Sed0009864 (gene) Chayote v1

Overview


Name	Sed0009864
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PLATZ transcription factor family protein
Location	LG10: 109045 .. 109852 (+)
RNA-Seq Expression	Sed0009864
Synteny	Sed0009864

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGAGGTGCGTGGATTGAAGGGTTAATCTCAGAGTCTAATTTCTTCGGAGCATGTGGGGACCACCTGCCTCGCAGGAAGAACGAGATGAACCTCTTTTGCTTACACTGTTGTCTCTCCATCTGCCCTCACTGCCTTCCCGCTCATTCCTCCCACCCCCTTCTTCAGGTACGTAATCTTCATTATTATTATATTTTTCTTTATATTCATTTTTATCTCATTCCACACACAGATTCGACGCTACGTTTATCACCATGTGGTTCGCCTCGCCGACCTCGACAACCTCCTTGATTCCTCTTACATTCAGGTCCAACCAACCAACCACTCTCTCTCTCTCTCTCTCTATGGATTTGAATAATAATAATAATAATAATAATATTGCATGCAGCCTTACACCATAAATGGTGCCAAAGTCATATTCTTGAATCACAGGCCCCAGTGTCGGCCTTCCAAGCCCCCTTCCAATGTTTGCTTCACTTGTCACAGAATTCTCCAGCACCCCTTCCATTTCTGCTCCCTCTCATGCAAGGTTGCTCATATGCTCTTTCAAGGGGCACACCTTTCCTCTCTCCTCTTCACCTTCCACCCATCCAATTTTGCTCTCTCTCAATTCCATGCCTCCGACCATCCCCAAATGACTCCCCACTCCATGTCCAATGAGGCACCCAGCAATTCACCAGAACCCCAGATTGTGAACAACAACAACAACAACAAGGAAAACAACACCAATGCTTTCCTCCCTCCAATTACTCTCTCTCTTGGTACCAGGAGAAAGGGTGCTCCCCAAAGGGCTCCCATGTCTTAG

mRNA sequence

ATGAAAGGAGGTGCGTGGATTGAAGGGTTAATCTCAGAGTCTAATTTCTTCGGAGCATGTGGGGACCACCTGCCTCGCAGGAAGAACGAGATGAACCTCTTTTGCTTACACTGTTGTCTCTCCATCTGCCCTCACTGCCTTCCCGCTCATTCCTCCCACCCCCTTCTTCAGATTCGACGCTACGTTTATCACCATGTGGTTCGCCTCGCCGACCTCGACAACCTCCTTGATTCCTCTTACATTCAGCCTTACACCATAAATGGTGCCAAAGTCATATTCTTGAATCACAGGCCCCAGTGTCGGCCTTCCAAGCCCCCTTCCAATGTTTGCTTCACTTGTCACAGAATTCTCCAGCACCCCTTCCATTTCTGGGCACACCTTTCCTCTCTCCTCTTCACCTTCCACCCATCCAATTTTGCTCTCTCTCAATTCCATGCCTCCGACCATCCCCAAATGACTCCCCACTCCATGTCCAATGAGGCACCCAGCAATTCACCAGAACCCCAGATTGTGAACAACAACAACAACAACAAGGAAAACAACACCAATGCTTTCCTCCCTCCAATTACTCTCTCTCTTGGTACCAGGAGAAAGGGTGCTCCCCAAAGGGCTCCCATGTCTTAG

Coding sequence (CDS)

ATGAAAGGAGGTGCGTGGATTGAAGGGTTAATCTCAGAGTCTAATTTCTTCGGAGCATGTGGGGACCACCTGCCTCGCAGGAAGAACGAGATGAACCTCTTTTGCTTACACTGTTGTCTCTCCATCTGCCCTCACTGCCTTCCCGCTCATTCCTCCCACCCCCTTCTTCAGATTCGACGCTACGTTTATCACCATGTGGTTCGCCTCGCCGACCTCGACAACCTCCTTGATTCCTCTTACATTCAGCCTTACACCATAAATGGTGCCAAAGTCATATTCTTGAATCACAGGCCCCAGTGTCGGCCTTCCAAGCCCCCTTCCAATGTTTGCTTCACTTGTCACAGAATTCTCCAGCACCCCTTCCATTTCTGGGCACACCTTTCCTCTCTCCTCTTCACCTTCCACCCATCCAATTTTGCTCTCTCTCAATTCCATGCCTCCGACCATCCCCAAATGACTCCCCACTCCATGTCCAATGAGGCACCCAGCAATTCACCAGAACCCCAGATTGTGAACAACAACAACAACAACAAGGAAAACAACACCAATGCTTTCCTCCCTCCAATTACTCTCTCTCTTGGTACCAGGAGAAAGGGTGCTCCCCAAAGGGCTCCCATGTCTTAG

Protein sequence

MKGGAWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYHHVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHFWAHLSSLLFTFHPSNFALSQFHASDHPQMTPHSMSNEAPSNSPEPQIVNNNNNNKENNTNAFLPPITLSLGTRRKGAPQRAPMS

Homology

[Close]

BLAST of Sed0009864 vs. NCBI nr
Match: KAG6581514.1 (hypothetical protein SDJN03_21516, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.2 bits (679), Expect = 2.4e-67
Identity = 145/239 (60.67%), Postives = 163/239 (68.20%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+EGL+S  NFF  CG H   RKNEMN+FCLHCCLSICPHC+P+H SHPLLQIRRYVYH
Sbjct: 21  AWLEGLMSNCNFFTPCGLHQSGRKNEMNVFCLHCCLSICPHCVPSHRSHPLLQIRRYVYH 80

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHF- 124
           +VVRL DL+ L+  SYIQPYTINGAKVIFLNHRPQ RPSK PSNVC TC RILQHPFHF 
Sbjct: 81  NVVRLGDLEKLIHCSYIQPYTINGAKVIFLNHRPQSRPSKAPSNVCLTCDRILQHPFHFC 140

Query: 125 ------------WAHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA+SQF            D  Q+TP        
Sbjct: 141 SLSCKVDHMVLEGADLSSILFRFDESDFAISQFEGLRMDASELTDDDAQITPNFDSLECQ 200

Query: 185 -HSMSNEAPSN---SPEPQIVNNNNNNKENN--TNAFLPPITLSLGTRRKGAPQRAPMS 208
            +S+SNEA SN   S EP+I       K+ N  TN FLP I LSLG+RRKGAPQRAP+S
Sbjct: 201 AYSISNEATSNSVVSQEPEIATRKKKKKKKNTSTNGFLPGIVLSLGSRRKGAPQRAPLS 259

[Close]

BLAST of Sed0009864 vs. NCBI nr
Match: XP_022925953.1 (uncharacterized protein LOC111433215 [Cucurbita moschata])

HSP 1 Score: 266.2 bits (679), Expect = 2.4e-67
Identity = 145/239 (60.67%), Postives = 163/239 (68.20%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+EGL+S  NFF  CG H   RKNEMN+FCLHCCLSICPHC+P+H SHPLLQIRRYVYH
Sbjct: 24  AWLEGLMSNCNFFTPCGLHQSGRKNEMNVFCLHCCLSICPHCVPSHRSHPLLQIRRYVYH 83

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHF- 124
           +VVRL DL+ L+  SYIQPYTINGAKVIFLNHRPQ RPSK PSNVC TC RILQHPFHF 
Sbjct: 84  NVVRLGDLEKLIHCSYIQPYTINGAKVIFLNHRPQSRPSKAPSNVCLTCDRILQHPFHFC 143

Query: 125 ------------WAHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA+SQF            D  Q+TP        
Sbjct: 144 SLSCKVDHMVLEGADLSSILFRFDESDFAISQFEGLRMDASELTDDDAQITPNFDSLECQ 203

Query: 185 -HSMSNEAPSN---SPEPQIVNNNNNNKENN--TNAFLPPITLSLGTRRKGAPQRAPMS 208
            +S+SNEA SN   S EP+I       K+ N  TN FLP I LSLG+RRKGAPQRAP+S
Sbjct: 204 AYSISNEATSNSVVSQEPEIATRKKKKKKKNTSTNGFLPGIVLSLGSRRKGAPQRAPLS 262

[Close]

BLAST of Sed0009864 vs. NCBI nr
Match: KAG7034805.1 (hypothetical protein SDJN02_04537, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.2 bits (679), Expect = 2.4e-67
Identity = 145/239 (60.67%), Postives = 163/239 (68.20%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+EGL+S  NFF  CG H   RKNEMN+FCLHCCLSICPHC+P+H SHPLLQIRRYVYH
Sbjct: 21  AWLEGLMSNCNFFTPCGLHQSGRKNEMNVFCLHCCLSICPHCVPSHRSHPLLQIRRYVYH 80

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHF- 124
           +VVRL DL+ L+  SYIQPYTINGAKVIFLNHRPQ RPSK PSNVC TC RILQHPFHF 
Sbjct: 81  NVVRLGDLEKLIHCSYIQPYTINGAKVIFLNHRPQSRPSKAPSNVCLTCDRILQHPFHFC 140

Query: 125 ------------WAHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA+SQF            D  Q+TP        
Sbjct: 141 SLSCKVDHMVLEGADLSSILFRFDESDFAISQFEGLRMDASELTDDDAQITPNFDSLECQ 200

Query: 185 -HSMSNEAPSN---SPEPQIVNNNNNNKENN--TNAFLPPITLSLGTRRKGAPQRAPMS 208
            +S+SNEA SN   S EP+I       K+ N  TN FLP I LSLG+RRKGAPQRAP+S
Sbjct: 201 AYSISNEATSNSVVSQEPEIATRKKKKKKKNTSTNGFLPGIVLSLGSRRKGAPQRAPLS 259

[Close]

BLAST of Sed0009864 vs. NCBI nr
Match: XP_023544884.1 (uncharacterized protein LOC111804353 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 9.2e-67
Identity = 145/246 (58.94%), Postives = 163/246 (66.26%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+EGL+S  NFF  CG H   RKNEMN+FCLHCCLSICPHC+P+H SHPLLQIRRYVYH
Sbjct: 21  AWLEGLMSNCNFFAPCGLHQSGRKNEMNVFCLHCCLSICPHCVPSHRSHPLLQIRRYVYH 80

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHF- 124
           +VVRL DL+ L+  SYIQPYTINGAKVIFLNHRPQ RPSK PSNVC TC RILQHPFHF 
Sbjct: 81  NVVRLGDLEKLIHCSYIQPYTINGAKVIFLNHRPQSRPSKAPSNVCLTCDRILQHPFHFC 140

Query: 125 ------------WAHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA+SQF            D  Q+TP        
Sbjct: 141 SLSCKVDHMVLEGADLSSILFRFDESDFAISQFEGLRMDASELTDDDAQITPNFDSLECQ 200

Query: 185 -HSMSNEAPSN---SPEPQIVNNNNNNKEN---------NTNAFLPPITLSLGTRRKGAP 208
            +S+SNEA SN   S EP+I       K+N          TN FLP I LSLG+RRKGAP
Sbjct: 201 AYSISNEATSNSVVSQEPEIATRKKKKKKNTTTTTTTTTTTNGFLPGIVLSLGSRRKGAP 260

[Close]

BLAST of Sed0009864 vs. NCBI nr
Match: XP_022977796.1 (uncharacterized protein LOC111477990 [Cucurbita maxima])

HSP 1 Score: 261.5 bits (667), Expect = 6.0e-66
Identity = 144/244 (59.02%), Postives = 162/244 (66.39%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+EGL+S  NFF  CG H   RKNEMN+FCLHCCLSICPHC+P+H SHPLLQIRRYVYH
Sbjct: 29  AWLEGLMSNCNFFTPCGLHQSGRKNEMNVFCLHCCLSICPHCVPSHRSHPLLQIRRYVYH 88

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHF- 124
           +VVRL DL+ L+  SYIQPYTINGAKVIFLNHRPQ RPSK PSNVC TC RILQHPFHF 
Sbjct: 89  NVVRLGDLEKLIHCSYIQPYTINGAKVIFLNHRPQSRPSKAPSNVCLTCDRILQHPFHFC 148

Query: 125 ------------WAHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA+SQF            D  Q+TP        
Sbjct: 149 SLSCKVDHMVLEGADLSSILFRFDESDFAISQFEGLRMDASELTDDDAQITPNFDSLECQ 208

Query: 185 -HSMSNEAPSN---SPEPQIVNNNNNNKE-------NNTNAFLPPITLSLGTRRKGAPQR 208
            +S+SNEA SN   S EP+I       K+         TN FLP I LSLG+RRKGAPQR
Sbjct: 209 AYSISNEATSNSVVSREPEIATTKKKKKKTTTTTTTTTTNGFLPGIVLSLGSRRKGAPQR 268

[Close]

BLAST of Sed0009864 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.7e-32
Identity = 63/117 (53.85%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW++ L +E  FF  C  H   +KNE N+ CL CC S+CPHC+P+H  H LLQ+RRYVYH
Sbjct: 7   AWLDALYAE-KFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 66

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPF 122
            VVRL DL  L+D S +Q YTIN AKV+F+  RPQ R  K   N C +C R LQ P+
Sbjct: 67  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPY 122

[Close]

BLAST of Sed0009864 vs. ExPASy TrEMBL
Match: A0A6J1EGP4 (uncharacterized protein LOC111433215 OS=Cucurbita moschata OX=3662 GN=LOC111433215 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.2e-67
Identity = 145/239 (60.67%), Postives = 163/239 (68.20%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+EGL+S  NFF  CG H   RKNEMN+FCLHCCLSICPHC+P+H SHPLLQIRRYVYH
Sbjct: 24  AWLEGLMSNCNFFTPCGLHQSGRKNEMNVFCLHCCLSICPHCVPSHRSHPLLQIRRYVYH 83

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHF- 124
           +VVRL DL+ L+  SYIQPYTINGAKVIFLNHRPQ RPSK PSNVC TC RILQHPFHF 
Sbjct: 84  NVVRLGDLEKLIHCSYIQPYTINGAKVIFLNHRPQSRPSKAPSNVCLTCDRILQHPFHFC 143

Query: 125 ------------WAHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA+SQF            D  Q+TP        
Sbjct: 144 SLSCKVDHMVLEGADLSSILFRFDESDFAISQFEGLRMDASELTDDDAQITPNFDSLECQ 203

Query: 185 -HSMSNEAPSN---SPEPQIVNNNNNNKENN--TNAFLPPITLSLGTRRKGAPQRAPMS 208
            +S+SNEA SN   S EP+I       K+ N  TN FLP I LSLG+RRKGAPQRAP+S
Sbjct: 204 AYSISNEATSNSVVSQEPEIATRKKKKKKKNTSTNGFLPGIVLSLGSRRKGAPQRAPLS 262

[Close]

BLAST of Sed0009864 vs. ExPASy TrEMBL
Match: A0A6J1IKY9 (uncharacterized protein LOC111477990 OS=Cucurbita maxima OX=3661 GN=LOC111477990 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.9e-66
Identity = 144/244 (59.02%), Postives = 162/244 (66.39%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+EGL+S  NFF  CG H   RKNEMN+FCLHCCLSICPHC+P+H SHPLLQIRRYVYH
Sbjct: 29  AWLEGLMSNCNFFTPCGLHQSGRKNEMNVFCLHCCLSICPHCVPSHRSHPLLQIRRYVYH 88

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHF- 124
           +VVRL DL+ L+  SYIQPYTINGAKVIFLNHRPQ RPSK PSNVC TC RILQHPFHF 
Sbjct: 89  NVVRLGDLEKLIHCSYIQPYTINGAKVIFLNHRPQSRPSKAPSNVCLTCDRILQHPFHFC 148

Query: 125 ------------WAHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA+SQF            D  Q+TP        
Sbjct: 149 SLSCKVDHMVLEGADLSSILFRFDESDFAISQFEGLRMDASELTDDDAQITPNFDSLECQ 208

Query: 185 -HSMSNEAPSN---SPEPQIVNNNNNNKE-------NNTNAFLPPITLSLGTRRKGAPQR 208
            +S+SNEA SN   S EP+I       K+         TN FLP I LSLG+RRKGAPQR
Sbjct: 209 AYSISNEATSNSVVSREPEIATTKKKKKKTTTTTTTTTTNGFLPGIVLSLGSRRKGAPQR 268

[Close]

BLAST of Sed0009864 vs. ExPASy TrEMBL
Match: A0A0A0KL25 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G526480 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.2e-65
Identity = 142/239 (59.41%), Postives = 159/239 (66.53%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+  L+S SNFF  CG H  RRKNEMN+FCLHCCLSICPHCLP+H SHPLLQIRRYVYH
Sbjct: 49  AWLRALMSNSNFFTPCGLHHSRRKNEMNVFCLHCCLSICPHCLPSHRSHPLLQIRRYVYH 108

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHFW 124
            VVRL DL+ L+D SYIQPYTINGAKVIFLNHRPQ RP K PSNVC TC RILQ PFHF 
Sbjct: 109 DVVRLGDLEKLIDCSYIQPYTINGAKVIFLNHRPQSRPCKAPSNVCLTCDRILQEPFHFC 168

Query: 125 -------------AHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA SQF            D  Q+TP        
Sbjct: 169 SLSCKVDHMVLEEADLSSILFRFDESDFAFSQFEGLRMDGSEVTDDDAQITPNFDSLQCQ 228

Query: 185 ---HSMSNEAPSN---SPEPQIVNNNNNNKENNTNAFLPPITLSLGTRRKGAPQRAPMS 208
              +S+SNEA SN   S E +IV      K+  +N FLP I LSLG+RRKGAPQR+P+S
Sbjct: 229 GLSYSISNEATSNSVVSREQEIV-----KKKKKSNGFLPGIVLSLGSRRKGAPQRSPLS 282

[Close]

BLAST of Sed0009864 vs. ExPASy TrEMBL
Match: A0A1S3AZH6 (uncharacterized protein LOC103484265 OS=Cucumis melo OX=3656 GN=LOC103484265 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.2e-65
Identity = 142/239 (59.41%), Postives = 159/239 (66.53%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+  L+S SNFF  CG H  RRKNEMN+FCLHCCLSICPHCLP+H SHPLLQIRRYVYH
Sbjct: 49  AWLRALMSNSNFFTPCGLHHSRRKNEMNVFCLHCCLSICPHCLPSHRSHPLLQIRRYVYH 108

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHFW 124
            VVRL DL+ L+D SYIQPYTINGAKVIFLNHRPQ RP K PSNVC TC RILQ PFHF 
Sbjct: 109 DVVRLGDLEKLIDCSYIQPYTINGAKVIFLNHRPQSRPCKAPSNVCLTCDRILQEPFHFC 168

Query: 125 -------------AHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA SQF            D  Q+TP        
Sbjct: 169 SLSCKVDHMVLEEADLSSILFRFDESDFAFSQFEGLRMDGSEVTDDDAQITPNFDSLQCQ 228

Query: 185 ---HSMSNEAPSN---SPEPQIVNNNNNNKENNTNAFLPPITLSLGTRRKGAPQRAPMS 208
              +S+SNEA SN   S E +IV      K+  +N FLP I LSLG+RRKGAPQR+P+S
Sbjct: 229 GLSYSISNEATSNSVVSREQEIV-----KKKKKSNGFLPGIVLSLGSRRKGAPQRSPLS 282

[Close]

BLAST of Sed0009864 vs. ExPASy TrEMBL
Match: A0A6J1D082 (uncharacterized protein LOC111015821 OS=Momordica charantia OX=3673 GN=LOC111015821 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.6e-61
Identity = 140/239 (58.58%), Postives = 155/239 (64.85%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+EGLIS + FFG C  H  RRKN+ N+FCL CCLSICPHCLP+H SHPLLQIRRYVYH
Sbjct: 36  AWLEGLISHT-FFGPCLVHDSRRKNDKNVFCLSCCLSICPHCLPSHRSHPLLQIRRYVYH 95

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHF- 124
            VVRL DL+ L+D SYIQPYTINGAKVIFLNHRPQ RP K PSNVC TC RILQ PFHF 
Sbjct: 96  DVVRLGDLEKLIDCSYIQPYTINGAKVIFLNHRPQSRPCKAPSNVCLTCDRILQDPFHFC 155

Query: 125 ------------WAHLSSLLFTFHPSNFALSQFH---------ASDHPQMTP-------- 184
                        A LSS+LF F  S+FA SQF            D  Q+ P        
Sbjct: 156 SLSCKVDHMVFEGADLSSILFRFDESDFAFSQFEGLRMDGSEVTDDDAQIAPNFDSLQCK 215

Query: 185 ---HSMSNEAPSN---SPEPQIVNNNNNNKENNTNAFLPPITLSLGTRRKGAPQRAPMS 208
              +S SNEA SN   S EP+I       K+  +N FLP I LSLG RRKGAPQRAP+S
Sbjct: 216 GLSYSTSNEATSNSVLSREPEIA----MKKKKKSNGFLPGIVLSLGNRRKGAPQRAPLS 269

[Close]

BLAST of Sed0009864 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 201.8 bits (512), Expect = 5.2e-52
Identity = 115/226 (50.88%), Postives = 144/226 (63.72%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+EGL++E+ FF +CG H  RRK+E N+FCL CCLS+CPHCLP+H SHPLLQ+RRYVYH
Sbjct: 20  AWLEGLMAET-FFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVYH 79

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHFW 124
            VVRL+DL+ L+D SY+QPYTINGAKVIFLN R Q R +K  SNVCFTC RILQ PFHF 
Sbjct: 80  DVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR-AKVSSNVCFTCDRILQEPFHFC 139

Query: 125 A-------------HLSSLLFTFHPSNFALSQFHASDHPQMTPHSMSNEAPS---NSPEP 184
           +              LSS+L+    S+F         H Q+   S   +       S E 
Sbjct: 140 SLSCKVDYLSYQGDDLSSILYRIDESDFTFEGLRMDGHDQLGEISTMEDGEDILVISDES 199

Query: 185 QIVNNNN------NNKENNTNAFLPPITL-SLGTRRKGAPQRAPMS 208
           +  NN++      + K+   + +LP + L SLG RRKGAP RAP S
Sbjct: 200 EQGNNSHKKEKKKSKKKKPESNYLPGMVLSSLGNRRKGAPHRAPFS 243

[Close]

BLAST of Sed0009864 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.5e-33
Identity = 63/117 (53.85%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW++ L +E  FF  C  H   +KNE N+ CL CC S+CPHC+P+H  H LLQ+RRYVYH
Sbjct: 7   AWLDALYAE-KFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 66

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPF 122
            VVRL DL  L+D S +Q YTIN AKV+F+  RPQ R  K   N C +C R LQ P+
Sbjct: 67  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPY 122

[Close]

BLAST of Sed0009864 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32
Identity = 76/177 (42.94%), Postives = 102/177 (57.63%), Query Frame = 0


Query: 5   AWIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHCLPAHSSHPLLQIRRYVYH 64
           AW+E L+ +  FF AC DH   +KNE N+ C+ CCL+ICPHCL +H+SH LLQIRRYVY 
Sbjct: 8   AWLEVLLKD-KFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 67

Query: 65  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHFW 124
            V+R+ D   L+D S IQPYT N +KV+F+N RPQ R  +   N+C TC R LQ P+ F 
Sbjct: 68  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGSGNICITCDRSLQSPYLFC 127

Query: 125 AHLSSLLFTFHPSNFALSQFHASDHPQMTPHSMSNEAPSNSPEPQIVNNNNNNKENN 182
             LS  +         LS F    +       ++   PS++ EP   N  ++    N
Sbjct: 128 C-LSCKISDVIMRQRGLSGFLRVCNVLDLTDEVTTTTPSSTLEPTGSNRTSSESSGN 182

[Close]

BLAST of Sed0009864 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein )

HSP 1 Score: 108.2 bits (269), Expect = 7.9e-24
Identity = 57/125 (45.60%), Postives = 73/125 (58.40%), Query Frame = 0


Query: 6   WIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLSICPHC----LPAHSSHPLLQIRRY 65
           WIE L++ S FFG C +H   RKNE N+FC+ C + IC HC      +H  H  LQI +Y
Sbjct: 13  WIETLLN-SEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHRRLQICKY 72

Query: 66  VYHHVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNV-----CFTCHRI 121
           VY  V+RL ++ N  D S IQ Y ING K I LN RPQ + ++P +       C TC R 
Sbjct: 73  VYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCVTCKRY 132

[Close]

BLAST of Sed0009864 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 101.7 bits (252), Expect = 7.4e-22
Identity = 66/204 (32.35%), Postives = 97/204 (47.55%), Query Frame = 0


Query: 6   WIEGLISESNFFGACGDHLPRRKNEMNLFCLHCCLS-ICPHCLPAHSSHPLLQIRRYVYH 65
           W++ L+ E  FF  C  H    K+E N++CL C    +C  CL  H  H  +QIRR  YH
Sbjct: 14  WLKPLLRE-KFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYH 73

Query: 66  HVVRLADLDNLLDSSYIQPYTINGAKVIFLNHRPQCRPSKPPSNVCFTCHRILQHPFHFW 125
            V+R++++   LD + +Q Y IN AKV+FLN RPQ RP K   N C  C+R L   F F 
Sbjct: 74  DVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRSLVDSFRFC 133

Query: 126 AHLSSLLFTFHPSNFALSQFHASDHPQMTPHSMSNEAPSNSPEPQIVNNNNNNKENNTNA 185
           +               +S        + T +   ++   +S     +  N++   N+   
Sbjct: 134 S-----------LGCKISGISKKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTP 193

Query: 186 FLPPITL---SLGTRRKGAPQRAP 206
             PP++     +  RRKG P RAP
Sbjct: 194 STPPLSAVNRRIAKRRKGIPHRAP 205

The following BLAST results are available for this feature:

BLAST of Sed0009864 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581514.1	2.4e-67	60.67	hypothetical protein SDJN03_21516, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022925953.1	2.4e-67	60.67	uncharacterized protein LOC111433215 [Cucurbita moschata]	[more]
KAG7034805.1	2.4e-67	60.67	hypothetical protein SDJN02_04537, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023544884.1	9.2e-67	58.94	uncharacterized protein LOC111804353 [Cucurbita pepo subsp. pepo]	[more]
XP_022977796.1	6.0e-66	59.02	uncharacterized protein LOC111477990 [Cucurbita maxima]	[more]

BLAST of Sed0009864 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	7.7e-32	53.85	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Sed0009864 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGP4	1.2e-67	60.67	uncharacterized protein LOC111433215 OS=Cucurbita moschata OX=3662 GN=LOC1114332...	[more]
A0A6J1IKY9	2.9e-66	59.02	uncharacterized protein LOC111477990 OS=Cucurbita maxima OX=3661 GN=LOC111477990...	[more]
A0A0A0KL25	4.2e-65	59.41	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G526480 ...	[more]
A0A1S3AZH6	4.2e-65	59.41	uncharacterized protein LOC103484265 OS=Cucumis melo OX=3656 GN=LOC103484265 PE=...	[more]
A0A6J1D082	1.6e-61	58.58	uncharacterized protein LOC111015821 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of Sed0009864 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31040.1	5.2e-52	50.88	PLATZ transcription factor family protein	[more]
AT2G12646.1	5.5e-33	53.85	PLATZ transcription factor family protein	[more]
AT3G60670.1	1.2e-32	42.94	PLATZ transcription factor family protein	[more]
AT2G01818.1	7.9e-24	45.60	PLATZ transcription factor family protein	[more]
AT1G32700.1	7.4e-22	32.35	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 59..123 e-value: 3.5E-19 score: 69.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..207
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 5..207
None	No IPR available	PANTHER	PTHR31065:SF45	SUBFAMILY NOT NAMED	coord: 5..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009864.1	Sed0009864.1	mRNA