Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTTGCTGCCTTCACACTCTTGCTCTTCCTCTTCTTCCTTCTCCACTTCCAGTTTTGATGGCAATGCCTGCAATCCCAGAGCTTCAGCTTCTCCTAGCTGCCTCTCGGGGATTCTCCGCCGAATTCTCTGCTCGGGTAGCCTCCCGACGCACCCGTCGGATCATATCACAGAAGAAACCAACTCAGTGAAGTCTGATGACAAGCTTTTACAAGTCAAGGATGTGAGTGTCCTCAATGCAACAAATGAGGCCAAGCCCAGTGCTGGAATTGTGGCAAGGCTGATGGGTTTGGATCCCATGCCCGAGATGAAGCAGAATCATAACACGATAGCAGGAAGCCAATCCTTGAACTCTGTGGAGCATTTCTTCAAACACCTTGAAGGCAGGCATAAAGGGGTCAAATCAGCAGTGTCATTTAGAGAGATACCCACCTTTATTGAGCTTCAAAATGAGAATTACTTCATACTTAGCTTTGAAGGAGAAGCCAAAAGTAAAGAATTCAAAGCAAAAGAAAGTAGAATCAAGCAAAGAAATGAAGAGAAAGTCAAATTTAAAAACAGGGGAAGCAACAAAACAGAACAGGCAGAGAAAATGAAGAGATTCAATCCAGAGGCAGCCAAAGAAATCATCGTAAAAGATTTGAAACAGAAGAAGAAACCAAGACAAGTAGAATCCGAGTCAAGCTCCAGCTCCGACGAATTAATAAGCCCAGTCTCAGTTCTCGAAAGAGATTCAACTCCATTATCAGGTTTGAATTCCTTTTTTTCAACAAACCCTAATTCAGATTCTTCAATTGGGTTTCTCAAATTCCCTTAATCACTACTTTCAGGAGACGCCTCTTCGAATCGAAGGAAATTATCACCGGATCTTGACGATGGTTTAATTATCAAGGAAGGAAAATCCACGAAGACGAAAGTAATTTACAATGGGGTTAGGCCAGAAAGATTTGAAGAAGGGATTTGTGAGATATCAGAAATGGAATTATTGAGCGAATCCAATTGGATCAAATGCAGCAAAATTAGTGAAGAACTTGACGTTGGAGGTATAATTGAAGGTTTTGATTCCTATATTCTTGATGGATTGATAGAGGAATTTGTAGAACAGATGTATGATTCGATCTTCTTCTGA
mRNA sequence
ATGAACTTGCTGCCTTCACACTCTTGCTCTTCCTCTTCTTCCTTCTCCACTTCCAGTTTTGATGGCAATGCCTGCAATCCCAGAGCTTCAGCTTCTCCTAGCTGCCTCTCGGGGATTCTCCGCCGAATTCTCTGCTCGGGTAGCCTCCCGACGCACCCGTCGGATCATATCACAGAAGAAACCAACTCAGTGAAGTCTGATGACAAGCTTTTACAAGTCAAGGATGTGAGTGTCCTCAATGCAACAAATGAGGCCAAGCCCAGTGCTGGAATTGTGGCAAGGCTGATGGGTTTGGATCCCATGCCCGAGATGAAGCAGAATCATAACACGATAGCAGGAAGCCAATCCTTGAACTCTGTGGAGCATTTCTTCAAACACCTTGAAGGCAGGCATAAAGGGGTCAAATCAGCAGTGTCATTTAGAGAGATACCCACCTTTATTGAGCTTCAAAATGAGAATTACTTCATACTTAGCTTTGAAGGAGAAGCCAAAAGTAAAGAATTCAAAGCAAAAGAAAGTAGAATCAAGCAAAGAAATGAAGAGAAAGTCAAATTTAAAAACAGGGGAAGCAACAAAACAGAACAGGCAGAGAAAATGAAGAGATTCAATCCAGAGGCAGCCAAAGAAATCATCGTAAAAGATTTGAAACAGAAGAAGAAACCAAGACAAGTAGAATCCGAGTCAAGCTCCAGCTCCGACGAATTAATAAGCCCAGTCTCAGTTCTCGAAAGAGATTCAACTCCATTATCAGGAGACGCCTCTTCGAATCGAAGGAAATTATCACCGGATCTTGACGATGGTTTAATTATCAAGGAAGGAAAATCCACGAAGACGAAAGTAATTTACAATGGGGTTAGGCCAGAAAGATTTGAAGAAGGGATTTGTGAGATATCAGAAATGGAATTATTGAGCGAATCCAATTGGATCAAATGCAGCAAAATTAGTGAAGAACTTGACGTTGGAGGTATAATTGAAGGTTTTGATTCCTATATTCTTGATGGATTGATAGAGGAATTTGTAGAACAGATGTATGATTCGATCTTCTTCTGA
Coding sequence (CDS)
ATGAACTTGCTGCCTTCACACTCTTGCTCTTCCTCTTCTTCCTTCTCCACTTCCAGTTTTGATGGCAATGCCTGCAATCCCAGAGCTTCAGCTTCTCCTAGCTGCCTCTCGGGGATTCTCCGCCGAATTCTCTGCTCGGGTAGCCTCCCGACGCACCCGTCGGATCATATCACAGAAGAAACCAACTCAGTGAAGTCTGATGACAAGCTTTTACAAGTCAAGGATGTGAGTGTCCTCAATGCAACAAATGAGGCCAAGCCCAGTGCTGGAATTGTGGCAAGGCTGATGGGTTTGGATCCCATGCCCGAGATGAAGCAGAATCATAACACGATAGCAGGAAGCCAATCCTTGAACTCTGTGGAGCATTTCTTCAAACACCTTGAAGGCAGGCATAAAGGGGTCAAATCAGCAGTGTCATTTAGAGAGATACCCACCTTTATTGAGCTTCAAAATGAGAATTACTTCATACTTAGCTTTGAAGGAGAAGCCAAAAGTAAAGAATTCAAAGCAAAAGAAAGTAGAATCAAGCAAAGAAATGAAGAGAAAGTCAAATTTAAAAACAGGGGAAGCAACAAAACAGAACAGGCAGAGAAAATGAAGAGATTCAATCCAGAGGCAGCCAAAGAAATCATCGTAAAAGATTTGAAACAGAAGAAGAAACCAAGACAAGTAGAATCCGAGTCAAGCTCCAGCTCCGACGAATTAATAAGCCCAGTCTCAGTTCTCGAAAGAGATTCAACTCCATTATCAGGAGACGCCTCTTCGAATCGAAGGAAATTATCACCGGATCTTGACGATGGTTTAATTATCAAGGAAGGAAAATCCACGAAGACGAAAGTAATTTACAATGGGGTTAGGCCAGAAAGATTTGAAGAAGGGATTTGTGAGATATCAGAAATGGAATTATTGAGCGAATCCAATTGGATCAAATGCAGCAAAATTAGTGAAGAACTTGACGTTGGAGGTATAATTGAAGGTTTTGATTCCTATATTCTTGATGGATTGATAGAGGAATTTGTAGAACAGATGTATGATTCGATCTTCTTCTGA
Protein sequence
MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSVEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESRIKQRNEEKVKFKNRGSNKTEQAEKMKRFNPEAAKEIIVKDLKQKKKPRQVESESSSSSDELISPVSVLERDSTPLSGDASSNRRKLSPDLDDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNWIKCSKISEELDVGGIIEGFDSYILDGLIEEFVEQMYDSIFF
Homology
BLAST of Sed0010018 vs. NCBI nr
Match:
XP_038896059.1 (uncharacterized protein LOC120084230 [Benincasa hispida])
HSP 1 Score: 401.4 bits (1030), Expect = 8.2e-108
Identity = 246/402 (61.19%), Postives = 295/402 (73.38%), Query Frame = 0
Query: 1 MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEE 60
M LLPS SCSSSSSFSTS+FD + CNPR A+PSCLSGILRRILCSGSLPTHP+DHITEE
Sbjct: 1 MKLLPSPSCSSSSSFSTSTFDAHVCNPR--ATPSCLSGILRRILCSGSLPTHPTDHITEE 60
Query: 61 TNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSV 120
T+SVKSDDKLLQVKD++V+ +TNE KP+AGIVARLMGLD MPEMKQNHN+++ SQS+NSV
Sbjct: 61 TSSVKSDDKLLQVKDLNVIKSTNETKPTAGIVARLMGLDSMPEMKQNHNSLSRSQSMNSV 120
Query: 121 EHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIKQ 180
EHF+KHLE +H+ V+S +SFRE+PTF+EL+NE YFILSFEGE+KSKEFKAK + Q
Sbjct: 121 EHFYKHLEDKHQRVRSTLSFREVPTFLELENEEYFILSFEGESKSKEFKAKVRNSTEFNQ 180
Query: 181 RNEEKVKFKNRGSNKTEQAE----KMKRFNPEAAKEIIVKDLKQKKKPRQVES------- 240
R E++ K+KNRGSNKTEQ+ K KRF+PE +K+ + DLK+KKK R+ S
Sbjct: 181 RKEDEDKYKNRGSNKTEQSSVRKTKKKRFDPEESKQFVQIDLKEKKKSRKRFSKNKPTSR 240
Query: 241 ---------------ESSSSSDELISPVSVLE--------RDSTPLSGDASSN-----RR 300
ES SSDEL SPVSVL+ ++ LSGDA+SN RR
Sbjct: 241 ISTKDRHGRKSTRQVESDCSSDEL-SPVSVLDSNQFLRDPEEAISLSGDAASNSPINTRR 300
Query: 301 KLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNWI 349
KLS +L DD LII GK K KV+ +G++ ER+E+ IC+I+EME L ESNW
Sbjct: 301 KLSSELEIPKTPSRNDDDLIINGGKIAKKKVV-DGIQRERYEKEICKITEME-LEESNW- 360
BLAST of Sed0010018 vs. NCBI nr
Match:
KAA0031834.1 (transcriptional regulator ATRX-like protein isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 381.3 bits (978), Expect = 8.7e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0
Query: 1 MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1 MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60
Query: 61 ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
ET+SVKSDDK+L KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++ SQS+NS
Sbjct: 61 ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120
Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
VEH +K+L+ +H+ V+S SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180
Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
QRNE++ K K+RGSNKTEQ+ K K F+PE AK+ ++ DLK+KKK R+ S
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240
Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
ES SSDEL SPVSVL + +ST L+GD +SN R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPIYPR 300
Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
RKLS + DD LI+ GK KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360
BLAST of Sed0010018 vs. NCBI nr
Match:
XP_008457365.1 (PREDICTED: uncharacterized protein LOC103497072 [Cucumis melo] >TYJ97302.1 transcriptional regulator ATRX-like protein isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 381.3 bits (978), Expect = 8.7e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0
Query: 1 MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1 MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60
Query: 61 ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
ET+SVKSDDK+L KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++ SQS+NS
Sbjct: 61 ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120
Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
VEH +K+L+ +H+ V+S SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180
Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
QRNE++ K K+RGSNKTEQ+ K K F+PE AK+ ++ DLK+KKK R+ S
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240
Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
ES SSDEL SPVSVL + +ST L+GD +SN R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPINPR 300
Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
RKLS + DD LI+ GK KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360
BLAST of Sed0010018 vs. NCBI nr
Match:
XP_022150887.1 (uncharacterized protein LOC111018930 [Momordica charantia])
HSP 1 Score: 370.9 bits (951), Expect = 1.2e-98
Identity = 243/419 (58.00%), Postives = 282/419 (67.30%), Query Frame = 0
Query: 1 MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEE 60
M LLPS SCSSSSSFSTS+FD N CNPR A+PSCLSGILRRILCSGSLPTHPSD I EE
Sbjct: 1 MKLLPSPSCSSSSSFSTSTFDANVCNPR--ATPSCLSGILRRILCSGSLPTHPSDQIMEE 60
Query: 61 TNSVKSD-DKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
NSVKSD DK+LQVKDVS + ATNE KPSAGIVARLMGLDPMPEMK N N I+ SQS+NS
Sbjct: 61 ANSVKSDSDKVLQVKDVSAIKATNEGKPSAGIVARLMGLDPMPEMKLNQNLISRSQSMNS 120
Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESR----- 180
+EHF+KHLEG+H+ ++S +SFREIPTF+EL+NE+YFILSFEGE++SKEF+ KE R
Sbjct: 121 LEHFYKHLEGKHQRIRSTLSFREIPTFLELENEDYFILSFEGESRSKEFRPKERRRSERR 180
Query: 181 ---IKQRNEEKVKFKNRGSNKTEQ-----AEKMKRFNPEAAKEIIVKDLKQKKKPRQVES 240
KQR EE+ + KN GSNKTEQ +K K +PE AKE ++ DLK++KK R+ S
Sbjct: 181 SGEFKQRKEEEERCKNGGSNKTEQLSASKTKKKKTLDPEEAKEFVLIDLKEQKKSRRRVS 240
Query: 241 -------------------------------------ESSSSSDELISPVSVLE-----R 300
ES SSDE SPVSVL+ R
Sbjct: 241 NKRTSKISTKEHRHGRLRGGGSVPERVTNGRKATRRVESDCSSDE-SSPVSVLDCSQFLR 300
Query: 301 DS-TPLSGDASSN------RRKLSPDL----------DDGLIIKEGKSTKTKVIYNGVRP 346
DS P SGDA+S+ RRKLSP+L DD LII E K K K +G +
Sbjct: 301 DSGAPSSGDAASSSSPTHPRRKLSPELEISQSPSPRNDDDLIINEVKIAKAKGGGDGTQQ 360
BLAST of Sed0010018 vs. NCBI nr
Match:
XP_022997806.1 (uncharacterized protein LOC111492651 [Cucurbita maxima])
HSP 1 Score: 369.8 bits (948), Expect = 2.6e-98
Identity = 238/395 (60.25%), Postives = 279/395 (70.63%), Query Frame = 0
Query: 3 LLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEETN 62
LLPS SCSS+SSFS S+FD + CNPRA+A+PSCLSGILRRILCSGSLPTHPSD ITEETN
Sbjct: 4 LLPSPSCSSTSSFSASNFDAHVCNPRAAATPSCLSGILRRILCSGSLPTHPSDQITEETN 63
Query: 63 SVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSVEH 122
S+KS+D VK+V V+ TNEAKP+AGIVARLMGLD MP+MKQN N+IA +QS+NSVEH
Sbjct: 64 SLKSED---NVKNVGVMKDTNEAKPTAGIVARLMGLDTMPDMKQNCNSIARTQSMNSVEH 123
Query: 123 FFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESRIKQRNEEK 182
F+KHLEG+HKGV+S SFREIPTF+EL+NE+YFILSFEG++K++EFKAK R EEK
Sbjct: 124 FYKHLEGKHKGVRSTQSFREIPTFLELENEDYFILSFEGDSKNEEFKAKARR---HGEEK 183
Query: 183 VKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------------ 242
+NRGSNKTE + K K FNPE AKE ++ DLKQKKK R+ S
Sbjct: 184 C--QNRGSNKTEHSYVRKTKKKIFNPEEAKEFVLIDLKQKKKSRKRVSRNKPTSRISTKD 243
Query: 243 ----------ESSSSSDELISPVSVLE-----RDS---TPLSGDASS-----NRRKLSPD 302
ES SSDEL SPVSVL+ RDS PLSGDA+S +RRKLSP+
Sbjct: 244 RHGRRSTRKVESEQSSDEL-SPVSVLDSSEFLRDSEEAAPLSGDAASKSPVNSRRKLSPE 303
Query: 303 L---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELL-SESNWIKCSK 349
L DD LIIKEG KT+ I EE IC+I+EMEL+ S N+ K +
Sbjct: 304 LEISQRRSLDDDDLIIKEGNPAKTRAI---------EEEICKITEMELVKSIWNYRKFCE 363
BLAST of Sed0010018 vs. ExPASy TrEMBL
Match:
A0A5D3BBU9 (Transcriptional regulator ATRX-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001010 PE=4 SV=1)
HSP 1 Score: 381.3 bits (978), Expect = 4.2e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0
Query: 1 MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1 MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60
Query: 61 ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
ET+SVKSDDK+L KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++ SQS+NS
Sbjct: 61 ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120
Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
VEH +K+L+ +H+ V+S SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180
Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
QRNE++ K K+RGSNKTEQ+ K K F+PE AK+ ++ DLK+KKK R+ S
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240
Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
ES SSDEL SPVSVL + +ST L+GD +SN R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPINPR 300
Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
RKLS + DD LI+ GK KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360
BLAST of Sed0010018 vs. ExPASy TrEMBL
Match:
A0A5A7SKY9 (Transcriptional regulator ATRX-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00840 PE=4 SV=1)
HSP 1 Score: 381.3 bits (978), Expect = 4.2e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0
Query: 1 MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1 MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60
Query: 61 ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
ET+SVKSDDK+L KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++ SQS+NS
Sbjct: 61 ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120
Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
VEH +K+L+ +H+ V+S SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180
Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
QRNE++ K K+RGSNKTEQ+ K K F+PE AK+ ++ DLK+KKK R+ S
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240
Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
ES SSDEL SPVSVL + +ST L+GD +SN R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPIYPR 300
Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
RKLS + DD LI+ GK KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360
BLAST of Sed0010018 vs. ExPASy TrEMBL
Match:
A0A1S3C6M1 (uncharacterized protein LOC103497072 OS=Cucumis melo OX=3656 GN=LOC103497072 PE=4 SV=1)
HSP 1 Score: 381.3 bits (978), Expect = 4.2e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0
Query: 1 MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1 MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60
Query: 61 ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
ET+SVKSDDK+L KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++ SQS+NS
Sbjct: 61 ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120
Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
VEH +K+L+ +H+ V+S SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180
Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
QRNE++ K K+RGSNKTEQ+ K K F+PE AK+ ++ DLK+KKK R+ S
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240
Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
ES SSDEL SPVSVL + +ST L+GD +SN R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPINPR 300
Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
RKLS + DD LI+ GK KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360
BLAST of Sed0010018 vs. ExPASy TrEMBL
Match:
A0A6J1DBZ9 (uncharacterized protein LOC111018930 OS=Momordica charantia OX=3673 GN=LOC111018930 PE=4 SV=1)
HSP 1 Score: 370.9 bits (951), Expect = 5.7e-99
Identity = 243/419 (58.00%), Postives = 282/419 (67.30%), Query Frame = 0
Query: 1 MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEE 60
M LLPS SCSSSSSFSTS+FD N CNPR A+PSCLSGILRRILCSGSLPTHPSD I EE
Sbjct: 1 MKLLPSPSCSSSSSFSTSTFDANVCNPR--ATPSCLSGILRRILCSGSLPTHPSDQIMEE 60
Query: 61 TNSVKSD-DKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
NSVKSD DK+LQVKDVS + ATNE KPSAGIVARLMGLDPMPEMK N N I+ SQS+NS
Sbjct: 61 ANSVKSDSDKVLQVKDVSAIKATNEGKPSAGIVARLMGLDPMPEMKLNQNLISRSQSMNS 120
Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESR----- 180
+EHF+KHLEG+H+ ++S +SFREIPTF+EL+NE+YFILSFEGE++SKEF+ KE R
Sbjct: 121 LEHFYKHLEGKHQRIRSTLSFREIPTFLELENEDYFILSFEGESRSKEFRPKERRRSERR 180
Query: 181 ---IKQRNEEKVKFKNRGSNKTEQ-----AEKMKRFNPEAAKEIIVKDLKQKKKPRQVES 240
KQR EE+ + KN GSNKTEQ +K K +PE AKE ++ DLK++KK R+ S
Sbjct: 181 SGEFKQRKEEEERCKNGGSNKTEQLSASKTKKKKTLDPEEAKEFVLIDLKEQKKSRRRVS 240
Query: 241 -------------------------------------ESSSSSDELISPVSVLE-----R 300
ES SSDE SPVSVL+ R
Sbjct: 241 NKRTSKISTKEHRHGRLRGGGSVPERVTNGRKATRRVESDCSSDE-SSPVSVLDCSQFLR 300
Query: 301 DS-TPLSGDASSN------RRKLSPDL----------DDGLIIKEGKSTKTKVIYNGVRP 346
DS P SGDA+S+ RRKLSP+L DD LII E K K K +G +
Sbjct: 301 DSGAPSSGDAASSSSPTHPRRKLSPELEISQSPSPRNDDDLIINEVKIAKAKGGGDGTQQ 360
BLAST of Sed0010018 vs. ExPASy TrEMBL
Match:
A0A6J1K8I1 (uncharacterized protein LOC111492651 OS=Cucurbita maxima OX=3661 GN=LOC111492651 PE=4 SV=1)
HSP 1 Score: 369.8 bits (948), Expect = 1.3e-98
Identity = 238/395 (60.25%), Postives = 279/395 (70.63%), Query Frame = 0
Query: 3 LLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEETN 62
LLPS SCSS+SSFS S+FD + CNPRA+A+PSCLSGILRRILCSGSLPTHPSD ITEETN
Sbjct: 4 LLPSPSCSSTSSFSASNFDAHVCNPRAAATPSCLSGILRRILCSGSLPTHPSDQITEETN 63
Query: 63 SVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSVEH 122
S+KS+D VK+V V+ TNEAKP+AGIVARLMGLD MP+MKQN N+IA +QS+NSVEH
Sbjct: 64 SLKSED---NVKNVGVMKDTNEAKPTAGIVARLMGLDTMPDMKQNCNSIARTQSMNSVEH 123
Query: 123 FFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESRIKQRNEEK 182
F+KHLEG+HKGV+S SFREIPTF+EL+NE+YFILSFEG++K++EFKAK R EEK
Sbjct: 124 FYKHLEGKHKGVRSTQSFREIPTFLELENEDYFILSFEGDSKNEEFKAKARR---HGEEK 183
Query: 183 VKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------------ 242
+NRGSNKTE + K K FNPE AKE ++ DLKQKKK R+ S
Sbjct: 184 C--QNRGSNKTEHSYVRKTKKKIFNPEEAKEFVLIDLKQKKKSRKRVSRNKPTSRISTKD 243
Query: 243 ----------ESSSSSDELISPVSVLE-----RDS---TPLSGDASS-----NRRKLSPD 302
ES SSDEL SPVSVL+ RDS PLSGDA+S +RRKLSP+
Sbjct: 244 RHGRRSTRKVESEQSSDEL-SPVSVLDSSEFLRDSEEAAPLSGDAASKSPVNSRRKLSPE 303
Query: 303 L---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELL-SESNWIKCSK 349
L DD LIIKEG KT+ I EE IC+I+EMEL+ S N+ K +
Sbjct: 304 LEISQRRSLDDDDLIIKEGNPAKTRAI---------EEEICKITEMELVKSIWNYRKFCE 363
BLAST of Sed0010018 vs. TAIR 10
Match:
AT5G58630.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 68.6 bits (166), Expect = 1.2e-11
Identity = 110/395 (27.85%), Postives = 173/395 (43.80%), Query Frame = 0
Query: 1 MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEE 60
M PS + S S T SF C+S IL+R LCSG+ T+PSD ITE
Sbjct: 3 MKSSPSPASSLSLGSKTRSF-------------GCISIILQRFLCSGTSSTYPSDLITEP 62
Query: 61 TNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSV 120
S KS D + G VARLMGLD +P + + ++ S S+N +
Sbjct: 63 --SFKSRD--------FIPEPLRGRGDGPGAVARLMGLDSIPVIDKT-RFLSRSHSVNHL 122
Query: 121 EHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEF---KAKESRIKQ 180
+ ++G+H+ VKS + ++EL+++++FILSFE + KE K+ R +
Sbjct: 123 KRDDDEIQGKHRRVKSTLE------YVELEDDDFFILSFEKDKNDKELGTRNCKKRRDTR 182
Query: 181 RNEEKVKFKNRGSNKTEQAEKMKRFNPEAAKEI--IVKDLKQKKKPRQVESESS------ 240
N+ K + + K M EI +++ K+K+K R+ E+
Sbjct: 183 ENQSKTEDQTHLEGKENNINAMNVSPGRERLEIGELMQRRKEKRKSRRKRKETKLRQNIE 242
Query: 241 -----------SSSDELI-------------------SPVSVLERDS------TPLSGDA 300
S ++L+ SPVSVL+ D TP G+
Sbjct: 243 KENWVQSNGCWSKEEDLVNCEVRSTKEEEECGSCDDSSPVSVLDYDRYAGVRVTPSPGNI 302
Query: 301 SSNRRKLSPDLDDGLI---IKEGKSTKT-KVIYNGVRPERFEE---GICEISEMELLSES 341
S RR+LS +L+ + I++ T T + +R ++E IC+++ + L S
Sbjct: 303 S--RRRLSSELESSKLNETIEQDHITLTSRSKDQEIRLHGYQEMWLMICKLTVSD-LEGS 362
BLAST of Sed0010018 vs. TAIR 10
Match:
AT5G01370.1 (ALC-interacting protein 1 )
HSP 1 Score: 50.1 bits (118), Expect = 4.3e-06
Identity = 80/297 (26.94%), Postives = 127/297 (42.76%), Query Frame = 0
Query: 28 RASASPSCLSGILRRILCSGSLPTHPSDHIT------------EETNSVKSDDKL---LQ 87
RA+ CL+ ++RR+LCSGS THPSD+I EE K + K Q
Sbjct: 4 RANPKTGCLTAVVRRLLCSGSQQTHPSDNILDSDETLQLLISYEENEEPKKEIKTETETQ 63
Query: 88 VKDVSVLNATNEAKPSAGIVARLMGLD-PMPEMKQ------NHNTIAGSQSLNSVEHFFK 147
DVS+ P +VA+LMGLD P P K+ + + + S+S+N +++ K
Sbjct: 64 NDDVSL--HPPPPPPPPNVVAKLMGLDHPAPGSKRFRYFDDSGSAVTRSKSVNFMDYILK 123
Query: 148 HLEGRHKG------------VKSAVSFREI-PTFIELQNEN------YFILSFEGEAKSK 207
E + VK++VSFREI PT + N + +L + + +
Sbjct: 124 GHEEEEENEDEKDGQRQCRRVKASVSFREIVPTSARWSSNNQQKKHDFLLLYLDKLDEKR 183
Query: 208 EFKAKESRIKQRNEEKVKFKNRGSNKTEQAEKMKRFNPEAAKEIIVKDLKQKKKPRQVES 267
E S + + EKV ++ A K K+ N + AK K K +PR+V
Sbjct: 184 ELVGSSSFSRSKRFEKVVEDSKKPPLPPSAPK-KKENEKVAK-------KFKDEPRKVAK 243
Query: 268 ESSSSSDELISPVSVLERDSTPLSGDASSNRRKLSPDLD----DGLIIKEGKSTKTK 280
+ S + ++ + +P +SS + L + D I KE +S + K
Sbjct: 244 KKKSENRNDVNGAKKVRWFLSPSKSKSSSEKTALLGESKNIRADEFIGKESESPENK 290
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038896059.1 | 8.2e-108 | 61.19 | uncharacterized protein LOC120084230 [Benincasa hispida] | [more] |
KAA0031834.1 | 8.7e-102 | 59.16 | transcriptional regulator ATRX-like protein isoform X2 [Cucumis melo var. makuwa... | [more] |
XP_008457365.1 | 8.7e-102 | 59.16 | PREDICTED: uncharacterized protein LOC103497072 [Cucumis melo] >TYJ97302.1 trans... | [more] |
XP_022150887.1 | 1.2e-98 | 58.00 | uncharacterized protein LOC111018930 [Momordica charantia] | [more] |
XP_022997806.1 | 2.6e-98 | 60.25 | uncharacterized protein LOC111492651 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BBU9 | 4.2e-102 | 59.16 | Transcriptional regulator ATRX-like protein isoform X2 OS=Cucumis melo var. maku... | [more] |
A0A5A7SKY9 | 4.2e-102 | 59.16 | Transcriptional regulator ATRX-like protein isoform X2 OS=Cucumis melo var. maku... | [more] |
A0A1S3C6M1 | 4.2e-102 | 59.16 | uncharacterized protein LOC103497072 OS=Cucumis melo OX=3656 GN=LOC103497072 PE=... | [more] |
A0A6J1DBZ9 | 5.7e-99 | 58.00 | uncharacterized protein LOC111018930 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1K8I1 | 1.3e-98 | 60.25 | uncharacterized protein LOC111492651 OS=Cucurbita maxima OX=3661 GN=LOC111492651... | [more] |
Match Name | E-value | Identity | Description | |
AT5G58630.1 | 1.2e-11 | 27.85 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... | [more] |
AT5G01370.1 | 4.3e-06 | 26.94 | ALC-interacting protein 1 | [more] |