![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0009916 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCCATGTGAAAAAAAAAAAAAAGTTCACTTGAAATTGTGTTTCATGATGTCAAAGTATTGAAAATAAAAATAATAAAAAATTGATCATATATTGGAGAGGTAAGTAGATCTCTTAGCATTTATAAGATAGATGAGCTTCCCCATTTATTATCAATTGATTTTGAGTAGAGCTCCATACTAATCTAATACGATATCAGAGCCTATTAAAACGAAATCTATTATGTCCCATAAAAATAAAATTTAGATCCGATTCGAAATTAACCATAAGAGGCATTATCTTGAACATGCATGCTAATGATCCCACATTGGAAAAGTGAGGAAGTCTCACAATCATTATAAAACCGTGGACTCTTCTCATGTCAATTAATTTTGAGATGGAACCTCATGCTATTTAATTCCTCCATAGACCCTAAAGGATGTACATCGTTGTTGGATTAAATTGAAGAAGAAGAATAATAAGAAACAATGAAGACATTAACTGCTAGGGCATCATCCTTCTCTCACCCCTTCACATGTCTTAAAGTCATGGTCCATAGAAATGTTTGTATGATGTGACTTAACATTCTCTAGTTTTTCTAGATCTCCATGGTTTTGGACTTGATGCCTTCATCATTTTCTTTTTGTCATTGTGCTTGGAAAAGTGTCACACCTTGTTTGAAATGGAAACTTTGAAGGCATGTCTTTTTTTTTTTTTCTTTTTTTGAGTTTAACAACAATTCGAAGTAAGGGATTTGAACATTTGACCTCTTGGTCATGGGAACACGCTTATACTAATGAGTTGTTGCTCTTGTTTTGAAGGCATGTCTTACCTTGCTTGCATGTACTCTTGACTGATACATATCCTGCAGGTGTCCTGTTTGGAAACAACCTTAATTTTTCAGACAGGGATTTAATTTTGCATTTTCAATGGGATGCTGCTGGACTAAGGTAGGCTCACTTGAAGTTCATCTCTTTTCTTTCTCTCTATTTTTTTCTTTTATTGTATATGCTTAGGCTGTTGTATTGGATTTCTTGTATATGTGCTCTTTGCTTGTTTGCAAGCTCAGCAGTTTCTGCCATGTCTTTTGTACATTTTCTTTTTTTATCTGTGAGTGTCCCGGTCAATTTATGCGTAACGGTACATTTTGTTTTCATTTATCAAGTTCCTGGGTCATATTGGTTCCTCGTAAGACATTACCAAGTGGAGGCTTGAAATACATAACACTTTGCTTCTGTAGATTCTTATCTGAAGTTCCACTTTTTCCATTCTGCTAATGGTCAATGTTGATTTATTTTCACTTTCCTCATTTGCTTGATGTCAATGCCCTACCTTGTGTCAATTCAATATTTGGTAATTTTCTTTTACATCTCATGTGATAGTTTTTTTATAAAAAAAAAATTATAATGTCTGGGACTGTTTGAGTCAACTTATATATATCTTTTGATTATTCTCACGGGACATACCACCTGACCAGTAAGGGGCCCTCATTCTTGATACTCGACTCAAAATATATTGAAGATGGTCCTCCTAATCGTTAGATGCATTGTTAAACCCTAGCTTTTATTTAAAAATCCGTAAACCATGTTGTTTCAACCTACTGAAATAAATTTTTTCTTCTAAGTGAGTTACAACTTCCAACTTACATCCACATTTGACATTTTGCAGTTTTTCAATAGTCATCCAGAAGACTTTGAAGACCAGAATGTTGATAGCAAAAACGTACACCTCATTACGTCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCAACCCAAGATGGAAAGATTGTAAGTTTCTCCTGGAGTTTCATTTCTTGAATGTTTGGATGATCATTTTAGAACCGGATCGTGTTCAAGTAAGTTCGTCTAGCTTACTTGTTCATTGAGTTTGACATAAAAATATATTTGGGATGTTTGTCTTTATATAACTGAATCATGAAGAAAAATATGCGTAGAGAGCATTGTTTTTACCTTAAGACTATGCAACAGGTCATTGCGAATTTCAGTGCATCATGGTGTAGACCTTCTAAATCCATGGCGCCCGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCGATTGATGTCGACGAGCTAGCTGTAAGTTAAACTACTTTTTTCGTTACTCTTTGTGTATTTATGTTCATGTTTTTAGGGCATAGATGAATATGAATCTAGCTACCGTCCTTGGCAATCTTGTTGGTGGAAACTTAGAGTCTCTAAGGTATTTTCCCTTTGAAGGTTTCAGACTCGAAACCCACGAGTGAAACTAATTATAAAATTATTTGTTGGGATGGGTGCGAAAGCCCCAAATAAGTAGTGGTGGGAAGCTTCAATTCCTGATTTTATATGTATGCTTTCGTTTCTTATTCCAACTCTTTTTTAAAAAAGTTGTTTTCAGAAAAAGAAAATTAAGAACTTGTTTAATATTTTTTTTTTGGTATATGTATTTTTGTTTTATATAGTTGAGTTGGGTAATCATTTTTATTTTGTCCTCTAAAATTTCCAAATTATTATATAATTCATTAAATTTAGAAATTATAGCTAGTATGTTTTTGAAAAACTAAGAAACCAAAAAATATGATACTTGGAGACTTCATTATTGGAATCGATTTCAAATTACCCCTTTTTGTTTCTTTTCTGTTTTTAGTTCTTAACTGACTACTCTAATATTCCAATAATATTCACTTTCGCATTTACAAATTACAATACTAAAAATCAATAATCATCATGAGTTGACCTAATAGTTATAAGAGTATGGAAGGTTTAACATATTATGAATTCGATCAATGGTGGTCACATATCTAAAAATTAATTTTCTATATTTTTCTTTGACATCGAAATATTATGGGATGAGGGATCTTTTGTGAGAAAGTTGAGATGCGCGTAACTGGTTAGGACCCTTAAGGATATAAAAAAAAAATCAAAAAATTAGAAAATATTATCAAAATAGTCTTTAATTTTAAAAAGTTATAATTTGATAAGGTTTAGATTACTGTTTTACATTGTGATTTGAATACAAATATCTGTTATTGATCGCAGGAGCTTAGTAAATCCTGGGAAATCAAAGCCACTCCAACATTCGTGATATTTAAGGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGAGAAATCAGATCTGCAACAGAAGATAGCTGCATTGAATGAATCAGTAATCAAACCACAGAGTTGA ATGTTTCCATGTGAAAAAAAAAAAAAATTTTTCAATAGTCATCCAGAAGACTTTGAAGACCAGAATGTTGATAGCAAAAACGTACACCTCATTACGTCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCAACCCAAGATGGAAAGATTGTCATTGCGAATTTCAGTGCATCATGGTGTAGACCTTCTAAATCCATGGCGCCCGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCGATTGATGTCGACGAGCTAGCTGAGCTTAGTAAATCCTGGGAAATCAAAGCCACTCCAACATTCGTGATATTTAAGGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGAGAAATCAGATCTGCAACAGAAGATAGCTGCATTGAATGAATCAGTAATCAAACCACAGAGTTGA ATGTTTCCATGTGAAAAAAAAAAAAAATTTTTCAATAGTCATCCAGAAGACTTTGAAGACCAGAATGTTGATAGCAAAAACGTACACCTCATTACGTCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCAACCCAAGATGGAAAGATTGTCATTGCGAATTTCAGTGCATCATGGTGTAGACCTTCTAAATCCATGGCGCCCGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCGATTGATGTCGACGAGCTAGCTGAGCTTAGTAAATCCTGGGAAATCAAAGCCACTCCAACATTCGTGATATTTAAGGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGAGAAATCAGATCTGCAACAGAAGATAGCTGCATTGAATGAATCAGTAATCAAACCACAGAGTTGA MFPCEKKKKFFNSHPEDFEDQNVDSKNVHLITSMEKWEAKLLEATQDGKIVIANFSASWCRPSKSMAPAFCELADKYTSMVFLAIDVDELAELSKSWEIKATPTFVIFKDGRQVDKLVGAEKSDLQQKIAALNESVIKPQS Homology
BLAST of Sed0009916 vs. NCBI nr
Match: XP_038890472.1 (thioredoxin H4-1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 229.6 bits (584), Expect = 1.7e-56 Identity = 117/134 (87.31%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of Sed0009916 vs. NCBI nr
Match: XP_008459484.1 (PREDICTED: thioredoxin H-type [Cucumis melo]) HSP 1 Score: 221.5 bits (563), Expect = 4.7e-54 Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Sed0009916 vs. NCBI nr
Match: XP_038890471.1 (thioredoxin H4-1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 221.1 bits (562), Expect = 6.1e-54 Identity = 112/127 (88.19%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of Sed0009916 vs. NCBI nr
Match: XP_004141512.2 (thioredoxin H4-1 isoform X1 [Cucumis sativus] >KGN52589.1 hypothetical protein Csa_008226 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 1.0e-53 Identity = 111/128 (86.72%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Sed0009916 vs. NCBI nr
Match: XP_011656041.1 (thioredoxin H-type isoform X2 [Cucumis sativus]) HSP 1 Score: 218.4 bits (555), Expect = 4.0e-53 Identity = 110/126 (87.30%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34 Identity = 69/126 (54.76%), Postives = 96/126 (76.19%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-33 Identity = 64/110 (58.18%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 4.0e-32 Identity = 64/119 (53.78%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.3e-30 Identity = 62/116 (53.45%), Postives = 86/116 (74.14%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy Swiss-Prot
Match: Q8GXV2 (Thioredoxin-like protein CXXS2 OS=Arabidopsis thaliana OX=3702 GN=CXXS2 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-30 Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy TrEMBL
Match: A0A1S3CBI4 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.3e-54 Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy TrEMBL
Match: A0A0A0KUM3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.0e-54 Identity = 111/128 (86.72%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy TrEMBL
Match: A0A6J1JH67 (thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.6e-52 Identity = 109/128 (85.16%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy TrEMBL
Match: A0A6J1H8J4 (thioredoxin H4-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461044 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.6e-52 Identity = 109/128 (85.16%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of Sed0009916 vs. ExPASy TrEMBL
Match: A0A6J1JRL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50 Identity = 104/128 (81.25%), Postives = 115/128 (89.84%), Query Frame = 0
BLAST of Sed0009916 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 ) HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34 Identity = 64/110 (58.18%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of Sed0009916 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 ) HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34 Identity = 64/110 (58.18%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of Sed0009916 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 ) HSP 1 Score: 133.3 bits (334), Expect = 1.6e-31 Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 0
BLAST of Sed0009916 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein ) HSP 1 Score: 132.1 bits (331), Expect = 3.5e-31 Identity = 60/111 (54.05%), Postives = 79/111 (71.17%), Query Frame = 0
BLAST of Sed0009916 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 ) HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21 Identity = 39/97 (40.21%), Postives = 70/97 (72.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|