Sed0009903 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGAAGAGTGATTTCTGTTAGAAATGGCCAGAGATACATCTCGCTCGGAAATCGGCGGCGAGAGCGACGGCGGGCGTGGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGTATGGGATGGAGTTTTCACGGAACAAACAGTTCGATTCATTGAAAGAGATTCCGCCATTAAAGCTCTCAGAAAAAGAAGCAAGAAAACAACAGAAGCTTTCAATTGCTTTCAGTTCTTGAATCTCCTATGCTGCTTCAATTTCTAACTCTCTTCTTCTTCCTCCAATTTTTCCGATCACGAA ATTGAAGAGTGATTTCTGTTAGAAATGGCCAGAGATACATCTCGCTCGGAAATCGGCGGCGAGAGCGACGGCGGGCGTGGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGTATGGGATGGAGTTTTCACGGAACAAACAGTTCGATTCATTGAAAGAGATTCCGCCATTAAAGCTCTCAGAAAAAGAAGCAAGAAAACAACAGAAGCTTTCAATTGCTTTCAGTTCTTGAATCTCCTATGCTGCTTCAATTTCTAACTCTCTTCTTCTTCCTCCAATTTTTCCGATCACGAA ATGGCCAGAGATACATCTCGCTCGGAAATCGGCGGCGAGAGCGACGGCGGGCGTGGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGTATGGGATGGAGTTTTCACGGAACAAACAGTTCGATTCATTGAAAGAGATTCCGCCATTAAAGCTCTCAGAAAAAGAAGCAAGAAAACAACAGAAGCTTTCAATTGCTTTCAGTTCTTGAATCTCCTATGCTGCTTCAATTTCTAA MARDTSRSEIGGESDGGRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF Homology
BLAST of Sed0009903 vs. NCBI nr
Match: KAA0067665.1 (hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669.1 hypothetical protein E5676_scaffold577G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 105.9 bits (263), Expect = 1.6e-19 Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of Sed0009903 vs. NCBI nr
Match: KGN57263.1 (hypothetical protein Csa_009618 [Cucumis sativus]) HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19 Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of Sed0009903 vs. NCBI nr
Match: KAG6576802.1 (hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014829.1 hypothetical protein SDJN02_22458, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16 Identity = 52/90 (57.78%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of Sed0009903 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 67.4 bits (163), Expect = 6.5e-08 Identity = 36/61 (59.02%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Sed0009903 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.4 bits (163), Expect = 6.5e-08 Identity = 36/61 (59.02%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Sed0009903 vs. ExPASy TrEMBL
Match: A0A5D3DK72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00350 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.0e-20 Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of Sed0009903 vs. ExPASy TrEMBL
Match: A0A0A0L658 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19 Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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