Sed0009902 (gene) Chayote v1

Overview


Name	Sed0009902
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	LG05: 34076276 .. 34078068 (-)
RNA-Seq Expression	Sed0009902
Synteny	Sed0009902

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCAACCTTCACAGTAACATGGCCACCTCTGGTATCCAACAATCTGCCTTCGCCGGCCAGACCGCCTTGAAGCCGTCCAATGAGCTCGTCCGAAAGGTCGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGTCGGACTGTCAAGAGTGCTCCTCAAAGCATATGGTAAAGCCCCCTCTTTCTCTATGCTCTCCCACATATCCATCACTTTAGCAGTTCAACTGTGATAAAAAAAATTATTGCCCTGATGTGTTTTGTACATCTTCATGCACATATTGGGCTCAGTTGTTACCTTGTGCAGTAGAGTATAGTGTTTTCCTGCATGTTATTAGATAATATGTAGTTCCGTCTTATAAATAATATGTGAAATCCTGAACATACCTCTTCGAATAGAATCAAAATTTCATTTTTATTAGACTAAACACTTCCTTGGGATTAATGAGCTCTGATATTGTATTAAAAGAGGTTTTATTCGAAAATTAATTGATGATGAAAGGAGTAGTTTAAAAATCTATTGGTCTCTAAGATCCTTAACATGTGTGAGCATGGTGTGTTACAGAAAGATCAGTTCATTCAGCACAATCCATTCAAAGATGTTTATACATTTACTGAATTCAATTTTGGGGAGTAAATTTTCAATCACTATATAGCAATTCTAAGAACACAGATTTTAATGGGGAAGAACAAAAAATAAGAAATTTAAGTTCATTTTCTTTATAATCCATGACTGTTCAAGCCACGGACTCTAGTACATTTGTTTATCAAAATAATTCATTAAAATATATTTTTTAAGTGGATAGTTAACATACATTAAATTCATATAACCTTTAAGCACTTTCCAATTTAAAAGCTCCTTATTTGATTACTAGATCAACATGACGGTTAAGAACTTTGAGTTTCATTTGAATTTCAAATACTTATTCTTGACAAAAACAGGTATGGCCCAGATCGCCCAAAATACTTGGGACCATTCTCAGAACAAACACCATCTTACCTGACTGGAGAGTTTGCTGGTGACTACGGATGGGATACAGCCGGTCTATCAGCAGATCCCGAGACTTTCGCAAAGAACCGTGAGCTCGAGGTGATCCACTCGAGATGGGCCATGCTTGGTGCACTAGGTTGCGTCTTCCCCGAGCTCCTGGCAAAGAACGGTGTCCAGTTTGGTGAATCGGTTTGGTTCAAGGCCGGTTCCCAAATCTTCTCGGAGGGAGGTCTCGATTACCTTGGCAACCCAAACCTCATCCATGCTCAGAGCATCCTAGCAATTTGGGCTTCCCAAGTTGTGCTGATGGGCTTTGTTGAAGGTTACAGAGTTGGTGGTGGTCCCCTTGGTGAAGGACTTGACCCTATTTACCCCGGGGGCGCCTTCGACCCACTCGGATTGGCAGATGACCCTGATGCATTTGCTGAGCTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCGATGTTCTCCATGTTCGGATTCTTCGTCCAGGCTATCGTAACTGGGAAGGGACCTATCGAGAATCTCTTCGACCATGTTGCAGATCCAGTAGCCAACAATGCATGGGCGTACGCCACCAACTTCGTCCCCGGAAAGTGAAGAAACTTATATAGGAAACAACTATCTGTTTTACTATACTCAATCTTCTCACTTTGCTGAAAATCTCATGTTGTAGATTGTGTAATTTCTTTAGTATATGAACTTTTTGCAATTGAATTTGTGTCAGTGAAGTTCAAAGTTCTCTGTATTTTTGTGCTGTTTTCACATACCATTAAAGAAGCTGTAGTAGAATTCATGACCACAG

mRNA sequence

AACCAACCTTCACAGTAACATGGCCACCTCTGGTATCCAACAATCTGCCTTCGCCGGCCAGACCGCCTTGAAGCCGTCCAATGAGCTCGTCCGAAAGGTCGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGTCGGACTGTCAAGAGTGCTCCTCAAAGCATATGGTATGGCCCAGATCGCCCAAAATACTTGGGACCATTCTCAGAACAAACACCATCTTACCTGACTGGAGAGTTTGCTGGTGACTACGGATGGGATACAGCCGGTCTATCAGCAGATCCCGAGACTTTCGCAAAGAACCGTGAGCTCGAGGTGATCCACTCGAGATGGGCCATGCTTGGTGCACTAGGTTGCGTCTTCCCCGAGCTCCTGGCAAAGAACGGTGTCCAGTTTGGTGAATCGGTTTGGTTCAAGGCCGGTTCCCAAATCTTCTCGGAGGGAGGTCTCGATTACCTTGGCAACCCAAACCTCATCCATGCTCAGAGCATCCTAGCAATTTGGGCTTCCCAAGTTGTGCTGATGGGCTTTGTTGAAGGTTACAGAGTTGGTGGTGGTCCCCTTGGTGAAGGACTTGACCCTATTTACCCCGGGGGCGCCTTCGACCCACTCGGATTGGCAGATGACCCTGATGCATTTGCTGAGCTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCGATGTTCTCCATGTTCGGATTCTTCGTCCAGGCTATCGTAACTGGGAAGGGACCTATCGAGAATCTCTTCGACCATGTTGCAGATCCAGTAGCCAACAATGCATGGGCGTACGCCACCAACTTCGTCCCCGGAAAGTGAAGAAACTTATATAGGAAACAACTATCTGTTTTACTATACTCAATCTTCTCACTTTGCTGAAAATCTCATGTTGTAGATTGTGTAATTTCTTTAGTATATGAACTTTTTGCAATTGAATTTGTGTCAGTGAAGTTCAAAGTTCTCTGTATTTTTGTGCTGTTTTCACATACCATTAAAGAAGCTGTAGTAGAATTCATGACCACAG

Coding sequence (CDS)

ATGGCCACCTCTGGTATCCAACAATCTGCCTTCGCCGGCCAGACCGCCTTGAAGCCGTCCAATGAGCTCGTCCGAAAGGTCGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGTCGGACTGTCAAGAGTGCTCCTCAAAGCATATGGTATGGCCCAGATCGCCCAAAATACTTGGGACCATTCTCAGAACAAACACCATCTTACCTGACTGGAGAGTTTGCTGGTGACTACGGATGGGATACAGCCGGTCTATCAGCAGATCCCGAGACTTTCGCAAAGAACCGTGAGCTCGAGGTGATCCACTCGAGATGGGCCATGCTTGGTGCACTAGGTTGCGTCTTCCCCGAGCTCCTGGCAAAGAACGGTGTCCAGTTTGGTGAATCGGTTTGGTTCAAGGCCGGTTCCCAAATCTTCTCGGAGGGAGGTCTCGATTACCTTGGCAACCCAAACCTCATCCATGCTCAGAGCATCCTAGCAATTTGGGCTTCCCAAGTTGTGCTGATGGGCTTTGTTGAAGGTTACAGAGTTGGTGGTGGTCCCCTTGGTGAAGGACTTGACCCTATTTACCCCGGGGGCGCCTTCGACCCACTCGGATTGGCAGATGACCCTGATGCATTTGCTGAGCTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCGATGTTCTCCATGTTCGGATTCTTCGTCCAGGCTATCGTAACTGGGAAGGGACCTATCGAGAATCTCTTCGACCATGTTGCAGATCCAGTAGCCAACAATGCATGGGCGTACGCCACCAACTTCGTCCCCGGAAAGTGA

Protein sequence

MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK

Homology

[Close]

BLAST of Sed0009902 vs. NCBI nr
Match: XP_004144543.1 (chlorophyll a-b binding protein 151, chloroplastic [Cucumis sativus] >KGN43422.1 hypothetical protein Csa_020546 [Cucumis sativus])

HSP 1 Score: 535.4 bits (1378), Expect = 2.8e-148
Identity = 258/265 (97.36%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQTALK SNELVRKVGA+GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. NCBI nr
Match: XP_038887832.1 (chlorophyll a-b binding protein 151, chloroplastic [Benincasa hispida])

HSP 1 Score: 535.0 bits (1377), Expect = 3.6e-148
Identity = 257/265 (96.98%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAF GQ ALK SNELVR+VGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFTGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. NCBI nr
Match: XP_008462084.1 (PREDICTED: chlorophyll a-b binding protein 151, chloroplastic [Cucumis melo] >KAA0059192.1 chlorophyll a-b binding protein 151 [Cucumis melo var. makuwa] >TYK19327.1 chlorophyll a-b binding protein 151 [Cucumis melo var. makuwa])

HSP 1 Score: 534.6 bits (1376), Expect = 4.7e-148
Identity = 258/265 (97.36%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQ ALK SNELVRKVGAVGG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. NCBI nr
Match: XP_022928240.1 (chlorophyll a-b binding protein 151, chloroplastic [Cucurbita moschata] >XP_023529768.1 chlorophyll a-b binding protein 151, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6589102.1 Chlorophyll a-b binding protein 151, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147
Identity = 256/265 (96.60%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQTALK SNELVRKVGA GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. NCBI nr
Match: XP_022135994.1 (chlorophyll a-b binding protein 151, chloroplastic [Momordica charantia])

HSP 1 Score: 532.3 bits (1370), Expect = 2.3e-147
Identity = 255/265 (96.23%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQ ALK SNELVR+VGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLLDHIADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. ExPASy Swiss-Prot
Match: P27518 (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum OX=3635 GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 518.5 bits (1334), Expect = 4.6e-146
Identity = 247/265 (93.21%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQTALK SNELV K+GAVGGGR +MRRTVKSAP SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FS+Q PSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+K
Sbjct: 61  FSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. ExPASy Swiss-Prot
Match: P12062 (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. OX=4104 GN=CAB37 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 1.5e-144
Identity = 244/265 (92.08%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQTALK  NELVRK+G+ GGGR TMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA+QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLD IYPGGAFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NL+DHVADPVANNAWA+ATNFVPGK
Sbjct: 241 NLYDHVADPVANNAWAFATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. ExPASy Swiss-Prot
Match: P27494 (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB36 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 5.6e-144
Identity = 242/265 (91.32%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS I+QSAFAGQTALK  NELVRK+G+  GGR TMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILA+WASQVVLMG +EGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLD IYPGGAFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. ExPASy Swiss-Prot
Match: Q9SHR7 (Chlorophyll a-b binding protein 2.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.1 PE=1 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 9.5e-144
Identity = 239/264 (90.53%), Postives = 254/264 (96.21%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQS+FAGQTALKPSNEL+RKVG  GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSE TPSYLTGE+ GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPG 265
           NLFDH+ADPVANNAW+YATNFVPG
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Sed0009902 vs. ExPASy Swiss-Prot
Match: Q9S7J7 (Chlorophyll a-b binding protein 2.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.2 PE=1 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.2e-143
Identity = 237/265 (89.43%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQS+FAGQTALKPS++L++KVG +GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSE TPSYLTGE+ GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDH+ADPVANNAW+YATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. ExPASy TrEMBL
Match: A0A0A0K565 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_7G033300 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.3e-148
Identity = 258/265 (97.36%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQTALK SNELVRKVGA+GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. ExPASy TrEMBL
Match: A0A5D3D6Y9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00480 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.3e-148
Identity = 258/265 (97.36%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQ ALK SNELVRKVGAVGG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. ExPASy TrEMBL
Match: A0A1S3CG37 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500523 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.3e-148
Identity = 258/265 (97.36%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQ ALK SNELVRKVGAVGG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. ExPASy TrEMBL
Match: A0A6J1ER60 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435134 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.6e-148
Identity = 256/265 (96.60%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQTALK SNELVRKVGA GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. ExPASy TrEMBL
Match: A0A6J1C312 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007803 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.1e-147
Identity = 255/265 (96.23%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQSAFAGQ ALK SNELVR+VGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSEQTPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLLDHIADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 510.8 bits (1314), Expect = 6.8e-145
Identity = 239/264 (90.53%), Postives = 254/264 (96.21%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQS+FAGQTALKPSNEL+RKVG  GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSE TPSYLTGE+ GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPG 265
           NLFDH+ADPVANNAW+YATNFVPG
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Sed0009902 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 510.4 bits (1313), Expect = 8.8e-145
Identity = 237/265 (89.43%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATS IQQS+FAGQTALKPS++L++KVG +GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120
           FSE TPSYLTGE+ GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDH+ADPVANNAW+YATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK 265

[Close]

BLAST of Sed0009902 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 505.4 bits (1300), Expect = 2.8e-143
Identity = 237/266 (89.10%), Postives = 253/266 (95.11%), Query Frame = 0


Query: 1   MATSGIQQSAFAGQTALKPSNELVRKVGAV-GGGRFTMRRTVKSAPQSIWYGPDRPKYLG 60
           MATS IQ S+FAGQT LKPSN+L+RK+GA  GGGR  MRRTVKS PQSIWYGPDRPKYLG
Sbjct: 1   MATSAIQHSSFAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLG 60

Query: 61  PFSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 120
           PFSE TPSYLTGE+ GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+
Sbjct: 61  PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 120

Query: 121 KNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGG 180
           KNGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGG
Sbjct: 121 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGG 180

Query: 181 PLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240
           PLGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI
Sbjct: 181 PLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240

Query: 241 ENLFDHVADPVANNAWAYATNFVPGK 266
           ENLFDH+ADPVANNAWAYATNFVPGK
Sbjct: 241 ENLFDHIADPVANNAWAYATNFVPGK 266

[Close]

BLAST of Sed0009902 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 418.7 bits (1075), Expect = 3.5e-117
Identity = 207/269 (76.95%), Postives = 229/269 (85.13%), Query Frame = 0


Query: 2   ATSGIQQSAFAGQTA-LKPSNELVRKVGAVGGGRFTMRRTV---KSAPQSIWYGPDRPKY 61
           +T  +   AFAG+   L P+   V     +G GR TMR+TV   K    S WYG DR KY
Sbjct: 4   STMALSSPAFAGKAVNLSPAASEV-----LGSGRVTMRKTVAKPKGPSGSPWYGSDRVKY 63

Query: 62  LGPFSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 121
           LGPFS ++PSYLTGEF GDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 64  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 123

Query: 122 LAKNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRV- 181
           LA+NGV+FGE+VWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA+QV+LMG VEGYRV 
Sbjct: 124 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 183

Query: 182 GGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 241
           G GPLGE  D +YPGG+FDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 184 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 243

Query: 242 GPIENLFDHVADPVANNAWAYATNFVPGK 266
           GPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 244 GPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0009902 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 418.7 bits (1075), Expect = 3.5e-117
Identity = 207/269 (76.95%), Postives = 229/269 (85.13%), Query Frame = 0


Query: 2   ATSGIQQSAFAGQTA-LKPSNELVRKVGAVGGGRFTMRRTV---KSAPQSIWYGPDRPKY 61
           +T  +   AFAG+   L P+   V     +G GR TMR+TV   K    S WYG DR KY
Sbjct: 4   STMALSSPAFAGKAVNLSPAASEV-----LGSGRVTMRKTVAKPKGPSGSPWYGSDRVKY 63

Query: 62  LGPFSEQTPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 121
           LGPFS ++PSYLTGEF GDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 64  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 123

Query: 122 LAKNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRV- 181
           LA+NGV+FGE+VWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA+QV+LMG VEGYRV 
Sbjct: 124 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 183

Query: 182 GGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 241
           G GPLGE  D +YPGG+FDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 184 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 243

Query: 242 GPIENLFDHVADPVANNAWAYATNFVPGK 266
           GPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 244 GPIENLADHLADPVNNNAWAFATNFVPGK 267

The following BLAST results are available for this feature:

BLAST of Sed0009902 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144543.1	2.8e-148	97.36	chlorophyll a-b binding protein 151, chloroplastic [Cucumis sativus] >KGN43422.1...	[more]
XP_038887832.1	3.6e-148	96.98	chlorophyll a-b binding protein 151, chloroplastic [Benincasa hispida]	[more]
XP_008462084.1	4.7e-148	97.36	PREDICTED: chlorophyll a-b binding protein 151, chloroplastic [Cucumis melo] >KA...	[more]
XP_022928240.1	1.4e-147	96.60	chlorophyll a-b binding protein 151, chloroplastic [Cucurbita moschata] >XP_0235...	[more]
XP_022135994.1	2.3e-147	96.23	chlorophyll a-b binding protein 151, chloroplastic [Momordica charantia]	[more]

BLAST of Sed0009902 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27518	4.6e-146	93.21	Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum OX=3635...	[more]
P12062	1.5e-144	92.08	Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. OX=4104 GN=CAB3...	[more]
P27494	5.6e-144	91.32	Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
Q9SHR7	9.5e-144	90.53	Chlorophyll a-b binding protein 2.1, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q9S7J7	1.2e-143	89.43	Chlorophyll a-b binding protein 2.2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Sed0009902 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K565	1.3e-148	97.36	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5D3D6Y9	2.3e-148	97.36	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CG37	2.3e-148	97.36	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1ER60	6.6e-148	96.60	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1C312	1.1e-147	96.23	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Sed0009902 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05100.1	6.8e-145	90.53	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	8.8e-145	89.43	photosystem II light harvesting complex gene 2.2	[more]
AT3G27690.1	2.8e-143	89.10	photosystem II light harvesting complex gene 2.3	[more]
AT1G29910.1	3.5e-117	76.95	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	3.5e-117	76.95	chlorophyll A/B-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 66..231 e-value: 4.5E-49 score: 167.1
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 6.1E-89 score: 299.3
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265
None	No IPR available	PANTHER	PTHR21649:SF33	CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED	coord: 1..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009902.1	Sed0009902.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding