTTCGGGTAATGCCCATTTCCCTTATGGCTTTTTAAAAAAAATAAAAATTATTCGTACTTTTTCTACATGATAGAAAGAAATGAAGAAGGGACCTTATAATGTGAGGAGTGTTACTCTTCATATTTACATAGTGCAAGGGGGGAATACTGGGGAGTAGAATAGAGGACAATCTTAAATAAATTTTATGTTTTTTTTTTAATTTGGGAAATCGGAGACTCGCTCCACTATACCTGTAGTAACTACGCTTGTCTCTAAGTCAAGCACCGAAAGACATCAAAGGAATGGAGACACAGAAGATGTCTACAAATTAATGTCATAGGTGGTTCCGAACTTGGATTCTTGAAGGAAGCACACCTTCAAAACCCAAGTCTTTGATCACCATGCCACCCCTTGGGGACAAATAAATTTTATTTTTTACTCGAGCTTTCTGAATTTTCAGTTATTCGAACAAAAGAAAAAAGAAAAAAACCATCATGCCAACCTAGTGGTAGAAAGAGGATTTTTGGAATTCAAGAGGTCGAAAATATTTCCTTGATATCAAAATGTTGTAGGGTGAGCCAGGATATATGTCCATAAACGTAAAAAAAAAAGTTTCTAAGTTTCCAACAGAGTAAATTGAGGTTTTAGATTTTTGTTTGATGGCATCATTCATTGGTGTTAAGAAATTATTCTTGTGCCAAAAAATTGAATTCGTTCCATTTTGGATCAACTTTCCTTGTTAATTCAGGACCTTGTACCATGTATCTTGGTGACTTTTGAGAAAGAGCAGATTGTAATTTGGAGGGGAAAGGATTACAAGCCCTTGGTCTCTGAAGGCTTTCTTACAGTTAGAGAATCCTTTGATGATGCCGGTGACAATACAAACCACGTCGACGACGACGACGACAATTTCGACGGCGGTTTTTACTCGGGTGATAGCGAGTAGGACCTTATGGTTCCTATCACAATCAAATCAGTAATAAACCAACCTACTACTAATTGTCACATCTTTTGAACCAGTGGTTTTGTTTACCAGGCTACATATTTATTTTGCAGCAGAACAAAGTTTCAAAGACTAGGGACCTGTGCTAACAAGAGCCGAGCTCAACTGGATGCGGATGCGTGACCTGATAACCGGGTTCGAATCCTCCTACCCTTAATTATTATTGTTGAATTAAAAAAATCCAGGCCCTGTGCAAAAATGACTTTCTACATACTTAGAAGTATTTTTAAGTGCCAGAGATTACCACATTGCCCAATCTTTTAGATAACTCATTCTTGTGTTCTTCCTTGGAAGAGGAGGAAGGGAAATCCTGT

mRNA sequence

CCTGATTCTTCTGAAACAAAAGCCTCTCTAAATCTCAACCGAGTTCGCTGATAAACCCTAAACCCTTCCGGTCGCCGGCCATTGTTCATCCATGCTCTTCAATCTGCCTCATGTTCGCTATCAGATTGTTCCGCGAAAATCCAATCCCGTTTCTTCATCCTCTTTCACCGTCCAATCGATTTCTCTTCTACTCCAAACTCCGCGATCACTACGCCTTTGAATCCCCGCCTCCCCTCCCCCCAAAACCGCCGTCGCCGGAGCCAAAACCCCATCCAAACAAACCTCCAAAGCCGCGGTACAAGCCGCCGTCGTCGCTCGACCTCGACGACAAGAAGCCCCGGCATTCTGCTATGCCGTTCGATTTCCAGTACAGTTACACGGAGACTAGCCCCTTGGCGAGGCCAATTGGGCTTCGAGAGCCGAAGTTCTCGCCGTTCGGGCCGGGGCGCCTTGATCGGGTATGGACCGGGGTGTGTGCACCCGCGGTGGACCCGAAGGCGAGCTCTGTAGAGGGCAGGGAAGATCCGAAACTGGAAGAGAAGAGGAGGGTCATTAGGGAGAATATTCAAGGGGAGCCTTTGACTGGAGCTGAAAGGAAGGCCTTGGTGGAAAAGTGTCAAAAGAACAAAACGAAGAAGCAGGTTAATTTGGGAAGAGATGGTTTGACTCACAATATGTTAAATGATATTTATAATAACTGGAAACATGCTGAAGCAGTGAGGATCAAATGTCTAGGTGTGCCCACTGTTGATATGAAAAATGTGTGCACACAGCTTGAGGACAAAACCAATGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTCCTATATAGAGGGAGGTATTATAATCCCAAGAAAAGGCCATTCATTCCCCTGATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACAATTGATGGTCTAAGCATTGAGGAAACAAAAGAAATGAGAAAGAAAGGACTGGCTGTTCCTGCTTTGACAAGACTCGCAAAGAATGGTTACTATGGTAGTTTGGTTCCCATGGTTCGAGACGCTTTTCTCTCCTGCGAGCTGGTTCGGATTGACTGCAAGGGTCTCGAGAGGAGTGATTACAAGAAAATAGGCTGCAAGCTTCGGGACCTTGTACCATGTATCTTGGTGACTTTTGAGAAAGAGCAGATTGTAATTTGGAGGGGAAAGGATTACAAGCCCTTGGTCTCTGAAGGCTTTCTTACAGTTAGAGAATCCTTTGATGATGCCGGTGACAATACAAACCACGTCGACGACGACGACGACAATTTCGACGGCGGTTTTTACTCGGGTGATAGCGAGTAGGACCTTATGGTTCCTATCACAATCAAATCACAGAACAAAGTTTCAAAGACTAGGGACCTGTGCTAACAAGAGCCGAGCTCAACTGGATGCGGATGCGTGACCTGATAACCGGGTTCGAATCCTCCTACCCTTAATTATTATTGTTGAATTAAAAAAATCCAGGCCCTGTGCAAAAATGACTTTCTACATACTTAGAAGTATTTTTAAGTGCCAGAGATTACCACATTGCCCAATCTTTTAGATAACTCATTCTTGTGTTCTTCCTTGGAAGAGGAGGAAGGGAAATCCTGT

Coding sequence (CDS)

ATGTTCGCTATCAGATTGTTCCGCGAAAATCCAATCCCGTTTCTTCATCCTCTTTCACCGTCCAATCGATTTCTCTTCTACTCCAAACTCCGCGATCACTACGCCTTTGAATCCCCGCCTCCCCTCCCCCCAAAACCGCCGTCGCCGGAGCCAAAACCCCATCCAAACAAACCTCCAAAGCCGCGGTACAAGCCGCCGTCGTCGCTCGACCTCGACGACAAGAAGCCCCGGCATTCTGCTATGCCGTTCGATTTCCAGTACAGTTACACGGAGACTAGCCCCTTGGCGAGGCCAATTGGGCTTCGAGAGCCGAAGTTCTCGCCGTTCGGGCCGGGGCGCCTTGATCGGGTATGGACCGGGGTGTGTGCACCCGCGGTGGACCCGAAGGCGAGCTCTGTAGAGGGCAGGGAAGATCCGAAACTGGAAGAGAAGAGGAGGGTCATTAGGGAGAATATTCAAGGGGAGCCTTTGACTGGAGCTGAAAGGAAGGCCTTGGTGGAAAAGTGTCAAAAGAACAAAACGAAGAAGCAGGTTAATTTGGGAAGAGATGGTTTGACTCACAATATGTTAAATGATATTTATAATAACTGGAAACATGCTGAAGCAGTGAGGATCAAATGTCTAGGTGTGCCCACTGTTGATATGAAAAATGTGTGCACACAGCTTGAGGACAAAACCAATGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTCCTATATAGAGGGAGGTATTATAATCCCAAGAAAAGGCCATTCATTCCCCTGATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACAATTGATGGTCTAAGCATTGAGGAAACAAAAGAAATGAGAAAGAAAGGACTGGCTGTTCCTGCTTTGACAAGACTCGCAAAGAATGGTTACTATGGTAGTTTGGTTCCCATGGTTCGAGACGCTTTTCTCTCCTGCGAGCTGGTTCGGATTGACTGCAAGGGTCTCGAGAGGAGTGATTACAAGAAAATAGGCTGCAAGCTTCGGGACCTTGTACCATGTATCTTGGTGACTTTTGAGAAAGAGCAGATTGTAATTTGGAGGGGAAAGGATTACAAGCCCTTGGTCTCTGAAGGCTTTCTTACAGTTAGAGAATCCTTTGATGATGCCGGTGACAATACAAACCACGTCGACGACGACGACGACAATTTCGACGGCGGTTTTTACTCGGGTGATAGCGAGTAG

Protein sequence

MFAIRLFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPKPRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTGVCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNLGRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVLYRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWRGKDYKPLVSEGFLTVRESFDDAGDNTNHVDDDDDNFDGGFYSGDSE

Homology

[Close]

BLAST of Sed0010108 vs. NCBI nr
Match: XP_022924354.1 (CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 700.3 bits (1806), Expect = 9.9e-198
Identity = 349/413 (84.50%), Postives = 367/413 (88.86%), Query Frame = 0


Query: 1   MFAIRLFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPK 60
           MF IRLFR+NPIPF HP +PSNR   YSKLRDHYAFESPP L PKPP PE KP  NKP K
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTG 120
           PRYKPPSSLDL DKKP+HS +PFDFQYSYTETS   RPIGLREPKFSPFGPGRLDR WTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNL 180
           VCAPAVDPK SS+E  EDPKLEEKRRV+ ENIQGEPLTGAERK LVE CQK KTK+Q+NL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYN+WKHAEAVRIKCLGVPTVDMKNVCTQLE+KT GKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI ETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWR 360
           NGYYGSLVPMVRDAFLSCELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTFEKEQIV+WR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYKPLVSEGFLTVRESFDDAGDNTNHVDDDDDN-------FDGGFYSGDSE 407
           GKDY+P  SE FLTVRESFDD   NTN VD+DDDN        D GF SG++E
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNQNFDDECSDSGFQSGNNE 413

[Close]

BLAST of Sed0010108 vs. NCBI nr
Match: XP_023526250.1 (CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 698.7 bits (1802), Expect = 2.9e-197
Identity = 349/413 (84.50%), Postives = 366/413 (88.62%), Query Frame = 0


Query: 1   MFAIRLFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPK 60
           MF IRLFR+NPIPF HP +PSNR   YSKLRDHYAFESPP L PKPP PE KP  NKP K
Sbjct: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTG 120
           PRYKPPSSLDL DKKP+HS +PFDFQYSYTETS   RPIGLREPKFSPFGPGRLDR WTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNL 180
           VCAPAVDPK SS+E  EDPKLEEKRRV+ ENIQGEPLTGAERK LVE CQK KTK+Q+NL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYN+WKHAEAVRIKCLGVPTVDMKNVCTQLE+KT GKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI ETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWR 360
           NGYYGSLVPMVRDAFL CELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTFEKEQIV+WR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYKPLVSEGFLTVRESFDDAGDNTNHVDDDDDN-------FDGGFYSGDSE 407
           GKDY+P  SE FLTVRESFDD   NTN VD+DDDN        D GF SG++E
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE 413

[Close]

BLAST of Sed0010108 vs. NCBI nr
Match: KAG7018963.1 (CRS2-associated factor 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 696.8 bits (1797), Expect = 1.1e-196
Identity = 347/409 (84.84%), Postives = 366/409 (89.49%), Query Frame = 0


Query: 1   MFAIRLFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPK 60
           MF IRLFR+NPIPF HP +PSNR   YSKLRDHYAFESPP L PKPP PE KP  NKP K
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTG 120
           PRYKPPSSLDL DKKP+HS +PFDFQYSYTETS   RPIGLREPKFSPFGPGRLDR WTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNL 180
           VCAPAV+PK SS+E  EDPKLEEKRRV+ ENIQGEPLTGAERKALVE CQ+ KTK+Q+NL
Sbjct: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYN+WKHAEAVRIKCLGVPTVDMKNVCTQLEDKT GKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI ETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWR 360
           NGYYGSLVPMVRDAFL CELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTFEKEQIV+WR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYKPLVSEGFLTVRESFDDAGDNTNHVDD---DDDNFDGGFYSGDSE 407
           GKDY+P  SE FLTVRESFDD   NTN VD+   DD+  D GF SG+SE
Sbjct: 361 GKDYRPSESECFLTVRESFDDVDGNTNCVDNENFDDECSDAGFQSGNSE 409

[Close]

BLAST of Sed0010108 vs. NCBI nr
Match: XP_022980305.1 (CRS2-associated factor 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 695.7 bits (1794), Expect = 2.4e-196
Identity = 344/400 (86.00%), Postives = 362/400 (90.50%), Query Frame = 0


Query: 1   MFAIRLFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPK 60
           MF IRLFR++PIPF HP +PSNR   YSKLRDHYAFESPP L PKPP PE KP  NKP K
Sbjct: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTG 120
           PRYKPPSSLDL DKKP+HS +PFDFQYSYTETS L RPIGLREPKFSPFGPGRLDR WTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNL 180
           VCAPAVDPKASS+E  EDPKLEEKRRV+ ENIQGEPLTGAERKALVE CQK KTK+Q+NL
Sbjct: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYN+WKHAEAVRIKCLGVPTVDMKNVCTQLE+KT GKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWR 360
           NGYYGSLVPMVRDAFLSCELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTFEKEQIV+WR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYKPLVSEGFLTVRESFDDAGDNTNHVDDDDDNFDGGF 401
           GKDY+P  SE FL+VRESFDD   NT  VD DDD  D  F
Sbjct: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENF 400

[Close]

BLAST of Sed0010108 vs. NCBI nr
Match: KAG6582581.1 (CRS2-associated factor 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 695.3 bits (1793), Expect = 3.2e-196
Identity = 346/409 (84.60%), Postives = 366/409 (89.49%), Query Frame = 0


Query: 1   MFAIRLFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPK 60
           MF IRLFR+NPIPF HP +PSNR   YSKLRDHYAFESPP L PKPP PE KP  NKP K
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTG 120
           PRYKPPSSLDL DKKP+HS +PFDFQYSYTETS   RPIGLREPKFSPFGPGRLDR WTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNL 180
           VCAPAV+PK SS+E  EDPKLEEKRRV+ ENIQGEPLTGAERKALVE CQ+ KTK+Q+NL
Sbjct: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVL 240
           GRDGLTHNMLNDI+N+WKHAEAVRIKCLGVPTVDMKNVCTQLEDKT GKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIFNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI ETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWR 360
           NGYYGSLVPMVRDAFL CELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTFEKEQIV+WR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYKPLVSEGFLTVRESFDDAGDNTNHVDD---DDDNFDGGFYSGDSE 407
           GKDY+P  SE FLTVRESFDD   NTN VD+   DD+  D GF SG+SE
Sbjct: 361 GKDYRPSESECFLTVRESFDDVDGNTNCVDNENFDDECSDAGFQSGNSE 409

[Close]

BLAST of Sed0010108 vs. ExPASy Swiss-Prot
Match: Q8VYD9 (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 2.4e-146
Identity = 266/370 (71.89%), Postives = 301/370 (81.35%), Query Frame = 0


Query: 1   MFAIRLFRENPIPF-LHPLSPSNRFLFYSKLRDHYAFESPPPL---PPKPPSPEPKPHPN 60
           MF IRL R NP  F L      ++ +  S+LRD Y F+SPPPL     + P    K +  
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISSSRLRDLYNFQSPPPLSSSASENPDFNQKNNNK 60

Query: 61  KPPKPRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDR 120
           K PKP+Y+PPSS  L+  K  HS +PFDF++SYTE+    RPIGLREPK+SPFGP RLDR
Sbjct: 61  KKPKPQYRPPSS--LEGVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDR 120

Query: 121 VWTGVCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKK 180
            WTGVCAPAV+PK  SV+G EDPKLEEKRR +RE IQG  LT AERK LVE CQ+NKTK+
Sbjct: 121 EWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKR 180

Query: 181 QVNLGRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGG 240
           QVNLGRDGLTHNMLND+YN+WKHAEAVR+KCLGVPT+DMKNV   LEDKT G+++ +H G
Sbjct: 181 QVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSG 240

Query: 241 FLVLYRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALT 300
            LVLYRGR Y+PKKRP IPLMLW+PHEP+YPRLIKTTIDGLSI+ETK MRKKGLAVPALT
Sbjct: 241 TLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALT 300

Query: 301 RLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQI 360
           +LAKNGYYGSLVPMVRDAFL  ELVRIDC GLER DYKKIG KLRDLVPCILVTF+KEQ+
Sbjct: 301 KLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQV 360

Query: 361 VIWRGKDYKP 367
           VIWRGKDYKP
Sbjct: 361 VIWRGKDYKP 368

[Close]

BLAST of Sed0010108 vs. ExPASy Swiss-Prot
Match: Q6Z4U2 (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 8.3e-131
Identity = 245/390 (62.82%), Postives = 290/390 (74.36%), Query Frame = 0


Query: 17  PLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPKPRYKPPSSLDLDDKKP 76
           P  PS R L  S L D Y F  P  L P   S +      +P KP Y+PPSSLD   +  
Sbjct: 14  PRRPSVRRL--SGLLDRYGFVPPASLTPHSASDDGGAKKRRPKKPPYRPPSSLDRGGRPA 73

Query: 77  RHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTGVCAPAVDPKASSVEGR 136
             S +PFDF++SYTE+SP  +PIGLREPK+SPFGPGRLDR WTG+CAPAVD         
Sbjct: 74  ARSDLPFDFRFSYTESSPGDKPIGLREPKYSPFGPGRLDRPWTGLCAPAVDTTLRDAHA- 133

Query: 137 EDP------KLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNLGRDGLTHNML 196
           +DP      +LEE RR  RE + GEPLT AER  LV KCQK++TKKQ+NLGRDGLTHNML
Sbjct: 134 DDPAPAAERELEEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNML 193

Query: 197 NDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVLYRGRYYNPKK 256
           NDI+N+WK+ EAVR+KCLGVPTVDM+NVC QLEDKT G IIHRHGG L+LYRGR+YNPKK
Sbjct: 194 NDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYNPKK 253

Query: 257 RPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAKNGYYGSLVPM 316
           RP IPLMLW+P EP+YPRLIKTTI+GL++EETKEMRKKGL VP LT+LAKNGYY SLVPM
Sbjct: 254 RPVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPM 313

Query: 317 VRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWRGKDYKPLVSE 376
           VRDAFL+ ELVRID KGL +SDY+KIG KLRDLVPCI+V+F+KEQI++WRGKDY   + +
Sbjct: 314 VRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDYNGTIQD 373

Query: 377 GFLTVRESF---DDAGDNTNHVDDDDDNFD 398
                  S    + AG  + + D +  + D
Sbjct: 374 NTQKTSVSVLEEESAGAESENGDQEQASSD 400

[Close]

BLAST of Sed0010108 vs. ExPASy Swiss-Prot
Match: Q9FFU1 (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.3e-86
Identity = 174/346 (50.29%), Postives = 227/346 (65.61%), Query Frame = 0


Query: 20  PSNRFLFYSKLRDHYAF--ESPPPLPPKPPSPEPKPHPNKPPKPRYKPPSSLDLDDKKPR 79
           P + FLF   LR       +  PP  P     +P     K    +    S L  D K P 
Sbjct: 14  PKDLFLFLCNLRARCVSTDDYDPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPV 73

Query: 80  HSAMPFDFQYSYTETSPLARPIGLREPK-FSPFGPGRLDRVWTGVCAPAVDPKASSVEGR 139
            S +PFDF+YSY+ET+P   PIG REPK FSPFGPGRLDR WTG  A A      S E  
Sbjct: 74  ISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALA------SPEID 133

Query: 140 EDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNLGRDGLTHNMLNDIYNN 199
           +   +EE+ RV+     GE LT  E   L+E+ + +   +Q+NLG+ G+THNM++DI+N+
Sbjct: 134 QSQWVEERARVL-----GETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNH 193

Query: 200 WKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVLYRGRYYNPKKRPFIPL 259
           WK AEAVRIKCLGVPT+DM N+C  LE+K+ GKI++R+   LVLYRGR Y+PK RP IPL
Sbjct: 194 WKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPL 253

Query: 260 MLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFL 319
           MLW+PH PIYPRL+K   DGL  EETKEMR +GL  PAL +L +NG Y ++V  VR+ F 
Sbjct: 254 MLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFE 313

Query: 320 SCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWRGK 363
           + E+VR+DC  +  SD K+IG KL+++VPC+ + F+ EQI++WRGK
Sbjct: 314 TEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]

BLAST of Sed0010108 vs. ExPASy Swiss-Prot
Match: Q0J7J7 (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 313.5 bits (802), Expect = 3.4e-84
Identity = 166/337 (49.26%), Postives = 217/337 (64.39%), Query Frame = 0


Query: 29  KLRDHYA--FESPPPLPPKPPSPEPKPHPNKPPKPRYKPPSSLDLDDKKPRHSAMPFDFQ 88
           +L  H A  F  P   PP     E  P      K + +      +   +P  S +PFDF+
Sbjct: 25  RLNHHRAPPFSDPDDDPPFTRLAERPPRAPSKKKKKEEEDQGGRIRPPEPASSDLPFDFR 84

Query: 89  YSYTETSPLARPIGLREP-KFSPFGPGRLDRVWTGVCAPAVDPKASSVEGREDPKLEEKR 148
           YSY+ET P  RPIG REP +FSPFGPGRLDR W GV A A   + +              
Sbjct: 85  YSYSETDPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAAARGEGAGAAATS-------- 144

Query: 149 RVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNLGRDGLTHNMLNDIYNNWKHAEAVRI 208
              RE + GEPL   E   LVE+ + +   +Q+NLG+ G+THNM++DI+N+WK AEAVRI
Sbjct: 145 ---REEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRI 204

Query: 209 KCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVLYRGRYYNPKKRPFIPLMLWRPHEPI 268
           KCLGVPT+DM N+C  LEDKT GK+I+R+   L+LYRGR Y+PK+RP IPLMLW+P  PI
Sbjct: 205 KCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAPI 264

Query: 269 YPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLSCELVRIDC 328
           YPRL++   DGL+ E+TKE+R  GL    L +L +NG Y ++V  VR+AF + E+VR+DC
Sbjct: 265 YPRLVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLDC 324

Query: 329 KGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWRGK 363
             +  SD KKIG KLRDLVPC+ + F+ EQI++WRGK
Sbjct: 325 SHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350

[Close]

BLAST of Sed0010108 vs. ExPASy Swiss-Prot
Match: Q84N48 (CRS2-associated factor 2, chloroplastic OS=Zea mays OX=4577 GN=CAF2 PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 5.3e-77
Identity = 152/319 (47.65%), Postives = 209/319 (65.52%), Query Frame = 0


Query: 82  PFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTGVCAPAVDPKASSVE------- 141
           PFDFQ+SY+E +P A P+ +REP F PF P  + R WTG  AP +  +  +         
Sbjct: 131 PFDFQFSYSE-APRAPPLAIREPAFLPFAPPTMPRPWTGK-APLLTKEEKARRRGVRLHT 190

Query: 142 --GREDP----------KLEEKRRV-----------IRENIQGEPLTGAERKALVEKCQK 201
             G+E P          ++ E+R++            RE + GEPLT +E +ALV+    
Sbjct: 191 PLGQETPQTVSAHGIMMEVRERRKMDLARVSPGDGRSREEVLGEPLTPSEVRALVKPHIS 250

Query: 202 NKTKKQVNLGRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKII 261
           +   +Q+N+GRDGLTHNML  I+ +W+  E  +++C GVPTVDMKN+C  LE+K+ GK+I
Sbjct: 251 H--NRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVI 310

Query: 262 HRHGGFLVLYRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLA 321
           HR GG + LYRGR+Y+PK RP  PLMLW+P  P+YP+LIK   DG + EE  EMR+KG  
Sbjct: 311 HRVGGVVFLYRGRHYDPKTRPRYPLMLWKPATPVYPKLIKEAPDGFTKEEADEMRRKGRD 370

Query: 322 VPALTRLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTF 371
           +  + +LAKNG Y +LV  VRDAF   +LV+IDC+GL  SDYKKIG KLRDLVPC+L++F
Sbjct: 371 LLPICKLAKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSF 430

[Close]

BLAST of Sed0010108 vs. ExPASy TrEMBL
Match: A0A6J1E8W9 (CRS2-associated factor 1, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431873 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 4.8e-198
Identity = 349/413 (84.50%), Postives = 367/413 (88.86%), Query Frame = 0


Query: 1   MFAIRLFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPK 60
           MF IRLFR+NPIPF HP +PSNR   YSKLRDHYAFESPP L PKPP PE KP  NKP K
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTG 120
           PRYKPPSSLDL DKKP+HS +PFDFQYSYTETS   RPIGLREPKFSPFGPGRLDR WTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNL 180
           VCAPAVDPK SS+E  EDPKLEEKRRV+ ENIQGEPLTGAERK LVE CQK KTK+Q+NL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYN+WKHAEAVRIKCLGVPTVDMKNVCTQLE+KT GKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI ETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWR 360
           NGYYGSLVPMVRDAFLSCELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTFEKEQIV+WR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYKPLVSEGFLTVRESFDDAGDNTNHVDDDDDN-------FDGGFYSGDSE 407
           GKDY+P  SE FLTVRESFDD   NTN VD+DDDN        D GF SG++E
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNQNFDDECSDSGFQSGNNE 413

[Close]

BLAST of Sed0010108 vs. ExPASy TrEMBL
Match: A0A6J1IVX0 (CRS2-associated factor 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479719 PE=4 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 1.2e-196
Identity = 344/400 (86.00%), Postives = 362/400 (90.50%), Query Frame = 0


Query: 1   MFAIRLFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPK 60
           MF IRLFR++PIPF HP +PSNR   YSKLRDHYAFESPP L PKPP PE KP  NKP K
Sbjct: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTG 120
           PRYKPPSSLDL DKKP+HS +PFDFQYSYTETS L RPIGLREPKFSPFGPGRLDR WTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNL 180
           VCAPAVDPKASS+E  EDPKLEEKRRV+ ENIQGEPLTGAERKALVE CQK KTK+Q+NL
Sbjct: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYN+WKHAEAVRIKCLGVPTVDMKNVCTQLE+KT GKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWR 360
           NGYYGSLVPMVRDAFLSCELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTFEKEQIV+WR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYKPLVSEGFLTVRESFDDAGDNTNHVDDDDDNFDGGF 401
           GKDY+P  SE FL+VRESFDD   NT  VD DDD  D  F
Sbjct: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENF 400

[Close]

BLAST of Sed0010108 vs. ExPASy TrEMBL
Match: A0A6J1D1H4 (CRS2-associated factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111016410 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 7.6e-196
Identity = 348/410 (84.88%), Postives = 366/410 (89.27%), Query Frame = 0


Query: 1   MFAIRLFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPK 60
           MF IRL R+ PI F  PL+  NR   YSKLRDHYAFESPP L PKPP+PEPKP PNKPPK
Sbjct: 1   MFVIRLLRQKPILFAPPLTSFNRCFCYSKLRDHYAFESPPSLSPKPPAPEPKPRPNKPPK 60

Query: 61  PRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTG 120
            RYKPPSSLDL DKKPRHS +PFDFQYSYTETSP  RPIGLREPK+SPFGPGRLDR W+G
Sbjct: 61  QRYKPPSSLDLADKKPRHSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWSG 120

Query: 121 VCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNL 180
           VCAPAVDPKASSVEG EDPKLEEKRR +RENIQGEPLTGAERKALVEKCQK KTK+Q+NL
Sbjct: 121 VCAPAVDPKASSVEGMEDPKLEEKRRFMRENIQGEPLTGAERKALVEKCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYN+WKHAEAVRIKCLGVPTVDMKNVCTQLEDKT GKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAK 300
           YRGR Y  KKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALT+LAK
Sbjct: 241 YRGRNYITKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTKLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWR 360
           NGYYGSLVPMVRDAFLSCELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTFEKEQIV+WR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYKPLVSEGFLTVRESFDD--AGDNTNHV--DDDDDNFDGGFYSGDSE 407
           G DYKPL S  FLTVR SFDD  A  NTN V  DDDDD+FD  +  G ++
Sbjct: 361 GNDYKPLDSGCFLTVRGSFDDDEANGNTNRVGEDDDDDDFDDDYSDGAND 410

[Close]

BLAST of Sed0010108 vs. ExPASy TrEMBL
Match: A0A5D3D3D7 (CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004260 PE=4 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 2.3e-184
Identity = 328/392 (83.67%), Postives = 349/392 (89.03%), Query Frame = 0


Query: 1   MFAIR-LFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPP 60
           MF IR + RE  IP   P +  N   FYSKLR+ YAFE P  + P P  PEPKP  NKPP
Sbjct: 1   MFVIRTISREKSIP--RPHTSFNPCSFYSKLRELYAFEFPSSVSPSP--PEPKPRSNKPP 60

Query: 61  KPRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWT 120
           KPRYKPPSSLDL DKKPR S +PFDFQYSYTETSP  RPIGLREPK+SPFGPGRLDR WT
Sbjct: 61  KPRYKPPSSLDLGDKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVN 180
           GVCAPAVDPKA+SVEG EDP+LEEKRRV+REN+QGEPLTGAERKALVEKCQKNKTK+Q+N
Sbjct: 121 GVCAPAVDPKATSVEGMEDPRLEEKRRVMRENLQGEPLTGAERKALVEKCQKNKTKRQIN 180

Query: 181 LGRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLV 240
           LGRDGLTHNMLNDI+N+WKH EAVRIKCLGVPTVDMKNVCTQLEDKT GKIIHRHGG LV
Sbjct: 181 LGRDGLTHNMLNDIHNHWKHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGLLV 240

Query: 241 LYRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLA 300
           LYRGR YNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI+ETKEMRKKGLAVPALT+LA
Sbjct: 241 LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLA 300

Query: 301 KNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIW 360
           KNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTF+KEQIV+W
Sbjct: 301 KNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVW 360

Query: 361 RGKDYKPLVSEGFLTVRESFDDAGDNTNHVDD 392
           RGKDY+PL   G+LTVRE+FDD   NT  VDD
Sbjct: 361 RGKDYQPL-DIGYLTVRETFDDVDGNTGCVDD 387

[Close]

BLAST of Sed0010108 vs. ExPASy TrEMBL
Match: A0A5A7U1B5 (CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002320 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 3.0e-184
Identity = 327/392 (83.42%), Postives = 349/392 (89.03%), Query Frame = 0


Query: 1   MFAIR-LFRENPIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPP 60
           MF IR + RE  IP   P +  N   FYSKLR+ YAFE P  + P P  PEPKP  NKPP
Sbjct: 1   MFVIRTISREKSIP--RPHTSFNPCSFYSKLRELYAFEFPSSVSPSP--PEPKPRSNKPP 60

Query: 61  KPRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWT 120
           KPRYKPPSSLDL DKKPR S +PFDFQYSYTETSP  RPIGLREPK+SPFGPGRLDR WT
Sbjct: 61  KPRYKPPSSLDLGDKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVN 180
           GVCAPAVDPKA+SVEG EDP+LEEKRRV+REN+QGEPLTGAERKALVEKCQKNKTK+Q+N
Sbjct: 121 GVCAPAVDPKATSVEGMEDPRLEEKRRVMRENLQGEPLTGAERKALVEKCQKNKTKRQIN 180

Query: 181 LGRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLV 240
           LGRDGLTHNMLNDI+N+WKH EAVRIKCLGVPTVDMKNVCTQLEDKT GKIIHRHGG LV
Sbjct: 181 LGRDGLTHNMLNDIHNHWKHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGLLV 240

Query: 241 LYRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLA 300
           LYRGR YNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI+ETKEMRKKGLAVPALT+LA
Sbjct: 241 LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLA 300

Query: 301 KNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIW 360
           KNGYYGSL+PMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTF+KEQIV+W
Sbjct: 301 KNGYYGSLIPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVW 360

Query: 361 RGKDYKPLVSEGFLTVRESFDDAGDNTNHVDD 392
           RGKDY+PL   G+LTVRE+FDD   NT  VDD
Sbjct: 361 RGKDYQPL-DIGYLTVRETFDDVDGNTGCVDD 387

[Close]

BLAST of Sed0010108 vs. TAIR 10
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 520.0 bits (1338), Expect = 1.7e-147
Identity = 266/370 (71.89%), Postives = 301/370 (81.35%), Query Frame = 0


Query: 1   MFAIRLFRENPIPF-LHPLSPSNRFLFYSKLRDHYAFESPPPL---PPKPPSPEPKPHPN 60
           MF IRL R NP  F L      ++ +  S+LRD Y F+SPPPL     + P    K +  
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISSSRLRDLYNFQSPPPLSSSASENPDFNQKNNNK 60

Query: 61  KPPKPRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDR 120
           K PKP+Y+PPSS  L+  K  HS +PFDF++SYTE+    RPIGLREPK+SPFGP RLDR
Sbjct: 61  KKPKPQYRPPSS--LEGVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDR 120

Query: 121 VWTGVCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKK 180
            WTGVCAPAV+PK  SV+G EDPKLEEKRR +RE IQG  LT AERK LVE CQ+NKTK+
Sbjct: 121 EWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKR 180

Query: 181 QVNLGRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGG 240
           QVNLGRDGLTHNMLND+YN+WKHAEAVR+KCLGVPT+DMKNV   LEDKT G+++ +H G
Sbjct: 181 QVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSG 240

Query: 241 FLVLYRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALT 300
            LVLYRGR Y+PKKRP IPLMLW+PHEP+YPRLIKTTIDGLSI+ETK MRKKGLAVPALT
Sbjct: 241 TLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALT 300

Query: 301 RLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQI 360
           +LAKNGYYGSLVPMVRDAFL  ELVRIDC GLER DYKKIG KLRDLVPCILVTF+KEQ+
Sbjct: 301 KLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQV 360

Query: 361 VIWRGKDYKP 367
           VIWRGKDYKP
Sbjct: 361 VIWRGKDYKP 368

[Close]

BLAST of Sed0010108 vs. TAIR 10
Match: AT4G31010.2 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 391.0 bits (1003), Expect = 1.2e-108
Identity = 205/302 (67.88%), Postives = 238/302 (78.81%), Query Frame = 0


Query: 1   MFAIRLFRENPIPF-LHPLSPSNRFLFYSKLRDHYAFESPPPL---PPKPPSPEPKPHPN 60
           MF IRL R NP  F L      ++ +  S+LRD Y F+SPPPL     + P    K +  
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISSSRLRDLYNFQSPPPLSSSASENPDFNQKNNNK 60

Query: 61  KPPKPRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDR 120
           K PKP+Y+PPSS  L+  K  HS +PFDF++SYTE+    RPIGLREPK+SPFGP RLDR
Sbjct: 61  KKPKPQYRPPSS--LEGVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDR 120

Query: 121 VWTGVCAPAVDPKASSVEGREDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKK 180
            WTGVCAPAV+PK  SV+G EDPKLEEKRR +RE IQG  LT AERK LVE CQ+NKTK+
Sbjct: 121 EWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKR 180

Query: 181 QVNLGRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGG 240
           QVNLGRDGLTHNMLND+YN+WKHAEAVR+KCLGVPT+DMKNV   LEDKT G+++ +H G
Sbjct: 181 QVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSG 240

Query: 241 FLVLYRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALT 299
            LVLYRGR Y+PKKRP IPLMLW+PHEP+YPRLIKTTIDGLSI+ETK MRKKGLAVPALT
Sbjct: 241 TLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALT 300

[Close]

BLAST of Sed0010108 vs. TAIR 10
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 321.6 bits (823), Expect = 8.9e-88
Identity = 174/346 (50.29%), Postives = 227/346 (65.61%), Query Frame = 0


Query: 20  PSNRFLFYSKLRDHYAF--ESPPPLPPKPPSPEPKPHPNKPPKPRYKPPSSLDLDDKKPR 79
           P + FLF   LR       +  PP  P     +P     K    +    S L  D K P 
Sbjct: 14  PKDLFLFLCNLRARCVSTDDYDPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPV 73

Query: 80  HSAMPFDFQYSYTETSPLARPIGLREPK-FSPFGPGRLDRVWTGVCAPAVDPKASSVEGR 139
            S +PFDF+YSY+ET+P   PIG REPK FSPFGPGRLDR WTG  A A      S E  
Sbjct: 74  ISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALA------SPEID 133

Query: 140 EDPKLEEKRRVIRENIQGEPLTGAERKALVEKCQKNKTKKQVNLGRDGLTHNMLNDIYNN 199
           +   +EE+ RV+     GE LT  E   L+E+ + +   +Q+NLG+ G+THNM++DI+N+
Sbjct: 134 QSQWVEERARVL-----GETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNH 193

Query: 200 WKHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVLYRGRYYNPKKRPFIPL 259
           WK AEAVRIKCLGVPT+DM N+C  LE+K+ GKI++R+   LVLYRGR Y+PK RP IPL
Sbjct: 194 WKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPL 253

Query: 260 MLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFL 319
           MLW+PH PIYPRL+K   DGL  EETKEMR +GL  PAL +L +NG Y ++V  VR+ F 
Sbjct: 254 MLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFE 313

Query: 320 SCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWRGK 363
           + E+VR+DC  +  SD K+IG KL+++VPC+ + F+ EQI++WRGK
Sbjct: 314 TEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]

BLAST of Sed0010108 vs. TAIR 10
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 288.9 bits (738), Expect = 6.4e-78
Identity = 164/348 (47.13%), Postives = 218/348 (62.64%), Query Frame = 0


Query: 38  SPPPLPPKPPSPEPKPHPNKPPKPRYKPPSSLDLDDKKPRHSAMPFDFQYSYTETSPLAR 97
           S P   P  P  +P+  P+ PP+   KP   L  D      +  PF+F+YSYTET P  +
Sbjct: 107 SKPDSGPNRPKNKPRV-PDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTET-PKVK 166

Query: 98  PIGLREPKFSPFGPGRLDRVWTGVCAPAVDPKASSVE---------GREDPKLEEKRRVI 157
           P+ LREP ++PFGP  + R WTG  AP    + +  E         G++  K  +K    
Sbjct: 167 PLKLREPAYAPFGPTTMGRPWTG-RAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPF 226

Query: 158 R-----------ENIQGEPLTGAERKALVEKCQKNKTKKQVNLGRDGLTHNMLNDIYNNW 217
           R           E I GEPLT  E + LV  C   KT +Q+N+GRDGLTHNMLN+I++ W
Sbjct: 227 RPGVGPRYVYSKEEILGEPLTKEEVRELVTSCL--KTTRQLNMGRDGLTHNMLNNIHDLW 286

Query: 218 KHAEAVRIKCLGVPTVDMKNVCTQLEDKTNGKIIHRHGGFLVLYRGRYYNPKKRPFIPLM 277
           K     +IKC GV TVDM NVC QLE+K  GK+I+R GG L L+RGR YN + RP  PLM
Sbjct: 287 KRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLM 346

Query: 278 LWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLS 337
           LW+P  P+YPRLI+   +GL+ +E   MR+KG  +  + +L KNG Y  LV  V++AF  
Sbjct: 347 LWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEV 406

Query: 338 CELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFEKEQIVIWRGKDYK 366
           CELVRIDC+G++ SD++KIG KL+DLVPC+LV+FE EQI+IWRG+++K
Sbjct: 407 CELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWK 449

[Close]

BLAST of Sed0010108 vs. TAIR 10
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 266.2 bits (679), Expect = 4.4e-71
Identity = 160/382 (41.88%), Postives = 222/382 (58.12%), Query Frame = 0


Query: 11  PIPFLHPLSPSNRFLFYSKLRDHYAFESPPPLPPKPPSPEPKPHPNKPPKPRYKPPSSLD 70
           PIP +   +PSNR       + ++  ++ P  P   P+ +   H  +  KP  +   S D
Sbjct: 35  PIP-IPKYAPSNR---NRNQKTNHQTDTNPKKPQSNPALKLPHHRTRYYKPVKEGVISSD 94

Query: 71  LD------DKKPRHS--AMPFDFQYSYTETSPLARPIGLREPKFSPFGPGRLDRVWTGVC 130
            D      D    +     PF+FQ+SY+ET P  +P+G+REP F PF P  + R WTG  
Sbjct: 95  GDRTILIGDSGVSYQLPGAPFEFQFSYSET-PKVKPVGIREPAFMPFAPPTMPRPWTGKA 154

Query: 131 --------APAVDPKASSVEGREDPKLEE-----------KRRVIRENIQGEPLTGAERK 190
                    P  D       G+   K  E           K  + RE + GEPL   E+ 
Sbjct: 155 PLKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKG 214

Query: 191 ALVEKCQKNKTKKQVNLGRDGLTHNMLNDIYNNWKHAEAVRIKCLGVPTVDMKNVCTQLE 250
            L++    +   +QVNLGRDG THNML  I+++WK     +++C GVPTVDM NVC  LE
Sbjct: 215 MLIKPHMHD--NRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLE 274

Query: 251 DKTNGKIIHRHGGFLVLYRGRYYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETK 310
           +KT G+IIHR GG + L+RGR YN + RP  PLMLW+P  P+YP+LI+   +GL+ EE  
Sbjct: 275 EKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAH 334

Query: 311 EMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDL 366
           E R KG ++  + +L+KNG Y SLV  VRDAF    LV++DC GLE SDYKKIG KL++L
Sbjct: 335 EFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKEL 394

The following BLAST results are available for this feature:

BLAST of Sed0010108 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924354.1	9.9e-198	84.50	CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_023526250.1	2.9e-197	84.50	CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
KAG7018963.1	1.1e-196	84.84	CRS2-associated factor 1, mitochondrial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022980305.1	2.4e-196	86.00	CRS2-associated factor 1, mitochondrial [Cucurbita maxima]	[more]
KAG6582581.1	3.2e-196	84.60	CRS2-associated factor 1, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of Sed0010108 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYD9	2.4e-146	71.89	CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g3...	[more]
Q6Z4U2	8.3e-131	62.82	CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9FFU1	1.3e-86	50.29	CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g5...	[more]
Q0J7J7	3.4e-84	49.26	CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q84N48	5.3e-77	47.65	CRS2-associated factor 2, chloroplastic OS=Zea mays OX=4577 GN=CAF2 PE=1 SV=1	[more]

BLAST of Sed0010108 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E8W9	4.8e-198	84.50	CRS2-associated factor 1, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1IVX0	1.2e-196	86.00	CRS2-associated factor 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479...	[more]
A0A6J1D1H4	7.6e-196	84.88	CRS2-associated factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D3D3D7	2.3e-184	83.67	CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7U1B5	3.0e-184	83.42	CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Sed0010108 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31010.1	1.7e-147	71.89	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT4G31010.2	1.2e-108	67.88	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT5G54890.1	8.9e-88	50.29	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT2G20020.1	6.4e-78	47.13	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT1G23400.1	4.4e-71	41.88	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 277..360 e-value: 1.9E-12 score: 57.3 coord: 157..242 e-value: 8.3E-22 score: 88.4
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 157..242 e-value: 1.3E-20 score: 73.3 coord: 278..360 e-value: 1.7E-9 score: 37.7
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 155..253 score: 18.915724
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 275..371 score: 17.307699
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 156..253 e-value: 3.7E-23 score: 83.4
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 277..370 e-value: 4.4E-13 score: 51.1
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 156..252
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 277..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..80
None	No IPR available	PANTHER	PTHR46247:SF2	CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL	coord: 25..389
IPR044599	CRS2-associated factor, plant	PANTHER	PTHR46247	CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC	coord: 25..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010108.1	Sed0010108.1	mRNA
Sed0010108.2	Sed0010108.2	mRNA
Sed0010108.3	Sed0010108.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003723	RNA binding