Sed0009866 (gene) Chayote v1

Overview


Name	Sed0009866
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	LG02: 42106236 .. 42107269 (+)
RNA-Seq Expression	Sed0009866
Synteny	Sed0009866

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATTTTCTCGACCTCCTCCGCCTTCCTCCGCCGCCGTCGCCGCCGCAACCGCCGCCGTCTGATTTTTCCAATTTCACGGTTTGTATAATATACATAGAATAATGTTTCATGTTCTGTTTTTTTGTTTGTGTTAATTTGCTCAGATATGAATTGGGGTCTTTTCTTTTCTGTTTTCATAATTTAAGGGTCGCATATTTTTCAAATGTTCTGAAAAATTACTCTACAAGATTCATGATTATAAAAAAAAAAAAGGTTGATTTTTATATGAAATGGGGGAATGAGGTTTTTTTTTGTCTTGTAGCAGCATTATTGCATGATTCGAATCTATAACCTCTTCGTCAAATATAAATTGAGTGTTTAGAAAATGGGTAGGTTTCAAAATTTGTTCATCACTTTTAGTTTTTTTATTTTTTGGACAGTCATCACTTTTAGTTGAATAACAATATTTTGATGGAGATTTTGAATTTAAGATATTTTGATTGGTCAATTCTCAACCAACTACATTTATATTCATAATTAGAACCACATAGTTGTTGATATTATATCAATTAGTATTAATTTACAAATTTCTTTTTGTAATAAACAGAGAAGAGACAATGAGCAGGAGAAGCAATGGAAGTGTTCCAAAGCTTGAGTTGAAGCTGAACCTGTCACCACCAAGGGCACATTCACTGCTGTCGTCGCCGAGCCGATCAGCGACAGTGTCGCCCACATCGCCACCGAGCTCTTGCGTGTCATCGGAGCAAAACCAAGACGATGGCACAGCCCTACGATACTCGAGCAGCCCGGAAGCAACCTCAATGGTGCTGGTAGGCTGCCCTAGGTGCCTCATGTACGTGATGCTGTCTGAGAATGACCCCAAATGCCCCAAATGCAAGAGCTCTGTGTTGCTTGATTTCCTCCACGACGGCAGCGCCGCCGCCACTCCGCGGTCCACGACCGCCGCCCGAAAGTTCTAGAAACATCTATTTTCGAAATAGTGTAAACCAGAACTGCTGAGAATCAATTACTATTTGAGTAAATCAACTTAAC

mRNA sequence

CACATTTTCTCGACCTCCTCCGCCTTCCTCCGCCGCCGTCGCCGCCGCAACCGCCGCCGTCTGATTTTTCCAATTTCACGAGAAGAGACAATGAGCAGGAGAAGCAATGGAAGTGTTCCAAAGCTTGAGTTGAAGCTGAACCTGTCACCACCAAGGGCACATTCACTGCTGTCGTCGCCGAGCCGATCAGCGACAGTGTCGCCCACATCGCCACCGAGCTCTTGCGTGTCATCGGAGCAAAACCAAGACGATGGCACAGCCCTACGATACTCGAGCAGCCCGGAAGCAACCTCAATGGTGCTGGTAGGCTGCCCTAGGTGCCTCATGTACGTGATGCTGTCTGAGAATGACCCCAAATGCCCCAAATGCAAGAGCTCTGTGTTGCTTGATTTCCTCCACGACGGCAGCGCCGCCGCCACTCCGCGGTCCACGACCGCCGCCCGAAAGTTCTAGAAACATCTATTTTCGAAATAGTGTAAACCAGAACTGCTGAGAATCAATTACTATTTGAGTAAATCAACTTAAC

Coding sequence (CDS)

ATGAGCAGGAGAAGCAATGGAAGTGTTCCAAAGCTTGAGTTGAAGCTGAACCTGTCACCACCAAGGGCACATTCACTGCTGTCGTCGCCGAGCCGATCAGCGACAGTGTCGCCCACATCGCCACCGAGCTCTTGCGTGTCATCGGAGCAAAACCAAGACGATGGCACAGCCCTACGATACTCGAGCAGCCCGGAAGCAACCTCAATGGTGCTGGTAGGCTGCCCTAGGTGCCTCATGTACGTGATGCTGTCTGAGAATGACCCCAAATGCCCCAAATGCAAGAGCTCTGTGTTGCTTGATTTCCTCCACGACGGCAGCGCCGCCGCCACTCCGCGGTCCACGACCGCCGCCCGAAAGTTCTAG

Protein sequence

MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARKF

Homology

[Close]

BLAST of Sed0009866 vs. NCBI nr
Match: XP_023539011.1 (uncharacterized protein LOC111799770 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.2 bits (539), Expect = 2.4e-51
Identity = 109/119 (91.60%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPPR+HSL+SSPSRSATVSPTSPPSSCVS E NQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDG A A P ST  ARK
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 119

[Close]

BLAST of Sed0009866 vs. NCBI nr
Match: XP_023005134.1 (uncharacterized protein LOC111498264 [Cucurbita maxima])

HSP 1 Score: 211.5 bits (537), Expect = 4.1e-51
Identity = 109/119 (91.60%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPPR HSL+SSPSRSATVSPTSPPSSCVS E NQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDG A A P ST  ARK
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 119

[Close]

BLAST of Sed0009866 vs. NCBI nr
Match: KAG6596596.1 (Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028133.1 hypothetical protein SDJN02_09313, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.5 bits (537), Expect = 4.1e-51
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPPR+HSL+SSPSRSATVSPTSPPSSCVS E NQDDGT LRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTTLRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDG A A+P ST  ARK
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATASPPSTAVARK 119

[Close]

BLAST of Sed0009866 vs. NCBI nr
Match: XP_022958318.1 (uncharacterized protein LOC111459550 [Cucurbita moschata])

HSP 1 Score: 210.7 bits (535), Expect = 7.0e-51
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPP++HSL+SSPSRSATVSPTSPPSSCVS E NQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPQSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDG A A P ST  ARK
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 119

[Close]

BLAST of Sed0009866 vs. NCBI nr
Match: XP_008442891.1 (PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 uncharacterized protein E6C27_scaffold236G001730 [Cucumis melo var. makuwa] >TYK04712.1 uncharacterized protein E5676_scaffold23737G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 3.3e-48
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDD-GTALR 60
           MSRRS+GSVPKLELKLNLSPPR H L+SSPSRSATVSPTSPPSSCVSSE NQDD G ALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG+A+A P STTAARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPP-STTAARK 119

[Close]

BLAST of Sed0009866 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.6e-36
Identity = 83/119 (69.75%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRA--HSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTAL 60
           MSRRS    PKLELKLNLSPP +    ++ SPSRSAT SPTSPPSSCVSSE NQD+  ++
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE-PSV 60

Query: 61  RYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAA 118
           RYS+SPE TSMVLVGCPRCLMYVMLSE+DPKCPKCKS+VLLDFLH+ +  A   +  A+
Sbjct: 61  RYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAAS 114

[Close]

BLAST of Sed0009866 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.4e-25
Identity = 68/119 (57.14%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRY 60
           MSRR N + PKLEL+LNLSPP + +   S  RS   S T+ PSSCVSSE NQ++   +  
Sbjct: 1   MSRR-NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEENETI-- 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
                 TSMVLVGCPRCLMYVMLS++DPKCPKCKS+VLLDFL + + AAT  +    R+
Sbjct: 61  ------TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAANTRR 110

[Close]

BLAST of Sed0009866 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-11
Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 12  LELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRYSSSPEATSMVL 71
           L+LKLN+SP    SLL+  S           SS + SE+ +  G         EA SMV+
Sbjct: 11  LDLKLNISPSLDSSLLTESS-----------SSSLCSEEAEGGG--------GEAKSMVV 70

Query: 72  VGCPRCLMYVMLS-ENDPKCPKCKSSVLLDFL 103
           VGCP C+MY++ S ENDP+CP+C S VLLDFL
Sbjct: 71  VGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of Sed0009866 vs. ExPASy TrEMBL
Match: A0A6J1KYB2 (uncharacterized protein LOC111498264 OS=Cucurbita maxima OX=3661 GN=LOC111498264 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51
Identity = 109/119 (91.60%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPPR HSL+SSPSRSATVSPTSPPSSCVS E NQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDG A A P ST  ARK
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 119

[Close]

BLAST of Sed0009866 vs. ExPASy TrEMBL
Match: A0A6J1H2T2 (uncharacterized protein LOC111459550 OS=Cucurbita moschata OX=3662 GN=LOC111459550 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.4e-51
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPP++HSL+SSPSRSATVSPTSPPSSCVS E NQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPQSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDG A A P ST  ARK
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 119

[Close]

BLAST of Sed0009866 vs. ExPASy TrEMBL
Match: A0A5A7TLW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23737G00010 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDD-GTALR 60
           MSRRS+GSVPKLELKLNLSPPR H L+SSPSRSATVSPTSPPSSCVSSE NQDD G ALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG+A+A P STTAARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPP-STTAARK 119

[Close]

BLAST of Sed0009866 vs. ExPASy TrEMBL
Match: A0A1S3B7J8 (uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDD-GTALR 60
           MSRRS+GSVPKLELKLNLSPPR H L+SSPSRSATVSPTSPPSSCVSSE NQDD G ALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG+A+A P STTAARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPP-STTAARK 119

[Close]

BLAST of Sed0009866 vs. ExPASy TrEMBL
Match: A0A0A0LBI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTA-LR 60
           MSRRS+GSVPKLELKLNLSPPR H L+SSPSRSATVSPTSPPSSCVSSE NQDDG A LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG+A+A P STTAARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPP-STTAARK 119

[Close]

BLAST of Sed0009866 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 151.4 bits (381), Expect = 4.7e-37
Identity = 83/119 (69.75%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRA--HSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTAL 60
           MSRRS    PKLELKLNLSPP +    ++ SPSRSAT SPTSPPSSCVSSE NQD+  ++
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE-PSV 60

Query: 61  RYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAA 118
           RYS+SPE TSMVLVGCPRCLMYVMLSE+DPKCPKCKS+VLLDFLH+ +  A   +  A+
Sbjct: 61  RYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAAS 114

[Close]

BLAST of Sed0009866 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-26
Identity = 68/119 (57.14%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRY 60
           MSRR N + PKLEL+LNLSPP + +   S  RS   S T+ PSSCVSSE NQ++   +  
Sbjct: 1   MSRR-NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEENETI-- 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGSAAATPRSTTAARK 120
                 TSMVLVGCPRCLMYVMLS++DPKCPKCKS+VLLDFL + + AAT  +    R+
Sbjct: 61  ------TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAANTRR 110

[Close]

BLAST of Sed0009866 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 5.2e-12
Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 12  LELKLNLSPPRAHSLLSSPSRSATVSPTSPPSSCVSSEQNQDDGTALRYSSSPEATSMVL 71
           L+LKLN+SP    SLL+  S           SS + SE+ +  G         EA SMV+
Sbjct: 11  LDLKLNISPSLDSSLLTESS-----------SSSLCSEEAEGGG--------GEAKSMVV 70

Query: 72  VGCPRCLMYVMLS-ENDPKCPKCKSSVLLDFL 103
           VGCP C+MY++ S ENDP+CP+C S VLLDFL
Sbjct: 71  VGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of Sed0009866 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 6.6e-07
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 52  QDDGTALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLL 100
           +DDG     +S+  A S V  GCP CL YV +++N+PKCP+C S V L
Sbjct: 198 EDDGVYDGTASATVAASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPL 245

[Close]

BLAST of Sed0009866 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 4.3e-06
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 32  RSATVSPTSPPSSCVSSEQNQDDGTALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCP 91
           RS +   +S  +SC++  +   +  A  +    EA  MV++GC  C+MYVM+ +   +CP
Sbjct: 30  RSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCP 89

Query: 92  KCKSSVLLDF 102
           KCK + L+ F
Sbjct: 90  KCKCTDLIFF 99

The following BLAST results are available for this feature:

BLAST of Sed0009866 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539011.1	2.4e-51	91.60	uncharacterized protein LOC111799770 [Cucurbita pepo subsp. pepo]	[more]
XP_023005134.1	4.1e-51	91.60	uncharacterized protein LOC111498264 [Cucurbita maxima]	[more]
KAG6596596.1	4.1e-51	90.76	Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma ...	[more]
XP_022958318.1	7.0e-51	90.76	uncharacterized protein LOC111459550 [Cucurbita moschata]	[more]
XP_008442891.1	3.3e-48	90.00	PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 unc...	[more]

BLAST of Sed0009866 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	6.6e-36	69.75	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	2.4e-25	57.14	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	7.4e-11	46.74	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Sed0009866 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KYB2	2.0e-51	91.60	uncharacterized protein LOC111498264 OS=Cucurbita maxima OX=3661 GN=LOC111498264...	[more]
A0A6J1H2T2	3.4e-51	90.76	uncharacterized protein LOC111459550 OS=Cucurbita moschata OX=3662 GN=LOC1114595...	[more]
A0A5A7TLW3	1.6e-48	90.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7J8	1.6e-48	90.00	uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=...	[more]
A0A0A0LBI1	2.7e-48	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1	[more]

BLAST of Sed0009866 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	4.7e-37	69.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	1.7e-26	57.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	5.2e-12	46.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16500.1	6.6e-07	47.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	4.3e-06	34.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	PANTHER	PTHR33177:SF40	SUBFAMILY NOT NAMED	coord: 1..110
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009866.1	Sed0009866.1	mRNA