Sed0010018 (gene) Chayote v1

Overview
NameSed0010018
Typegene
OrganismSechium edule (Chayote v1)
DescriptionVARLMGL domain-containing protein
LocationLG01: 8675254 .. 8676384 (-)
RNA-Seq ExpressionSed0010018
SyntenySed0010018
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTTGCTGCCTTCACACTCTTGCTCTTCCTCTTCTTCCTTCTCCACTTCCAGTTTTGATGGCAATGCCTGCAATCCCAGAGCTTCAGCTTCTCCTAGCTGCCTCTCGGGGATTCTCCGCCGAATTCTCTGCTCGGGTAGCCTCCCGACGCACCCGTCGGATCATATCACAGAAGAAACCAACTCAGTGAAGTCTGATGACAAGCTTTTACAAGTCAAGGATGTGAGTGTCCTCAATGCAACAAATGAGGCCAAGCCCAGTGCTGGAATTGTGGCAAGGCTGATGGGTTTGGATCCCATGCCCGAGATGAAGCAGAATCATAACACGATAGCAGGAAGCCAATCCTTGAACTCTGTGGAGCATTTCTTCAAACACCTTGAAGGCAGGCATAAAGGGGTCAAATCAGCAGTGTCATTTAGAGAGATACCCACCTTTATTGAGCTTCAAAATGAGAATTACTTCATACTTAGCTTTGAAGGAGAAGCCAAAAGTAAAGAATTCAAAGCAAAAGAAAGTAGAATCAAGCAAAGAAATGAAGAGAAAGTCAAATTTAAAAACAGGGGAAGCAACAAAACAGAACAGGCAGAGAAAATGAAGAGATTCAATCCAGAGGCAGCCAAAGAAATCATCGTAAAAGATTTGAAACAGAAGAAGAAACCAAGACAAGTAGAATCCGAGTCAAGCTCCAGCTCCGACGAATTAATAAGCCCAGTCTCAGTTCTCGAAAGAGATTCAACTCCATTATCAGGTTTGAATTCCTTTTTTTCAACAAACCCTAATTCAGATTCTTCAATTGGGTTTCTCAAATTCCCTTAATCACTACTTTCAGGAGACGCCTCTTCGAATCGAAGGAAATTATCACCGGATCTTGACGATGGTTTAATTATCAAGGAAGGAAAATCCACGAAGACGAAAGTAATTTACAATGGGGTTAGGCCAGAAAGATTTGAAGAAGGGATTTGTGAGATATCAGAAATGGAATTATTGAGCGAATCCAATTGGATCAAATGCAGCAAAATTAGTGAAGAACTTGACGTTGGAGGTATAATTGAAGGTTTTGATTCCTATATTCTTGATGGATTGATAGAGGAATTTGTAGAACAGATGTATGATTCGATCTTCTTCTGA

mRNA sequence

ATGAACTTGCTGCCTTCACACTCTTGCTCTTCCTCTTCTTCCTTCTCCACTTCCAGTTTTGATGGCAATGCCTGCAATCCCAGAGCTTCAGCTTCTCCTAGCTGCCTCTCGGGGATTCTCCGCCGAATTCTCTGCTCGGGTAGCCTCCCGACGCACCCGTCGGATCATATCACAGAAGAAACCAACTCAGTGAAGTCTGATGACAAGCTTTTACAAGTCAAGGATGTGAGTGTCCTCAATGCAACAAATGAGGCCAAGCCCAGTGCTGGAATTGTGGCAAGGCTGATGGGTTTGGATCCCATGCCCGAGATGAAGCAGAATCATAACACGATAGCAGGAAGCCAATCCTTGAACTCTGTGGAGCATTTCTTCAAACACCTTGAAGGCAGGCATAAAGGGGTCAAATCAGCAGTGTCATTTAGAGAGATACCCACCTTTATTGAGCTTCAAAATGAGAATTACTTCATACTTAGCTTTGAAGGAGAAGCCAAAAGTAAAGAATTCAAAGCAAAAGAAAGTAGAATCAAGCAAAGAAATGAAGAGAAAGTCAAATTTAAAAACAGGGGAAGCAACAAAACAGAACAGGCAGAGAAAATGAAGAGATTCAATCCAGAGGCAGCCAAAGAAATCATCGTAAAAGATTTGAAACAGAAGAAGAAACCAAGACAAGTAGAATCCGAGTCAAGCTCCAGCTCCGACGAATTAATAAGCCCAGTCTCAGTTCTCGAAAGAGATTCAACTCCATTATCAGGAGACGCCTCTTCGAATCGAAGGAAATTATCACCGGATCTTGACGATGGTTTAATTATCAAGGAAGGAAAATCCACGAAGACGAAAGTAATTTACAATGGGGTTAGGCCAGAAAGATTTGAAGAAGGGATTTGTGAGATATCAGAAATGGAATTATTGAGCGAATCCAATTGGATCAAATGCAGCAAAATTAGTGAAGAACTTGACGTTGGAGGTATAATTGAAGGTTTTGATTCCTATATTCTTGATGGATTGATAGAGGAATTTGTAGAACAGATGTATGATTCGATCTTCTTCTGA

Coding sequence (CDS)

ATGAACTTGCTGCCTTCACACTCTTGCTCTTCCTCTTCTTCCTTCTCCACTTCCAGTTTTGATGGCAATGCCTGCAATCCCAGAGCTTCAGCTTCTCCTAGCTGCCTCTCGGGGATTCTCCGCCGAATTCTCTGCTCGGGTAGCCTCCCGACGCACCCGTCGGATCATATCACAGAAGAAACCAACTCAGTGAAGTCTGATGACAAGCTTTTACAAGTCAAGGATGTGAGTGTCCTCAATGCAACAAATGAGGCCAAGCCCAGTGCTGGAATTGTGGCAAGGCTGATGGGTTTGGATCCCATGCCCGAGATGAAGCAGAATCATAACACGATAGCAGGAAGCCAATCCTTGAACTCTGTGGAGCATTTCTTCAAACACCTTGAAGGCAGGCATAAAGGGGTCAAATCAGCAGTGTCATTTAGAGAGATACCCACCTTTATTGAGCTTCAAAATGAGAATTACTTCATACTTAGCTTTGAAGGAGAAGCCAAAAGTAAAGAATTCAAAGCAAAAGAAAGTAGAATCAAGCAAAGAAATGAAGAGAAAGTCAAATTTAAAAACAGGGGAAGCAACAAAACAGAACAGGCAGAGAAAATGAAGAGATTCAATCCAGAGGCAGCCAAAGAAATCATCGTAAAAGATTTGAAACAGAAGAAGAAACCAAGACAAGTAGAATCCGAGTCAAGCTCCAGCTCCGACGAATTAATAAGCCCAGTCTCAGTTCTCGAAAGAGATTCAACTCCATTATCAGGAGACGCCTCTTCGAATCGAAGGAAATTATCACCGGATCTTGACGATGGTTTAATTATCAAGGAAGGAAAATCCACGAAGACGAAAGTAATTTACAATGGGGTTAGGCCAGAAAGATTTGAAGAAGGGATTTGTGAGATATCAGAAATGGAATTATTGAGCGAATCCAATTGGATCAAATGCAGCAAAATTAGTGAAGAACTTGACGTTGGAGGTATAATTGAAGGTTTTGATTCCTATATTCTTGATGGATTGATAGAGGAATTTGTAGAACAGATGTATGATTCGATCTTCTTCTGA

Protein sequence

MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSVEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESRIKQRNEEKVKFKNRGSNKTEQAEKMKRFNPEAAKEIIVKDLKQKKKPRQVESESSSSSDELISPVSVLERDSTPLSGDASSNRRKLSPDLDDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNWIKCSKISEELDVGGIIEGFDSYILDGLIEEFVEQMYDSIFF
Homology
BLAST of Sed0010018 vs. NCBI nr
Match: XP_038896059.1 (uncharacterized protein LOC120084230 [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 8.2e-108
Identity = 246/402 (61.19%), Postives = 295/402 (73.38%), Query Frame = 0

Query: 1   MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEE 60
           M LLPS SCSSSSSFSTS+FD + CNPR  A+PSCLSGILRRILCSGSLPTHP+DHITEE
Sbjct: 1   MKLLPSPSCSSSSSFSTSTFDAHVCNPR--ATPSCLSGILRRILCSGSLPTHPTDHITEE 60

Query: 61  TNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSV 120
           T+SVKSDDKLLQVKD++V+ +TNE KP+AGIVARLMGLD MPEMKQNHN+++ SQS+NSV
Sbjct: 61  TSSVKSDDKLLQVKDLNVIKSTNETKPTAGIVARLMGLDSMPEMKQNHNSLSRSQSMNSV 120

Query: 121 EHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIKQ 180
           EHF+KHLE +H+ V+S +SFRE+PTF+EL+NE YFILSFEGE+KSKEFKAK    +   Q
Sbjct: 121 EHFYKHLEDKHQRVRSTLSFREVPTFLELENEEYFILSFEGESKSKEFKAKVRNSTEFNQ 180

Query: 181 RNEEKVKFKNRGSNKTEQAE----KMKRFNPEAAKEIIVKDLKQKKKPRQVES------- 240
           R E++ K+KNRGSNKTEQ+     K KRF+PE +K+ +  DLK+KKK R+  S       
Sbjct: 181 RKEDEDKYKNRGSNKTEQSSVRKTKKKRFDPEESKQFVQIDLKEKKKSRKRFSKNKPTSR 240

Query: 241 ---------------ESSSSSDELISPVSVLE--------RDSTPLSGDASSN-----RR 300
                          ES  SSDEL SPVSVL+         ++  LSGDA+SN     RR
Sbjct: 241 ISTKDRHGRKSTRQVESDCSSDEL-SPVSVLDSNQFLRDPEEAISLSGDAASNSPINTRR 300

Query: 301 KLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNWI 349
           KLS +L         DD LII  GK  K KV+ +G++ ER+E+ IC+I+EME L ESNW 
Sbjct: 301 KLSSELEIPKTPSRNDDDLIINGGKIAKKKVV-DGIQRERYEKEICKITEME-LEESNW- 360

BLAST of Sed0010018 vs. NCBI nr
Match: KAA0031834.1 (transcriptional regulator ATRX-like protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 381.3 bits (978), Expect = 8.7e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0

Query: 1   MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
           M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1   MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60

Query: 61  ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
           ET+SVKSDDK+L  KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++  SQS+NS
Sbjct: 61  ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120

Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
           VEH +K+L+ +H+ V+S  SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K       K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180

Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
           QRNE++ K K+RGSNKTEQ+     K K F+PE AK+ ++ DLK+KKK R+  S      
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240

Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
                           ES  SSDEL SPVSVL        + +ST L+GD +SN     R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPIYPR 300

Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
           RKLS +          DD LI+  GK  KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360

BLAST of Sed0010018 vs. NCBI nr
Match: XP_008457365.1 (PREDICTED: uncharacterized protein LOC103497072 [Cucumis melo] >TYJ97302.1 transcriptional regulator ATRX-like protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 381.3 bits (978), Expect = 8.7e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0

Query: 1   MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
           M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1   MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60

Query: 61  ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
           ET+SVKSDDK+L  KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++  SQS+NS
Sbjct: 61  ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120

Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
           VEH +K+L+ +H+ V+S  SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K       K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180

Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
           QRNE++ K K+RGSNKTEQ+     K K F+PE AK+ ++ DLK+KKK R+  S      
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240

Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
                           ES  SSDEL SPVSVL        + +ST L+GD +SN     R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPINPR 300

Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
           RKLS +          DD LI+  GK  KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360

BLAST of Sed0010018 vs. NCBI nr
Match: XP_022150887.1 (uncharacterized protein LOC111018930 [Momordica charantia])

HSP 1 Score: 370.9 bits (951), Expect = 1.2e-98
Identity = 243/419 (58.00%), Postives = 282/419 (67.30%), Query Frame = 0

Query: 1   MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEE 60
           M LLPS SCSSSSSFSTS+FD N CNPR  A+PSCLSGILRRILCSGSLPTHPSD I EE
Sbjct: 1   MKLLPSPSCSSSSSFSTSTFDANVCNPR--ATPSCLSGILRRILCSGSLPTHPSDQIMEE 60

Query: 61  TNSVKSD-DKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
            NSVKSD DK+LQVKDVS + ATNE KPSAGIVARLMGLDPMPEMK N N I+ SQS+NS
Sbjct: 61  ANSVKSDSDKVLQVKDVSAIKATNEGKPSAGIVARLMGLDPMPEMKLNQNLISRSQSMNS 120

Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESR----- 180
           +EHF+KHLEG+H+ ++S +SFREIPTF+EL+NE+YFILSFEGE++SKEF+ KE R     
Sbjct: 121 LEHFYKHLEGKHQRIRSTLSFREIPTFLELENEDYFILSFEGESRSKEFRPKERRRSERR 180

Query: 181 ---IKQRNEEKVKFKNRGSNKTEQ-----AEKMKRFNPEAAKEIIVKDLKQKKKPRQVES 240
               KQR EE+ + KN GSNKTEQ      +K K  +PE AKE ++ DLK++KK R+  S
Sbjct: 181 SGEFKQRKEEEERCKNGGSNKTEQLSASKTKKKKTLDPEEAKEFVLIDLKEQKKSRRRVS 240

Query: 241 -------------------------------------ESSSSSDELISPVSVLE-----R 300
                                                ES  SSDE  SPVSVL+     R
Sbjct: 241 NKRTSKISTKEHRHGRLRGGGSVPERVTNGRKATRRVESDCSSDE-SSPVSVLDCSQFLR 300

Query: 301 DS-TPLSGDASSN------RRKLSPDL----------DDGLIIKEGKSTKTKVIYNGVRP 346
           DS  P SGDA+S+      RRKLSP+L          DD LII E K  K K   +G + 
Sbjct: 301 DSGAPSSGDAASSSSPTHPRRKLSPELEISQSPSPRNDDDLIINEVKIAKAKGGGDGTQQ 360

BLAST of Sed0010018 vs. NCBI nr
Match: XP_022997806.1 (uncharacterized protein LOC111492651 [Cucurbita maxima])

HSP 1 Score: 369.8 bits (948), Expect = 2.6e-98
Identity = 238/395 (60.25%), Postives = 279/395 (70.63%), Query Frame = 0

Query: 3   LLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEETN 62
           LLPS SCSS+SSFS S+FD + CNPRA+A+PSCLSGILRRILCSGSLPTHPSD ITEETN
Sbjct: 4   LLPSPSCSSTSSFSASNFDAHVCNPRAAATPSCLSGILRRILCSGSLPTHPSDQITEETN 63

Query: 63  SVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSVEH 122
           S+KS+D    VK+V V+  TNEAKP+AGIVARLMGLD MP+MKQN N+IA +QS+NSVEH
Sbjct: 64  SLKSED---NVKNVGVMKDTNEAKPTAGIVARLMGLDTMPDMKQNCNSIARTQSMNSVEH 123

Query: 123 FFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESRIKQRNEEK 182
           F+KHLEG+HKGV+S  SFREIPTF+EL+NE+YFILSFEG++K++EFKAK  R     EEK
Sbjct: 124 FYKHLEGKHKGVRSTQSFREIPTFLELENEDYFILSFEGDSKNEEFKAKARR---HGEEK 183

Query: 183 VKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------------ 242
              +NRGSNKTE +     K K FNPE AKE ++ DLKQKKK R+  S            
Sbjct: 184 C--QNRGSNKTEHSYVRKTKKKIFNPEEAKEFVLIDLKQKKKSRKRVSRNKPTSRISTKD 243

Query: 243 ----------ESSSSSDELISPVSVLE-----RDS---TPLSGDASS-----NRRKLSPD 302
                     ES  SSDEL SPVSVL+     RDS    PLSGDA+S     +RRKLSP+
Sbjct: 244 RHGRRSTRKVESEQSSDEL-SPVSVLDSSEFLRDSEEAAPLSGDAASKSPVNSRRKLSPE 303

Query: 303 L---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELL-SESNWIKCSK 349
           L         DD LIIKEG   KT+ I         EE IC+I+EMEL+ S  N+ K  +
Sbjct: 304 LEISQRRSLDDDDLIIKEGNPAKTRAI---------EEEICKITEMELVKSIWNYRKFCE 363

BLAST of Sed0010018 vs. ExPASy TrEMBL
Match: A0A5D3BBU9 (Transcriptional regulator ATRX-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001010 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 4.2e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0

Query: 1   MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
           M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1   MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60

Query: 61  ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
           ET+SVKSDDK+L  KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++  SQS+NS
Sbjct: 61  ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120

Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
           VEH +K+L+ +H+ V+S  SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K       K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180

Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
           QRNE++ K K+RGSNKTEQ+     K K F+PE AK+ ++ DLK+KKK R+  S      
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240

Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
                           ES  SSDEL SPVSVL        + +ST L+GD +SN     R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPINPR 300

Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
           RKLS +          DD LI+  GK  KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360

BLAST of Sed0010018 vs. ExPASy TrEMBL
Match: A0A5A7SKY9 (Transcriptional regulator ATRX-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00840 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 4.2e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0

Query: 1   MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
           M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1   MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60

Query: 61  ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
           ET+SVKSDDK+L  KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++  SQS+NS
Sbjct: 61  ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120

Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
           VEH +K+L+ +H+ V+S  SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K       K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180

Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
           QRNE++ K K+RGSNKTEQ+     K K F+PE AK+ ++ DLK+KKK R+  S      
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240

Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
                           ES  SSDEL SPVSVL        + +ST L+GD +SN     R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPIYPR 300

Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
           RKLS +          DD LI+  GK  KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360

BLAST of Sed0010018 vs. ExPASy TrEMBL
Match: A0A1S3C6M1 (uncharacterized protein LOC103497072 OS=Cucumis melo OX=3656 GN=LOC103497072 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 4.2e-102
Identity = 239/404 (59.16%), Postives = 287/404 (71.04%), Query Frame = 0

Query: 1   MNLLPSHSCSSSSSFSTSSFDGNACNPR-ASASPSCLSGILRRILCSGSLPTHPSDHITE 60
           M LLPS SCSSSSSFS+S+FD + CNPR A+A+PSCLSGILRRILCSGSLPTHP+DHITE
Sbjct: 1   MKLLPSPSCSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITE 60

Query: 61  ETNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
           ET+SVKSDDK+L  KD++V+ +TNE K +AGIVARLMGLD MPEMKQNHN++  SQS+NS
Sbjct: 61  ETSSVKSDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEMKQNHNSLLRSQSMNS 120

Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAK---ESRIK 180
           VEH +K+L+ +H+ V+S  SFRE+PTF+EL+NE+YFILSFEGE KSKEFK K       K
Sbjct: 121 VEHLYKYLDNKHQQVRSTKSFREVPTFLELENEDYFILSFEGERKSKEFKPKVRNSRAFK 180

Query: 181 QRNEEKVKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------ 240
           QRNE++ K K+RGSNKTEQ+     K K F+PE AK+ ++ DLK+KKK R+  S      
Sbjct: 181 QRNEDEDKCKHRGSNKTEQSYVRKTKKKIFDPEEAKQFVLIDLKEKKKSRKRVSRNKPTS 240

Query: 241 ----------------ESSSSSDELISPVSVL--------ERDSTPLSGDASSN-----R 300
                           ES  SSDEL SPVSVL        + +ST L+GD +SN     R
Sbjct: 241 RISTKDRHGRKPTRKVESECSSDEL-SPVSVLDSSEFLRDQEESTQLTGDTASNSPINPR 300

Query: 301 RKLSPDL---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELLSESNW 349
           RKLS +          DD LI+  GK  KTK I NG++ ER+EE IC I+EME L ESNW
Sbjct: 301 RKLSTEHEIPQNPSRDDDDLIVNGGKIAKTKGIDNGIQRERYEEEICMITEME-LGESNW 360

BLAST of Sed0010018 vs. ExPASy TrEMBL
Match: A0A6J1DBZ9 (uncharacterized protein LOC111018930 OS=Momordica charantia OX=3673 GN=LOC111018930 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.7e-99
Identity = 243/419 (58.00%), Postives = 282/419 (67.30%), Query Frame = 0

Query: 1   MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEE 60
           M LLPS SCSSSSSFSTS+FD N CNPR  A+PSCLSGILRRILCSGSLPTHPSD I EE
Sbjct: 1   MKLLPSPSCSSSSSFSTSTFDANVCNPR--ATPSCLSGILRRILCSGSLPTHPSDQIMEE 60

Query: 61  TNSVKSD-DKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNS 120
            NSVKSD DK+LQVKDVS + ATNE KPSAGIVARLMGLDPMPEMK N N I+ SQS+NS
Sbjct: 61  ANSVKSDSDKVLQVKDVSAIKATNEGKPSAGIVARLMGLDPMPEMKLNQNLISRSQSMNS 120

Query: 121 VEHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESR----- 180
           +EHF+KHLEG+H+ ++S +SFREIPTF+EL+NE+YFILSFEGE++SKEF+ KE R     
Sbjct: 121 LEHFYKHLEGKHQRIRSTLSFREIPTFLELENEDYFILSFEGESRSKEFRPKERRRSERR 180

Query: 181 ---IKQRNEEKVKFKNRGSNKTEQ-----AEKMKRFNPEAAKEIIVKDLKQKKKPRQVES 240
               KQR EE+ + KN GSNKTEQ      +K K  +PE AKE ++ DLK++KK R+  S
Sbjct: 181 SGEFKQRKEEEERCKNGGSNKTEQLSASKTKKKKTLDPEEAKEFVLIDLKEQKKSRRRVS 240

Query: 241 -------------------------------------ESSSSSDELISPVSVLE-----R 300
                                                ES  SSDE  SPVSVL+     R
Sbjct: 241 NKRTSKISTKEHRHGRLRGGGSVPERVTNGRKATRRVESDCSSDE-SSPVSVLDCSQFLR 300

Query: 301 DS-TPLSGDASSN------RRKLSPDL----------DDGLIIKEGKSTKTKVIYNGVRP 346
           DS  P SGDA+S+      RRKLSP+L          DD LII E K  K K   +G + 
Sbjct: 301 DSGAPSSGDAASSSSPTHPRRKLSPELEISQSPSPRNDDDLIINEVKIAKAKGGGDGTQQ 360

BLAST of Sed0010018 vs. ExPASy TrEMBL
Match: A0A6J1K8I1 (uncharacterized protein LOC111492651 OS=Cucurbita maxima OX=3661 GN=LOC111492651 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 1.3e-98
Identity = 238/395 (60.25%), Postives = 279/395 (70.63%), Query Frame = 0

Query: 3   LLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEETN 62
           LLPS SCSS+SSFS S+FD + CNPRA+A+PSCLSGILRRILCSGSLPTHPSD ITEETN
Sbjct: 4   LLPSPSCSSTSSFSASNFDAHVCNPRAAATPSCLSGILRRILCSGSLPTHPSDQITEETN 63

Query: 63  SVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSVEH 122
           S+KS+D    VK+V V+  TNEAKP+AGIVARLMGLD MP+MKQN N+IA +QS+NSVEH
Sbjct: 64  SLKSED---NVKNVGVMKDTNEAKPTAGIVARLMGLDTMPDMKQNCNSIARTQSMNSVEH 123

Query: 123 FFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEFKAKESRIKQRNEEK 182
           F+KHLEG+HKGV+S  SFREIPTF+EL+NE+YFILSFEG++K++EFKAK  R     EEK
Sbjct: 124 FYKHLEGKHKGVRSTQSFREIPTFLELENEDYFILSFEGDSKNEEFKAKARR---HGEEK 183

Query: 183 VKFKNRGSNKTEQA----EKMKRFNPEAAKEIIVKDLKQKKKPRQVES------------ 242
              +NRGSNKTE +     K K FNPE AKE ++ DLKQKKK R+  S            
Sbjct: 184 C--QNRGSNKTEHSYVRKTKKKIFNPEEAKEFVLIDLKQKKKSRKRVSRNKPTSRISTKD 243

Query: 243 ----------ESSSSSDELISPVSVLE-----RDS---TPLSGDASS-----NRRKLSPD 302
                     ES  SSDEL SPVSVL+     RDS    PLSGDA+S     +RRKLSP+
Sbjct: 244 RHGRRSTRKVESEQSSDEL-SPVSVLDSSEFLRDSEEAAPLSGDAASKSPVNSRRKLSPE 303

Query: 303 L---------DDGLIIKEGKSTKTKVIYNGVRPERFEEGICEISEMELL-SESNWIKCSK 349
           L         DD LIIKEG   KT+ I         EE IC+I+EMEL+ S  N+ K  +
Sbjct: 304 LEISQRRSLDDDDLIIKEGNPAKTRAI---------EEEICKITEMELVKSIWNYRKFCE 363

BLAST of Sed0010018 vs. TAIR 10
Match: AT5G58630.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-11
Identity = 110/395 (27.85%), Postives = 173/395 (43.80%), Query Frame = 0

Query: 1   MNLLPSHSCSSSSSFSTSSFDGNACNPRASASPSCLSGILRRILCSGSLPTHPSDHITEE 60
           M   PS + S S    T SF              C+S IL+R LCSG+  T+PSD ITE 
Sbjct: 3   MKSSPSPASSLSLGSKTRSF-------------GCISIILQRFLCSGTSSTYPSDLITEP 62

Query: 61  TNSVKSDDKLLQVKDVSVLNATNEAKPSAGIVARLMGLDPMPEMKQNHNTIAGSQSLNSV 120
             S KS D         +           G VARLMGLD +P + +    ++ S S+N +
Sbjct: 63  --SFKSRD--------FIPEPLRGRGDGPGAVARLMGLDSIPVIDKT-RFLSRSHSVNHL 122

Query: 121 EHFFKHLEGRHKGVKSAVSFREIPTFIELQNENYFILSFEGEAKSKEF---KAKESRIKQ 180
           +     ++G+H+ VKS +       ++EL+++++FILSFE +   KE      K+ R  +
Sbjct: 123 KRDDDEIQGKHRRVKSTLE------YVELEDDDFFILSFEKDKNDKELGTRNCKKRRDTR 182

Query: 181 RNEEKVKFKNRGSNKTEQAEKMKRFNPEAAKEI--IVKDLKQKKKPRQVESESS------ 240
            N+ K + +     K      M         EI  +++  K+K+K R+   E+       
Sbjct: 183 ENQSKTEDQTHLEGKENNINAMNVSPGRERLEIGELMQRRKEKRKSRRKRKETKLRQNIE 242

Query: 241 -----------SSSDELI-------------------SPVSVLERDS------TPLSGDA 300
                      S  ++L+                   SPVSVL+ D       TP  G+ 
Sbjct: 243 KENWVQSNGCWSKEEDLVNCEVRSTKEEEECGSCDDSSPVSVLDYDRYAGVRVTPSPGNI 302

Query: 301 SSNRRKLSPDLDDGLI---IKEGKSTKT-KVIYNGVRPERFEE---GICEISEMELLSES 341
           S  RR+LS +L+   +   I++   T T +     +R   ++E    IC+++  + L  S
Sbjct: 303 S--RRRLSSELESSKLNETIEQDHITLTSRSKDQEIRLHGYQEMWLMICKLTVSD-LEGS 362

BLAST of Sed0010018 vs. TAIR 10
Match: AT5G01370.1 (ALC-interacting protein 1 )

HSP 1 Score: 50.1 bits (118), Expect = 4.3e-06
Identity = 80/297 (26.94%), Postives = 127/297 (42.76%), Query Frame = 0

Query: 28  RASASPSCLSGILRRILCSGSLPTHPSDHIT------------EETNSVKSDDKL---LQ 87
           RA+    CL+ ++RR+LCSGS  THPSD+I             EE    K + K     Q
Sbjct: 4   RANPKTGCLTAVVRRLLCSGSQQTHPSDNILDSDETLQLLISYEENEEPKKEIKTETETQ 63

Query: 88  VKDVSVLNATNEAKPSAGIVARLMGLD-PMPEMKQ------NHNTIAGSQSLNSVEHFFK 147
             DVS+        P   +VA+LMGLD P P  K+      + + +  S+S+N +++  K
Sbjct: 64  NDDVSL--HPPPPPPPPNVVAKLMGLDHPAPGSKRFRYFDDSGSAVTRSKSVNFMDYILK 123

Query: 148 HLEGRHKG------------VKSAVSFREI-PTFIELQNEN------YFILSFEGEAKSK 207
             E   +             VK++VSFREI PT     + N      + +L  +   + +
Sbjct: 124 GHEEEEENEDEKDGQRQCRRVKASVSFREIVPTSARWSSNNQQKKHDFLLLYLDKLDEKR 183

Query: 208 EFKAKESRIKQRNEEKVKFKNRGSNKTEQAEKMKRFNPEAAKEIIVKDLKQKKKPRQVES 267
           E     S  + +  EKV   ++       A K K+ N + AK       K K +PR+V  
Sbjct: 184 ELVGSSSFSRSKRFEKVVEDSKKPPLPPSAPK-KKENEKVAK-------KFKDEPRKVAK 243

Query: 268 ESSSSSDELISPVSVLERDSTPLSGDASSNRRKLSPDLD----DGLIIKEGKSTKTK 280
           +  S +   ++    +    +P    +SS +  L  +      D  I KE +S + K
Sbjct: 244 KKKSENRNDVNGAKKVRWFLSPSKSKSSSEKTALLGESKNIRADEFIGKESESPENK 290

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038896059.18.2e-10861.19uncharacterized protein LOC120084230 [Benincasa hispida][more]
KAA0031834.18.7e-10259.16transcriptional regulator ATRX-like protein isoform X2 [Cucumis melo var. makuwa... [more]
XP_008457365.18.7e-10259.16PREDICTED: uncharacterized protein LOC103497072 [Cucumis melo] >TYJ97302.1 trans... [more]
XP_022150887.11.2e-9858.00uncharacterized protein LOC111018930 [Momordica charantia][more]
XP_022997806.12.6e-9860.25uncharacterized protein LOC111492651 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BBU94.2e-10259.16Transcriptional regulator ATRX-like protein isoform X2 OS=Cucumis melo var. maku... [more]
A0A5A7SKY94.2e-10259.16Transcriptional regulator ATRX-like protein isoform X2 OS=Cucumis melo var. maku... [more]
A0A1S3C6M14.2e-10259.16uncharacterized protein LOC103497072 OS=Cucumis melo OX=3656 GN=LOC103497072 PE=... [more]
A0A6J1DBZ95.7e-9958.00uncharacterized protein LOC111018930 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1K8I11.3e-9860.25uncharacterized protein LOC111492651 OS=Cucurbita maxima OX=3661 GN=LOC111492651... [more]
Match NameE-valueIdentityDescription
AT5G58630.11.2e-1127.85unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
AT5G01370.14.3e-0626.94ALC-interacting protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032795DUF3741-associated sequence motifPFAMPF14383VARLMGLcoord: 90..103
e-value: 9.6E-5
score: 21.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..203
NoneNo IPR availablePANTHERPTHR35499:SF1OS05G0128300 PROTEINcoord: 1..344
NoneNo IPR availablePANTHERPTHR35499OS05G0128300 PROTEINcoord: 1..344

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0010018.1Sed0010018.1mRNA