Sed0009816 (gene) Chayote v1

Overview


Name	Sed0009816
Type	gene
Organism	Sechium edule (Chayote v1)
Description	charged multivesicular body protein 5
Location	LG07: 37177239 .. 37182034 (+)
RNA-Seq Expression	Sed0009816
Synteny	Sed0009816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGATTGGCGTTGAGTTGTGACGAAGATAGAATCGGATGCACAGGAATATTCTCGTTGGGTCGTCTCTTTTCTTCTGAACGATCGAAGAAAAAACATGGCGGAGAGATTCTCATCGCTATAATTCCAAAGTGGATCCAAAATCTCCGTTCAGAACCGAAAGATGAAGAGAGTTTTCGGCGTCAAGAAAGACAAGCAACCGCCTCCCTCCATTAACGACGCCTCCGAAAGGGTAAAATTGTTACGATTTTGGGTTCTAGGGTTTTCATTTGATTCATTTGAATTGATGGGTTGTTTTTCAGATTGGCAAAAGGGGCGAATCAGTGGATGAAAAGATAGCGAAGCTCGATGCTGAACTCAGTAGATATAAGGAGCAGATCAAGAAGACGAGGCCCGGTCCTGCTCAGGAAGCTGTTAAAGCCAGAGCCATGAGGGTTTTGAAGCAAAAACGAATGTATGCGTTTCATATTATCATTCTTTATTTCAAATGTATATTTGGTTTTAGGGTATTTGGATTTTGAGATATATATATATATATATGGCAGAGGCTTGTAAGCAAGGGTGTTCTTGTCTTCACTTTAAGAATCTAAGCTTCTGTTTTTCCCTCTGGTCTTGTTGCTAGGATCTCACCCTCCTTGTTTTTCCTCTCCCACCTGTTTGGACTTAAATTTTGGTCTAACATGAGAGGAGTTAAATAACCCTTTTCATAATCATTAAGCCTTTAAATACAATTTTATATATAAAAATTTGTTTTTTTTTTTTTTGAAATTTGGCTAGTTTTCAAATACAGAAACTATTGTAGAGAAATTGGGAAAGAAAAAATTTAGACCCGGTTGATAACCATTTGGTTTTTTGTTTACGAAATTTAAGTCTATTTCTACTCAAATTTTTTACCATGTGCTTCATCTTTCCTACAATATATCCATATTTCCTTAAAATAGTAAGTGAATACTAACCAAATTTCAAAAAAAAAAAACAAGCTTTTGGAAGCTACTTTTTTTTGTTTTCAAATTTTGTTTTGATTATTAAAATATAGGTAAGATTTAGATATCCAAATAAAAAAAAAGCTATGGTAAGGTAGTTGTTGTAAGCTTAAATTTCAAAAACAAAAAAAGAAAAACAAAATGGTTATCAAACGGGGCCTTAATTTTCAAAACTGAAATGCTATCATATGGGCCTAAGTTATTAGATTCCCATAAAATCCTGTCTTGTTTTTCATGCTTTCCTTTTTTATTTCAAACTCTTTCTTGCTGTAACAGCTGACTGTTACCCCCTTATACTTTATTGACCACAATTTAATTAGTCTTATGTTAGAAAGCTTGTAAATTTGAATGTTGGCCCTCAAACTGATTAGAAGACGGGAAACTGGTCTTACTACAGATGAATTGGGATTTTTTTTTAATCAGTTAGTGTCTGTCTGCTGTCTGCGCCAGCTTACGCCACACCCTAATTAATAGGGGTGTACATGGTCCGGGTTGGGTAGGGTTGAATGATTTTTTTGGACCAACCCAAATTTTCGGGTTGGAAAATTCGCCAACCCATCCGACCTTATGCATAAACTCAACCCAACCCAACCTAACCCTAGATTTTTGGGTTGGGTTGGGTTGGGTTCTCGGGTTATGTTACTCTCCTTTTTTTTCTCTCAAAAATTCAACTCATAAGCTCACAAATAGGTTAAAAAATGTTGATACTATACTACAACCCATTACCTATCTAATTAATGCAATTCTTTATTTTTAGAAGACTTACAAGTATTCTAAAAAATTATCTTATTATTATATCTTGCATGCACACACATAAAATGCATATAATATTATTTGTTCGGGTTGGGTTGGGTTGAACGAGTCAAATCCAAGAATCAACCCAACCCAACAAAAACTATAAAATCATAACCCAACCCAACCCAAAAAAATTTTAACCCAACCCAACCCTTACGGTTTGGGTTGGGTAGTCCGGGTTGCTCGGGTTACTGGTTTTTTTGTACACCCCTACTAATTAATGTCATCAGCTAGGTAGGTGGCCACCGTCGATTGAACTCATCCATCACCTCTAAGCTTTTCAATACACTTTTGACCACTAGCTCATGATGGTTTTGTTCTAAGCTTATTGTTTCTACTGTGCCGATACTTTCTCATATTTAGCCAATAAGAAAAATTACTAAGTGGCATAAGTCTGCTCATGAATAAGAAGTCACGGGTTCAAATCTCTACTTCTTTTGTTGTTGAACTCAAAAAAATACTTTCTCATATTTACCATTGGTATGGTTTTTAAGGTATTTATTATTCTTCCGACCAGGTACGAAGGACAACGTGACATGCTGTACAATCAGACATTTAACCTAGATCAAGTTGCATTTGCCTCGGAGGGCATTAAAGATGCTCAACAAACGGTAACATCTGTTCAACCTTTATGCAATCATCAGTTTGCTCATTTTCTGCCTCCTAAAACTGAGGGAAAAAAGTTAGGGCCTTCCATGAAAGATTAGGGCTTAAAGATATTATGTTATATCAAGGAAGTGTTAGGATATTGGAAGGGGAATTTATCGGCTTACTTGCATATTTAATTGTTTGACCATGGAACCTGGGTTGAGGCGATTCCTATTAATGCACCTGTTAATTCTGGCCAAATTTTTTGTTTTATTGGTAGCGAGGACAGAGTTCAGGGCTGTTCAGGTGGAGCTATATCTGTCTAGTTGGAACCTGCTGCCTACCTCGTGAGAGAACGAGGTAGGGAACAAACATCCATCATTAGGAACAAATTTCTCGAAGTTCAATAAAATGTCTCTAGATTTTTCTTATGGTTCTTACTAGTTACTAGTATCGGTTTCGCTTTTGATAGGAATTGATATCCTGGATGCATTTATTTGATCAAATAACAGTGCAACCTTTTCTCTCAAACTAACGTTTTTTTTTTCAGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAAGATACAGGATATTGACGTCAGTGGCTAGAAACTCGGTTTCACATCCTTAAGGTTTTACTCTGGCATTTTTTTATAGGTTTTGTGTTGTTTTCTGCAGAACTTACAAGATGAAATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACCCTTGGTAGGAGCTATAATGTACCTGATGACATTGACGAAGATGAACTTTTGGGAGGTAAAATTACAATTTAAATGCTCAATTTTTATGAATTAATATTTCACCTTTGGAAGCTTTACACTTTTACTCCTTTTTTTGAATGTAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTGATTTAGAAGGAGAGCTTAACTTGCCTCCAGCTCCTTCAGGGCATGCACCAGTTCCTGCTGGCAGAATCAATACACAGGTAATGATTGTTGAAACTTCATAGGTAATTGTAAATTGTGTGTCTAGGTCAACTTACGCGCACCTCAACTATTCTTTCATGACAAACCGTATGAGTATTTGGTTGTCAAAGAAACTTGTAAAAATTACTTTTTAGGTAGGTGACTATAATGAATAAAACTCGTACTTTTTGGTTTCCCAAGATCTTCTTGATCACTAATCCAACTCACAATGGCTTTAGAGACAGAGTGAATCAAACCACCTATTGGGGTCAATATTCAAATGAAATATTGCTTAGATTTTCAGGACACGCATTTTTCTTTCTTTCTTGAGAAAATCAGGTGTGGGTTTACCATGAATTCCATCCATTATCATGAAAAACAAGTTGTGTCTGTTCAAGAAATGATCGTAATATCTTCTCTTTTACTTATTGGCTGGCTGCTCTAAATTTCATTTCTTTTATGTCACCATTTGTTTTACCTACTGCACTTTTTTTTTTTATGCATCATATATATATATATATATATATATATATACTTGGGATAAAAATCGACCTTTCATTGAGATAAAAAGCAAACAAAAGAAGCCTAAAAAAAGGAGATGAAGATGAAGCCTATAAAAATGGCTTACAATCCAACAAAATCTAACCCAACTAATAATTACCAAACAAATTCATCCACCAAGGCCTAGATAGAAATATTGAGGGTCATCCTTTTAAGAAGGAGAAGAAATTTTTGTGGAATCATATTTTATCAGAGCTTTTTGTTGGAATATATGGCTGGAGAGAAACAAAAGGATCTTTAAGGACAAATGCTCTTCTTACGAGAATTTTTTGGACACCATTACTTTTCACGTTATATCTTGGTGTAAACTAAATCCGCTATTTTGTTTTTATAGTTTTGAAACACTACTTAATTACTGGCGTTTGTTTGATATTCTGTAATCTATATCTCTATATTGTAATTTCATAATTTATTGAAATTGTCTCTTCTCTCTCTCTCTATATATATATGGGAAACCTCTAGCTTTTTATGGATCATTGACTTTTGTTCTAATGTTTTTGGTGCACAGGATGAATTTGGTTTACCAGCGGTTCCTCATGCATCCCTTCGAAGCTAAAAGTTACATTTTTTCTCAAACTGACCATATTTTCTTGGAGCTGATGGAGTGAACCTATGTATACACGTTGTGCAGATTTTATATTTGATTCATATAATTAGCATATTATTATTATTAATTATTGGTAGTCCTGAAATCTTTTGATATGCAGAATAATCTATTTGTATATAGGCACATTCTTGATGTCATTCTTTTCTGTCTATTTTGTTTTTATGCCATATCTGTACTCTGTTGACACATACTTGGTATCTTTCTTTTTTCACATTCTTG

mRNA sequence

TAGGATTGGCGTTGAGTTGTGACGAAGATAGAATCGGATGCACAGGAATATTCTCGTTGGGTCGTCTCTTTTCTTCTGAACGATCGAAGAAAAAACATGGCGGAGAGATTCTCATCGCTATAATTCCAAAGTGGATCCAAAATCTCCGTTCAGAACCGAAAGATGAAGAGAGTTTTCGGCGTCAAGAAAGACAAGCAACCGCCTCCCTCCATTAACGACGCCTCCGAAAGGATTGGCAAAAGGGGCGAATCAGTGGATGAAAAGATAGCGAAGCTCGATGCTGAACTCAGTAGATATAAGGAGCAGATCAAGAAGACGAGGCCCGGTCCTGCTCAGGAAGCTGTTAAAGCCAGAGCCATGAGGGTTTTGAAGCAAAAACGAATGTACGAAGGACAACGTGACATGCTGTACAATCAGACATTTAACCTAGATCAAGTTGCATTTGCCTCGGAGGGCATTAAAGATGCTCAACAAACGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAAGATACAGGATATTGACAACTTACAAGATGAAATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACCCTTGGTAGGAGCTATAATGTACCTGATGACATTGACGAAGATGAACTTTTGGGAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTGATTTAGAAGGAGAGCTTAACTTGCCTCCAGCTCCTTCAGGGCATGCACCAGTTCCTGCTGGCAGAATCAATACACAGGATGAATTTGGTTTACCAGCGGTTCCTCATGCATCCCTTCGAAGCTAAAAGTTACATTTTTTCTCAAACTGACCATATTTTCTTGGAGCTGATGGAGTGAACCTATGTATACACGTTGTGCAGATTTTATATTTGATTCATATAATTAGCATATTATTATTATTAATTATTGGTAGTCCTGAAATCTTTTGATATGCAGAATAATCTATTTGTATATAGGCACATTCTTGATGTCATTCTTTTCTGTCTATTTTGTTTTTATGCCATATCTGTACTCTGTTGACACATACTTGGTATCTTTCTTTTTTCACATTCTTG

Coding sequence (CDS)

ATGAAGAGAGTTTTCGGCGTCAAGAAAGACAAGCAACCGCCTCCCTCCATTAACGACGCCTCCGAAAGGATTGGCAAAAGGGGCGAATCAGTGGATGAAAAGATAGCGAAGCTCGATGCTGAACTCAGTAGATATAAGGAGCAGATCAAGAAGACGAGGCCCGGTCCTGCTCAGGAAGCTGTTAAAGCCAGAGCCATGAGGGTTTTGAAGCAAAAACGAATGTACGAAGGACAACGTGACATGCTGTACAATCAGACATTTAACCTAGATCAAGTTGCATTTGCCTCGGAGGGCATTAAAGATGCTCAACAAACGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAAGATACAGGATATTGACAACTTACAAGATGAAATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACCCTTGGTAGGAGCTATAATGTACCTGATGACATTGACGAAGATGAACTTTTGGGAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTGATTTAGAAGGAGAGCTTAACTTGCCTCCAGCTCCTTCAGGGCATGCACCAGTTCCTGCTGGCAGAATCAATACACAGGATGAATTTGGTTTACCAGCGGTTCCTCATGCATCCCTTCGAAGCTAA

Protein sequence

MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEAVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQDEFGLPAVPHASLRS

Homology

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BLAST of Sed0009816 vs. NCBI nr
Match: XP_022957074.1 (vacuolar protein sorting-associated protein 60.2 [Cucurbita moschata] >XP_022985353.1 vacuolar protein sorting-associated protein 60.2 [Cucurbita maxima] >XP_023529845.1 vacuolar protein sorting-associated protein 60.2 [Cucurbita pepo subsp. pepo] >KAG6601234.1 Vacuolar protein sorting-associated protein 60.1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032026.1 Charged multivesicular body protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415.6 bits (1067), Expect = 2.8e-112
Identity = 219/236 (92.80%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           M+RVFGVKKDK+PPPSI DASERI KRG+SVDEKI KLDAELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MRRVFGVKKDKEPPPSIQDASERINKRGDSVDEKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
            DGVPSYLQPDKESDLEGELNLP AP+GHA VPAGR N Q  DE GLPAVP ASLR
Sbjct: 181 TDGVPSYLQPDKESDLEGELNLPSAPTGHAAVPAGRTNAQAEDELGLPAVPRASLR 236

[Close]

BLAST of Sed0009816 vs. NCBI nr
Match: XP_004135046.1 (vacuolar protein sorting-associated protein 60.1 [Cucumis sativus] >XP_031741404.1 vacuolar protein sorting-associated protein 60.1 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 3.7e-112
Identity = 219/236 (92.80%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDK+PPPSI DAS+RI KRGESVD+KI KLD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
           ADGVPSYLQPDKESD EGELNLP AP GHA VPAGR N Q  DE GLPAVPHASLR
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPHASLR 236

[Close]

BLAST of Sed0009816 vs. NCBI nr
Match: XP_023541762.1 (vacuolar protein sorting-associated protein 60.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.1 bits (1063), Expect = 8.2e-112
Identity = 219/236 (92.80%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDK+PPPSI DASERI KRGESVDEKI KLD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
           ADGVPSYLQPDKESDLEGELNLP AP+G A VPAGR N Q  DE GLPAVP ASLR
Sbjct: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLR 236

[Close]

BLAST of Sed0009816 vs. NCBI nr
Match: XP_038891460.1 (vacuolar protein sorting-associated protein 60.1 [Benincasa hispida])

HSP 1 Score: 413.7 bits (1062), Expect = 1.1e-111
Identity = 218/236 (92.37%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDK+PPPSI DASERI KRGESVD+KI KLD ELSRYKEQIKKTRPGP QEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASERINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPVQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
           ADGVPSYLQPDKESD EGELNLP AP+GHA VPAGR N Q  DE GLPAVP ASLR
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPTGHAAVPAGRTNAQAEDELGLPAVPRASLR 236

[Close]

BLAST of Sed0009816 vs. NCBI nr
Match: XP_022150683.1 (vacuolar protein sorting-associated protein 60.2 [Momordica charantia])

HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111
Identity = 218/236 (92.37%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDK+PPPSI DASERI KRG+SVDEKI KLDAELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASERINKRGDSVDEKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
           ADGVPSYLQPDKE DL+GELNLP AP+GHA VP GR N Q  DE GLPAVP ASLR
Sbjct: 181 ADGVPSYLQPDKEPDLDGELNLPSAPTGHAAVPPGRTNAQAEDELGLPAVPRASLR 236

[Close]

BLAST of Sed0009816 vs. ExPASy Swiss-Prot
Match: Q9FMC5 (Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702 GN=VPS60-2 PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 7.2e-103
Identity = 190/234 (81.20%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKR+FG K +K+PPPSI DAS+RI KRG+SV+EK+ +LDAEL +YK+QIK+TRPGPA EA
Sbjct: 1   MKRIFGAKNNKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVKIQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLGELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQDEFGLPAVPHASLR 235
           ADGVPSYLQPDKE DL  ELNLP AP GH   P GR   +DE+GLPAVP ASLR
Sbjct: 181 ADGVPSYLQPDKEPDLNDELNLPSAPMGHTGAPPGRAQAEDEWGLPAVPRASLR 234

[Close]

BLAST of Sed0009816 vs. ExPASy Swiss-Prot
Match: Q9LPN5 (Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702 GN=VPS60-1 PE=1 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.6e-102
Identity = 188/234 (80.34%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           M+RVFG KK+ +PPPSI DAS+RI KRG+SV++KI KLD EL +YKEQ+KKTRPGPAQEA
Sbjct: 1   MRRVFGAKKNTEPPPSIQDASDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVKIQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQDEFGLPAVPHASLR 235
           ADG+PSYLQPD E+D + ELNLP AP+GH   P GR   +DEFGLPAVP ASLR
Sbjct: 181 ADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGRAQAEDEFGLPAVPRASLR 234

[Close]

BLAST of Sed0009816 vs. ExPASy Swiss-Prot
Match: Q7T339 (Charged multivesicular body protein 5 OS=Danio rerio OX=7955 GN=chmp5 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.0e-45
Identity = 107/234 (45.73%), Postives = 145/234 (61.97%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K K PPP++ D    +  R ESVD+KIA+LDAEL +YK+Q+KK R GP++  
Sbjct: 1   MNRIFGRGKPKGPPPNLTDCISGVDSRAESVDKKIARLDAELMKYKDQMKKMRDGPSKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +AMRVLKQKRMYEGQRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKAMRVLKQKRMYEGQRDQLMQQSFNMEQANYTIQTLKDTKTTVEAMKIGAKEMKKAY 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K VKI  I++LQD++ D+M+ +NE+QE L RSY  P +IDED+L  ELDAL  ++     
Sbjct: 121 KNVKIDQIEDLQDQLEDMMEDANEVQEALSRSYGTP-EIDEDDLEAELDALGDEL----- 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ-----DEFGLPAVP 230
                  L  D  S L+   + P  P G    P  R   +     DEFGLP +P
Sbjct: 181 -------LLDDDNSYLDEASSAPAIPEG---APGDRTTNRDGVLVDEFGLPQIP 218

[Close]

BLAST of Sed0009816 vs. ExPASy Swiss-Prot
Match: Q9D7S9 (Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-44
Identity = 111/233 (47.64%), Postives = 145/233 (62.23%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           M R FG  K K PPPS+ D    +  R ES+D+KI++LDAEL +YK+QIKK R GPA+  
Sbjct: 1   MNRFFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K VKI  I++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ----DEFGLPAVP 230
           AD   SY        L+   + P  P G   VP    N      DEFGLP +P
Sbjct: 181 ADEDSSY--------LDEAASAPAIPEG---VPTDTKNKDGVLVDEFGLPQIP 217

[Close]

BLAST of Sed0009816 vs. ExPASy Swiss-Prot
Match: Q4QQV8 (Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-44
Identity = 111/233 (47.64%), Postives = 145/233 (62.23%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           M R FG  K K PPPS+ D    +  R ES+D+KI++LDAEL +YK+QIKK R GPA+  
Sbjct: 1   MNRFFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K VKI  I++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ----DEFGLPAVP 230
           AD   SY        L+   + P  P G   VP    N      DEFGLP +P
Sbjct: 181 ADEDSSY--------LDEAASAPAIPEG---VPTDTKNKDGVLVDEFGLPQIP 217

[Close]

BLAST of Sed0009816 vs. ExPASy TrEMBL
Match: A0A6J1JDD4 (vacuolar protein sorting-associated protein 60.2 OS=Cucurbita maxima OX=3661 GN=LOC111483361 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112
Identity = 219/236 (92.80%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           M+RVFGVKKDK+PPPSI DASERI KRG+SVDEKI KLDAELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MRRVFGVKKDKEPPPSIQDASERINKRGDSVDEKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
            DGVPSYLQPDKESDLEGELNLP AP+GHA VPAGR N Q  DE GLPAVP ASLR
Sbjct: 181 TDGVPSYLQPDKESDLEGELNLPSAPTGHAAVPAGRTNAQAEDELGLPAVPRASLR 236

[Close]

BLAST of Sed0009816 vs. ExPASy TrEMBL
Match: A0A6J1H0X2 (vacuolar protein sorting-associated protein 60.2 OS=Cucurbita moschata OX=3662 GN=LOC111458560 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112
Identity = 219/236 (92.80%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           M+RVFGVKKDK+PPPSI DASERI KRG+SVDEKI KLDAELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MRRVFGVKKDKEPPPSIQDASERINKRGDSVDEKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
            DGVPSYLQPDKESDLEGELNLP AP+GHA VPAGR N Q  DE GLPAVP ASLR
Sbjct: 181 TDGVPSYLQPDKESDLEGELNLPSAPTGHAAVPAGRTNAQAEDELGLPAVPRASLR 236

[Close]

BLAST of Sed0009816 vs. ExPASy TrEMBL
Match: A0A0A0KWL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.8e-112
Identity = 219/236 (92.80%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDK+PPPSI DAS+RI KRGESVD+KI KLD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
           ADGVPSYLQPDKESD EGELNLP AP GHA VPAGR N Q  DE GLPAVPHASLR
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPHASLR 236

[Close]

BLAST of Sed0009816 vs. ExPASy TrEMBL
Match: A0A6J1DA34 (vacuolar protein sorting-associated protein 60.2 OS=Momordica charantia OX=3673 GN=LOC111018756 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.8e-112
Identity = 218/236 (92.37%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDK+PPPSI DASERI KRG+SVDEKI KLDAELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASERINKRGDSVDEKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
           ADGVPSYLQPDKE DL+GELNLP AP+GHA VP GR N Q  DE GLPAVP ASLR
Sbjct: 181 ADGVPSYLQPDKEPDLDGELNLPSAPTGHAAVPPGRTNAQAEDELGLPAVPRASLR 236

[Close]

BLAST of Sed0009816 vs. ExPASy TrEMBL
Match: A0A6J1HUI7 (vacuolar protein sorting-associated protein 60.1-like OS=Cucurbita maxima OX=3661 GN=LOC111467579 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.8e-112
Identity = 218/236 (92.37%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDK+PPPSI DASERI KRGESVDEKI KLD EL+RYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELNRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQ--DEFGLPAVPHASLR 235
           ADGVPSYLQPDKESDLEGELNLP AP+G A VPAGR N Q  DE GLPAVP ASLR
Sbjct: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQVEDELGLPAVPRASLR 236

[Close]

BLAST of Sed0009816 vs. TAIR 10
Match: AT5G04850.1 (SNF7 family protein )

HSP 1 Score: 374.8 bits (961), Expect = 5.1e-104
Identity = 190/234 (81.20%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKR+FG K +K+PPPSI DAS+RI KRG+SV+EK+ +LDAEL +YK+QIK+TRPGPA EA
Sbjct: 1   MKRIFGAKNNKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVKIQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLGELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQDEFGLPAVPHASLR 235
           ADGVPSYLQPDKE DL  ELNLP AP GH   P GR   +DE+GLPAVP ASLR
Sbjct: 181 ADGVPSYLQPDKEPDLNDELNLPSAPMGHTGAPPGRAQAEDEWGLPAVPRASLR 234

[Close]

BLAST of Sed0009816 vs. TAIR 10
Match: AT3G10640.1 (SNF7 family protein )

HSP 1 Score: 372.5 bits (955), Expect = 2.5e-103
Identity = 188/234 (80.34%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           M+RVFG KK+ +PPPSI DAS+RI KRG+SV++KI KLD EL +YKEQ+KKTRPGPAQEA
Sbjct: 1   MRRVFGAKKNTEPPPSIQDASDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVKIQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQDEFGLPAVPHASLR 235
           ADG+PSYLQPD E+D + ELNLP AP+GH   P GR   +DEFGLPAVP ASLR
Sbjct: 181 ADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGRAQAEDEFGLPAVPRASLR 234

[Close]

BLAST of Sed0009816 vs. TAIR 10
Match: AT5G04850.2 (SNF7 family protein )

HSP 1 Score: 356.3 bits (913), Expect = 1.9e-98
Identity = 190/271 (70.11%), Postives = 212/271 (78.23%), Query Frame = 0


Query: 1   MKRVFGVKKDKQPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGPAQEA 60
           MKR+FG K +K+PPPSI DAS+RI KRG+SV+EK+ +LDAEL +YK+QIK+TRPGPA EA
Sbjct: 1   MKRIFGAKNNKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLG-------------- 180
           KTVKIQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLG              
Sbjct: 121 KTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGGKFFLCSLCCLSLG 180

Query: 181 -----------------------ELDALEADMGFETEADGVPSYLQPDKESDLEGELNLP 235
                                  ELDALEADMG ETEADGVPSYLQPDKE DL  ELNLP
Sbjct: 181 LVETISLCLLNSAPYTLYRFVNSELDALEADMGNETEADGVPSYLQPDKEPDLNDELNLP 240

[Close]

BLAST of Sed0009816 vs. TAIR 10
Match: AT3G10640.2 (SNF7 family protein )

HSP 1 Score: 276.9 bits (707), Expect = 1.5e-74
Identity = 139/169 (82.25%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 66  MRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMMKTVKI 125
           MRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMMKTVKI
Sbjct: 1   MRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMMKTVKI 60

Query: 126 QDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVP 185
           QDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETEADG+P
Sbjct: 61  QDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADMGNETEADGMP 120

Query: 186 SYLQPDKESDLEGELNLPPAPSGHAPVPAGRINTQDEFGLPAVPHASLR 235
           SYLQPD E+D + ELNLP AP+GH   P GR   +DEFGLPAVP ASLR
Sbjct: 121 SYLQPDTETDYDSELNLPAAPTGHNGAPHGRAQAEDEFGLPAVPRASLR 169

[Close]

BLAST of Sed0009816 vs. TAIR 10
Match: AT4G29160.1 (SNF7 family protein )

HSP 1 Score: 78.6 bits (192), Expect = 7.6e-15
Identity = 71/220 (32.27%), Postives = 101/220 (45.91%), Query Frame = 0


Query: 1   MKRVFGVKKDK----QPPPSINDASERIGKRGESVDEKIAKLDAELSRYKEQIKKTRPGP 60
           M R+FG  K +    Q    +N+  E + K+ + +   + K  AE+ + KE  +      
Sbjct: 2   MNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVL---LKKAGAEVEKAKEYSRAKN--- 61

Query: 61  AQEAVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKEL 120
                K  A++ LK+KR+YEGQ + L N    +       EG K   +T+ AL+S    +
Sbjct: 62  -----KRAAIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAM 121

Query: 121 KGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMG 180
           K M K   I D+D   DE+ +  +   +IQE L        D DEDEL  ELD LE++  
Sbjct: 122 KAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESE-- 181

Query: 181 FETEADGVPSYLQPDKESDLEGELNLPPAPSGHAPVPAGR 217
            E E+      LQP            PP PS   PVPAGR
Sbjct: 182 -ELES----QLLQP--------ATTAPPLPS--VPVPAGR 193

The following BLAST results are available for this feature:

BLAST of Sed0009816 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957074.1	2.8e-112	92.80	vacuolar protein sorting-associated protein 60.2 [Cucurbita moschata] >XP_022985...	[more]
XP_004135046.1	3.7e-112	92.80	vacuolar protein sorting-associated protein 60.1 [Cucumis sativus] >XP_031741404...	[more]
XP_023541762.1	8.2e-112	92.80	vacuolar protein sorting-associated protein 60.1-like [Cucurbita pepo subsp. pep...	[more]
XP_038891460.1	1.1e-111	92.37	vacuolar protein sorting-associated protein 60.1 [Benincasa hispida]	[more]
XP_022150683.1	1.4e-111	92.37	vacuolar protein sorting-associated protein 60.2 [Momordica charantia]	[more]

BLAST of Sed0009816 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMC5	7.2e-103	81.20	Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LPN5	3.6e-102	80.34	Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702...	[more]
Q7T339	9.0e-45	45.73	Charged multivesicular body protein 5 OS=Danio rerio OX=7955 GN=chmp5 PE=2 SV=1	[more]
Q9D7S9	1.5e-44	47.64	Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=...	[more]
Q4QQV8	1.5e-44	47.64	Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=...	[more]

BLAST of Sed0009816 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JDD4	1.4e-112	92.80	vacuolar protein sorting-associated protein 60.2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1H0X2	1.4e-112	92.80	vacuolar protein sorting-associated protein 60.2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A0A0KWL4	1.8e-112	92.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=4 SV=1	[more]
A0A6J1DA34	6.8e-112	92.37	vacuolar protein sorting-associated protein 60.2 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1HUI7	8.8e-112	92.37	vacuolar protein sorting-associated protein 60.1-like OS=Cucurbita maxima OX=366...	[more]

BLAST of Sed0009816 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04850.1	5.1e-104	81.20	SNF7 family protein	[more]
AT3G10640.1	2.5e-103	80.34	SNF7 family protein	[more]
AT5G04850.2	1.9e-98	70.11	SNF7 family protein	[more]
AT3G10640.2	1.5e-74	82.25	SNF7 family protein	[more]
AT4G29160.1	7.6e-15	32.27	SNF7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 34..54
None	No IPR available	COILS	Coil	Coil	coord: 63..83
None	No IPR available	GENE3D	6.10.250.1710		coord: 58..111 e-value: 1.2E-22 score: 81.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..170
None	No IPR available	PANTHER	PTHR22761	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 1..165
None	No IPR available	PANTHER	PTHR22761:SF54	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 60.1	coord: 1..165
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 1..144 e-value: 8.7E-43 score: 145.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009816.1	Sed0009816.1	mRNA
Sed0009816.2	Sed0009816.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway
biological_process	GO:0006900	vesicle budding from membrane
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005771	multivesicular body