Sed0009759 (gene) Chayote v1

Overview


Name	Sed0009759
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic
Location	LG11: 30262728 .. 30265253 (-)
RNA-Seq Expression	Sed0009759
Synteny	Sed0009759

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGTACATTGCCTTCTAGAAGTAGTTTGCAGACATGTCCTTATTAGTAAACTACTTTTCTCTAGTGTCCTTTGTGTGGCCATAGAAAAAGATAAGAAAAAGAAAAAAGATAAGGGAGAAAAGAAAAGGGTATGAAATTATGAGAGAGTTTGTTTGTGAGAGATTGGAGTGGACAAAGTTTAGAACATGAACTTCTCTCTTGGCCTTCACATCCCCAAGGCCTTGCCTTCTCTTCTTTCTTCTTCCAATTCCATATTTCCTTCTCTCTCTTCAACCTTTAAGCTTCTCAAATTCCCTTCAAATTCAAACCCCATTAAAAATGTTCTTTCTTTACCTATTTCTCTGTTTTTCTCTCTCTATTCTTTCTCTCTCTAACCCCTAATTTTGTTTTGGGTTTTAGTTTCAGGTAGTGGCCTGCATCAAACAAGATCCCATTGGGTTTTTTCACCAAAATAAAACCAGTTTGGCTCTTCAACTTGCTGCCCTTTTAGCCACTGTAAGCAAGTTCCAATTTTTATCCCCTTTTTTTTCTTATTCTAAATTTGAACAAAGATTAAATTAACATTCTTGATTTTGGGTGATTTCTTGGTTGAATTTTAGCCATTTTGATTGGGTAGGATGTATTAAAGTGTGCATAGAGAAATGTTTTTGGATCAATTTAAACTTTGGGGTTAGTCAATAAATAAATTCATTCATGTATATTAGAACAATTCAACTCAATCCAACAGATATATTTTCTCTGTAGGTTGAGTTGTCCGGTTGGAAATATCTCACCAATCTTCTTTAAATTCAAATTCATAACTCGCAAATATGTAAACAAAATAAAGAAAGAATTGTATAATTCTAGATTTAAATTTGAATTATTTATCTATTTCGTGTATATTTACTATCTTCTTGATTAGTTTTATACACATATATTTTATATTATTCTTAGTTTGGATTGAATTGAATTGAGTCGAGCAAAAAAACGGTTGACTAGAGAATACATCTAACATGAAAACACATGTATGGTTTGGGTTGGATAGTCCAAATTTTCATAATGTCAGTTCTTTTGTACGCCCGTAAGGCAAATTAAGTTTTTGCCACTTTGAATAAATTAGGTCTCATTTTAGTTTTTTGTTTCTCAAATTTAAGCCTACAACAATCACGTTATCATATGTTTTCCTTACTCGATGCCTACATCTTGGCTATATTTTTATAAACCAAATTAAAATTTGGAAATAAAAAAAAGTAACTTCTAAAAGATAGATGCATTATAAAAAGATAGAACACATGCTAGGAAATTTGAGTAAAAATAAGCTTAAAATTCAAAAATCAAATCAAAAGCCAAATGGTTATCGAACCGGGACGTAGAAATTTAGTTTTATTAGTGAGTTAAAAATTGGATTGAAAATGAAATTGGAACAGGTTGGGGAACCAGCCTTTGGTGTAACAGGGGAGAACAACCATGAAGTTCAATTGACATGGATTTTGATACAAGCAGCCATTGTTGCATTCTTTTACTTCCTTGTTTTTCCTGTAAGAATTTTCCCTTTCTTTCCTTTTTATCTTTTTAATTCTCTCTTTTTTTTAATGAAATTTTGGGTGGAAATTTGCAGCCAATCATCATGAACTGGCTGAGGATAAGATGGTATAGAAGAAACTTATTGGAAATGTACTTCCAATTCTTGTGTGTCTTCCTTTTCTTCCCTGGGTAAGTATATATATACTTCTATACATATATATTTGGATTTCAAAGTTATTTTTATAGAATATTTCAAATAAATGGGCTTTTGCATATATATTACAAAATGGTTAAAATATTACTTAACTAGTACAATAATAAAAATATTTGCATACATAACAAAAAAATGTAAATTAATAGATTTCCATATTGATAGATTCTATCAACAGATGCTGATAGAATCAATTACTAATAAATAAAGTAAATTGATAGTCTTCCATTAGATTCTATTCATAATGATAATAAAATTGATAGACTTCCATCATTAGAGAATGATAGATTCTATCAAAAGTGTTGGATAAAAAAAAACATATAGAGATTTTTTAAAAACAGAGGCAGAATTTGCTATAAACGAATTATTTTTAAAAAGTTGCTATAATAATAAATTGAGGTAAAAAAAGTTTGCAAATTTCCTAATAATAATAATATGTGGTGCAGAATTCTATTGTGGGCGCCATTTCTGAACTTCAGAAAAATGCCTCGAGATCCAACGATGAAGTATCCATGGTCAACGCCCCAAGATCCATCTCAGATTAAAAATGCTTACTTCAAATACCCATTTGCTAAGCCTGAAGATTATGACTGGTAATTTAAATGTTTTGTAAAATTGTCTCTTCCATTTTCCAACAATTCAAAACTTTAATTTCTTTCCATTATTGTATAATCAATGCTTCTAGTGGAAATATAAAGTCCTCTTTTTTTTAGTACATATTATTATGAGACAAATACTGATTTTCGGGATCGAACATATGACGCTGGTGTTGGACTGATTTACAACCAAATAATAAAATCATTGCGCCAC

mRNA sequence

GTTGGTACATTGCCTTCTAGAAGTAGTTTGCAGACATGTCCTTATTAGTAAACTACTTTTCTCTAGTGTCCTTTGTGTGGCCATAGAAAAAGATAAGAAAAAGAAAAAAGATAAGGGAGAAAAGAAAAGGGTATGAAATTATGAGAGAGTTTGTTTGTGAGAGATTGGAGTGGACAAAGTTTAGAACATGAACTTCTCTCTTGGCCTTCACATCCCCAAGGCCTTGCCTTCTCTTCTTTCTTCTTCCAATTCCATATTTCCTTCTCTCTCTTCAACCTTTAAGCTTCTCAAATTCCCTTCAAATTCAAACCCCATTAAAAATTTTCAGGTAGTGGCCTGCATCAAACAAGATCCCATTGGGTTTTTTCACCAAAATAAAACCAGTTTGGCTCTTCAACTTGCTGCCCTTTTAGCCACTGTTGGGGAACCAGCCTTTGGTGTAACAGGGGAGAACAACCATGAAGTTCAATTGACATGGATTTTGATACAAGCAGCCATTGTTGCATTCTTTTACTTCCTTGTTTTTCCTCCAATCATCATGAACTGGCTGAGGATAAGATGGTATAGAAGAAACTTATTGGAAATGTACTTCCAATTCTTGTGTGTCTTCCTTTTCTTCCCTGGAATTCTATTGTGGGCGCCATTTCTGAACTTCAGAAAAATGCCTCGAGATCCAACGATGAAGTATCCATGGTCAACGCCCCAAGATCCATCTCAGATTAAAAATGCTTACTTCAAATACCCATTTGCTAAGCCTGAAGATTATGACTGGTAATTTAAATGTTTTGTAAAATTGTCTCTTCCATTTTCCAACAATTCAAAACTTTAATTTCTTTCCATTATTGTATAATCAATGCTTCTAGTGGAAATATAAAGTCCTCTTTTTTTTAGTACATATTATTATGAGACAAATACTGATTTTCGGGATCGAACATATGACGCTGGTGTTGGACTGATTTACAACCAAATAATAAAATCATTGCGCCAC

Coding sequence (CDS)

ATGAACTTCTCTCTTGGCCTTCACATCCCCAAGGCCTTGCCTTCTCTTCTTTCTTCTTCCAATTCCATATTTCCTTCTCTCTCTTCAACCTTTAAGCTTCTCAAATTCCCTTCAAATTCAAACCCCATTAAAAATTTTCAGGTAGTGGCCTGCATCAAACAAGATCCCATTGGGTTTTTTCACCAAAATAAAACCAGTTTGGCTCTTCAACTTGCTGCCCTTTTAGCCACTGTTGGGGAACCAGCCTTTGGTGTAACAGGGGAGAACAACCATGAAGTTCAATTGACATGGATTTTGATACAAGCAGCCATTGTTGCATTCTTTTACTTCCTTGTTTTTCCTCCAATCATCATGAACTGGCTGAGGATAAGATGGTATAGAAGAAACTTATTGGAAATGTACTTCCAATTCTTGTGTGTCTTCCTTTTCTTCCCTGGAATTCTATTGTGGGCGCCATTTCTGAACTTCAGAAAAATGCCTCGAGATCCAACGATGAAGTATCCATGGTCAACGCCCCAAGATCCATCTCAGATTAAAAATGCTTACTTCAAATACCCATTTGCTAAGCCTGAAGATTATGACTGGTAA

Protein sequence

MNFSLGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNPIKNFQVVACIKQDPIGFFHQNKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNWLRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKNAYFKYPFAKPEDYDW

Homology

[Close]

BLAST of Sed0009759 vs. NCBI nr
Match: XP_038875378.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida])

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84
Identity = 161/197 (81.73%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MNFSLGLHIPKALPSLLSSSNSIFPSLSSTFKL--LKFPSNSNPIKNFQVVACIKQDPIG 60
           MN SLGLHIPKALPS LSSS ++FPSLSS+FKL  L  PSNS  +KNF+VV  IK+DP+G
Sbjct: 1   MNCSLGLHIPKALPS-LSSSKTLFPSLSSSFKLHNLNLPSNSK-LKNFEVVGSIKEDPVG 60

Query: 61  FFHQNKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIM 120
           + HQ KTSLALQLAA+LATVGE A  VTGENNHEV LTWIL Q  IV FFYFLVFPPIIM
Sbjct: 61  YLHQKKTSLALQLAAILATVGEAANAVTGENNHEVPLTWILAQLGIVGFFYFLVFPPIIM 120

Query: 121 NWLRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQI 180
           NWLRIRWYRRNLLEMY QF+CVFLFFPGILLWAPFLNFRK PRDP+MKYPWSTPQ+PSQI
Sbjct: 121 NWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQI 180

Query: 181 KNAYFKYPFAKPEDYDW 196
           KNAY KYPFAKPEDYDW
Sbjct: 181 KNAYLKYPFAKPEDYDW 195

[Close]

BLAST of Sed0009759 vs. NCBI nr
Match: KAG6601873.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 158/195 (81.03%), Postives = 167/195 (85.64%), Query Frame = 0


Query: 1   MNFSLGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNPIKNFQVVACIKQDPIGFF 60
           MN SLGLHIPKALPS LSSS +I P LS+ FKLLK PSN   I NFQVVACI++DPIGF 
Sbjct: 1   MNCSLGLHIPKALPS-LSSSKTISPFLSAPFKLLKLPSNPTSI-NFQVVACIREDPIGFL 60

Query: 61  HQNKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNW 120
            Q KTSL+LQ AALLATV EPA  VTG+NNHEV LTWIL Q  IV FFYFLVFPPIIMNW
Sbjct: 61  RQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNW 120

Query: 121 LRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKN 180
           LRIRWYRRNLLEMY QF+CVFL FPGILLWAPFLNFRK PRDP+MKYPWSTPQ+PSQIKN
Sbjct: 121 LRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKN 180

Query: 181 AYFKYPFAKPEDYDW 196
            Y KYPFAKPEDYDW
Sbjct: 181 GYLKYPFAKPEDYDW 193

[Close]

BLAST of Sed0009759 vs. NCBI nr
Match: XP_022953622.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 4.3e-82
Identity = 157/195 (80.51%), Postives = 167/195 (85.64%), Query Frame = 0


Query: 1   MNFSLGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNPIKNFQVVACIKQDPIGFF 60
           MN SLGLHIPKALPS LSSS +I P LS+ FKLLK PSN   I +FQVVACI++DPIGF 
Sbjct: 1   MNCSLGLHIPKALPS-LSSSKTISPFLSAPFKLLKLPSNPTSI-SFQVVACIREDPIGFL 60

Query: 61  HQNKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNW 120
            Q KTSL+LQ AALLATV EPA  VTG+NNHEV LTWIL Q  IV FFYFLVFPPIIMNW
Sbjct: 61  RQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMNW 120

Query: 121 LRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKN 180
           LRIRWYRRNLLEMY QF+CVFL FPGILLWAPFLNFRK PRDP+MKYPWSTPQ+PSQIKN
Sbjct: 121 LRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKN 180

Query: 181 AYFKYPFAKPEDYDW 196
            Y KYPFAKPEDYDW
Sbjct: 181 GYLKYPFAKPEDYDW 193

[Close]

BLAST of Sed0009759 vs. NCBI nr
Match: XP_022953630.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 309.7 bits (792), Expect = 1.8e-80
Identity = 155/195 (79.49%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MNFSLGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNPIKNFQVVACIKQDPIGFF 60
           MN SLGLHIPKALPS LSSS +I P LS+ FKLLK PSN   I    VVACI++DPIGF 
Sbjct: 1   MNCSLGLHIPKALPS-LSSSKTISPFLSAPFKLLKLPSNPTSI---SVVACIREDPIGFL 60

Query: 61  HQNKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNW 120
            Q KTSL+LQ AALLATV EPA  VTG+NNHEV LTWIL Q  IV FFYFLVFPPIIMNW
Sbjct: 61  RQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMNW 120

Query: 121 LRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKN 180
           LRIRWYRRNLLEMY QF+CVFL FPGILLWAPFLNFRK PRDP+MKYPWSTPQ+PSQIKN
Sbjct: 121 LRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKN 180

Query: 181 AYFKYPFAKPEDYDW 196
            Y KYPFAKPEDYDW
Sbjct: 181 GYLKYPFAKPEDYDW 191

[Close]

BLAST of Sed0009759 vs. NCBI nr
Match: XP_023527074.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-80
Identity = 155/195 (79.49%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MNFSLGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNPIKNFQVVACIKQDPIGFF 60
           MN SLGLHIPKALPS LSSS +I P LS+ FKLLK PS    I NFQVVA I++DPI F 
Sbjct: 1   MNCSLGLHIPKALPS-LSSSKTISPFLSAPFKLLKLPSKPTSI-NFQVVASIREDPIAFL 60

Query: 61  HQNKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNW 120
            Q KTSL+LQ AALLATV EPA  VTG+NNHEV LTWIL Q  IV FFYFLVFPPIIMNW
Sbjct: 61  RQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMNW 120

Query: 121 LRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKN 180
           LRIRWYRRNLLEMY QF+CVFL FPGILLWAPFLNFRK PRDP+MKYPWSTPQ+PSQIKN
Sbjct: 121 LRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKN 180

Query: 181 AYFKYPFAKPEDYDW 196
            Y KYPFAKPEDYDW
Sbjct: 181 GYLKYPFAKPEDYDW 193

[Close]

BLAST of Sed0009759 vs. ExPASy Swiss-Prot
Match: Q9CAC5 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhL PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.7e-47
Identity = 98/191 (51.31%), Postives = 122/191 (63.87%), Query Frame = 0


Query: 4   SLGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNPIKNFQVVACIKQDPIGFFHQN 63
           SLGL+ P ALPSL     S+      T       +  + +   +  AC   D +G     
Sbjct: 6   SLGLYAPNALPSLSLKPRSVKSPFCITSHTKPNDTLLHNVNKMRAKAC---DILG---AK 65

Query: 64  KTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNWLRI 123
           KT LA QL A+LAT+  PA  +TG NN + +L+ +++   I++ +YFLV PPIIMNWLR+
Sbjct: 66  KTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGIISVWYFLVMPPIIMNWLRV 125

Query: 124 RWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKNAYF 183
           RWYRR   EMY QF+ VF+FFPG+LLWAPFLNFRK PRDP MK PW  P DP  IKN Y 
Sbjct: 126 RWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNMKNPWDKPTDPDSIKNVYL 185

Query: 184 KYPFAKPEDYD 195
           KYP+A PEDYD
Sbjct: 186 KYPYATPEDYD 189

[Close]

BLAST of Sed0009759 vs. ExPASy Swiss-Prot
Match: Q10W93 (NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ndhL PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.6e-07
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 98  ILIQAAIVAFFYFLVFPPIIMNWLRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFR 157
           ILI  A +A  YFLV P I+  +L+ RWY  + +E  F +  +FLFFPG+L+ +PFLNFR
Sbjct: 11  ILIIYAALAGAYFLVMPAIVYAYLKTRWYVVSSIERVFMYFLMFLFFPGMLVLSPFLNFR 70

[Close]

BLAST of Sed0009759 vs. ExPASy Swiss-Prot
Match: Q8DKZ3 (NAD(P)H-quinone oxidoreductase subunit L OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=ndhL PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.2e-06
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 105 VAFFYFLVFPPIIMNWLRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPR 162
           +A  Y LV P I+  +L  RWY  +  E  F +  V  FFPG+LL APF+NFR  PR
Sbjct: 16  LAGLYLLVVPAIVYAYLNARWYVASSFERAFMYFLVTFFFPGLLLLAPFINFRPQPR 72

[Close]

BLAST of Sed0009759 vs. ExPASy Swiss-Prot
Match: B0C6G0 (NAD(P)H-quinone oxidoreductase subunit L OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=ndhL PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.8e-06
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 109 YFLVFPPIIMNWLRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPR 162
           Y LV P I   +L+ RWY  + LE  F +  VF FFP +LL +PFLNFR  PR
Sbjct: 15  YLLVMPAITYFYLQKRWYVASSLERGFMYFLVFFFFPSLLLLSPFLNFRPQPR 67

[Close]

BLAST of Sed0009759 vs. ExPASy Swiss-Prot
Match: Q8YMW5 (NAD(P)H-quinone oxidoreductase subunit L OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=ndhL PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.9e-06
Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 109 YFLVFPPIIMNWLRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPR 162
           Y LV P  ++ +L++RWY  + +E  F +  VFLFFPG+L+ +PF+N R  PR
Sbjct: 14  YLLVVPVALLFYLKLRWYVVSSIERTFMYFLVFLFFPGLLVLSPFVNLRPRPR 66

[Close]

BLAST of Sed0009759 vs. ExPASy TrEMBL
Match: A0A6J1GNR4 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456098 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 157/195 (80.51%), Postives = 167/195 (85.64%), Query Frame = 0


Query: 1   MNFSLGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNPIKNFQVVACIKQDPIGFF 60
           MN SLGLHIPKALPS LSSS +I P LS+ FKLLK PSN   I +FQVVACI++DPIGF 
Sbjct: 1   MNCSLGLHIPKALPS-LSSSKTISPFLSAPFKLLKLPSNPTSI-SFQVVACIREDPIGFL 60

Query: 61  HQNKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNW 120
            Q KTSL+LQ AALLATV EPA  VTG+NNHEV LTWIL Q  IV FFYFLVFPPIIMNW
Sbjct: 61  RQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMNW 120

Query: 121 LRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKN 180
           LRIRWYRRNLLEMY QF+CVFL FPGILLWAPFLNFRK PRDP+MKYPWSTPQ+PSQIKN
Sbjct: 121 LRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKN 180

Query: 181 AYFKYPFAKPEDYDW 196
            Y KYPFAKPEDYDW
Sbjct: 181 GYLKYPFAKPEDYDW 193

[Close]

BLAST of Sed0009759 vs. ExPASy TrEMBL
Match: A0A6J1GQ77 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456098 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.7e-81
Identity = 155/195 (79.49%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MNFSLGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNPIKNFQVVACIKQDPIGFF 60
           MN SLGLHIPKALPS LSSS +I P LS+ FKLLK PSN   I    VVACI++DPIGF 
Sbjct: 1   MNCSLGLHIPKALPS-LSSSKTISPFLSAPFKLLKLPSNPTSI---SVVACIREDPIGFL 60

Query: 61  HQNKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNW 120
            Q KTSL+LQ AALLATV EPA  VTG+NNHEV LTWIL Q  IV FFYFLVFPPIIMNW
Sbjct: 61  RQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMNW 120

Query: 121 LRIRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKN 180
           LRIRWYRRNLLEMY QF+CVFL FPGILLWAPFLNFRK PRDP+MKYPWSTPQ+PSQIKN
Sbjct: 121 LRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKN 180

Query: 181 AYFKYPFAKPEDYDW 196
            Y KYPFAKPEDYDW
Sbjct: 181 GYLKYPFAKPEDYDW 191

[Close]

BLAST of Sed0009759 vs. ExPASy TrEMBL
Match: A0A0A0KSV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569340 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.3e-80
Identity = 153/193 (79.27%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 7   LHIPKALPSLLSSSNSIFPSLSSTFKLLKF---PSNSNPIKNFQVVACIK-QDPIGFFHQ 66
           LHIPKALPS LSSS ++FPSL S FKL  F   PSNSNP KNF++V  IK +DPIG+ H+
Sbjct: 11  LHIPKALPS-LSSSKTLFPSLYSPFKLHNFNILPSNSNP-KNFKIVGSIKEEDPIGYLHK 70

Query: 67  NKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNWLR 126
            KTSLAL LAA LATVGEPA  VTGENNHEV LTW+L Q  ++ FFYFLVFPPIIMNWLR
Sbjct: 71  KKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPIIMNWLR 130

Query: 127 IRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKNAY 186
           IRWYRRNLLEMY QF+CVFLFFPGILLWAPFLNFRK PRDP+MKYPWSTPQDPS+IKNAY
Sbjct: 131 IRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSKIKNAY 190

Query: 187 FKYPFAKPEDYDW 196
            KYPFAKPEDYDW
Sbjct: 191 LKYPFAKPEDYDW 201

[Close]

BLAST of Sed0009759 vs. ExPASy TrEMBL
Match: A0A6J1DZB7 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025670 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.3e-80
Identity = 150/192 (78.12%), Postives = 165/192 (85.94%), Query Frame = 0


Query: 5   LGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNP-IKNFQVVACIKQDPIGFFHQN 64
           LGLHIP+ALPS LSSS S+FPSLSS  KL K PSNS P  KNFQ VA I +DPI   HQ 
Sbjct: 9   LGLHIPRALPS-LSSSQSLFPSLSSISKLQKLPSNSTPNNKNFQAVASISEDPIANVHQK 68

Query: 65  KTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNWLRI 124
           K SLA Q+AALLAT+GEPA  VTG+NNHEV L+WIL Q  IV FFYFLVFPPIIMNWLRI
Sbjct: 69  KPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRI 128

Query: 125 RWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKNAYF 184
           RWYRRNLLEMY QF+CVFLFFPGIL+WAPFLNFRK+PRDP++KYPW+TP+DPSQ+KNAY 
Sbjct: 129 RWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYL 188

Query: 185 KYPFAKPEDYDW 196
           KYPFAKPEDYDW
Sbjct: 189 KYPFAKPEDYDW 199

[Close]

BLAST of Sed0009759 vs. ExPASy TrEMBL
Match: A0A5D3E3M5 (NAD(P)H-quinone oxidoreductase subunit L OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00350 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 9.7e-80
Identity = 154/193 (79.79%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 7   LHIPKALPSLLSSSNSIFPSLSSTFKLLK---FPSNSNPIKNFQVVACIK-QDPIGFFHQ 66
           LHIPKALPS LSSS ++FPSLSS FKL      PSNSNP KNF++V  IK +DPIG+  +
Sbjct: 9   LHIPKALPS-LSSSKTLFPSLSSPFKLHNLNILPSNSNP-KNFEIVGSIKEEDPIGYLDK 68

Query: 67  NKTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNWLR 126
            KTSLALQLAA LATVGEPA  VTG+NNHEV LTW+L Q   V FFYFLVFPPIIMNWLR
Sbjct: 69  KKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMNWLR 128

Query: 127 IRWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKNAY 186
           IRWYRRNLLEMY QF+CVFLFFPGILLWAPFLNFRK PRDP+MKYPWSTPQDPSQIKNAY
Sbjct: 129 IRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIKNAY 188

Query: 187 FKYPFAKPEDYDW 196
            KYPFAKPEDYDW
Sbjct: 189 LKYPFAKPEDYDW 199

[Close]

BLAST of Sed0009759 vs. TAIR 10
Match: AT1G70760.1 (inorganic carbon transport protein-related )

HSP 1 Score: 189.1 bits (479), Expect = 3.3e-48
Identity = 98/191 (51.31%), Postives = 122/191 (63.87%), Query Frame = 0


Query: 4   SLGLHIPKALPSLLSSSNSIFPSLSSTFKLLKFPSNSNPIKNFQVVACIKQDPIGFFHQN 63
           SLGL+ P ALPSL     S+      T       +  + +   +  AC   D +G     
Sbjct: 6   SLGLYAPNALPSLSLKPRSVKSPFCITSHTKPNDTLLHNVNKMRAKAC---DILG---AK 65

Query: 64  KTSLALQLAALLATVGEPAFGVTGENNHEVQLTWILIQAAIVAFFYFLVFPPIIMNWLRI 123
           KT LA QL A+LAT+  PA  +TG NN + +L+ +++   I++ +YFLV PPIIMNWLR+
Sbjct: 66  KTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGIISVWYFLVMPPIIMNWLRV 125

Query: 124 RWYRRNLLEMYFQFLCVFLFFPGILLWAPFLNFRKMPRDPTMKYPWSTPQDPSQIKNAYF 183
           RWYRR   EMY QF+ VF+FFPG+LLWAPFLNFRK PRDP MK PW  P DP  IKN Y 
Sbjct: 126 RWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNMKNPWDKPTDPDSIKNVYL 185

Query: 184 KYPFAKPEDYD 195
           KYP+A PEDYD
Sbjct: 186 KYPYATPEDYD 189

The following BLAST results are available for this feature:

BLAST of Sed0009759 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875378.1	2.1e-84	81.73	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida]	[more]
KAG6601873.1	1.1e-82	81.03	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, partial [Cucurbita argy...	[more]
XP_022953622.1	4.3e-82	80.51	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita mo...	[more]
XP_022953630.1	1.8e-80	79.49	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 [Cucurbita mo...	[more]
XP_023527074.1	4.0e-80	79.49	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita pe...	[more]

BLAST of Sed0009759 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAC5	4.7e-47	51.31	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q10W93	3.6e-07	50.00	NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS...	[more]
Q8DKZ3	5.2e-06	47.37	NAD(P)H-quinone oxidoreductase subunit L OS=Thermosynechococcus elongatus (strai...	[more]
B0C6G0	6.8e-06	50.94	NAD(P)H-quinone oxidoreductase subunit L OS=Acaryochloris marina (strain MBIC 11...	[more]
Q8YMW5	8.9e-06	45.28	NAD(P)H-quinone oxidoreductase subunit L OS=Nostoc sp. (strain PCC 7120 / SAG 25...	[more]

BLAST of Sed0009759 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNR4	2.1e-82	80.51	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita ...	[more]
A0A6J1GQ77	8.7e-81	79.49	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Cucurbita ...	[more]
A0A0A0KSV9	3.3e-80	79.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569340 PE=4 SV=1	[more]
A0A6J1DZB7	4.3e-80	78.13	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Momordica ...	[more]
A0A5D3E3M5	9.7e-80	79.79	NAD(P)H-quinone oxidoreductase subunit L OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Sed0009759 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70760.1	3.3e-48	51.31	inorganic carbon transport protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019654	NAD(P)H-quinone oxidoreductase subunit L	PFAM	PF10716	NdhL	coord: 87..160 e-value: 2.3E-29 score: 101.2
None	No IPR available	PANTHER	PTHR36727	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT L, CHLOROPLASTIC	coord: 1..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009759.1	Sed0009759.1	mRNA
Sed0009759.2	Sed0009759.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding