Sed0010089 (gene) Chayote v1

Overview


Name	Sed0010089
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribonuclease P protein component 3
Location	LG12: 28991843 .. 28994973 (-)
RNA-Seq Expression	Sed0010089
Synteny	Sed0010089

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACCATAGTGGTCATAAAAAATGCCGTTGAAGGTAGAGTTGCAATTTGGATAAACCCTTGCAGGTTGAACGAAATGGCTGTGTTGCAGTTGAACCACTGTATTCATCATCTTCCTCTCAGAACAATCGCCGCTCAAATTCCCCGCCGATCCAACCCCGCCTTCTTCACTCCATCTCCGGCGCCTACAGTTCCTCGCCGGAGTTTTCCTCGGATTGTGCTGAGCCAATGCGTGACCAGAGCTAGCCGCCACCAAGAATCGGAGATTCATAACATCGGCTCGAGTGAAATCGAGGTTGTGGATGATGAAGAAGGCGAAGTAAACGATGCGGATGATGGATTTTGGAGCGAAAGTGGGTTTAGGGGAAGAAATGGGGAAAAGGACTTCGATCGAGATCCTGAATTCGCTGAAATTATCGGAACTACTCTTGATGATCCCGAGAAAGCTCGTTCCAAAGTAAACATTCCTTATCTCTTTCTCGTTTGGAGCATTGCTTTCTGAACTTATGAGTGCAAATTTTATGCTTAGTGGTAGTGAATTGTTCTTTTTAGGCCATTTATTTATGTGTTTGGGTTCGTCTAGAAGTGCAAATGTGACGCATTATTAGAAGGATTTCCATTTTAGGGTTTTGGTGTTTAGCTTGAAAGATTGTCCAAATTGCAGATGGAAGAGAGGTTGAGGAAGAAAAGGAACAAGATATTGCAGCCAAAGACAGGATCAGCTGTTCCATTGAAAGTTACATTCAACAAGTATGATTCAATTCTTTGACTTGCAGTTGATGGTTGAATGCATTTGAGTATGAGGCTGTAAAATAGAGAATTCTAATGTTGGACCATCTTGACCATTCTAATTTAGTAGGTTTTTCTTATCCATAAGCTTATATAATCTGTAGTTTATCCCATTACAATACATACATATTTCGTCTCCAAGTGTGACACAATGATTGAAGACTTGGGCTTTGAAGGTCTCAGGTTCGATACTCACTTGTCACATTACTCCTTCGATGTCTCCTAGTGCCTGACCTAGGAACGGGCGTTGTTACTCTTGTTTTAAAAAAAATACAATACATAAATATTTCGTTGTTATCTTCCCATGAATGCTGCATCCGCTCTCTTTAATCTGGAGTCATATTCTATGAGGAGTTGGAGACTATAAGATTTGTAACTTTTTTTGCATTTGTATCTGATTTTTTCTTCCTATAATTTTTTTTGTATACGTGAGTGTCATTTGGTTGTCGATAAAATTGGTAGAAAATTAATCCTTTAAGTAGGTGGTCATTATAGATTGAACTCATCACTTCTTAGAAATCTAAGGTCCTCTTCGACCACTAGGCCACTATGATGGTTTGCCCTATAATTTATGAGATGGTTTGCCCTATAATTTATGAGAACTTTCTGTTAAATGCTTTTCTTGTAGCATAATTGTGCACAGTATTCTTCTCATTTTATTCCATATATATTATCTGTTTAGTTTGGAATTGACCATATGAGTTACCGATGTTTCTTCCAGATTCGATTTCTCAAACTCGTATATATGGTTTGAGTTCTACAACACTCCATTGGCAAAAGACATCACCTTAATCTGTGATGTAAGTTCTTTTTTTTTCTGTTATGTAAGTTTCTACCAAAAAAAACTTCTGTGAATTTGATTTGTTATCTTTGTTCACAGAGCATAAGGTCATGGCACATCATTGGACGTCTTGGTGGATGCAATTCCATGAATATGCAGGTAAAGTTCAATATCATTCTTCTAAAATTCAGCATTTATGTTCTTTAGCCATCCTCTGTTATAAGTTGTTAAAGAGATCATATGATTTTTAAGTCAAAAATCACATTAGTTGTAATTCCTGCAGCTTTCTCAATCTCCTATGGATAAACGACCAAGTTATGATGCTATTCAGGGAGCCAATGTTACTCCAACCACATTTTATAATATTGGGGATTTTGAGGTTCAAGACAATTTGGCTCGTATATGGTAATAGCTTTCAATCTAATATTCCCCGATGTCGATTTCCAGCTCTACTATTTTCCCCCCTTCAGACAATTTTCTTTCTTTATATTTATGGATATGATCCTGTAACTAGGAAAGAGCTGAAGATGCCAGTGTTCATATTCTTTTTCTCATTTACCTACTTAATTTTTTGCACAGGGTTGACATTGGGACCAGCGAATCTTTGCTTCTAGACATTTTGATAAATGCATTAACCCAGATAAGCTCTGAGTAAGTTTCTACTCCATTTCTTTCCCAAACTTAGTTTCCATATAAATTCTCTTGTTTTTCCTATTATCTGCTGCCGTAGTAAATGTTACGCGAGAAATCTTAATAAGATGCATGAACTACTTGTTTAGTTGCCAATTAGTTTTGAGATGAAACTTTATGTTATTTAATTTGGTATCAAAGTCCATAAAAGTTCAAATGAGTATTCAGTTCAATAAAATAAAAATTGAGATCTGATTCGAGGGTGACAATCCATCCTTAGGAGACATTAGATGAGAAATCTTACAATCAATATCTATAAAATGTATTGACAACTTTTCTTATTGATAATTAATTTTGAGATGAAACCTTATGCTATCTACTAATAGAATCACGTTGTGACGGGCTTAGATTTTCGCCCTCTTCCACAAACCAGCTCTTTTTGGGGTTTGTTCTTGCATTTTTTCCAACCCTTATGCACTCTCTCTTGTACGCCGAGTCCGCGCTCTTTGCAGTTATTGGCTCATCATGTTCTTTTCTAATGCTTATGTTACTAATACTTTTATGTACCTCTAAAATGTTCACAAATCACAGCTATGTTGGAATCAAGCAATTGGTATTTGGTGGATCTGAATTTGAGAATTGGAAAGAGGATTTGACATCAGAAGATGCAGGTTACAGCACACACAAAATTTAGTCCAACTGGATTACAATCTCAAGAATTAGCAATGTGTAACTATGTGATGAATAGGCTGAGATATCATATGGGAATGTTGTTCCTCCATTTTTGAAGTATGGGAATGGTTCACCTCACTGTCAGCCATAGTCTCTAGGAGAATAGCAAGAACCAAGAAGCTTTTAGCAACTTTGTAGCAATGAATGAGAAAATTTTACCAAAATTTTGGCTATTAAATATTTTTAGTAAGGTTAATATTA

mRNA sequence

CGACCATAGTGGTCATAAAAAATGCCGTTGAAGGTAGAGTTGCAATTTGGATAAACCCTTGCAGGTTGAACGAAATGGCTGTGTTGCAGTTGAACCACTGTATTCATCATCTTCCTCTCAGAACAATCGCCGCTCAAATTCCCCGCCGATCCAACCCCGCCTTCTTCACTCCATCTCCGGCGCCTACAGTTCCTCGCCGGAGTTTTCCTCGGATTGTGCTGAGCCAATGCGTGACCAGAGCTAGCCGCCACCAAGAATCGGAGATTCATAACATCGGCTCGAGTGAAATCGAGGTTGTGGATGATGAAGAAGGCGAAGTAAACGATGCGGATGATGGATTTTGGAGCGAAAGTGGGTTTAGGGGAAGAAATGGGGAAAAGGACTTCGATCGAGATCCTGAATTCGCTGAAATTATCGGAACTACTCTTGATGATCCCGAGAAAGCTCGTTCCAAAATGGAAGAGAGGTTGAGGAAGAAAAGGAACAAGATATTGCAGCCAAAGACAGGATCAGCTGTTCCATTGAAAGTTACATTCAACAAATTCGATTTCTCAAACTCGTATATATGGTTTGAGTTCTACAACACTCCATTGGCAAAAGACATCACCTTAATCTGTGATAGCATAAGGTCATGGCACATCATTGGACGTCTTGGTGGATGCAATTCCATGAATATGCAGCTTTCTCAATCTCCTATGGATAAACGACCAAGTTATGATGCTATTCAGGGAGCCAATGTTACTCCAACCACATTTTATAATATTGGGGATTTTGAGGTTCAAGACAATTTGGCTCGTATATGGGTTGACATTGGGACCAGCGAATCTTTGCTTCTAGACATTTTGATAAATGCATTAACCCAGATAAGCTCTGACTATGTTGGAATCAAGCAATTGGTATTTGGTGGATCTGAATTTGAGAATTGGAAAGAGGATTTGACATCAGAAGATGCAGGTTACAGCACACACAAAATTTAGTCCAACTGGATTACAATCTCAAGAATTAGCAATGTGTAACTATGTGATGAATAGGCTGAGATATCATATGGGAATGTTGTTCCTCCATTTTTGAAGTATGGGAATGGTTCACCTCACTGTCAGCCATAGTCTCTAGGAGAATAGCAAGAACCAAGAAGCTTTTAGCAACTTTGTAGCAATGAATGAGAAAATTTTACCAAAATTTTGGCTATTAAATATTTTTAGTAAGGTTAATATTA

Coding sequence (CDS)

ATGGCTGTGTTGCAGTTGAACCACTGTATTCATCATCTTCCTCTCAGAACAATCGCCGCTCAAATTCCCCGCCGATCCAACCCCGCCTTCTTCACTCCATCTCCGGCGCCTACAGTTCCTCGCCGGAGTTTTCCTCGGATTGTGCTGAGCCAATGCGTGACCAGAGCTAGCCGCCACCAAGAATCGGAGATTCATAACATCGGCTCGAGTGAAATCGAGGTTGTGGATGATGAAGAAGGCGAAGTAAACGATGCGGATGATGGATTTTGGAGCGAAAGTGGGTTTAGGGGAAGAAATGGGGAAAAGGACTTCGATCGAGATCCTGAATTCGCTGAAATTATCGGAACTACTCTTGATGATCCCGAGAAAGCTCGTTCCAAAATGGAAGAGAGGTTGAGGAAGAAAAGGAACAAGATATTGCAGCCAAAGACAGGATCAGCTGTTCCATTGAAAGTTACATTCAACAAATTCGATTTCTCAAACTCGTATATATGGTTTGAGTTCTACAACACTCCATTGGCAAAAGACATCACCTTAATCTGTGATAGCATAAGGTCATGGCACATCATTGGACGTCTTGGTGGATGCAATTCCATGAATATGCAGCTTTCTCAATCTCCTATGGATAAACGACCAAGTTATGATGCTATTCAGGGAGCCAATGTTACTCCAACCACATTTTATAATATTGGGGATTTTGAGGTTCAAGACAATTTGGCTCGTATATGGGTTGACATTGGGACCAGCGAATCTTTGCTTCTAGACATTTTGATAAATGCATTAACCCAGATAAGCTCTGACTATGTTGGAATCAAGCAATTGGTATTTGGTGGATCTGAATTTGAGAATTGGAAAGAGGATTTGACATCAGAAGATGCAGGTTACAGCACACACAAAATTTAG

Protein sequence

MAVLQLNHCIHHLPLRTIAAQIPRRSNPAFFTPSPAPTVPRRSFPRIVLSQCVTRASRHQESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGTTLDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYSTHKI

Homology

[Close]

BLAST of Sed0010089 vs. NCBI nr
Match: XP_022960849.1 (uncharacterized protein LOC111461533 [Cucurbita moschata])

HSP 1 Score: 481.5 bits (1238), Expect = 5.3e-132
Identity = 251/303 (82.84%), Postives = 267/303 (88.12%), Query Frame = 0


Query: 1   MAVLQLNHCI---HHLPLRTIAAQIPRRSNPAFFTPSPAPTVPRRSFPRIVLSQCVTRAS 60
           M VLQL+  I    HLP+RTI A+I RR+N      S      R SFPR+ L Q VTR+S
Sbjct: 1   MIVLQLSDGILTPPHLPIRTIDAKISRRANHVLHPSSVCKVHHRNSFPRLELRQYVTRSS 60

Query: 61  RHQESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGTT 120
           R Q+SE  NI SSEIEVV DEEGE  DADDGF+S SGFRGR GEKD+DRDPEFAEIIGT+
Sbjct: 61  RDQKSETQNIPSSEIEVV-DEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTS 120

Query: 121 LDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKDI 180
           +DDPEK RSKMEERLRKKRNKILQPKTGSAVP+KVTFNKFDFSNSYIWFEFYNTPLAKDI
Sbjct: 121 VDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180

Query: 181 TLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240
           TLICD+IRSWHIIGRLGGCNSMNMQLSQSP+DKRPSYDAIQGANVTPTTFYNIGDFEVQD
Sbjct: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240

Query: 241 NLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYST 300
           NLARIWVDIGTSE L+LDILINALTQISSDYVGIKQLVFGGSEFENWKE+LTSEDAGYST
Sbjct: 241 NLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYST 300

[Close]

BLAST of Sed0010089 vs. NCBI nr
Match: XP_023516267.1 (uncharacterized protein LOC111780172 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.6 bits (1233), Expect = 2.0e-131
Identity = 252/304 (82.89%), Postives = 270/304 (88.82%), Query Frame = 0


Query: 1   MAVLQLNHCI---HHLPLRTIAAQIPRRSNPAFFTPSPAPTV-PRRSFPRIVLSQCVTRA 60
           M VLQL+  I    HLP+RT+ A+I RR+N  F TPS    V P    PR+ L QCVTR+
Sbjct: 1   MIVLQLSDGILTPPHLPIRTVDAKISRRAN-HFLTPSSVCKVRPWNFSPRLELRQCVTRS 60

Query: 61  SRHQESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGT 120
           SR Q+SE  NI SSEIEVV +EEGE  DADDGF+S SGFRGR GEKD+DRDPEFAEIIGT
Sbjct: 61  SRDQKSETQNIPSSEIEVV-NEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGT 120

Query: 121 TLDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKD 180
           ++DDPEK RSKMEERLRKKRNKILQPKTGSAVP+KVTFNKFDFSNSYIWFEFYNTPLAKD
Sbjct: 121 SVDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKD 180

Query: 181 ITLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQ 240
           ITLICD+IRSWHIIGRLGGCNSMNMQLSQSP+DKRPSYDAIQGANVTPTTFYNIGDFEVQ
Sbjct: 181 ITLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQ 240

Query: 241 DNLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYS 300
           DNLARIWVDIGTSE L+LDILINALTQISSDYVGIKQLVFGGSEFENWKE+LTSEDAGYS
Sbjct: 241 DNLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYS 300

[Close]

BLAST of Sed0010089 vs. NCBI nr
Match: KAG6589976.1 (hypothetical protein SDJN03_15399, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023640.1 hypothetical protein SDJN02_14666 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 476.9 bits (1226), Expect = 1.3e-130
Identity = 248/300 (82.67%), Postives = 263/300 (87.67%), Query Frame = 0


Query: 1   MAVLQLNHCIHHLPLRTIAAQIPRRSNPAFFTPSPAPTVPRRSFPRIVLSQCVTRASRHQ 60
           M VLQL+  I   P   I A+I RR+N      S      R SFPR+ L QCVTR+SR Q
Sbjct: 1   MIVLQLSDGILTPPHLPIDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSSRDQ 60

Query: 61  ESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGTTLDD 120
           +SE  NI SSEIEVV DEEGE  DADDGF+S SGFRGR GEKD+DRDPEFAEIIGT++DD
Sbjct: 61  KSETQNIPSSEIEVV-DEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDD 120

Query: 121 PEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKDITLI 180
           PEK RSKMEERLRKKRNKILQPKTGSAVP+KVTFNKFDFSNSYIWFEFYNTPLAKDITLI
Sbjct: 121 PEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLI 180

Query: 181 CDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLA 240
           CD+IRSWHIIGRLGGCNSMNMQLSQSP+DKRPSYDAIQGANVTPTTFYNIGDFEVQDNLA
Sbjct: 181 CDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLA 240

Query: 241 RIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYSTHKI 300
           RIWVDIGTSE L+LDILINALTQISSDYVGIKQLVFGGSEFENWKE+LTSEDAGYSTHKI
Sbjct: 241 RIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI 299

[Close]

BLAST of Sed0010089 vs. NCBI nr
Match: XP_022987807.1 (uncharacterized protein LOC111485243 [Cucurbita maxima])

HSP 1 Score: 473.0 bits (1216), Expect = 1.9e-129
Identity = 245/303 (80.86%), Postives = 265/303 (87.46%), Query Frame = 0


Query: 1   MAVLQLNHCI---HHLPLRTIAAQIPRRSNPAFFTPSPAPTVPRRSFPRIVLSQCVTRAS 60
           M VLQL+  I    HLP   I A+I RR+N      S     PR  FPR+   QCVT++S
Sbjct: 1   MIVLQLSDGILTPRHLP---IDAKISRRANHVLTPSSVCKVRPRNHFPRLEQRQCVTKSS 60

Query: 61  RHQESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGTT 120
           R Q+SE  NI SSEIEVVD+E+G+  DADDGF+S SGFRGR GEKD+DRDPEFAEIIGT+
Sbjct: 61  RDQKSETQNIPSSEIEVVDEEDGDY-DADDGFFSASGFRGREGEKDYDRDPEFAEIIGTS 120

Query: 121 LDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKDI 180
           +DDPEK RSKMEERLRKKRNKILQPKTGSAVP+KVTFNKFDFSNSYIWFEFYNTPLAKDI
Sbjct: 121 VDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180

Query: 181 TLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240
           TLICD+IRSWHIIGRLGGCNSMNMQLSQSP+DKRPSYD+IQGANVTPTTFYNIGDFEVQD
Sbjct: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDSIQGANVTPTTFYNIGDFEVQD 240

Query: 241 NLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYST 300
           NLARIWVDIGTSE L+LDILINALTQISSDYVGIKQLVFGGSEFENWKE+LTSEDAGYST
Sbjct: 241 NLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYST 299

[Close]

BLAST of Sed0010089 vs. NCBI nr
Match: XP_022159241.1 (uncharacterized protein LOC111025658 [Momordica charantia])

HSP 1 Score: 462.2 bits (1188), Expect = 3.4e-126
Identity = 243/300 (81.00%), Postives = 259/300 (86.33%), Query Frame = 0


Query: 1   MAVLQLNHCIHHLPLRTIAAQIPRRSNPAFFTPSPAPTVPRRSFPRIVLSQCVTRASRHQ 60
           M VLQL      L LR I A+I R  +P   TPS A  V   +F R+ +SQCVTRASR +
Sbjct: 1   MVVLQLQLQDCALTLRPIDAKISR--HPIRSTPSSAGRVAFPNFYRLEVSQCVTRASRDR 60

Query: 61  ESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGTTLDD 120
            SE+ NI SS IEVV D+EGE  D  DG  SESGFRGR GEKD+DRDPEFAEIIGT+LDD
Sbjct: 61  NSEVQNIHSSAIEVVVDDEGEDYDGVDGVLSESGFRGREGEKDYDRDPEFAEIIGTSLDD 120

Query: 121 PEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKDITLI 180
           P+KAR KMEERLRKKRNKILQPKTGSAVPLK+TFNKFDFSNSYIWFEFYNTPLAKDITLI
Sbjct: 121 PDKARFKMEERLRKKRNKILQPKTGSAVPLKITFNKFDFSNSYIWFEFYNTPLAKDITLI 180

Query: 181 CDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLA 240
           CD+IRSWHIIGRLGGCNSMNMQLSQSP+D RPSYDAI+GANVTPTTFYNIGDFEVQDNLA
Sbjct: 181 CDTIRSWHIIGRLGGCNSMNMQLSQSPLDNRPSYDAIEGANVTPTTFYNIGDFEVQDNLA 240

Query: 241 RIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYSTHKI 300
           RIWVDIGTSE LLLDILINALTQISSDYVG+KQLVFGGSEFENWKEDLTSEDAG STHKI
Sbjct: 241 RIWVDIGTSEPLLLDILINALTQISSDYVGMKQLVFGGSEFENWKEDLTSEDAGCSTHKI 298

[Close]

BLAST of Sed0010089 vs. ExPASy TrEMBL
Match: A0A6J1HCA8 (uncharacterized protein LOC111461533 OS=Cucurbita moschata OX=3662 GN=LOC111461533 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.6e-132
Identity = 251/303 (82.84%), Postives = 267/303 (88.12%), Query Frame = 0


Query: 1   MAVLQLNHCI---HHLPLRTIAAQIPRRSNPAFFTPSPAPTVPRRSFPRIVLSQCVTRAS 60
           M VLQL+  I    HLP+RTI A+I RR+N      S      R SFPR+ L Q VTR+S
Sbjct: 1   MIVLQLSDGILTPPHLPIRTIDAKISRRANHVLHPSSVCKVHHRNSFPRLELRQYVTRSS 60

Query: 61  RHQESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGTT 120
           R Q+SE  NI SSEIEVV DEEGE  DADDGF+S SGFRGR GEKD+DRDPEFAEIIGT+
Sbjct: 61  RDQKSETQNIPSSEIEVV-DEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTS 120

Query: 121 LDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKDI 180
           +DDPEK RSKMEERLRKKRNKILQPKTGSAVP+KVTFNKFDFSNSYIWFEFYNTPLAKDI
Sbjct: 121 VDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180

Query: 181 TLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240
           TLICD+IRSWHIIGRLGGCNSMNMQLSQSP+DKRPSYDAIQGANVTPTTFYNIGDFEVQD
Sbjct: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240

Query: 241 NLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYST 300
           NLARIWVDIGTSE L+LDILINALTQISSDYVGIKQLVFGGSEFENWKE+LTSEDAGYST
Sbjct: 241 NLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYST 300

[Close]

BLAST of Sed0010089 vs. ExPASy TrEMBL
Match: A0A6J1JBD6 (uncharacterized protein LOC111485243 OS=Cucurbita maxima OX=3661 GN=LOC111485243 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 9.2e-130
Identity = 245/303 (80.86%), Postives = 265/303 (87.46%), Query Frame = 0


Query: 1   MAVLQLNHCI---HHLPLRTIAAQIPRRSNPAFFTPSPAPTVPRRSFPRIVLSQCVTRAS 60
           M VLQL+  I    HLP   I A+I RR+N      S     PR  FPR+   QCVT++S
Sbjct: 1   MIVLQLSDGILTPRHLP---IDAKISRRANHVLTPSSVCKVRPRNHFPRLEQRQCVTKSS 60

Query: 61  RHQESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGTT 120
           R Q+SE  NI SSEIEVVD+E+G+  DADDGF+S SGFRGR GEKD+DRDPEFAEIIGT+
Sbjct: 61  RDQKSETQNIPSSEIEVVDEEDGDY-DADDGFFSASGFRGREGEKDYDRDPEFAEIIGTS 120

Query: 121 LDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKDI 180
           +DDPEK RSKMEERLRKKRNKILQPKTGSAVP+KVTFNKFDFSNSYIWFEFYNTPLAKDI
Sbjct: 121 VDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180

Query: 181 TLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240
           TLICD+IRSWHIIGRLGGCNSMNMQLSQSP+DKRPSYD+IQGANVTPTTFYNIGDFEVQD
Sbjct: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDSIQGANVTPTTFYNIGDFEVQD 240

Query: 241 NLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYST 300
           NLARIWVDIGTSE L+LDILINALTQISSDYVGIKQLVFGGSEFENWKE+LTSEDAGYST
Sbjct: 241 NLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYST 299

[Close]

BLAST of Sed0010089 vs. ExPASy TrEMBL
Match: A0A6J1E3B4 (uncharacterized protein LOC111025658 OS=Momordica charantia OX=3673 GN=LOC111025658 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.6e-126
Identity = 243/300 (81.00%), Postives = 259/300 (86.33%), Query Frame = 0


Query: 1   MAVLQLNHCIHHLPLRTIAAQIPRRSNPAFFTPSPAPTVPRRSFPRIVLSQCVTRASRHQ 60
           M VLQL      L LR I A+I R  +P   TPS A  V   +F R+ +SQCVTRASR +
Sbjct: 1   MVVLQLQLQDCALTLRPIDAKISR--HPIRSTPSSAGRVAFPNFYRLEVSQCVTRASRDR 60

Query: 61  ESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGTTLDD 120
            SE+ NI SS IEVV D+EGE  D  DG  SESGFRGR GEKD+DRDPEFAEIIGT+LDD
Sbjct: 61  NSEVQNIHSSAIEVVVDDEGEDYDGVDGVLSESGFRGREGEKDYDRDPEFAEIIGTSLDD 120

Query: 121 PEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKDITLI 180
           P+KAR KMEERLRKKRNKILQPKTGSAVPLK+TFNKFDFSNSYIWFEFYNTPLAKDITLI
Sbjct: 121 PDKARFKMEERLRKKRNKILQPKTGSAVPLKITFNKFDFSNSYIWFEFYNTPLAKDITLI 180

Query: 181 CDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLA 240
           CD+IRSWHIIGRLGGCNSMNMQLSQSP+D RPSYDAI+GANVTPTTFYNIGDFEVQDNLA
Sbjct: 181 CDTIRSWHIIGRLGGCNSMNMQLSQSPLDNRPSYDAIEGANVTPTTFYNIGDFEVQDNLA 240

Query: 241 RIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYSTHKI 300
           RIWVDIGTSE LLLDILINALTQISSDYVG+KQLVFGGSEFENWKEDLTSEDAG STHKI
Sbjct: 241 RIWVDIGTSEPLLLDILINALTQISSDYVGMKQLVFGGSEFENWKEDLTSEDAGCSTHKI 298

[Close]

BLAST of Sed0010089 vs. ExPASy TrEMBL
Match: A0A1S3BQT1 (uncharacterized protein LOC103492292 OS=Cucumis melo OX=3656 GN=LOC103492292 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 6.8e-125
Identity = 238/304 (78.29%), Postives = 262/304 (86.18%), Query Frame = 0


Query: 1   MAVLQLNHCI---HHLPLRTIAAQIPRRSNPAFFTPSPAPTVP-RRSFPRIVLSQCVTRA 60
           M VLQ +H I     LP+ TI A+I   +N  +F P    + P  R+F        ++ A
Sbjct: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTN--YFLPPYTLSKPLHRNF--------LSSA 60

Query: 61  SRHQESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGT 120
           +R ++SEI+NI S+EIEVVD+E  + +D DD FWSESGFRGR  EKD+DRDPEFAEIIGT
Sbjct: 61  ARDKKSEIYNIPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGT 120

Query: 121 TLDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKD 180
           +LDDPEKARSKMEERLRKKRNKILQPKTGSAVP+KVTFNKFDFSNSYIWFEFYNTPLAKD
Sbjct: 121 SLDDPEKARSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKD 180

Query: 181 ITLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQ 240
           ITLICD+IRSWHIIGRLGGCNSMNMQLSQSP+DKRPSYDAIQGANVTPTTFYNIGDFEVQ
Sbjct: 181 ITLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQ 240

Query: 241 DNLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYS 300
           DNLARIWVDIGTSE LLLD+LINALTQISSDYVGIKQLVFGGSEFENWKEDLT+EDAGYS
Sbjct: 241 DNLARIWVDIGTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYS 294

[Close]

BLAST of Sed0010089 vs. ExPASy TrEMBL
Match: A0A5D3CFI6 (Ribonuclease P protein component 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002630 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 6.8e-125
Identity = 238/304 (78.29%), Postives = 262/304 (86.18%), Query Frame = 0


Query: 1   MAVLQLNHCI---HHLPLRTIAAQIPRRSNPAFFTPSPAPTVP-RRSFPRIVLSQCVTRA 60
           M VLQ +H I     LP+ TI A+I   +N  +F P    + P  R+F        ++ A
Sbjct: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTN--YFLPPYTLSKPLHRNF--------LSSA 60

Query: 61  SRHQESEIHNIGSSEIEVVDDEEGEVNDADDGFWSESGFRGRNGEKDFDRDPEFAEIIGT 120
           +R ++SEI+NI S+EIEVVD+E  + +D DD FWSESGFRGR  EKD+DRDPEFAEIIGT
Sbjct: 61  ARDKKSEIYNIPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGT 120

Query: 121 TLDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKD 180
           +LDDPEKARSKMEERLRKKRNKILQPKTGSAVP+KVTFNKFDFSNSYIWFEFYNTPLAKD
Sbjct: 121 SLDDPEKARSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKD 180

Query: 181 ITLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQ 240
           ITLICD+IRSWHIIGRLGGCNSMNMQLSQSP+DKRPSYDAIQGANVTPTTFYNIGDFEVQ
Sbjct: 181 ITLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQ 240

Query: 241 DNLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYS 300
           DNLARIWVDIGTSE LLLD+LINALTQISSDYVGIKQLVFGGSEFENWKEDLT+EDAGYS
Sbjct: 241 DNLARIWVDIGTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYS 294

[Close]

BLAST of Sed0010089 vs. TAIR 10
Match: AT4G29400.1 (Protein of unknown function (DUF3531) )

HSP 1 Score: 328.2 bits (840), Expect = 7.0e-90
Identity = 173/304 (56.91%), Postives = 224/304 (73.68%), Query Frame = 0


Query: 9   CIHHLPLRTIAAQIPRRSNPAFFTPSP---APTVPRRSFPRIVLSQCVTRASRHQES--- 68
           C  HL   ++A      SN      +P     T+P +    +       RA+R +ES   
Sbjct: 6   CFLHLLQPSMAKNNSNHSNICLHNLAPFRVTDTIPVQKIQEL-------RANRSRESGKL 65

Query: 69  EIHNIGSSEIEVVDD----EEGEVNDADDGFWSESG--FRGRNGEKDFDRDPEFAEIIGT 128
            ++ IG    E V++    ++G+ ++ +D F ++    +R +  + D+D+DPEFA+I+G 
Sbjct: 66  RVNGIGREMEEGVEEFEEVDDGDDDEVEDEFSAKKRGVYRAKKEKIDYDKDPEFADILGD 125

Query: 129 TLDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWFEFYNTPLAKD 188
            LD+P+KA+ KMEERLRKKRNKIL  KTGSA  + VTFNKF++SNSY+W EFYNTPL KD
Sbjct: 126 CLDNPDKAQKKMEERLRKKRNKILHTKTGSATSMPVTFNKFEYSNSYMWLEFYNTPLDKD 185

Query: 189 ITLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTTFYNIGDFEVQ 248
           I LI D+IRSWHI+GRLGG NSMNMQLSQ+P+DKRP+YDAI GANV PTTFYNIGD EVQ
Sbjct: 186 IALISDTIRSWHILGRLGGYNSMNMQLSQAPLDKRPNYDAILGANVEPTTFYNIGDLEVQ 245

Query: 249 DNLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYS 301
           DN+ARIW+DIGTSE L+LD+LINALTQISSDYVGIK++VFGGSEFE+WKE++TSE++G+ 
Sbjct: 246 DNVARIWLDIGTSEPLILDVLINALTQISSDYVGIKKVVFGGSEFESWKENMTSEESGFR 302

[Close]

BLAST of Sed0010089 vs. TAIR 10
Match: AT5G08400.1 (Protein of unknown function (DUF3531) )

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48
Identity = 87/194 (44.85%), Postives = 131/194 (67.53%), Query Frame = 0


Query: 107 DPEFAEIIGTTLDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWF 166
           D E   ++G ++ +PE  R K+EER+RKK     + KTGS +  KV F  F+  +S+IWF
Sbjct: 140 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWF 199

Query: 167 EFYNTPLAKDITLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTT 226
           E Y TP  +D+ LI   I++W+++GRLG  N+ N+QL+ + ++  P YDA +G  V P++
Sbjct: 200 ELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSS 259

Query: 227 FYNIGDFEVQDNLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKE 286
           F++I D E QDN  R+WVD+GTS+   LD+L+N LT +SS+Y+GI+Q+VFGG    +W+E
Sbjct: 260 FHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRMGDWEE 319

Query: 287 DLTSEDAGYSTHKI 301
            +T+ D GY   KI
Sbjct: 320 GMTNPDFGYKYFKI 333

[Close]

BLAST of Sed0010089 vs. TAIR 10
Match: AT5G08400.2 (Protein of unknown function (DUF3531) )

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48
Identity = 87/194 (44.85%), Postives = 131/194 (67.53%), Query Frame = 0


Query: 107 DPEFAEIIGTTLDDPEKARSKMEERLRKKRNKILQPKTGSAVPLKVTFNKFDFSNSYIWF 166
           D E   ++G ++ +PE  R K+EER+RKK     + KTGS +  KV F  F+  +S+IWF
Sbjct: 107 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWF 166

Query: 167 EFYNTPLAKDITLICDSIRSWHIIGRLGGCNSMNMQLSQSPMDKRPSYDAIQGANVTPTT 226
           E Y TP  +D+ LI   I++W+++GRLG  N+ N+QL+ + ++  P YDA +G  V P++
Sbjct: 167 ELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSS 226

Query: 227 FYNIGDFEVQDNLARIWVDIGTSESLLLDILINALTQISSDYVGIKQLVFGGSEFENWKE 286
           F++I D E QDN  R+WVD+GTS+   LD+L+N LT +SS+Y+GI+Q+VFGG    +W+E
Sbjct: 227 FHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRMGDWEE 286

Query: 287 DLTSEDAGYSTHKI 301
            +T+ D GY   KI
Sbjct: 287 GMTNPDFGYKYFKI 300

The following BLAST results are available for this feature:

BLAST of Sed0010089 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960849.1	5.3e-132	82.84	uncharacterized protein LOC111461533 [Cucurbita moschata]	[more]
XP_023516267.1	2.0e-131	82.89	uncharacterized protein LOC111780172 [Cucurbita pepo subsp. pepo]	[more]
KAG6589976.1	1.3e-130	82.67	hypothetical protein SDJN03_15399, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022987807.1	1.9e-129	80.86	uncharacterized protein LOC111485243 [Cucurbita maxima]	[more]
XP_022159241.1	3.4e-126	81.00	uncharacterized protein LOC111025658 [Momordica charantia]	[more]

BLAST of Sed0010089 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0010089 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCA8	2.6e-132	82.84	uncharacterized protein LOC111461533 OS=Cucurbita moschata OX=3662 GN=LOC1114615...	[more]
A0A6J1JBD6	9.2e-130	80.86	uncharacterized protein LOC111485243 OS=Cucurbita maxima OX=3661 GN=LOC111485243...	[more]
A0A6J1E3B4	1.6e-126	81.00	uncharacterized protein LOC111025658 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A1S3BQT1	6.8e-125	78.29	uncharacterized protein LOC103492292 OS=Cucumis melo OX=3656 GN=LOC103492292 PE=...	[more]
A0A5D3CFI6	6.8e-125	78.29	Ribonuclease P protein component 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Sed0010089 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29400.1	7.0e-90	56.91	Protein of unknown function (DUF3531)	[more]
AT5G08400.1	1.8e-48	44.85	Protein of unknown function (DUF3531)	[more]
AT5G08400.2	1.8e-48	44.85	Protein of unknown function (DUF3531)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021920	Protein of unknown function DUF3531	PFAM	PF12049	DUF3531	coord: 151..290 e-value: 1.2E-52 score: 177.7
None	No IPR available	PANTHER	PTHR46737	OS02G0827600 PROTEIN	coord: 6..300
None	No IPR available	PANTHER	PTHR46737:SF3	OXIDOREDUCTASE/TRANSITION METAL ION-BINDING PROTEIN (DUF3531)	coord: 6..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010089.1	Sed0010089.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032774	RNA biosynthetic process
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity