Sed0009782 (gene) Chayote v1

Overview


Name	Sed0009782
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Coiled-coil domain-containing protein SCD2
Location	LG07: 1254203 .. 1256078 (+)
RNA-Seq Expression	Sed0009782
Synteny	Sed0009782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAATTCTTCTCAGTGCTTCAAATTCACTCTCATTGCGAATCTTCCCACTCAATCAAGCTGATTTCAGGACCCCCTTCCAGGTTCGGATCCATTTCTCTATCTCGATTCTTCTTCATTTCGTTGAATTCATTCAAGTTTTCTTCAAATTTTCAGCGGAAAGACTTCTTTACTATTTCAATTCGCTATCAATTTGGGTTTGGAGGGAAACGTTACCTTCATCTGCAACCGCCGCAAATTGGAGAACAAACCACCGTATCTCTCGCAGGTAATTTCTCTTTCTCTCTCTTTTTCTGTATCTGTATGTTGTGGTTATATAGAATTGTTGGGAGTAGTTATAAGGGAGATAAACATGATATGAGGCTTTTGGGTGTAACCAAAACTACTTATATATTAGTATAGTATTGTCCACTTTAACCGAACATTCTCACCGCTAAGTCAGGGATCACTCTAATATCACTTGTTAAGTGACGGAAAACTCTCTAATAATCTATACATTGGTATAATATTGTCTACTTTAGTCATAAGTTCATGATTTTATTTTGGTTTCACCCCATAAAACTTGTACCAATGAGTCCCCAAGGGGTGACCGTGATTGAAGACTTGGGGTTTGAAAGTATGCTTCTTTCAAGGTCCTGAGTTTGAAACTCACCGGTAATATTACTCCTTCGATGTATTTGGTGTCTGGCTTAGGAATGGGCGTGGTTACCCTTATTTCAAAAATAAAACTTGTACCAATAGAGATATTTGTCCACTCTTGTAAATATATTAACTAATGTGAGATTACACTTTGTTTTCTCAACAAGAATGGAATAGAATAGTATGTAGCAAGATTTTTGAACTTGGGCATTTTTAACATCCAGGGAGTTGATCCAACATCTGTAACCTTTCAGCGCATTCAAATGAAGTCGGTGATCGTTTCATTCTTTATCTTGATTGTTCTTTAGTTGCTTAAATTGAACCTGTATTCTCTGTGATTATGAATTTCAAGGTATTTAGAGGACGAGGAAGGAATTAAGAAGTACTTCTCTGCATTTCACTTGCATCGTACACTTCCTGTAGCAGTTGTTATTGATGATTTTGGAGATTTTTTCGAGGAAAGGTCTTCATATTTTCCCATATTTTTTAATATATAACTTCTATCCACTACCAGTTCTATGTGCTTTACTGTGTATTTCTTGATGGTTTTATTTCCCTTTTGAACTTCTCCTTCTATTTAAAAGGCGATGTCAAGAAAAATATGCCAATCCTCGCGGAAGAGACTTAGCAATGGTTAGAACATTAGCACTTTGTCACAATGCTATGGGCCTAGCAAAGTAGGTTTGCATCTCTTAGAACTATCAATGACTATATTAATCTCTTAGAAGACCCCCTTGTTTTGTCTGGTTCTAACTTGAAACATTTTTCAGTCAGAGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCTCCAAGGTTGATTTTCATTTATAAGAGATGGGTTTCAACCATTTTCACTATTAGAGGTTAGTAGTTTCAGACTTTCAGCTGACCGATTGCTCAACCCATATTCAAAGCAATTGCTCTTGTTTTTTTGTTATTTGTGTTTTAAGTTGTAATTTCAGAAAATGCAGACGATAAGTGGAGCGAACTGATTGTGTGGTCTTCGTGATGGTTAACTGATAAGCCATCTTGATTCTTGACCTTCTGTTATTGAATTAGTTTGGGTTTCTGTTGAAGGTGATGGTTCTGGTTGGTTCACTCTGAGAAGTATCAACAACTGTGGAAATGACTGTTGTTTGAGGACTAGAAGTGCAAAGTACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAATCTCTGAAGACAGTAATGAAAAATGA

mRNA sequence

ATGGAGAAATTCTTCTCAGTGCTTCAAATTCACTCTCATTGCGAATCTTCCCACTCAATCAAGCTGATTTCAGGACCCCCTTCCAGCGGAAAGACTTCTTTACTATTTCAATTCGCTATCAATTTGGGTTTGGAGGGAAACGTTACCTTCATCTGCAACCGCCGCAAATTGGAGAACAAACCACCGTATCTCTCGCAGGGAGTTGATCCAACATCTGTAACCTTTCAGCGCATTCAAATGAAGTATTTAGAGGACGAGGAAGGAATTAAGAAGTACTTCTCTGCATTTCACTTGCATCGTACACTTCCTGTAGCAGTTGTTATTGATGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAATATGCCAATCCTCGCGGAAGAGACTTAGCAATGGTTAGAACATTAGCACTTTGTCACAATGCTATGGGCCTAGCAAATCAGAGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCTCCAAGGTTGATTTTCATTTATAAGAGATGGGTTTCAACCATTTTCACTATTAGAGGTGATGGTTCTGGTTGGTTCACTCTGAGAAGTATCAACAACTGTGGAAATGACTGTTGTTTGAGGACTAGAAGTGCAAAGTACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAATCTCTGAAGACAGTAATGAAAAATGA

Coding sequence (CDS)

ATGGAGAAATTCTTCTCAGTGCTTCAAATTCACTCTCATTGCGAATCTTCCCACTCAATCAAGCTGATTTCAGGACCCCCTTCCAGCGGAAAGACTTCTTTACTATTTCAATTCGCTATCAATTTGGGTTTGGAGGGAAACGTTACCTTCATCTGCAACCGCCGCAAATTGGAGAACAAACCACCGTATCTCTCGCAGGGAGTTGATCCAACATCTGTAACCTTTCAGCGCATTCAAATGAAGTATTTAGAGGACGAGGAAGGAATTAAGAAGTACTTCTCTGCATTTCACTTGCATCGTACACTTCCTGTAGCAGTTGTTATTGATGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAATATGCCAATCCTCGCGGAAGAGACTTAGCAATGGTTAGAACATTAGCACTTTGTCACAATGCTATGGGCCTAGCAAATCAGAGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCTCCAAGGTTGATTTTCATTTATAAGAGATGGGTTTCAACCATTTTCACTATTAGAGGTGATGGTTCTGGTTGGTTCACTCTGAGAAGTATCAACAACTGTGGAAATGACTGTTGTTTGAGGACTAGAAGTGCAAAGTACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAATCTCTGAAGACAGTAATGAAAAATGA

Protein sequence

MEKFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENKPPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNEK

Homology

[Close]

BLAST of Sed0009782 vs. NCBI nr
Match: XP_011656789.1 (uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetical protein Csa_004885 [Cucumis sativus])

HSP 1 Score: 442.2 bits (1136), Expect = 2.8e-120
Identity = 210/231 (90.91%), Postives = 218/231 (94.37%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENK 60
           MEKFFSV QIH+HCESSHSIKL+SGPPS GKTSLLFQFA NLGLEGNVTFICNRRKLENK
Sbjct: 15  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 74

Query: 61  PPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTS TFQRIQMKYLED++GIKKYFSAFHLH TLPVAVVIDDFGDFFEERRC
Sbjct: 75  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 134

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTI 180
           QEKYANPRGRDLAMVRTLALC NA+ LANQ RPCQLVLSDTHHGESPRLIFIYKRWV TI
Sbjct: 135 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 194

Query: 181 FTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNEK 232
           FTIRGDG+GWF LRSINNCG DCCLRT+ AKYSIALQFLSLEEISEDS E+
Sbjct: 195 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 245

[Close]

BLAST of Sed0009782 vs. NCBI nr
Match: XP_038906786.1 (uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida])

HSP 1 Score: 441.8 bits (1135), Expect = 3.6e-120
Identity = 209/231 (90.48%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENK 60
           MEKFFSV QIH+HC+SSHSI L+SGPPS GKTSLLFQFA NLGL+GNVTFICNRRKLENK
Sbjct: 29  MEKFFSVRQIHTHCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLKGNVTFICNRRKLENK 88

Query: 61  PPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTS TFQRIQMKYLED+EGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC
Sbjct: 89  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 148

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTI 180
           Q+KYANPRGRDLAMVRTLALCHNA+ LAN SRPCQLVLSD +HGESPRLIFIYKRWV TI
Sbjct: 149 QDKYANPRGRDLAMVRTLALCHNAVSLANPSRPCQLVLSDAYHGESPRLIFIYKRWVPTI 208

Query: 181 FTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNEK 232
           FTI GDG GWFTLRSINNCGNDCCLR RSAKYSIALQFLSLEEISEDS+E+
Sbjct: 209 FTITGDGFGWFTLRSINNCGNDCCLRARSAKYSIALQFLSLEEISEDSSEQ 259

[Close]

BLAST of Sed0009782 vs. NCBI nr
Match: XP_008459907.1 (PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >ADN33703.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 441.4 bits (1134), Expect = 4.7e-120
Identity = 208/231 (90.04%), Postives = 218/231 (94.37%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENK 60
           MEKFFSV QIH+ CESSHSIKL+SGPPS GKTSLLFQFA NLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTS TF+RIQMKYLED++GIKKYFSAFHLH TLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTI 180
           Q KYANPRGRD+AMVRTLALCHNA+ LANQ RPCQLVLSDTHHGESPRLIFIYKRWV TI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNEK 232
           FTIRGDG+GWF LRSINNCGNDCCLRT+ AKYSIALQFLSLEEISEDS E+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of Sed0009782 vs. NCBI nr
Match: KAA0039853.1 (uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 438.3 bits (1126), Expect = 4.0e-119
Identity = 207/231 (89.61%), Postives = 217/231 (93.94%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENK 60
           MEKFFSV QIH+ CESSHSIKL+SGPPS GKTSLLFQFA NLGLEGNVTFICNRRKLENK
Sbjct: 56  MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 115

Query: 61  PPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTS TF+RIQMKYLED++GIKKYFSAFHLH TLPVAVVIDDFGDFFEERRC
Sbjct: 116 PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 175

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTI 180
           Q KYANPRGRD+AMVRTLALCHNA+ LANQ RPCQLVLSDTHHGESPRLIFIYKRWV TI
Sbjct: 176 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 235

Query: 181 FTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNEK 232
           FTIRGDG+ WF LRSINNCGNDCCLRT+ AKYSIALQFLSLEEISEDS E+
Sbjct: 236 FTIRGDGTRWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

[Close]

BLAST of Sed0009782 vs. NCBI nr
Match: XP_022959968.1 (uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959970.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959971.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata])

HSP 1 Score: 433.7 bits (1114), Expect = 9.8e-118
Identity = 205/228 (89.91%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 3   KFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENKPP 62
           +FFSV QI + C+SSHSI L+SGPPS GKTSLLFQFA NLGLEGNVTFICNRRKLENKPP
Sbjct: 6   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 65

Query: 63  YLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122
           YLSQGVDP S TFQRIQMKYLED+EGI KYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 66  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 125

Query: 123 KYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTIFT 182
           KYANPRGRDLAMVRTLALCHNAM LANQ RPCQLVLSDTHHGESPRLIFIYKRWV TIFT
Sbjct: 126 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 185

Query: 183 IRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNE 231
           IRGDGSGWF LRSINNCGN+CCLRT+SAKYSIALQFLSLEE+SED  E
Sbjct: 186 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 233

[Close]

BLAST of Sed0009782 vs. ExPASy TrEMBL
Match: A0A0A0K9H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.3e-120
Identity = 210/231 (90.91%), Postives = 218/231 (94.37%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENK 60
           MEKFFSV QIH+HCESSHSIKL+SGPPS GKTSLLFQFA NLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTS TFQRIQMKYLED++GIKKYFSAFHLH TLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTI 180
           QEKYANPRGRDLAMVRTLALC NA+ LANQ RPCQLVLSDTHHGESPRLIFIYKRWV TI
Sbjct: 121 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNEK 232
           FTIRGDG+GWF LRSINNCG DCCLRT+ AKYSIALQFLSLEEISEDS E+
Sbjct: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 231

[Close]

BLAST of Sed0009782 vs. ExPASy TrEMBL
Match: A0A1S3CAT0 (uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.3e-120
Identity = 208/231 (90.04%), Postives = 218/231 (94.37%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENK 60
           MEKFFSV QIH+ CESSHSIKL+SGPPS GKTSLLFQFA NLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTS TF+RIQMKYLED++GIKKYFSAFHLH TLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTI 180
           Q KYANPRGRD+AMVRTLALCHNA+ LANQ RPCQLVLSDTHHGESPRLIFIYKRWV TI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNEK 232
           FTIRGDG+GWF LRSINNCGNDCCLRT+ AKYSIALQFLSLEEISEDS E+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of Sed0009782 vs. ExPASy TrEMBL
Match: E5GB61 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.3e-120
Identity = 208/231 (90.04%), Postives = 218/231 (94.37%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENK 60
           MEKFFSV QIH+ CESSHSIKL+SGPPS GKTSLLFQFA NLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTS TF+RIQMKYLED++GIKKYFSAFHLH TLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTI 180
           Q KYANPRGRD+AMVRTLALCHNA+ LANQ RPCQLVLSDTHHGESPRLIFIYKRWV TI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNEK 232
           FTIRGDG+GWF LRSINNCGNDCCLRT+ AKYSIALQFLSLEEISEDS E+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of Sed0009782 vs. ExPASy TrEMBL
Match: A0A5A7T9Y8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001280 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 207/231 (89.61%), Postives = 217/231 (93.94%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENK 60
           MEKFFSV QIH+ CESSHSIKL+SGPPS GKTSLLFQFA NLGLEGNVTFICNRRKLENK
Sbjct: 56  MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 115

Query: 61  PPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTS TF+RIQMKYLED++GIKKYFSAFHLH TLPVAVVIDDFGDFFEERRC
Sbjct: 116 PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 175

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTI 180
           Q KYANPRGRD+AMVRTLALCHNA+ LANQ RPCQLVLSDTHHGESPRLIFIYKRWV TI
Sbjct: 176 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 235

Query: 181 FTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNEK 232
           FTIRGDG+ WF LRSINNCGNDCCLRT+ AKYSIALQFLSLEEISEDS E+
Sbjct: 236 FTIRGDGTRWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

[Close]

BLAST of Sed0009782 vs. ExPASy TrEMBL
Match: A0A6J1H6C8 (uncharacterized protein LOC111460863 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460863 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.8e-118
Identity = 205/228 (89.91%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 3   KFFSVLQIHSHCESSHSIKLISGPPSSGKTSLLFQFAINLGLEGNVTFICNRRKLENKPP 62
           +FFSV QI + C+SSHSI L+SGPPS GKTSLLFQFA NLGLEGNVTFICNRRKLENKPP
Sbjct: 6   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 65

Query: 63  YLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122
           YLSQGVDP S TFQRIQMKYLED+EGI KYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 66  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 125

Query: 123 KYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFIYKRWVSTIFT 182
           KYANPRGRDLAMVRTLALCHNAM LANQ RPCQLVLSDTHHGESPRLIFIYKRWV TIFT
Sbjct: 126 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 185

Query: 183 IRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDSNE 231
           IRGDGSGWF LRSINNCGN+CCLRT+SAKYSIALQFLSLEE+SED  E
Sbjct: 186 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 233

[Close]

BLAST of Sed0009782 vs. TAIR 10
Match: AT3G23255.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-64
Identity = 129/236 (54.66%), Postives = 168/236 (71.19%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSH---SIKLISGPPSSGKTSLLFQFAINLGLEGNVT---FICNR 60
           +E+FF   +  S  + +H   ++ L+SGP SSGKTSLLFQ A+N+      T   FIC+R
Sbjct: 2   VERFFPTKR--SSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHR 61

Query: 61  RKLENKPPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRT--LPVAVVIDDFG 120
           +K+E+ PP+LSQG+DP+S  F RIQ+KY++D+EGI+KYF+AFHLH    LP AV+IDDFG
Sbjct: 62  KKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFG 121

Query: 121 DFFEERRCQEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFI 180
           D+F +        N R RD+AMVRTLALCHNA+  AN+   C+LVLS+T+HG+SPR +FI
Sbjct: 122 DYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDANRKALCELVLSETNHGDSPRSLFI 181

Query: 181 YKRWVSTIFTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDS 229
           YKRW+  IFTI+G G G F L S     ND     RSAKYSIALQ+L LE+I +DS
Sbjct: 182 YKRWIPKIFTIKGHGDGSFLLTS-----ND--TSERSAKYSIALQYLILEQIIDDS 225

[Close]

BLAST of Sed0009782 vs. TAIR 10
Match: AT3G23255.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 52 Blast hits to 52 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 238.4 bits (607), Expect = 5.6e-63
Identity = 128/236 (54.24%), Postives = 168/236 (71.19%), Query Frame = 0


Query: 1   MEKFFSVLQIHSHCESSH---SIKLISGPPSSGKTSLLFQFAINLGLEGNVT---FICNR 60
           +E+FF   +  S  + +H   ++ L+SGP SSGKTSLLFQ A+N+      T   FIC+R
Sbjct: 2   VERFFPTKR--SSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHR 61

Query: 61  RKLENKPPYLSQGVDPTSVTFQRIQMKYLEDEEGIKKYFSAFHLHRT--LPVAVVIDDFG 120
           +K+E+ PP+LSQG+DP+S  F RIQ+KY++D+EGI+KYF+AFHLH    LP AV+IDDFG
Sbjct: 62  KKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFG 121

Query: 121 DFFEERRCQEKYANPRGRDLAMVRTLALCHNAMGLANQSRPCQLVLSDTHHGESPRLIFI 180
           D+F +        N R RD+AMVRTLALCHNA+  A ++  C+LVLS+T+HG+SPR +FI
Sbjct: 122 DYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDAKKAL-CELVLSETNHGDSPRSLFI 181

Query: 181 YKRWVSTIFTIRGDGSGWFTLRSINNCGNDCCLRTRSAKYSIALQFLSLEEISEDS 229
           YKRW+  IFTI+G G G F L S     ND     RSAKYSIALQ+L LE+I +DS
Sbjct: 182 YKRWIPKIFTIKGHGDGSFLLTS-----ND--TSERSAKYSIALQYLILEQIIDDS 224

The following BLAST results are available for this feature:

BLAST of Sed0009782 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656789.1	2.8e-120	90.91	uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetica...	[more]
XP_038906786.1	3.6e-120	90.48	uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida]	[more]
XP_008459907.1	4.7e-120	90.04	PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 P...	[more]
KAA0039853.1	4.0e-119	89.61	uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa]	[more]
XP_022959968.1	9.8e-118	89.91	uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_0229599...	[more]

BLAST of Sed0009782 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0009782 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9H1	1.3e-120	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1	[more]
A0A1S3CAT0	2.3e-120	90.04	uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=...	[more]
E5GB61	2.3e-120	90.04	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7T9Y8	1.9e-119	89.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1H6C8	4.8e-118	89.91	uncharacterized protein LOC111460863 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Sed0009782 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23255.2	1.0e-64	54.66	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G23255.1	5.6e-63	54.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 16..216 e-value: 1.0E-6 score: 30.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 19..194
None	No IPR available	PANTHER	PTHR28653	FAMILY NOT NAMED	coord: 2..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009782.1	Sed0009782.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation