Sed0009906 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATCTCTGGACTTAAAAATTCTATTAAATATTTTTACTGTGCAATGCTACAAATGGGCTGGCAGGTTTCTGAGTTTCTCAGAGAAGAGAAAATGAAGTTACTGGCGTGTCACGCGCGTACTAGTTAACAATGAGCAGAAAGATCAGTGGCTAGAAAACACAAAAGTGGGCCACTCCTCATTTGATGCCATCGTTTACAATTACCCTCTGAAAAGCCACTGCCTTTATTTTGTATTGAAACATACCCCTCCACTTCAGGGTTTATTACATTTTCACTCCCAAGCACAGTCTCTCCTTCTCTCTTTCTCTCTGTGTGGGTTAGAGCTTTTTTTTCTGGGGCACCATCTCTGAGCTTTGTAATCATGTCTTGTGTGATGCCTGTTTTAGCCATTGGGTTCCTTATTCTGGCCATGACTGGCCACTCAAGTAAGTTCCCTGTATGTGGTGTTTTTGTTCTAACTTCTGTGCTGACCAATGGTATATACTTGTATTTCCTTTTCTTTTGCTTCTCTTTTTAGTTTGATTTCTCATTTATCTTTTTTCCCTTTCAAGCATTTTGCTTCTGGGTCGTTTTTAAAGCTCAATGTGCGTTTGACCCTCTTCACAGAAGTGTAACAACACTTATTCTTCTAGTCATGTTCACCTTTAGGCTTTGTTTTTAGTTTGAAATCTGTGGTTCTTTTTTGTGTTTCTGTGAGTTTGCAGTGCTAGATCTTGTTGTCTTGTACTAGTTTGTTTCTTTTGGCCCTTATTTGGAATGTTGGTTTTTGGAACTTGTAGGCTGTGTAGACATTTTGCTTGTGAGTCATTTTTAAAGCTCAATGTGCATTTGACCCTCTTTACAGAAGTGTAACAACACATCTTCTTCTAGTTTGAAATTTGTGGTTCCTTTTAGCGTTTTCTGTGAGTTTCCAGTACTTCTTAGATGTCTAGATCTCTTTGTGTTTGGTTTATTTTCTTCTGTTCTTCTACAGTGCTTCTTTGTTTCTTGTGGCTCTCTTTTGAAGTGTTGGGTTTTGGAACTTGTAGGTGCAACATGGTGTGTTTGCAAGGATGGATTGGGAGATGCAGCTCTTCAGAAGACACTGGACTATGCTTGTGGAGCTGGAGGTGACTGTGTACCTATTCATCAAAATGGGGGTTGTTTTGCTCCCAACACTGTCAAGGCTCATTGTTCCTATGCTGCTAACAGCTATTTCCAGAGGAAGGGCCAAGCTCCTGGCTCCTGTGATTTTTCTGGCACAGCAATGGTCATTCCTACTGACCCCAGTAAGATTTACTTCTCTGTATTCAAACTGTTTTCTCTAGTTTCCTCTAAAGATTTGGTCAGTTTAGATCTGGTGAATTCAAGAGATGAAAATGGAAATAAACCCAACTTGGAACACTAACTCAAATCAAAAGTTCCTTGGCCATATATTTCAGCTACTTAACTCTAATATATCTTGGTTGTATCTTTTCTTTCATTTTGAGACATGGAATCTGATTTTTCTTTTCTTTTTTTCTTGGTGTCTTTTAGGCATGTCAGGTTGTGTTTATCCCTCTAGCGCCAGGTATGATTCTGCACCTATCTTCACCTTGTTTATTTGAAAAAAAAAATAGAAAGGTAGTCCCCAAGAGGTAGCCTTGTTGCTGGAGGCTTGGGGCTTTCAAGACATGCTTCATGTTTAAGCCCCACGAGTGAGTTTGATTGTAAATCCCTTGTAGTCTCTTGGATCCGTGTCTAGAGATAGACGCGGGTCTAGTTATAGTGGAGCAAAGCTCCATTTTCTCAATTTCAAAAACAAAATCGAAGTTACAATTTGTTCCCATTTACGGCCATCATTTATTATAACAAGGCTTTACTCTGCTTCCACATGCAAGAATGAATTATGAATTTGGAGGGACAATGAAATTCCCTCTAGGTGTGACTGAGCATAATGTTGTAGGGACAGGTGTATGTCGGGTTAGAATACTCGAAATGCACTTAAGCTATGGATATCAGAAAGAAAAAAATGCATATGCTTGCATCTAATTCTCATTTAGTGAACTTTGTCTCTTGAAATGAATTAAAATTATGTTTAGCTTTCTGCCTCCTTTTTGCGTTCATTATGAGTTTCACCTGGATTTTTTTATGGACTTCGATCTTGTTCATTAGTGATATATTTAAAGTATTCTACTTCATTTATGTTATTTTTTTCATTTAAATTAACGGGGAACCTTTTTACTTCAAAAGGAGCTTGTATCTAGTTAATTAAAGACACAAAAACAAATATCAAAGTAAGCTTTTGATAATCATATATACTGTTGGAAAAGATGCCTTTTGCCATTAGATTCGCCATCATCCCATTGTGTTATAATCATAGATACCCTTTTTGTCAATTGACTATATTGTAATTTCATGATCATTTTTTCTGCCTCCTTCCCTTAGATTGCGTTTTTCATCATTTCACTTTCACTCAGGGGTGATTGGATTTAGGGGTTGGAAGAGGAGTGAAGAGGAAATTATTCCAACTTTATATTTGTTTTTTTTGTGCATCAAAAGAAAAAAAAAACATCTCTTTTCAAAACACAAATTCTCAAAAAAAATAAATTAACGTCTCTTCTTCAAAACATCAATTTTCAAACCTCTTCCTCTCCTCTCTTCTCTCGAACTCCAAAGTCCAATTACCCCGTGAAGTGGTTATAATTGTTGCCCCTCTGGTTGTCACTTGTTTTTTTTACCGTCCGTGATACATAATTACTGGTAAATATATTTATTGGAAAGATTATGGTAAGTTGAAAAATGGAGCTTTTCATAACTGATCAGGTTTATGTTTCGTCCTCGAGATATGGGATATTTTGAGATTTGAGCCAACATTTTTACTGCATCGAAAGCTAAGTCTAGGAGTCTAGGCAGACGATGATTTTTTGAAGAAAGGGTTTCACATGTGGAGGGAACAACTTGTTTGTCTTGGAGCTAATTTGAAATGCTCTTGTCAAAAACTGGTTAGGGGGTGTTTGGGGCAAGGGGAATGGTGATGATTAAGGGGGAAATGGTAATAAGGAGGAGAATAGGGAGGGGAATGATTATGGGAGTAATGATTATTTGTGTTTGGGGTGAAGGTAATGATTATGGAGAGAATGATTATTTGTGTTTGAGATAAAGGTAATAATTATGAAAAAAATACAATAATGAATATGATGTGAGTAAAAAATAGTGATGTGATGTATGAAAAGTTATTAGAGAGAGAATAAAAAGTAGTTATAGAGAGAATGAAAAAAGTGGTTTTTGGAAAACGTGATTATGTGAAGAATGATTTCTGTTGGTCCAAACACGGGGAATCATTTCTTTTCCCATTCTCCTTATTCTTGGTGGCTCAAATACTCCCTTACTGGGCTCAGATTTTTTTTCCAGTAGAAAATATGAGATGAATCTTTTATATATATATATATATATATATATATATATATATATGAGATGAATCTTAAACGATGACAATTTTTCTTTATCTTCATAAAGATGTAGAAGAAAAATAGCTGGTTTATCCAAAACAAAGCATTTACTTTTATGAACCCAAACTTTTGAGATAGTCAGATGAACATCTTGTTTTTAGTTCAGTTTTTTAAAAATTGTACTTGAAAATTTGTATCTTTCTTAAAGAAACTTTGATTCTTTGCCCGAAGAACAAAAGAACAAGATTTTATTAATGGCTTACTTTTTTGGTTTTCAAAATTTGGATTTTGGAAATATGTGTTAAATATAAAAACTATGAGCAAAACTTATCAACTTGTTGTTAGTTGGTAAGTATGGTGTGTACAATTACCACCATGTGAGTCACATTTTTTTTATTTAGTTATTTTTAAAATTATCAAAATATGTTAAATCAATCATTTCATCTACTATTTTTCTTTGTATTAATAAAAAAGATGTGGCTTATATGGTGGTAAGTGTACATATCATACTTACCAACAAGCAGGAAAGTTTTTTTCGTAAACTATTGGTAGAAGTATTGTTTATAAACTTGATTCTCTTTTTTTTATTGATATTCATGAATGTTTTGACTAACGTACTTGCATCTTAATGATTCTCACGAGGAGATCGTTTGATCCTATAACATTTAACTATTAAAAAAATTTGTGGTAAATTAATTTTGAAATCGATAGTCAGGATTCACAATCTTTTAGTTCTTCCCATGCTTTTTGAGTAGTTAGTTTCTCATAAGTGGAATTCATTTTATTTTTGGTAATCTGCTATTGCAGCCCTGTAAGCAGTGGCACTATTCCTGTATCTGGGACTCCAACCACCACCAACCCAGGCAATGGATTCACTCCCACAACCAACACTCCCTTTGGTTCTACGACGCCCACCGGTGTCCTTGGTGGGAACGGGTTTGGCAGTGGCAACAACGGTCTAGGGCCATCGGGCGGGATGAACAACGACTACGCCGACAGCGGGTCGAGGCTCCAACTCACTCTCATTGCCAATGTACTAGCTTTCTCACTCACTCTCATGTTCTTTAGGCATATGGTTTGATGGGGAGTTATTTGTTTAATTTTTGGAGTAGCTGTGGTGGATTTGGTTGGTGAGGGGTCAGATTGGGATTCCTAAATGCAGGGTTGGCTAGCATGTGATGTTCCTGTTCTTGATGTACTGGTTTTGCTCTTAGACAGCTTTGTTTTGTTTGTTTGTTTGTTTGTTCTTTCCTTTTTTTTTGTATTTTTGAAAAGCTTAGTCATCCCCCACTTTGGTACCTAAAAAGGAGAAAAGAAAAAGAGAAATTTGTGCTCCTCATGTCTTTTTGGATGGTTTTTTCATGCCCTAGTGGGACCCACGGAATACTCTTTTTTCTTTTCTCTTTTATGTATTTGCTAACTTTTCCAGATCTAGAATGGCCATTTAAAAAAAAAAAACAAACAACGGCCATGTTCTTGCCCATTCAAGTTTTATTTTGTTTTTTTGATAAAAAAATTTGGTATGGATTATTTGAGATGAGAGCTAAATATTTATAGTTATTGGGAATAATTCAGACGTG GATCTCTGGACTTAAAAATTCTATTAAATATTTTTACTGTGCAATGCTACAAATGGGCTGGCAGGTTTCTGAGTTTCTCAGAGAAGAGAAAATGAAGTTACTGGCGTGTCACGCGCGTACTAGTTAACAATGAGCAGAAAGATCAGTGGCTAGAAAACACAAAAGTGGGCCACTCCTCATTTGATGCCATCGTTTACAATTACCCTCTGAAAAGCCACTGCCTTTATTTTGTATTGAAACATACCCCTCCACTTCAGGGTTTATTACATTTTCACTCCCAAGCACAGTCTCTCCTTCTCTCTTTCTCTCTGTGTGGGTTAGAGCTTTTTTTTCTGGGGCACCATCTCTGAGCTTTGTAATCATGTCTTGTGTGATGCCTGTTTTAGCCATTGGGTTCCTTATTCTGGCCATGACTGGCCACTCAAGTGCAACATGGTGTGTTTGCAAGGATGGATTGGGAGATGCAGCTCTTCAGAAGACACTGGACTATGCTTGTGGAGCTGGAGGTGACTGTGTACCTATTCATCAAAATGGGGGTTGTTTTGCTCCCAACACTGTCAAGGCTCATTGTTCCTATGCTGCTAACAGCTATTTCCAGAGGAAGGGCCAAGCTCCTGGCTCCTGTGATTTTTCTGGCACAGCAATGGTCATTCCTACTGACCCCAGCATGTCAGGTTGTGTTTATCCCTCTAGCGCCAGCCCTGTAAGCAGTGGCACTATTCCTGTATCTGGGACTCCAACCACCACCAACCCAGGCAATGGATTCACTCCCACAACCAACACTCCCTTTGGTTCTACGACGCCCACCGGTGTCCTTGGTGGGAACGGGTTTGGCAGTGGCAACAACGGTCTAGGGCCATCGGGCGGGATGAACAACGACTACGCCGACAGCGGGTCGAGGCTCCAACTCACTCTCATTGCCAATGTACTAGCTTTCTCACTCACTCTCATGTTCTTTAGGCATATGGTTTGATGGGGAGTTATTTGTTTAATTTTTGGAGTAGCTGTGGTGGATTTGGTTGGTGAGGGGTCAGATTGGGATTCCTAAATGCAGGGTTGGCTAGCATGTGATGTTCCTGTTCTTGATGTACTGGTTTTGCTCTTAGACAGCTTTGTTTTGTTTGTTTGTTTGTTTGTTCTTTCCTTTTTTTTTGTATTTTTGAAAAGCTTAGTCATCCCCCACTTTGGTACCTAAAAAGGAGAAAAGAAAAAGAGAAATTTGTGCTCCTCATGTCTTTTTGGATGGTTTTTTCATGCCCTAGTGGGACCCACGGAATACTCTTTTTTCTTTTCTCTTTTATGTATTTGCTAACTTTTCCAGATCTAGAATGGCCATTTAAAAAAAAAAAACAAACAACGGCCATGTTCTTGCCCATTCAAGTTTTATTTTGTTTTTTTGATAAAAAAATTTGGTATGGATTATTTGAGATGAGAGCTAAATATTTATAGTTATTGGGAATAATTCAGACGTG ATGTCTTGTGTGATGCCTGTTTTAGCCATTGGGTTCCTTATTCTGGCCATGACTGGCCACTCAAGTGCAACATGGTGTGTTTGCAAGGATGGATTGGGAGATGCAGCTCTTCAGAAGACACTGGACTATGCTTGTGGAGCTGGAGGTGACTGTGTACCTATTCATCAAAATGGGGGTTGTTTTGCTCCCAACACTGTCAAGGCTCATTGTTCCTATGCTGCTAACAGCTATTTCCAGAGGAAGGGCCAAGCTCCTGGCTCCTGTGATTTTTCTGGCACAGCAATGGTCATTCCTACTGACCCCAGCATGTCAGGTTGTGTTTATCCCTCTAGCGCCAGCCCTGTAAGCAGTGGCACTATTCCTGTATCTGGGACTCCAACCACCACCAACCCAGGCAATGGATTCACTCCCACAACCAACACTCCCTTTGGTTCTACGACGCCCACCGGTGTCCTTGGTGGGAACGGGTTTGGCAGTGGCAACAACGGTCTAGGGCCATCGGGCGGGATGAACAACGACTACGCCGACAGCGGGTCGAGGCTCCAACTCACTCTCATTGCCAATGTACTAGCTTTCTCACTCACTCTCATGTTCTTTAGGCATATGGTTTGA MSCVMPVLAIGFLILAMTGHSSATWCVCKDGLGDAALQKTLDYACGAGGDCVPIHQNGGCFAPNTVKAHCSYAANSYFQRKGQAPGSCDFSGTAMVIPTDPSMSGCVYPSSASPVSSGTIPVSGTPTTTNPGNGFTPTTNTPFGSTTPTGVLGGNGFGSGNNGLGPSGGMNNDYADSGSRLQLTLIANVLAFSLTLMFFRHMV Homology
BLAST of Sed0009906 vs. NCBI nr
Match: XP_022933633.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata] >KAG7021544.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 344.4 bits (882), Expect = 6.9e-91 Identity = 180/208 (86.54%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of Sed0009906 vs. NCBI nr
Match: KAG6587578.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 344.4 bits (882), Expect = 6.9e-91 Identity = 180/208 (86.54%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of Sed0009906 vs. NCBI nr
Match: XP_023004287.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita maxima]) HSP 1 Score: 342.4 bits (877), Expect = 2.6e-90 Identity = 179/208 (86.06%), Postives = 187/208 (89.90%), Query Frame = 0
BLAST of Sed0009906 vs. NCBI nr
Match: XP_023530699.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 341.3 bits (874), Expect = 5.8e-90 Identity = 178/208 (85.58%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of Sed0009906 vs. NCBI nr
Match: XP_038878558.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]) HSP 1 Score: 340.9 bits (873), Expect = 7.6e-90 Identity = 173/204 (84.80%), Postives = 186/204 (91.18%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 6.1e-42 Identity = 102/198 (51.52%), Postives = 124/198 (62.63%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.2e-37 Identity = 94/190 (49.47%), Postives = 117/190 (61.58%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37 Identity = 90/186 (48.39%), Postives = 113/186 (60.75%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.9e-24 Identity = 75/174 (43.10%), Postives = 102/174 (58.62%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21 Identity = 61/146 (41.78%), Postives = 83/146 (56.85%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy TrEMBL
Match: A0A6J1F5D0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111440995 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 3.3e-91 Identity = 180/208 (86.54%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy TrEMBL
Match: A0A6J1KQ09 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita maxima OX=3661 GN=LOC111497655 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90 Identity = 179/208 (86.06%), Postives = 187/208 (89.90%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy TrEMBL
Match: A0A6J1E2D5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430147 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 5.9e-88 Identity = 167/204 (81.86%), Postives = 186/204 (91.18%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy TrEMBL
Match: A0A6J1JDI8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita maxima OX=3661 GN=LOC111485814 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 6.5e-87 Identity = 167/204 (81.86%), Postives = 185/204 (90.69%), Query Frame = 0
BLAST of Sed0009906 vs. ExPASy TrEMBL
Match: A0A5A7US74 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002920 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 3.6e-85 Identity = 169/206 (82.04%), Postives = 178/206 (86.41%), Query Frame = 0
BLAST of Sed0009906 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 172.2 bits (435), Expect = 4.4e-43 Identity = 102/198 (51.52%), Postives = 124/198 (62.63%), Query Frame = 0
BLAST of Sed0009906 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 ) HSP 1 Score: 157.9 bits (398), Expect = 8.5e-39 Identity = 94/190 (49.47%), Postives = 117/190 (61.58%), Query Frame = 0
BLAST of Sed0009906 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 ) HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38 Identity = 90/186 (48.39%), Postives = 113/186 (60.75%), Query Frame = 0
BLAST of Sed0009906 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 145.2 bits (365), Expect = 5.7e-35 Identity = 85/174 (48.85%), Postives = 106/174 (60.92%), Query Frame = 0
BLAST of Sed0009906 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 135.6 bits (340), Expect = 4.5e-32 Identity = 87/193 (45.08%), Postives = 108/193 (55.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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