Sed0009986 (gene) Chayote v1

Overview
NameSed0009986
Typegene
OrganismSechium edule (Chayote v1)
Descriptionhistone H4
LocationLG03: 2112960 .. 2116482 (-)
RNA-Seq ExpressionSed0009986
SyntenySed0009986
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGGCCGTGGAAAAGGAGGCAAGGGATTGGGAAAGGGCGGAGCAAAGCGTCACAGGAAGGTGTTGAGGGACAACATCCAAGGCATTACCAAGCCTGCAATTCGGCGATTGGCTCGCAGAGGCGGAGTGAAGCGAATCAGCGGCTTGATCTATGAGGAAACCAGAGGCGTGTTGAAGATCTTTCTTGAGAACGTGATTCGCGATGCGGTGACCTACACCGAGCACGCTCGGAGGAAGACGGTCACCGCCATGGACGTGGTCTATGCGCTCAAGAGGCAGGGACGGACCTTGTACGGTTTCGGCGGTTAGGTTAGAGATCGCGATTGATTCTGGATATTCTCTTTAGATCTGGTTTCTTCTTGCTATTGCTGTTCAGATTTAGGATTTCTCTAATCTACTGTTCTATTGTTCAAATTCTGAAACGCTTACTTTGTTTAAAAAATATGAATTAATCTGATTTGGTTTCACTCCGTTCACTAATCTCATGTCTAATAATTGGCTTGGAAACAGAATTTGTTGCTATGGTGAAATAGAATTGATTTTGCAGTTTTTGTTAATTGTTTCGATCCGGAGAACTGGATTCAAGAACAGTTATGGCACTTTCTGTTGTTTCTGTTCTTGGAGGATTGGTAGCAAAAGCTTTGAACATCGTGAATTGACACTTAGGTTCAACTAATATTTTAAGGTGTGGCTTCTGTTAAAATTGTTTACACGAATAGAGCAGGGTCGCAGCTAAAGAGAGATTGAAAATTACAATGGTAATGAAGAGGAAGAAGAGGAAGAACGACACAATGATTTTACGTGGAAAACCCCTAAACAAATTAGGGTAAAAACCACGGCAGGATAGAAGAACTTTATTACAAAAATAGGAGTTCTGGCCTTTCTCTCTACAAAGAAACAACAAGCTTTCTTACAAAGAGAAAACACTCTCTATTTTTATCTCACAACCTCACTTTAGATGTGGGAAGTCTTGGGATGATTTGGGATGGTTTGCCAACAAATGACATAACCTATTTATAGCCTCCATAAACTTGGGCTCCAAGTATGATCCAATGGTCCACATTTTGCCTTGTAATCAAGTCAAATAAATGGCTAGGATTTTGCCACAACTTGGATTTGGATAAGGATGTCTAGATATTTCTTTGCAAGTTGAAGTTCTAGATTTTTCTTTGACCATCTAGGATAAATGATAAAATCTAGAGTTTTCTTTTGGCTATAACTTCTAGATTTTCTTTGGACCTAAATTCTCTTTTGTTGGGCCATAATATTTAACAATCTTCCACTTGGAGATTTGATTGATCCATCAATAAATCTCCACACCGTTCTTTCTTCCTTGCCATCTCCATGTTGCTTATGTTTCTGCTAGGCCATTCGCGGATCGACACCAATCAAACTTGTCACCATTGACTGCCTTGGTCAGATAATCTGCCAGGTTTTCTTTTGTATGAATTTTCTGCATATCCACTGTTCCTTCTTCCACTTTCTCACGAACAAAGTGGTACTGCACTCGAATATGTTTTGACTTGGAATGGAAAGCTGGATTCCTTGCAAGGTACAAGGCACTCTGATCGTCACAAAACAGAGAAATATTCTTCTTAGCGTGCTCGAGTTCATCCATTAACATTTTTAACCATACCGCTCTTTACTAGCTTGTGTAGCCGCAACATACTCTGCTTTACATTGTCGAGGTAGCCACAATCTGATCATTTTGAAACCCGACTTTATACTCCGCTAGCAAGAGTGAACACATATCCAGTGGTGGATTTGCTTTTATCAAAATCACCTGCATAATCTGAGTCAACATATCCTCTGACAATAAAGTCTGATCCTCCATAACATAATGCAACATCTATCGATCCTTTAATATATCTAAGGATCCTTTTTACAGCATTCCAATGCTCTCGACCAGATTCGCCATGTGCCGACTAACTACTCCCACTTTGCATGTGCAATGTCCGGTCCGGTACAAATCATGGCAAACATTAAACTTCCCACTTCTTGATGCATACGGTGCTCGAGACATCTCCATCCTCTCCGCTTCACCGCTAGGGCACATACTAGAGGATAATTTGAAATTAACAGAAAGAGGGGTAGAAATTGGCTTACGAGTCTTCCATGTTGAAGCGTCGTAAGACTTTCCTTAAATAGTTTCTCAGAGATAGCCAAATCTTTCTATTATTTCTGTCTCGGTGAATTTGCATCCCTGAATCTTGTTTGCTAGCCCCAAGTCCTTCATTTCAAACTCCCTAGCCAATCGAGCCTTCAATTCTTTAATACGATCTTTGTTGGGGCTGCTACCAACATGTCGTCAACATACAACAAACAAGATAATGAAATCTTTTTCACTAAACCTCTTGAAATATGCACAAGGGTCATTAAGTCTCATTGTATTCAAGGCTCATGATGAAGGAATCAAATCTCTTGTACCAACATCTCGCGCTGTTTGAGACCATACAGAGATTTGTTCAACCTCAAACCAAGTTCTCTTTTCCTTGTTCTTCAAAACCTTACGGTTTGGAGCATATAGATTTCTTCTTCAAGATCACCATGGAGAAATGCGCTTTTACATCTAATCGCTCCCGGATGTAAATCAAATGTAGCACACATTGCTAAGACTATTCTAACGATGAGTAAGTCGAACTCTTCGGAGAAAAGATTTCATTGAAGTCGATACCTTCTTTACGAGCATATCCTTTTACCACCAATCTTGCGATACCGCTCCACTTGATCATCATTGTTGCGCTTGATCTTATATACCCATTTGTTACCAATGGGCTTTCTTCCCTGTGGTAGCGTTACAAGTTCCCAAGTCTTGTTCTTATGAAGAGCTTCCATTTCTTCATGCATAGTCATCATCCATCGAGCGAAGATCTCAACTAGTCATTGCCTCTTGGAATGTTAATGGCTCTCCATCCTCGCTTAGAAGACAATATGCAATGTTACTCTCCATAATATAATCGGGCCGCCAATCGGGTGGTTTTGTCGTTCGGATAGAACGGCGAGTCTCTTGTGACTCAACCGGATCTTGTATCTCGTGTGTTGGTTCGACTTGAGTGGTCATCTTCATATTCTTTCTCCACATGTACCGTTGTAGTCTCTGAGCTTTCATTGACAAGTGCTATCATTTGCTATCTGTTTCTTATCTTCCATGAAGATCACATCCTGCGATGATAACCTTGTGGGAAGTGGGATCCCACAGCGATACCCTTTCACACCATCAGCGTACCTAAGAATAAACATTTTCTGGATTTTGGATCCGCTTTTGTAGTTTCTTGGGTATTGTACATCACGTACTGCTGGACTTCCAAATATATGGAGGTTTGAATAATCAACAAGCTTACAGGTCCATCTCTGCATTGGTGTCTTCAACTCAATTGCGATTGATGGAGCACGATTCACTACATAACAAAGTATTGGTCGCTTCGCGCGAAATGATTTGTCCAAGCCTGCAGCTCCTAACATTGCTCTTGTTCTCTCTAACAAGGTTCTATTCATCCGCTCTGCCACTCCATTTCTTTGA

mRNA sequence

ATGTCAGGCCGTGGAAAAGGAGGCAAGGGATTGGGAAAGGGCGGAGCAAAGCGTCACAGGAAGGTGTTGAGGGACAACATCCAAGGCATTACCAAGCCTGCAATTCGGCGATTGGCTCGCAGAGGCGGAGTGAAGCGAATCAGCGGCTTGATCTATGAGGAAACCAGAGGCGTGTTGAAGATCTTTCTTGAGAACGTGATTCGCGATGCGGTGACCTACACCGAGCACGCTCGGAGGAAGACGGTCACCGCCATGGACGTGGTCTATGCGCTCAAGAGGCAGGGACGGACCTTTGGTACTGCACTCGAATATGTTTTGACTTGGAATGGAAAGCTGGATTCCTTGCAAGGTACAAGGCACTCTGATCGATCCTTTTTACAGCATTCCAATGCTCTCGACCAGATTCGCCATGTGCCGACTAACTACTCCCACTTTGCATGTGCAATGTCCGCATATCCTTTTACCACCAATCTTGCGATACCGCTCCACTTGATCATCATTGTTGCGCTTGATCTTATATACCCATTTGTTACCAATGGGCTTTCTTCCCTTATTGGTCGCTTCGCGCGAAATGATTTGTCCAAGCCTGCAGCTCCTAACATTGCTCTTGTTCTCTCTAACAAGGTTCTATTCATCCGCTCTGCCACTCCATTTCTTTGA

Coding sequence (CDS)

ATGTCAGGCCGTGGAAAAGGAGGCAAGGGATTGGGAAAGGGCGGAGCAAAGCGTCACAGGAAGGTGTTGAGGGACAACATCCAAGGCATTACCAAGCCTGCAATTCGGCGATTGGCTCGCAGAGGCGGAGTGAAGCGAATCAGCGGCTTGATCTATGAGGAAACCAGAGGCGTGTTGAAGATCTTTCTTGAGAACGTGATTCGCGATGCGGTGACCTACACCGAGCACGCTCGGAGGAAGACGGTCACCGCCATGGACGTGGTCTATGCGCTCAAGAGGCAGGGACGGACCTTTGGTACTGCACTCGAATATGTTTTGACTTGGAATGGAAAGCTGGATTCCTTGCAAGGTACAAGGCACTCTGATCGATCCTTTTTACAGCATTCCAATGCTCTCGACCAGATTCGCCATGTGCCGACTAACTACTCCCACTTTGCATGTGCAATGTCCGCATATCCTTTTACCACCAATCTTGCGATACCGCTCCACTTGATCATCATTGTTGCGCTTGATCTTATATACCCATTTGTTACCAATGGGCTTTCTTCCCTTATTGGTCGCTTCGCGCGAAATGATTTGTCCAAGCCTGCAGCTCCTAACATTGCTCTTGTTCTCTCTAACAAGGTTCTATTCATCCGCTCTGCCACTCCATTTCTTTGA

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTFGTALEYVLTWNGKLDSLQGTRHSDRSFLQHSNALDQIRHVPTNYSHFACAMSAYPFTTNLAIPLHLIIIVALDLIYPFVTNGLSSLIGRFARNDLSKPAAPNIALVLSNKVLFIRSATPFL
Homology
[Close]
BLAST of Sed0009986 vs. NCBI nr
Match: XP_020580277.1 (uncharacterized protein LOC110024573 [Phalaenopsis equestris])

HSP 1 Score: 191.8 bits (486), Expect = 6.2e-45
Identity = 102/115 (88.70%), Postives = 105/115 (91.30%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT---FGTALEYVLTWNGKL 113
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT   FG  L ++  W+  L
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGGLAFLFLWSFNL 115

[Close]
BLAST of Sed0009986 vs. NCBI nr
Match: KAE8646972.1 (hypothetical protein Csa_021021 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-44
Identity = 116/174 (66.67%), Postives = 132/174 (75.86%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT-FGTALEYVLTWNGKLDSLQGTR 120
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT +G  + ++   +G    L+G +
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVFFLFKIDGGSAVLKGLK 120

Query: 121 HSDRSFL----QHSNALDQIRHVPTNYSHFACAMSA-YPF--TTNLAIPLHLII 167
            S R FL    Q  +   ++ HV   +   AC+    +P+  TT++    H II
Sbjct: 121 -SRRPFLIGKKQEDSMSSEVEHVGI-WCRGACSFGVPFPWLRTTSVNYSFHKII 172

[Close]
BLAST of Sed0009986 vs. NCBI nr
Match: KAG6485895.1 (hypothetical protein ZIOFF_054462 [Zingiber officinale])

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-44
Identity = 104/121 (85.95%), Postives = 108/121 (89.26%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT---FGTALEYVLTWNGKLDSLQG 119
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT   FG  L  +    G+LD ++ 
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGRLVALARKIGRLDQVRK 120

[Close]
BLAST of Sed0009986 vs. NCBI nr
Match: KAG6411252.1 (hypothetical protein SASPL_129330 [Salvia splendens])

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-44
Identity = 100/112 (89.29%), Postives = 103/112 (91.96%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTFGTALEYVLTWNGKL 113
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT     ++ + W G L
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL-YGFDFAVNWKGDL 111

[Close]
BLAST of Sed0009986 vs. NCBI nr
Match: XP_022133641.1 (uncharacterized protein LOC111006180 [Momordica charantia])

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-44
Identity = 105/124 (84.68%), Postives = 108/124 (87.10%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 13  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 72

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT---FGTALEYVLTWNGKL-DSLQ 120
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT   FG +  Y  T + +L DS  
Sbjct: 73  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGASRHYFTTSDSQLPDSTN 132

[Close]
BLAST of Sed0009986 vs. ExPASy Swiss-Prot
Match: P62785 (Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

[Close]
BLAST of Sed0009986 vs. ExPASy Swiss-Prot
Match: P59259 (Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

[Close]
BLAST of Sed0009986 vs. ExPASy Swiss-Prot
Match: Q6PMI5 (Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3)

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

[Close]
BLAST of Sed0009986 vs. ExPASy Swiss-Prot
Match: Q6WZ83 (Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3)

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

[Close]
BLAST of Sed0009986 vs. ExPASy Swiss-Prot
Match: Q6LAF3 (Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3)

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

[Close]
BLAST of Sed0009986 vs. ExPASy TrEMBL
Match: A0A6J1BVP5 (Histone H4 OS=Momordica charantia OX=3673 GN=LOC111006180 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 6.6e-45
Identity = 105/124 (84.68%), Postives = 108/124 (87.10%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 13  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 72

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT---FGTALEYVLTWNGKL-DSLQ 120
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT   FG +  Y  T + +L DS  
Sbjct: 73  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGASRHYFTTSDSQLPDSTN 132

[Close]
BLAST of Sed0009986 vs. ExPASy TrEMBL
Match: A0A4D9BMK5 (Histone H4 OS=Salvia splendens OX=180675 GN=Saspl_018762 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 6.6e-45
Identity = 100/112 (89.29%), Postives = 103/112 (91.96%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTFGTALEYVLTWNGKL 113
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT     ++ + W G L
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL-YGFDFAVNWKGDL 111

[Close]
BLAST of Sed0009986 vs. ExPASy TrEMBL
Match: A0A0E0ECW1 (Histone H4 OS=Oryza meridionalis OX=40149 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 8.7e-45
Identity = 104/126 (82.54%), Postives = 109/126 (86.51%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT---FGTALEYVLTWNGKLDSLQG 120
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT   FG  +  +   N   D++  
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGRGVLKIFLENVIRDAVTY 120

Query: 121 TRHSDR 124
           T H+ R
Sbjct: 121 TEHARR 126

[Close]
BLAST of Sed0009986 vs. ExPASy TrEMBL
Match: A0A553NPY7 (Histone H4 OS=Tigriopus californicus OX=6832 GN=TCAL_03755 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 104/132 (78.79%), Postives = 114/132 (86.36%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT---FGTALEYVLTWNGKLDSLQG 120
           +FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRT   FG  L  +++  GK   ++G
Sbjct: 61  VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGEYLSEIMSGRGKGGKVKG 120

Query: 121 --TRHSDRSFLQ 128
                S+R+ LQ
Sbjct: 121 KAKSRSNRAGLQ 132

[Close]
BLAST of Sed0009986 vs. ExPASy TrEMBL
Match: A0A6P5LF57 (Histone H4 OS=Phascolarctos cinereus OX=38626 GN=LOC110216660 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 100/114 (87.72%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT---FGTALEYVLTWNGK 112
           +FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRT   FG  L  +++  GK
Sbjct: 61  VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGGCLAVIMSGRGK 114

[Close]
BLAST of Sed0009986 vs. TAIR 10
Match: AT1G07660.1 (Histone superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 3.2e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

[Close]
BLAST of Sed0009986 vs. TAIR 10
Match: AT1G07820.1 (Histone superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 3.2e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

[Close]
BLAST of Sed0009986 vs. TAIR 10
Match: AT1G07820.2 (Histone superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 3.2e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

[Close]
BLAST of Sed0009986 vs. TAIR 10
Match: AT2G28740.1 (histone H4 )

HSP 1 Score: 186.0 bits (471), Expect = 3.2e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

[Close]
BLAST of Sed0009986 vs. TAIR 10
Match: AT3G45930.1 (Histone superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 3.2e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 98
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97

The following BLAST results are available for this feature:
BLAST of Sed0009986 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_020580277.16.2e-4588.70uncharacterized protein LOC110024573 [Phalaenopsis equestris][more]
KAE8646972.11.1e-4466.67hypothetical protein Csa_021021 [Cucumis sativus][more]
KAG6485895.11.4e-4485.95hypothetical protein ZIOFF_054462 [Zingiber officinale][more]
KAG6411252.11.4e-4489.29hypothetical protein SASPL_129330 [Salvia splendens][more]
XP_022133641.11.4e-4484.68uncharacterized protein LOC111006180 [Momordica charantia][more]
BLAST of Sed0009986 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P627854.4e-46100.00Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2[more]
P592594.4e-46100.00Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2[more]
Q6PMI54.4e-46100.00Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3[more]
Q6WZ834.4e-46100.00Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3[more]
Q6LAF34.4e-46100.00Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3[more]
BLAST of Sed0009986 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BVP56.6e-4584.68Histone H4 OS=Momordica charantia OX=3673 GN=LOC111006180 PE=3 SV=1[more]
A0A4D9BMK56.6e-4589.29Histone H4 OS=Salvia splendens OX=180675 GN=Saspl_018762 PE=3 SV=1[more]
A0A0E0ECW18.7e-4582.54Histone H4 OS=Oryza meridionalis OX=40149 PE=3 SV=1[more]
A0A553NPY71.1e-4478.79Histone H4 OS=Tigriopus californicus OX=6832 GN=TCAL_03755 PE=3 SV=1[more]
A0A6P5LF571.5e-4487.72Histone H4 OS=Phascolarctos cinereus OX=38626 GN=LOC110216660 PE=3 SV=1[more]
BLAST of Sed0009986 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07660.13.2e-47100.00Histone superfamily protein [more]
AT1G07820.13.2e-47100.00Histone superfamily protein [more]
AT1G07820.23.2e-47100.00Histone superfamily protein [more]
AT2G28740.13.2e-47100.00histone H4 [more]
AT3G45930.13.2e-47100.00Histone superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 20..39
score: 93.38
coord: 62..76
score: 95.1
coord: 89..100
score: 73.04
coord: 77..89
score: 90.05
coord: 5..16
score: 95.59
coord: 40..60
score: 93.56
IPR001951Histone H4SMARTSM00417h44coord: 16..90
e-value: 2.0E-29
score: 113.7
IPR001951Histone H4CDDcd00076H4coord: 18..98
e-value: 1.97478E-47
score: 149.188
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 39..97
e-value: 6.7E-8
score: 32.6
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..100
e-value: 6.5E-54
score: 182.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..97
NoneNo IPR availablePANTHERPTHR10484:SF185HISTONE H4coord: 1..98
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 1..98
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0009986.1Sed0009986.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0000786 nucleosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity