Sed0009742 (gene) Chayote v1

Overview


Name	Sed0009742
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Cleavage and polyadenylation specificity factor subunit 2
Location	LG07: 7420038 .. 7432061 (-)
RNA-Seq Expression	Sed0009742
Synteny	Sed0009742

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAGAGAAAAAAGAAAAAGAAAAAGAAAAAAATCTCTGCCCCGCCAATTCCCCTAAAACCTTGTTTCTCTTCCACAACGAGGGAGTTGCAGAGAGCTGAGCAATGGGAACTTCCGTTCAGGTGACGCCTCTTTGCGGGGTCTTCAATGAAAATCCTTTATCATATCTGGTCTCTGTCGACGGCTTCAACTTCCTTATCGACTGTGGCTGGAACGACCACTTCGACCCTGCTCTTCTTCAACCTCTCTCCAGGTTCGCTTTATCGCATTTTGTTTTCTTTGAGCTTAATTTGTAACTCCCCTGTATGCAACATCGAATTCCATGTGTTTGGCGATTGATTGCTGATACCTAGCTGTTTTTGCTTGTTCTGAAATGTGTTAGGTTAATTAGGGAATCAGTGGAATGGTTTATTAGAAGATCTGATTTCTTTTGAACTGAACGGGTTTTCGGAATAATAAGGAACAAAAGACCCATGGGTTTTGTTGGCATCCAAATGTTGTAGTTTAGACGATATATTTGTATAGTAGTTGGGATGTGTACAAATTGGCTCGGACAGTTAGAAATATTAAAAAAACGAAAGGAAAAAAAAGGCATCCTGGCCTGGTAGTTTAGGACTCAAGAGGGCCTTAGCAAATTATATGTTATGGGTTTGAGTCCCCAAGGAGTGACACTAGTGGTTGAAGGCTTGAGATTTGAAGGTGTGCTCCTCTCAAAGTCCCAGATTTAAAACTCATCTGTGACATTAATTTGTAGACATCTCCTGCATCTCCATTCCTTCGATGTCTCCTGGTGTCTGACATAGGGACAGGCGTGGCTACCTCGAGTATAGTATAATGGAGCGAAACTTTGATTTCCCGATTTCATAAAAAAAAAAAATTCAAAAGGTTATAGATTTAATCTATAGTGGCTATTTACCTAAGAGCTAATTTGTTACCGGTTTCTTTGACAACTAAATACTGTAGGGTCGAGTCTATTTAAAAAATGGATTCTCAGAGCGGGGCTGCAAACAGTTGATTTTTGTTTATTTCATGGCCTTAATACGTAGTTGTGGCATTTCAGGGTGGCATCGACGATTGATGCAGTATTGATATCACATCCTGACACACTTCACCTTGGTGCTCTTCCTTATGCCATGAAACAGCTTGGACTTTCTGCTCCAATTTATTCCACTGAACCTGTATTTCGATTGGGCTATCTTACAATGTATGATCAGTTTTTCGCCAGGAAGGTAAAAGTTTTTTGTTTTTTGCTAATGTATTTTGGTTCTTTAATGTTATGTTTTTAATTGATCCAATCAAAACAAGCTACTACACTATTTACCTGGAATTTTAAAAAGGGATTTGCCTTCAAGTTTGGAGTGGAATGAAACATATCTGCTAAGCTATTGCTGAGATTTCATACTGGCCACAGTTATGAGTAATCACTAACTTGATTCCTTGTTGGTGCCTTTTACTATCGTTTCGCCAACAACAAAATAACTCAATTGGCATAAAATGGATACTTATGGCCTAGAGGTCATGAGTTCGAATCTCCAAATTGTTGTTGAACTGAAAAAAATTTCAATAGCTTTCAGTTTTGATTTTGGGCTCTCCTAACTCTTTTTTCTGGGTGTTGCCTTATGAACATGCCCCTGTTCTCCTCTGCAGCAAGTATCGGAGTTTGATCTATTTACACTGGATGATATCGATTCAGCTTTCCTAACTATAACCAGACTAACTTACTCCCAGAATCATCATCTTTCAGGTGGTTATTCTTTGTCTTGTTTATTTTAGATCAAAGTTTATTGATCTCTTTCTATCTCGGTTGCTTAATGATGGCATATCATGTATGATGCTATGTTTTTATTACAAAAGCTTATAAAAGGAATAGAAAACCCAAAGATCATCTTCCTAATTATTCGATGTCTTAAAAGGAAAGAAAGTTCAGAAGCACATATGTCCATACCCGGGTATGTTTAAGTGTTTGAGCATACTAAAAAGAAAAGCCCTAAAAAAGCGGAGTCCTATCTAAAACATGGTCTCCAATCAAGCAAAATCGACATGGTCACAGACTCACATGAGAAACATTACAAAAATTTGTAGAAATGGGAGCTCAAAGAGAAATATAGAATCTAATAAGGTCACAAATATCTTGAATCGATCTTTCCACTCTAAAAATTCTATTGTTTTTCTTCCTCCAAAGTCTCCACAAAATGGTACACACTCTAGCATGTTACAAAAAACCCCTTTTTCATGAAAGGGAGGGAACTAAGTAGTTTCACCAACATGTCTCTAAAATTGAACCTGTTTATACTATGATTGAAATTTAAAAAATGTATATAATAAAAAATTTAGCAATTAAGTTTGAATTCCAATTGTGTTCGACTGTTGGGTATGCAGTTTATATTAAACATGGCCTGTTGAAATTTGTTTGATGAAGAAACGAGCTTTCATATAGAGTAAGTGAAAGAGCACTTGAGGGTAGTAAAAAAAGAGGTGGAAGACCTCGATACAAAAGGAGCCAAAAACAAAAGGCTAACAAAAACTTCAAAGCTACTAAAAGAGGCTCCAACTGTCCCCAAAGGGTGGCGCGGTGGTCGAAGGCCTGGATTTTGAAGGTGTGCTCCTCTCGAGGTCCCAGGTTTGAGACTCACTTGTGTCATTAATTTGTAGACACCTCCCGTGTCTCCATTCCTTTGTTCTCTCCCAGTGCCTGACCTTTGGACGAACGTGGTTACCTTGGGTATAGTGGAGCGAAGCTCCATTTACTGGTTTTTTTAAAAAAGAAGAGGCTCCAATTAAAAAATTAAATATTCATATTTTAAAAAAATTTAGATGAGACAGAGCTTTCATTAAGAACAATAAAGAGTATGGAGCAAGCAAGAAATCCTAACAAAGGAAGGGCTAATATTTGATGACAGGCAAAGGAGAAGGAATAGTTATTGCGCCTCACGTGGCTGGGCATCTATTAGGGGGAACCCTATGGAAGATAACCAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGTATGTTAACTGTTGTTACAAACACAGTCGCTTGCGTTAAGATTACTCAAAACCAAAATAAAAATCACAATTCTTATTTAACTTACTGTCAGGCATTTGAATGGAACCATTCTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAGCCTTACAGACGCCAAAAGGACAAAGAATTTGGAGGTAATTAAAATCATATTTAGGGTTAAAATTTTAAAATGCATCAGCAAGACATTCCATCTTTTGCCTCGTTCTCTTCCTCTATGTCTTGCTTTTAGCAAAAGAGCATATTCATGCCGAAGTTCTATGTTAAGGATGTTTAGTTGTTTTTTTTCCTAGAGTTTAGTTATGAAAGTTACCTTTATGATTGATATAGATACTATTCAGAAGACCTTGAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTGGAATGGGTTAGTTGGAGGAGGATAAAACCCCTATTGTTTTATTTATTTATTATTATTATTTCAAGTTTCAGTTGCATTAATTAAGAAGTAATATGAACGGGCTCATTGTTAAATAATTGTTGTTATTGCAGTACTGGGAAGAGGAAAGTTTAAATTATCCCATCTACTTTTTAACTTACGTTGCATCTAGCACAATTGAGTATATCAAGAGTTTCCTAGAGTGGATGAGTGATACAATTGCCAAGTCTTTTGAACACACACGGAACAATGCCTTTCTTCTCAAGTAAGTGTTCTTCCAAGTATTATATTTTTTTTTCTCTTTGGATAAAAAACTGAAAATTCATTTAAAAAGACAGGAGTGCAGAAAAAAGGTGGTAGTTGCCAGTAAATCCCGTTGCCTTGATGGTTCAAGCCTTACATATTTTATATTTGATAACATGCTCTAGTTACCTTTGATTTTGGAAATTGAGATTAGACTAAAATAAATTTTAATGTAGAAGAGCCTTTGTGAAGTGATATGAATGGAACTAAGAAGTCTTACAAGGCTGTTCAAAATCTTGCAGGCATGTTACCCTTCTAAGCAAAAAGAGTGAACTTGATAATACTCCAGAGGGTCCGAAGGTTTATTGCAACAAGTTGTTGATTTTGTCAATGTTTACCTCCTTTTTCTTGAGGTTTAAATGAATTGACTTTAATATCATGTCTCTTGCAGGTTGTTCTAGCATCAATGGCTAGTTTAGAAGCTGGTTACTCACATGACATTTTTGTTGAATGGGCATCTGATGCTAAAAACCTCATGCTTTTTTCTGAGAGAGGCCAGGTATTTCTTCAGCAAGTTGTTCGCCTCCAGACATTTCTAGTGATTTTTCATGTTTCAGTTTTCTATTTTTCTCCAGTCCTAGGAACTCATTAGCTGTTTTGCACAATTTATTTGCCATACTTACAAAAATGCTATTTTATCTTTACTTCTTTTTTTAAACATCTTCTATAGATTACTACATAGGTTTCTTTCCTTGAAGATAAATAGACGTTTTATCTTATTCAAAGTTTCCCTCCTTATTGTTATAGGAAAAACTACATTTTATGCTTAATTCCTTTTCACCTTACTTTCTAGTGGACGGTTTTTCTGGCAATAGTCAGTGACTCGATGGCAATTGATTTCCAGTATAGTCTAGTGCCATGGCGTGTCTTGGAAAGTGTGTGTGTGTATTTATATATTCTCCTTTCTTTCCCCTTTGCATCCACTAGCATATTAAACTGCATGCTTCTTTGGACTCTTAAAATCTACATTATATTGTGAATGTGCAAGTGTAACCCCCTTCAGTTGGAAAATGCAGTTTAGTACTTTGGCTCGCATGCTTCAAGCAGATCCACCTCCGAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTTCCTTTGACTGGAGATGAGCTTATTGCTTATGAAGAAGAGCAGAACAAGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTTAAGGAGGAACAATCCAGAGCATCTCATGGAAATGACAATGATACTGGTGATCCAATGATCGTTGATGCTAGCAGTAATGTTCCACCAGATGGTATGATGACCAATAACTGCTGTTTCTTATACATGTGCAAACTTTTTTCAGTAAGGAAATTATGAGCATCCAAACTATCTACTTGAATTGGCAAATATATTTTATGTGAAAATGAGAGTTGGTTATTTTAATATTTAATAAAATGTTCCGGGCAACTCTCCGGGTGATATTTGGTCTCCATTAGGAATTATAAGAATATAATTCTTAGATTTATGTAATTTGAAGTATTTAAACGTTGCTAGATATGCTCTAGAATATTTTAGAGATTTGTTAGATATTCTTTAAGATTTGTTAGAAGATCCTCCAGGGTTTTATATTTTGTGTATTATGTATATATGGATAAAATAAATGGAAATGTAGAAGGTTTTCTCCTCAATTTCTATGAGTTTAACAGTCCCATGTTAGATTCAATATTTCTCTAGCCTTGGTGATTAAGTACTTAAGTAATTATTCGTTAGTTCAGATCGTGTTTGATTGAAAGCCATTGGTGTATGCTTCTTCCTCTTCCTTTTTTGCAGGCTCTTGTTTTATATGCCCTTTTATTCTTTTATTTCTATCTCAATGAAAGCTCGGTATTATTATTTTATATATATATAAAAAACTTCTACACACTAACAAGGGTCATTTGATGTGTCAGATCTTTGCTTTGACTAACATAATGTCATGATCGAAATCGTTTAAACATATGTTTTAAGAATTTTTAATGGAATTGATTGGTTGTCCAATTGCATCTTGCAGTTGGCGGTTCACAGGGAGGTGCATACCGAGACATATTGATTGATGGTTTTGTTCCTCCTTCAACAAGCGTTGCTCCAATGTTTCCCTTTTATGAAAACACTTCCGAGTGGGATGATTTTGGTGAAGTAATTAATCCTGATGATTATGTAATTAAGGACGAAGACATGGACCAAGGAGTGATTCAGGTAAGATTCTTTGATATAATTAACTGCGTTTTATTCTGGACTGGTAAGATTCAATTAAAATGGAATGATAAGTTGGTTAATAGGTTGTGGGTTGATGTAAAGTCTTTCTTGTAGTGAAGTTTAGGAAACCAATTTGTTTTGTTCTGTTCTGTTCTGTTCTGTTCGAGAAAGACATCATTTTGCTAATTAATAAACATTTGAAATCTAATATCCTGTTTTGTTTGGTTTTGGTTTTGAGATTAAGATCCCCCCTCCCCCTCTTTTGGTTGGTGAGAAGCAAGTTTTCTTTTGGGTTTTGAGATTTTTGTTGTAGTTAATATTAATGAGAAACAAACATTTGTTGAGGTAACAGCAAAATAAGGGCCAGACAAAAAGAGAGGCATGCCAATAACAAAGGGCCAGCAAAAGACAGATGCAAATATAAAATTTAAAAACATAATTGTTGGTGATTCAAAAATGGGAAAACCACTGAACAATTTTTTTTTAAAAAAACCAGGAAATCATAGCTTCGCTCCACTATAGTAACCACGTCTGTCCCTAGGCTAGGCATCGGAAGACATTAAAGGAATGGAGACACGAGAGGTGTCTAAAAATTAATGTTATAGGTGAGTCTCGAACATGAAACCTTGAGGGAATACACCTTCAAATCCCAAGCCTTCGACCACAACACCATCCTTTGGGGACAAAAAAAAAACCACGGAACACACTGCAACTAGAAACCTTAATGCATGCAGGTAAAGAATCACCGTTCTCCATAGTTGAAAATGACTTTCTAAATAAAATACATTGGCATCAAAAGGAGCCAAAGGAAGTAGAGATTCATTGACATCATATATGATCTAGTAATCAAGAGTTTACTAGTTCGAACCCCCCACCTCCAATTGTTATTGAATTAAAAAAAAAGACCAAAGAAGGAAGCTGAGTTAACCATCATGAAGCCTAATGGTCTAAAGTGTCATATGTAACTAAGAGGTGATGGGTTCATTCCATGGTGGCCACCTACCTAGGAAATAATTTCATATGGGTTTCTTTGACATCCAAATATTGTAGGGTCTAACGGTATGTCCTGTGAAAATAGTCGAGGTGCATGTAAGCTGGCTCTGACACTTACGGATATAAAAAAAAAGGAAGTTGAGTTCATTAATAAGTTTTAAGAATCTAGAGATAATTATAAAATCTTGTACAAGTATGACTTTTTTTGGGGGATAGAAAACAAACCATTTCATTGATAAAATGAAAAGATACAAATTGCCTATCGAAACGATGACAAACCAAAAACCAAAAGGGCATTACAAGATAATAACCAAACACCATACTTAGAAGCCCACTTATAGAGAGGAAAAAGAAAACCATTTGAGACAAAAAAAAAAAAAAGCAAACAAAATCCTTGTCAGTAGAGATTAGACTCAAACACCATCCTTCAGCATCAAACGGTGGAAGGCTTTGATAGGGATCATCATGTAATACAACGAGCCACGCCAAAGCCTTTAAATAGACATCCTTAAGAGCTCATTTTTTTGAAGTGGAGCCTAACCTTTTTAGAGTTTGTGGATTTGGTGTTGTATTGTACAGTGGTGCATATATTTATGAGTTCCCTAGATCCTTTAAGCATTTTCTTCACCAAGGATGACTAGTGAAAAGAATATGTAATTTAAAGATGGCAAGATAATTTTGAGAATTTATGATCTAGTTTATTGCATAATATTAACTGTCTTCTGTTCTATATTGTTATCAATTTCTTAAGAGAAGGAAACTAAAATTTTGATATTAGAATTCTCAAAGAATGAATATTGTAAATATAGAAACTTCATTTCAGTTTCTTCAGATCATTTAGCTTTAAAATCAGGCTTCGATTAGTTATCGTTCTGAAAACAAAATACTTCGGTTAAATTCACTGGAAACGGCCGTGTAAAGATCAAAATCAGCATCCATGTAGCCAATCTATATAGCTGGGACTGTCAGGAGAACACAGTTAAATGGACTTGAATTTTGTCCTTTGTCATTGTGGATGAATTGCTAATTTACTAAGTATCTAACTTGCAGGCTGTTGGAGACGCGGATGGAAAACTAGATGAAACTGCTGCAAACTTGATTCTTGATATTAAGCCTTCGAAAGTTGTTTCTAATGAATTGACGGTAAGTTGATCTCTAGTTAAAGTTGTGTAAGGTACTGGTTGACTGAAGTCACATGAATGTGCATTTAATGTTATGGTCACCAAAATATATAATATTCACATATAAAATTTCTTTTATGTAAAATCTTTTACTTAATAGGAGAAGTTGCTTTGTATAGCTATGCTTTCGTCCCCAAGGGGTGGTGTAGTGGTTGAAGACTTGGGCTTTGAAGGTATGCTTCCCTCAAGGTCTCAGGTTCGAGACTCACATGTGACATTTATTTATAGACATCTCCCGTGTCTCCATTCCTTTGATGTCTTTTGATGCTTGGCCTCGGGATGTGTGGTTACTAGGGGTGTACATGATCCGGGTTGGGTAGGGTTGGATGATTTTTTTGGACCAACCCCATTATTCGGGTTGGTTGTTTCGACGACCTGTCCAACCCTATGCACAAGCGCAACCCAAACCAACCCAACCCTAGATTTTCGGGTTGGGTTGGGTTGGGTTCTCGGGTTATGTTACTCATCATTTTATCTCTAAGATTCAACTTATAAGTTTATAAATATGTTAAAAAAATGCATGATATTATACTTTACATAAATGCACATGTGTTTGTTAGAACAAGTGTACCATTATATTTTTCAAATAAGAAATAAATGATATCATTTAAGAACAAAATTAGAGAGCATAAGAAAATATGAGAAATCTTCCCAAACTAACGACCAGTAAAGATTAGAAAAAAAACTATCAATTCCAACTAATGTTAAAGGAATGCAATTGCAATTACATTTAAATAGGAAGTTTAGGAATAAGAAACAAAGCAACTTAATTCTAGAGCTACTAAGCTAGATTTACAAGTATACTATCTATCTTATTAATTTATCTTACATACACACATAATATATATATATACACACATAATATATATATATATATATATATATATATATATATAATATTCTTAGTTCGGGTTGGGTTGGGTTGAACTAGCCCAACCCAACCCAACAAAAACTATAAAATCATAACCCAACCCAACCCAAAAAAATTAGAGTAAAACTCCCCTACATTTTATCCATGTGGCACCATTAAATGCCACAAATTTTTTTTTTATAAATAAAAATATTAAAAAGGAGTGAAGTTTTTGTGGCTTTCAATAGTACGCATGGATAAAATGTAGGACTCCCCTACACATGCATGTGTAGGGAAGTTTTACTCAATAAATTATAACCCAACCCAACCCTTACGGTTTGGGTTGGGTAGTCCGGGTTGTTCGGGTTACCGGTTTTTTTGTACACCCCTAGTGGCTACCCTGGTTTAAAAAAAAAAGTTATGCTTTCATGTTAACTAATTGGGAAAGCTTTTTGTAGTCATCATGGATTAACCATCATTTTTGCAAATTTCTTTCATCAATGAAATTGTTTCTTAAGAAAAAAAGAGATAAGGAGAGAGAAGATTATAATGAGTTGATAGAAACTTTTTCTGATTTGTTTCTCTAAATACATATATATTTCTGTTCCATAACCTTTTCTTCCAAGTGCTCAATTTTATACTTTGCAATGATCATCTTTGTTCTTATGTTCAACTTCACGATACACAATCAAGTTATTTATCTATTGACCGAAGTAAAAAATGTTTCTGTAATTTCTCTATCCAGGTTCAAGTTAAATGTTCATTGCATTACATGGATTTCGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCCTTGAAGCTTGTATGACGTTTTCTTACTACTCTTATCGGGTTATTGTCTGTACATAAGCTTGTGAACTTGGACCTATAGAGATCGTAGGAAGAGAGTTCAGTTTAACTAAGCTGTATTCTGAGAAATATACTGTGTGATATTGGATTTTGAATTTTCAAATCTTGTGTACTTGCAATATTTTTGTTGTTTCACTGAGCATTGTTCAGTCTTGCCCCAACTCTTATCAACGATTCAACGGTTTTTTCATGAATTTATTTAAATGGTCGTTTGAAGGTTTTGGTGCATGGAACTGCTGAGGCCACTGAGCATCTTAAACAACATTGCCTCAAAAACGTCTGCCCCCATGTCTTCGCCCCCCAAATTGAAGAAACAATTGATGTTACTTCTGATCTGTGTGCATATAAGGTACAGTCTAGTCTCTTCATTTCCTTTTCAGGTTGTTATTTCATATATGGCTAACAAATCGCCAATTCTCAAATTTCAGGTACAACTTTCAGAGAAACTGATGAGTAATGTGCTGTTTAAGAAGGTAAAGATTTGGACATCCATGCAACTTTCCTTTCAAAATTAGCTTGTACTTTACATCTGTGTAACCAATCTTCCTTATGATGTCTGACATCATTTCAAGTACAGCTGGGTGATTATGAAATCGCTTGGCTTGATGCTGAAGTTGGGAAGACCGAGAATGGACCGTTGTCGTTACTTCCCCTATCAAAGCCTGCTTTGCCTCATAAATCTGTCCTTGTCGGCGATTTAAAAATGGCCGACTTCAAACAGTTTCTTGCCAGCAAGGGAATACAGGTATCTTTGCTTATGGGCTCTTGAAGGGAATAACTGCCCCCTTTTTGACATTTATAGACACTAAATCTGCGGCTGAGCAAGTAAGAAAAATGAACTATTTGTCCCCAAGGGATTGGGCTTTGAGGGTGTGCTCCCCTCAAGGTCCTGAGTTCGAAATTCACTTGTAGCATTCCTTCGATGTCTCCAGTGCCTGGCTTAAGGATGGGCGTGGTTACCTCATTTCAAAAAAAAAAAAGAACAATGAACTATATGGTCGTCCTATGTGCATTGCAGGTGGAATTTGCTGGAGGTGCTTTGAGATGCGGCGAATATGTCACACTACGCAAGGTTGCAGATGCAAGTCAGAAGGTGAGGAATTCTGAAAAAAGGGGGAAAATAGATACATATAAATTTAGTTTATTTATACATGTTTAGTCCATCATGTTTCTGGTTAGGTTTCTAAACTTCAAAAAGTATCTAGCAAGTCCCTAAACTTACAATGATGTCTCATGGGTCCTAAAAGTTTAAAACTGCCCATTAAAACTCACCATATTTGTAGAACTAAGAGATGAAAAGTTCAATCCATCGTGGCTTATCTAAGAATTAATTTCCTATAGATTTCTTTGACATTCAAATGTTGTAGGATTAGATGGTATGTCTCGTGACAATAGTCGAGGTGCGCACACGTTGGCCTAGATAGTCACAGATATAAAAATAAAAAACACCATACTTTCAATTTTGGGTTATTTGATTCTATTAGATATGAAATTGTATTTGGTGTCTAATTTTTTATTCTATTAGACATAAAATTGTATTGGGTGTCTAATATATCGACACCTTTTACAGTTCAAAGACCTATTAAAATAAAATTAAAAGGGTAGAATTTTATTAATTATTTTTTAAGTTAAGAGATCTATTTGGCGTTCGAGTAAAGGAGAGATGGTTGGCATCTCCCCCGACAGGATCGGGAACAGCCTTCGGGCTTGTGTTATCACATCCGACAACATTAAGATATCTATTTGACTCGAATCCGAAAATTTTGAAGTTGAACTTATAATTGTAGACTTATAATGGTGTTATTTGGCTTATACTATTTATGCAGGCTGGGGGTTCTAGTACTCAGCAAGTCGTCATCGAAGGGCCTTTATGTGGGGATTATTATAAAATTCGGGAACTTTTGTATTCACAATTTTATTTGCTATAGTTGAGAATGTGATTTATTGGGATTCAGCAGCTAAGAATGTGAACTGCTAAGTCCAAAATGTATCCATTTGGTTTTGTTTCTCAAATTTGTTTTTGTACTATGTTTTATTAATTGATTTTGAGATAAAATTAATTAAATTCAAATGAGTTTTTCTGA

mRNA sequence

AGAAAAGAGAAAAAAGAAAAAGAAAAAGAAAAAAATCTCTGCCCCGCCAATTCCCCTAAAACCTTGTTTCTCTTCCACAACGAGGGAGTTGCAGAGAGCTGAGCAATGGGAACTTCCGTTCAGGTGACGCCTCTTTGCGGGGTCTTCAATGAAAATCCTTTATCATATCTGGTCTCTGTCGACGGCTTCAACTTCCTTATCGACTGTGGCTGGAACGACCACTTCGACCCTGCTCTTCTTCAACCTCTCTCCAGGGTGGCATCGACGATTGATGCAGTATTGATATCACATCCTGACACACTTCACCTTGGTGCTCTTCCTTATGCCATGAAACAGCTTGGACTTTCTGCTCCAATTTATTCCACTGAACCTGTATTTCGATTGGGCTATCTTACAATGTATGATCAGTTTTTCGCCAGGAAGCAAGTATCGGAGTTTGATCTATTTACACTGGATGATATCGATTCAGCTTTCCTAACTATAACCAGACTAACTTACTCCCAGAATCATCATCTTTCAGGCAAAGGAGAAGGAATAGTTATTGCGCCTCACGTGGCTGGGCATCTATTAGGGGGAACCCTATGGAAGATAACCAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGCATTTGAATGGAACCATTCTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAGCCTTACAGACGCCAAAAGGACAAAGAATTTGGAGATACTATTCAGAAGACCTTGAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTGGAATGGTACTGGGAAGAGGAAAGTTTAAATTATCCCATCTACTTTTTAACTTACGTTGCATCTAGCACAATTGAGTATATCAAGAGTTTCCTAGAGTGGATGAGTGATACAATTGCCAAGTCTTTTGAACACACACGGAACAATGCCTTTCTTCTCAAGCATGTTACCCTTCTAAGCAAAAAGAGTGAACTTGATAATACTCCAGAGGGTCCGAAGGTTGTTCTAGCATCAATGGCTAGTTTAGAAGCTGGTTACTCACATGACATTTTTGTTGAATGGGCATCTGATGCTAAAAACCTCATGCTTTTTTCTGAGAGAGGCCAGTTTAGTACTTTGGCTCGCATGCTTCAAGCAGATCCACCTCCGAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTTCCTTTGACTGGAGATGAGCTTATTGCTTATGAAGAAGAGCAGAACAAGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTTAAGGAGGAACAATCCAGAGCATCTCATGGAAATGACAATGATACTGGTGATCCAATGATCGTTGATGCTAGCAGTAATGTTCCACCAGATGTTGGCGGTTCACAGGGAGGTGCATACCGAGACATATTGATTGATGGTTTTGTTCCTCCTTCAACAAGCGTTGCTCCAATGTTTCCCTTTTATGAAAACACTTCCGAGTGGGATGATTTTGGTGAAGTAATTAATCCTGATGATTATGTAATTAAGGACGAAGACATGGACCAAGGAGTGATTCAGGCTGTTGGAGACGCGGATGGAAAACTAGATGAAACTGCTGCAAACTTGATTCTTGATATTAAGCCTTCGAAAGTTGTTTCTAATGAATTGACGGTTCAAGTTAAATGTTCATTGCATTACATGGATTTCGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCCTTGAAGCTTGTTTTGGTGCATGGAACTGCTGAGGCCACTGAGCATCTTAAACAACATTGCCTCAAAAACGTCTGCCCCCATGTCTTCGCCCCCCAAATTGAAGAAACAATTGATGTTACTTCTGATCTGTGTGCATATAAGGTACAACTTTCAGAGAAACTGATGAGTAATGTGCTGTTTAAGAAGCTGGGTGATTATGAAATCGCTTGGCTTGATGCTGAAGTTGGGAAGACCGAGAATGGACCGTTGTCGTTACTTCCCCTATCAAAGCCTGCTTTGCCTCATAAATCTGTCCTTGTCGGCGATTTAAAAATGGCCGACTTCAAACAGTTTCTTGCCAGCAAGGGAATACAGGTGGAATTTGCTGGAGGTGCTTTGAGATGCGGCGAATATGTCACACTACGCAAGGTTGCAGATGCAAGTCAGAAGGCTGGGGGTTCTAGTACTCAGCAAGTCGTCATCGAAGGGCCTTTATGTGGGGATTATTATAAAATTCGGGAACTTTTGTATTCACAATTTTATTTGCTATAGTTGAGAATGTGATTTATTGGGATTCAGCAGCTAAGAATGTGAACTGCTAAGTCCAAAATGTATCCATTTGGTTTTGTTTCTCAAATTTGTTTTTGTACTATGTTTTATTAATTGATTTTGAGATAAAATTAATTAAATTCAAATGAGTTTTTCTGA

Coding sequence (CDS)

ATGGGAACTTCCGTTCAGGTGACGCCTCTTTGCGGGGTCTTCAATGAAAATCCTTTATCATATCTGGTCTCTGTCGACGGCTTCAACTTCCTTATCGACTGTGGCTGGAACGACCACTTCGACCCTGCTCTTCTTCAACCTCTCTCCAGGGTGGCATCGACGATTGATGCAGTATTGATATCACATCCTGACACACTTCACCTTGGTGCTCTTCCTTATGCCATGAAACAGCTTGGACTTTCTGCTCCAATTTATTCCACTGAACCTGTATTTCGATTGGGCTATCTTACAATGTATGATCAGTTTTTCGCCAGGAAGCAAGTATCGGAGTTTGATCTATTTACACTGGATGATATCGATTCAGCTTTCCTAACTATAACCAGACTAACTTACTCCCAGAATCATCATCTTTCAGGCAAAGGAGAAGGAATAGTTATTGCGCCTCACGTGGCTGGGCATCTATTAGGGGGAACCCTATGGAAGATAACCAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGCATTTGAATGGAACCATTCTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAGCCTTACAGACGCCAAAAGGACAAAGAATTTGGAGATACTATTCAGAAGACCTTGAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTGGAATGGTACTGGGAAGAGGAAAGTTTAAATTATCCCATCTACTTTTTAACTTACGTTGCATCTAGCACAATTGAGTATATCAAGAGTTTCCTAGAGTGGATGAGTGATACAATTGCCAAGTCTTTTGAACACACACGGAACAATGCCTTTCTTCTCAAGCATGTTACCCTTCTAAGCAAAAAGAGTGAACTTGATAATACTCCAGAGGGTCCGAAGGTTGTTCTAGCATCAATGGCTAGTTTAGAAGCTGGTTACTCACATGACATTTTTGTTGAATGGGCATCTGATGCTAAAAACCTCATGCTTTTTTCTGAGAGAGGCCAGTTTAGTACTTTGGCTCGCATGCTTCAAGCAGATCCACCTCCGAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTTCCTTTGACTGGAGATGAGCTTATTGCTTATGAAGAAGAGCAGAACAAGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTTAAGGAGGAACAATCCAGAGCATCTCATGGAAATGACAATGATACTGGTGATCCAATGATCGTTGATGCTAGCAGTAATGTTCCACCAGATGTTGGCGGTTCACAGGGAGGTGCATACCGAGACATATTGATTGATGGTTTTGTTCCTCCTTCAACAAGCGTTGCTCCAATGTTTCCCTTTTATGAAAACACTTCCGAGTGGGATGATTTTGGTGAAGTAATTAATCCTGATGATTATGTAATTAAGGACGAAGACATGGACCAAGGAGTGATTCAGGCTGTTGGAGACGCGGATGGAAAACTAGATGAAACTGCTGCAAACTTGATTCTTGATATTAAGCCTTCGAAAGTTGTTTCTAATGAATTGACGGTTCAAGTTAAATGTTCATTGCATTACATGGATTTCGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCCTTGAAGCTTGTTTTGGTGCATGGAACTGCTGAGGCCACTGAGCATCTTAAACAACATTGCCTCAAAAACGTCTGCCCCCATGTCTTCGCCCCCCAAATTGAAGAAACAATTGATGTTACTTCTGATCTGTGTGCATATAAGGTACAACTTTCAGAGAAACTGATGAGTAATGTGCTGTTTAAGAAGCTGGGTGATTATGAAATCGCTTGGCTTGATGCTGAAGTTGGGAAGACCGAGAATGGACCGTTGTCGTTACTTCCCCTATCAAAGCCTGCTTTGCCTCATAAATCTGTCCTTGTCGGCGATTTAAAAATGGCCGACTTCAAACAGTTTCTTGCCAGCAAGGGAATACAGGTGGAATTTGCTGGAGGTGCTTTGAGATGCGGCGAATATGTCACACTACGCAAGGTTGCAGATGCAAGTCAGAAGGCTGGGGGTTCTAGTACTCAGCAAGTCGTCATCGAAGGGCCTTTATGTGGGGATTATTATAAAATTCGGGAACTTTTGTATTCACAATTTTATTTGCTATAG

Protein sequence

MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDIDSAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFSTLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGNDNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFGEVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPLCGDYYKIRELLYSQFYLL

Homology

[Close]

BLAST of Sed0009742 vs. NCBI nr
Match: XP_022141034.1 (cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Momordica charantia])

HSP 1 Score: 1399.4 bits (3621), Expect = 0.0e+00
Identity = 691/738 (93.63%), Postives = 714/738 (96.75%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGL+AP++STEPV+RLG LTMYDQ+ ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  +TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYV+SSTI+YIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFVEWA+DAKNL+LFSE+GQF+T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQADPPPKAVKVTVSKRVPL GDEL+AYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMI+DASSN  PDVGGS   AYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ  + A GD DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENG LSLLPLSK ALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMAD+KQFLASKGIQVEFAGGALRCGEYVT+RKVADASQK GGS TQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Sed0009742 vs. NCBI nr
Match: XP_008439247.1 (PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis melo])

HSP 1 Score: 1397.1 bits (3615), Expect = 0.0e+00
Identity = 693/738 (93.90%), Postives = 709/738 (96.07%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAP++STEPV+RLG LTMYDQF ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  ITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPI+FLTYVASSTI+YIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFV+WA DAKNL+LFSERGQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMI+DASSN  PDVG S GGAYRDILIDGFVPPSTSVAPMFPFYENTS WDDFG
Sbjct: 421 DNDTGDPMIIDASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ  + A GD DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQ+EETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQVEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENG LSLLPLSK   PHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKV DASQK GGS TQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Sed0009742 vs. NCBI nr
Match: XP_004140773.1 (cleavage and polyadenylation specificity factor subunit 2 [Cucumis sativus] >KGN57386.1 hypothetical protein Csa_010311 [Cucumis sativus])

HSP 1 Score: 1395.6 bits (3611), Expect = 0.0e+00
Identity = 692/738 (93.77%), Postives = 708/738 (95.93%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAP++STEPV+RLG LTMYDQF ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  +TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPI+FLTYVASSTI+YIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFV+WA DAKNL+LFSERGQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMI+DASSNV PDVG S GGAYRDILIDGFVPPST VAPMFPFYENTS WDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ  + A GD DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEI WLDAEVGKTENG LSLLPLSK   PHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKV DASQK GGS TQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Sed0009742 vs. NCBI nr
Match: XP_038899782.1 (cleavage and polyadenylation specificity factor subunit 2 [Benincasa hispida])

HSP 1 Score: 1395.2 bits (3610), Expect = 0.0e+00
Identity = 692/738 (93.77%), Postives = 709/738 (96.07%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAP++STEPV+RLG LTMYDQF ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  +TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPI+FLTYVASSTI+YIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFV+WA DAKNL+LFSERGQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DND GDPMI+DASSNV PDVGGS GGA+RDILIDGFVPP TSVAPMFPFYENTS WDDFG
Sbjct: 421 DNDAGDPMIIDASSNVAPDVGGSHGGAFRDILIDGFVPPLTSVAPMFPFYENTSTWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ  + A GD DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTEN  LSLLPLSK A PHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENETLSLLPLSKAASPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKV DASQK GGS T QVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTHQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Sed0009742 vs. NCBI nr
Match: XP_022141035.1 (cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Momordica charantia])

HSP 1 Score: 1393.3 bits (3605), Expect = 0.0e+00
Identity = 690/738 (93.50%), Postives = 713/738 (96.61%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGL+AP++STEPV+RLG LTMYDQ+ ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  +TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYV+SSTI+YIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFVEWA+DAKNL+LFSE+GQF+T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQADPPPKAVKVTVSKRVPL GDEL+AYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMI+DASSN  PD GGS   AYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPD-GGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ  + A GD DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENG LSLLPLSK ALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMAD+KQFLASKGIQVEFAGGALRCGEYVT+RKVADASQK GGS TQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 737

[Close]

BLAST of Sed0009742 vs. ExPASy Swiss-Prot
Match: Q9LKF9 (Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CPSF100 PE=1 SV=2)

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 565/741 (76.25%), Postives = 657/741 (88.66%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVS+DGFNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLH+GALPYAMKQLGLSAP+Y+TEPV RLG LTMYDQF +RKQVS+FDLFTLDDID
Sbjct: 61  SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  + RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           RHLNGT+L+SFVRPAVLITDAY+AL  NQ  R+Q+DKEF DTI K L   GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAF 300
           GRVLEL+ ILE +W +   ++PIYFLTYV+SSTI+Y+KSFLEWMSD+I+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 301 LLKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFS 360
           LL+HVTLL  K++LDN P GPKVVLASMASLEAG++ +IFVEWA+D +NL+LF+E GQF 
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 361 TLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNK-KKEEALKASLLKEEQSRASH 420
           TLARMLQ+ PPPK VKVT+SKRVPL G+ELIAYEEEQN+ K+EEAL+ASL+KEE+++ASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 421 GNDNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDD 480
           G+D+++ +PMI+D  +    DV GS G AY+DILIDGFVPPS+SVAPMFP+Y+NTSEWDD
Sbjct: 421 GSDDNSSEPMIIDTKTT--HDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480

Query: 481 FGEVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCS 540
           FGE+INPDDYVIKDEDMD+G +   GD DG+LDE  A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEET 600
           L  MD+EGRSDGRSIKS+++HV+PLKLVLVH  AEATEHLKQHCL N+CPHV+APQIEET
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHK 660
           +DVTSDLCAYKVQLSEKLMSNV+FKKLGD E+AW+D+EVGKTE    SLLP+   A PHK
Sbjct: 601 VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 660

Query: 661 SVLVGDLKMADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVADASQKAGGSSTQQVVIE 720
            VLVGDLK+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKV    QK G S  QQ++IE
Sbjct: 661 PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIE 720

Query: 721 GPLCGDYYKIRELLYSQFYLL 739
           GPLC DYYKIR+ LYSQFYLL
Sbjct: 721 GPLCEDYYKIRDYLYSQFYLL 739

[Close]

BLAST of Sed0009742 vs. ExPASy Swiss-Prot
Match: Q652P4 (Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0569400 PE=2 SV=1)

HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 537/740 (72.57%), Postives = 631/740 (85.27%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPL G + E PL YL++VDGF FL+DCGW D  DP+ LQPL++VA TIDAVL+
Sbjct: 1   MGTSVQVTPLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SH DT+HLGALPYAMK LGLSAP+Y+TEPVFRLG LT+YD F +R+QVS+FDLFTLDDID
Sbjct: 61  SHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           +AF  + RL YSQNH L+ KGEGIVIAPHVAGH LGGT+WKITKDGEDV+YAVDFNHRKE
Sbjct: 121 AAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT L SFVRPAVLITDAYNALNN  Y+RQ+D++F D + K L   G+VLLP+DTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLE++ ILE YW +  L YPIYFLT V++ST++Y+KSFLEWM+D+I+KSFEHTR+NAFL
Sbjct: 241 RVLEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LK VT +  K EL+   + PKVVLASMASLE G+SHDIFV+ A++AKNL+LF+E+GQF T
Sbjct: 301 LKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNK-KKEEALKASLLKEEQSRASHG 420
           LARMLQ DPPPKAVKVT+SKR+PL GDEL AYEEEQ + KKEEALKASL KEE+ +AS G
Sbjct: 361 LARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEALKASLNKEEEKKASLG 420

Query: 421 NDNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDF 480
           ++    DPM++DAS++  P   GS+ G   DILIDGFVPPS+SVAPMFPF+ENTSEWDDF
Sbjct: 421 SNAKASDPMVIDASTSRKPSNAGSKFGGNVDILIDGFVPPSSSVAPMFPFFENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQGVIQAVGDA-DGKLDETAANLILDIKPSKVVSNELTVQVKCS 540
           GEVINP+DY++K E+MD  ++   GD  D  LDE +A L+LD  PSKV+SNE+TVQVKCS
Sbjct: 481 GEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTVQVKCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEET 600
           L YMDFEGRSDGRS+KS+++HVAPLKLVLVHG+AEATEHLK HC KN   HV+APQIEET
Sbjct: 541 LAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKNSDLHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHK 660
           IDVTSDLCAYKVQLSEKLMSNV+ KKLG++EIAW+DAEVGKT++  L+LLP S     HK
Sbjct: 601 IDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKTDD-KLTLLPPSSTPAAHK 660

Query: 661 SVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEG 720
           SVLVGDLK+ADFKQFLA+KG+QVEFAGGALRCGEY+TLRK+ DA QK G + +QQ+VIEG
Sbjct: 661 SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITLRKIGDAGQK-GSTGSQQIVIEG 720

Query: 721 PLCGDYYKIRELLYSQFYLL 739
           PLC DYYKIRELLYSQFYLL
Sbjct: 721 PLCEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Sed0009742 vs. ExPASy Swiss-Prot
Match: Q9V3D6 (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila melanogaster OX=7227 GN=Cpsf100 PE=1 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 2.6e-151
Identity = 306/779 (39.28%), Postives = 455/779 (58.41%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++  + G  +E+P  Y++ +D    L+DCGW++ FD   ++ L R   T+DAVL+
Sbjct: 1   MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPD  HLGALPY + +LGL+ PIY+T PVF++G + MYD + +   + +FDLF+LDD+D
Sbjct: 61  SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF  IT+L Y+Q   L  KG GI I P  AGH++GGT+WKI K G ED++YA DFNH+K
Sbjct: 121 TAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           ERHL+G  L+   RP++LITDAYNA   Q  RR +D++    I +T+R NGNVL+ VDTA
Sbjct: 181 ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEES---LNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRN 300
           GRVLEL  +L+  W+ +    + Y +  L  V+ + IE+ KS +EWMSD + K+FE  RN
Sbjct: 241 GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN 300

Query: 301 NAFLLKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERG 360
           N F  KH+ L    +++   P GPKVVLAS   LE+G++ D+FV+WAS+A N ++ + R 
Sbjct: 301 NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRT 360

Query: 361 QFSTLA-RMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSR 420
              TLA  +++   P K +++ V +RV L G EL    EE  + + E L   ++K +   
Sbjct: 361 SPGTLAMELVENCAPGKQIELDVRRRVDLEGAEL----EEYLRTQGEKLNPLIVKPDVEE 420

Query: 421 ASHGNDNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSE 480
            S     D  +  ++    ++   V   +G  +      GF   +     MFP++E   +
Sbjct: 421 ESSSESEDDIEMSVITGKHDI---VVRPEGRHH-----SGFFKSNKRHHVMFPYHEEKVK 480

Query: 481 WDDFGEVINPDDYVIKD----------EDMDQGV------IQAVGDADGKLDETAANLIL 540
            D++GE+IN DDY I D          E   + V      I A   A+G + +    L+ 
Sbjct: 481 CDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKEEPGIGAEQQANGGIVDNDVQLL- 540

Query: 541 DIKPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLK 600
             KP+K++S   T++V   +  +DFEGRSDG S+  ILS + P +++++HGTAE T+ + 
Sbjct: 541 -EKPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVA 600

Query: 601 QHCLKNVCPHVFAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGK 660
           +HC +NV   VF PQ  E IDVTS++  Y+V+L+E L+S + F+K  D E+AW+D  +G 
Sbjct: 601 RHCEQNVGARVFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGM 660

Query: 661 -------------------TENGPLSLLPLSKPALP-HKSVLVGDLKMADFKQFLASKGI 720
                               E   L+L  L+   +P H SVL+ +LK++DFKQ L    I
Sbjct: 661 RVKAIEAPMDVTVEQDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLMRNNI 720

Query: 721 QVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPLCGDYYKIRELLYSQFYLL 739
             EF+GG L C       +  DA          +V +EG L  +YYKIRELLY Q+ ++
Sbjct: 721 NSEFSGGVLWCSNGTLALRRVDAG---------KVAMEGCLSEEYYKIRELLYEQYAIV 756

[Close]

BLAST of Sed0009742 vs. ExPASy Swiss-Prot
Match: Q10568 (Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 GN=CPSF2 PE=1 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 5.9e-151
Identity = 303/808 (37.50%), Postives = 462/808 (57.18%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++T L GV  E+ L YL+ VD F FL+DCGW++HF   ++  L +    IDAVL+
Sbjct: 1   MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPD LHLGALPYA+ +LGL+  IY+T PV+++G + MYD + +R    +F LFTLDD+D
Sbjct: 61  SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF  I +L +SQ  +L GKG G+ I P  AGH++GGT+WKI KDG E+++YAVDFNH++
Sbjct: 121 AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           E HLNG  LE   RP++LITD++NA   QP R+Q+D++    + +TLR +GNVL+ VDTA
Sbjct: 181 EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIY---FLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRN 300
           GRVLEL Q+L+  W  +     +Y    L  V+ + +E+ KS +EWMSD + + FE  RN
Sbjct: 241 GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN 300

Query: 301 NAFLLKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERG 360
           N F  +H++L    S+L   P  PKVVLAS   LE G+S D+F++W  D KN ++ + R 
Sbjct: 301 NPFQFRHLSLCHGLSDLARVP-SPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRT 360

Query: 361 QFSTLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRA 420
              TLAR L  +P  K  ++ + KRV L G EL  Y E++  KKE A K    KE    +
Sbjct: 361 TPGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDS 420

Query: 421 SHGND--NDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTS 480
           S  +D   D   P       ++     GS+ G+        F   +    PMFP  E   
Sbjct: 421 SDESDAEEDIDQPSAHKTKHDLMMKGEGSRKGS--------FFKQAKKSYPMFPAPEERI 480

Query: 481 EWDDFGEVINPDDYVIKD----EDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNE 540
           +WD++GE+I P+D+++ +    E+    +   + + D  +D+  +++     P+K +S  
Sbjct: 481 KWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDV-----PTKCISTT 540

Query: 541 LTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCL----KNV 600
            ++++K  + Y+D+EGRSDG SIK I++ + P +L++VHG  EA++ L + C     K++
Sbjct: 541 ESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDI 600

Query: 601 CPHVFAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAW----LDAEVGKTEN 660
              V+ P++ ET+D TS+   Y+V+L + L+S++ F K  D E+AW    LD  V K + 
Sbjct: 601 --KVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDT 660

Query: 661 GPL-----------------------------------------------SLLPLSKPAL 720
           G +                                                ++P  +P  
Sbjct: 661 GVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLP 720

Query: 721 P-----HKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSS 739
           P     H+SV + + +++DFKQ L  +GIQ EF GG L C   V +R+          + 
Sbjct: 721 PHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRR----------TE 780

[Close]

BLAST of Sed0009742 vs. ExPASy Swiss-Prot
Match: Q9P2I0 (Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=9606 GN=CPSF2 PE=1 SV=2)

HSP 1 Score: 535.8 bits (1379), Expect = 7.7e-151
Identity = 303/808 (37.50%), Postives = 462/808 (57.18%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++T L GV  E+ L YL+ VD F FL+DCGW++HF   ++  L +    IDAVL+
Sbjct: 1   MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPD LHLGALPYA+ +LGL+  IY+T PV+++G + MYD + +R    +F LFTLDD+D
Sbjct: 61  SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF  I +L +SQ  +L GKG G+ I P  AGH++GGT+WKI KDG E+++YAVDFNH++
Sbjct: 121 AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           E HLNG  LE   RP++LITD++NA   QP R+Q+D++    + +TLR +GNVL+ VDTA
Sbjct: 181 EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIY---FLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRN 300
           GRVLEL Q+L+  W  +     +Y    L  V+ + +E+ KS +EWMSD + + FE  RN
Sbjct: 241 GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN 300

Query: 301 NAFLLKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERG 360
           N F  +H++L    S+L   P  PKVVLAS   LE G+S D+F++W  D KN ++ + R 
Sbjct: 301 NPFQFRHLSLCHGLSDLARVP-SPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRT 360

Query: 361 QFSTLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRA 420
              TLAR L  +P  K  ++ + KRV L G EL  Y E++  KKE A K    KE    +
Sbjct: 361 TPGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDS 420

Query: 421 SHGND--NDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTS 480
           S  +D   D   P       ++     GS+ G+        F   +    PMFP  E   
Sbjct: 421 SDESDIEEDIDQPSAHKTKHDLMMKGEGSRKGS--------FFKQAKKSYPMFPAPEERI 480

Query: 481 EWDDFGEVINPDDYVIKD----EDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNE 540
           +WD++GE+I P+D+++ +    E+    +   + + D  +D+  +++     P+K +S  
Sbjct: 481 KWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDV-----PTKCISTT 540

Query: 541 LTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCL----KNV 600
            ++++K  + Y+D+EGRSDG SIK I++ + P +L++VHG  EA++ L + C     K++
Sbjct: 541 ESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDI 600

Query: 601 CPHVFAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAW----LDAEVGKTEN 660
              V+ P++ ET+D TS+   Y+V+L + L+S++ F K  D E+AW    LD  V K + 
Sbjct: 601 --KVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDT 660

Query: 661 GPL-----------------------------------------------SLLPLSKPAL 720
           G +                                                ++P  +P  
Sbjct: 661 GVILEEGELKDDGEDSEMQVEAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLP 720

Query: 721 P-----HKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSS 739
           P     H+SV + + +++DFKQ L  +GIQ EF GG L C   V +R+          + 
Sbjct: 721 PHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRR----------TE 780

[Close]

BLAST of Sed0009742 vs. ExPASy TrEMBL
Match: A0A6J1CHF7 (Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia OX=3673 GN=LOC111011537 PE=3 SV=1)

HSP 1 Score: 1399.4 bits (3621), Expect = 0.0e+00
Identity = 691/738 (93.63%), Postives = 714/738 (96.75%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGL+AP++STEPV+RLG LTMYDQ+ ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  +TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYV+SSTI+YIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFVEWA+DAKNL+LFSE+GQF+T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQADPPPKAVKVTVSKRVPL GDEL+AYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMI+DASSN  PDVGGS   AYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ  + A GD DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENG LSLLPLSK ALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMAD+KQFLASKGIQVEFAGGALRCGEYVT+RKVADASQK GGS TQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Sed0009742 vs. ExPASy TrEMBL
Match: A0A1S3AXY2 (Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo OX=3656 GN=LOC103484088 PE=3 SV=1)

HSP 1 Score: 1397.1 bits (3615), Expect = 0.0e+00
Identity = 693/738 (93.90%), Postives = 709/738 (96.07%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAP++STEPV+RLG LTMYDQF ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  ITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPI+FLTYVASSTI+YIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFV+WA DAKNL+LFSERGQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMI+DASSN  PDVG S GGAYRDILIDGFVPPSTSVAPMFPFYENTS WDDFG
Sbjct: 421 DNDTGDPMIIDASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ  + A GD DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQ+EETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQVEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENG LSLLPLSK   PHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKV DASQK GGS TQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Sed0009742 vs. ExPASy TrEMBL
Match: A0A0A0LBF9 (Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_3G182220 PE=3 SV=1)

HSP 1 Score: 1395.6 bits (3611), Expect = 0.0e+00
Identity = 692/738 (93.77%), Postives = 708/738 (95.93%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAP++STEPV+RLG LTMYDQF ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  +TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPI+FLTYVASSTI+YIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFV+WA DAKNL+LFSERGQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMI+DASSNV PDVG S GGAYRDILIDGFVPPST VAPMFPFYENTS WDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ  + A GD DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEI WLDAEVGKTENG LSLLPLSK   PHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKV DASQK GGS TQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Sed0009742 vs. ExPASy TrEMBL
Match: A0A6J1CGU1 (Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia OX=3673 GN=LOC111011537 PE=3 SV=1)

HSP 1 Score: 1393.3 bits (3605), Expect = 0.0e+00
Identity = 690/738 (93.50%), Postives = 713/738 (96.61%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGL+AP++STEPV+RLG LTMYDQ+ ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  +TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYV+SSTI+YIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFVEWA+DAKNL+LFSE+GQF+T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQADPPPKAVKVTVSKRVPL GDEL+AYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMI+DASSN  PD GGS   AYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPD-GGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ  + A GD DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENG LSLLPLSK ALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMAD+KQFLASKGIQVEFAGGALRCGEYVT+RKVADASQK GGS TQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 737

[Close]

BLAST of Sed0009742 vs. ExPASy TrEMBL
Match: A0A6J1E3G2 (Cleavage and polyadenylation specificity factor subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111430467 PE=3 SV=1)

HSP 1 Score: 1391.3 bits (3600), Expect = 0.0e+00
Identity = 688/738 (93.22%), Postives = 711/738 (96.34%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAP+YSTEPV+RLG LTMYDQF ARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  +TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLN+PI+FLTYVASSTI+YIKSFLEWMSD+IAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFST 360
           LKHVTLL  KSELDN P+GPKVVLASMASLEAGYSHDIFVEWA+DAKNL+LFSERGQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNKKKEEALKASLLKEEQSRASHGN 420
           LARMLQ+DPPPKAVKVTVSKRVPLTGDEL+AYEEEQN+KKEEALKASLLKEEQS+ASHG 
Sbjct: 361 LARMLQSDPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMI+DASSNV PDV GS GGAYRDI IDGFVPPSTSV+PMFPFYENTS WDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ       D DGKLDETAANLILD+KPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHV+APQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEI+WLDA+VGKTENG LSLLPLSK ALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVADASQKAGGSSTQQVVIEGPL 720
           LVGDLKMADFKQFL+SKGIQVEFAGGALRCGEYVTLRKV+DASQK GGS TQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDASQKGGGSGTQQVVIEGPL 720

Query: 721 CGDYYKIRELLYSQFYLL 739
           C DYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Sed0009742 vs. TAIR 10
Match: AT5G23880.1 (cleavage and polyadenylation specificity factor 100 )

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 565/741 (76.25%), Postives = 657/741 (88.66%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGV+NENPLSYLVS+DGFNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQVSEFDLFTLDDID 120
           SHPDTLH+GALPYAMKQLGLSAP+Y+TEPV RLG LTMYDQF +RKQVS+FDLFTLDDID
Sbjct: 61  SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 121 SAFLTITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAF  + RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           RHLNGT+L+SFVRPAVLITDAY+AL  NQ  R+Q+DKEF DTI K L   GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAF 300
           GRVLEL+ ILE +W +   ++PIYFLTYV+SSTI+Y+KSFLEWMSD+I+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 301 LLKHVTLLSKKSELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFS 360
           LL+HVTLL  K++LDN P GPKVVLASMASLEAG++ +IFVEWA+D +NL+LF+E GQF 
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 361 TLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNK-KKEEALKASLLKEEQSRASH 420
           TLARMLQ+ PPPK VKVT+SKRVPL G+ELIAYEEEQN+ K+EEAL+ASL+KEE+++ASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 421 GNDNDTGDPMIVDASSNVPPDVGGSQGGAYRDILIDGFVPPSTSVAPMFPFYENTSEWDD 480
           G+D+++ +PMI+D  +    DV GS G AY+DILIDGFVPPS+SVAPMFP+Y+NTSEWDD
Sbjct: 421 GSDDNSSEPMIIDTKTT--HDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480

Query: 481 FGEVINPDDYVIKDEDMDQGVIQAVGDADGKLDETAANLILDIKPSKVVSNELTVQVKCS 540
           FGE+INPDDYVIKDEDMD+G +   GD DG+LDE  A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVFAPQIEET 600
           L  MD+EGRSDGRSIKS+++HV+PLKLVLVH  AEATEHLKQHCL N+CPHV+APQIEET
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGPLSLLPLSKPALPHK 660
           +DVTSDLCAYKVQLSEKLMSNV+FKKLGD E+AW+D+EVGKTE    SLLP+   A PHK
Sbjct: 601 VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 660

Query: 661 SVLVGDLKMADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVADASQKAGGSSTQQVVIE 720
            VLVGDLK+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKV    QK G S  QQ++IE
Sbjct: 661 PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIE 720

Query: 721 GPLCGDYYKIRELLYSQFYLL 739
           GPLC DYYKIR+ LYSQFYLL
Sbjct: 721 GPLCEDYYKIRDYLYSQFYLL 739

[Close]

BLAST of Sed0009742 vs. TAIR 10
Match: AT2G01730.1 (cleavage and polyadenylation specificity factor 73 kDa subunit-II )

HSP 1 Score: 133.3 bits (334), Expect = 8.2e-31
Identity = 94/359 (26.18%), Postives = 163/359 (45.40%), Query Frame = 0


Query: 22  LVSVDGFNFLIDCGW-------NDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYA 81
           +V+++G   + DCG        N + + +L+       + I  ++I+H    H+GALPY 
Sbjct: 20  VVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITHFHMDHVGALPYF 79

Query: 82  MKQLGLSAPIYSTEPVFRLGYLTMYDQFFARKQV---SEFDLFTLDDIDSAFLTITRLTY 141
            +  G + PIY + P   L  L + D  + R  V    E +LFT   I +    +  +  
Sbjct: 80  TEVCGYNGPIYMSYPTKALSPLMLED--YRRVMVDRRGEEELFTTTHIANCMKKVIAIDL 139

Query: 142 SQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESF 201
            Q   +    E + I  + AGH+LG  +         ++Y  D+N   +RHL    ++  
Sbjct: 140 KQTIQVD---EDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHLGAAKIDR- 199

Query: 202 VRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEW 261
           ++  +LI+++  A   +  +  +++EF   + K +   G  L+P    GR  EL  +L+ 
Sbjct: 200 LQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDD 259

Query: 262 YWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLSKKS 321
           YWE  ++  PIYF + +      Y K  + W S  + +  +H  +N F  K+V    +  
Sbjct: 260 YWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKE--KHNTHNPFDFKNVKDFDR-- 319

Query: 322 ELDNTPEGPKVVLASMASLEAGYSHDIFVEWASDAKNLMLFSERGQFSTLARMLQADPP 371
            L + P GP V+ A+   L AG+S ++F  WA    NL+         T+   L A  P
Sbjct: 320 SLIHAP-GPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAGKP 367

[Close]

BLAST of Sed0009742 vs. TAIR 10
Match: AT3G07530.1 (CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 624 Blast hits to 615 proteins in 160 species: Archae - 54; Bacteria - 6; Metazoa - 333; Fungi - 44; Plants - 93; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 1.7e-04
Identity = 36/138 (26.09%), Postives = 61/138 (44.20%), Query Frame = 0


Query: 228 ANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIYFLTYVASSTIEYIKSFLEWMSDTI 287
           A G+ L+ +   G VL+L+++L    E  SL  PI+ ++ VA   + Y  +  EW+ +  
Sbjct: 343 AGGSTLITITRIGIVLQLLELLSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQR 402

Query: 288 AK-------SFEHTR--NNAFLLKHVTLLSKKSELDNTP--EGPKVVLASMASLEAGYSH 347
            +       SF H +   N  +     + S      N    + P +V AS  SL  G S 
Sbjct: 403 QEKLISGEPSFGHLKFIKNKKIHLFPAIHSPNLIYANRTSWQEPCIVFASHWSLRLGPSV 462

Query: 348 DIFVEWASDAKNLMLFSE 355
            +   W  D K+L++  +
Sbjct: 463 QLLQRWRGDPKSLLVLED 480

The following BLAST results are available for this feature:

BLAST of Sed0009742 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141034.1	0.0e+00	93.63	cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Momordica ...	[more]
XP_008439247.1	0.0e+00	93.90	PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis me...	[more]
XP_004140773.1	0.0e+00	93.77	cleavage and polyadenylation specificity factor subunit 2 [Cucumis sativus] >KGN...	[more]
XP_038899782.1	0.0e+00	93.77	cleavage and polyadenylation specificity factor subunit 2 [Benincasa hispida]	[more]
XP_022141035.1	0.0e+00	93.50	cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Momordica ...	[more]

BLAST of Sed0009742 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKF9	0.0e+00	76.25	Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thalian...	[more]
Q652P4	0.0e+00	72.57	Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp....	[more]
Q9V3D6	2.6e-151	39.28	Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila...	[more]
Q10568	5.9e-151	37.50	Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 ...	[more]
Q9P2I0	7.7e-151	37.50	Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=960...	[more]

BLAST of Sed0009742 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHF7	0.0e+00	93.63	Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia...	[more]
A0A1S3AXY2	0.0e+00	93.90	Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo OX=365...	[more]
A0A0A0LBF9	0.0e+00	93.77	Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis sativus OX=...	[more]
A0A6J1CGU1	0.0e+00	93.50	Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia...	[more]
A0A6J1E3G2	0.0e+00	93.22	Cleavage and polyadenylation specificity factor subunit 2 OS=Cucurbita moschata ...	[more]

BLAST of Sed0009742 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23880.1	0.0e+00	76.25	cleavage and polyadenylation specificity factor 100	[more]
AT2G01730.1	8.2e-31	26.18	cleavage and polyadenylation specificity factor 73 kDa subunit-II	[more]
AT3G07530.1	1.7e-04	26.09	CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712); BEST Arabidop...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 392..412
IPR001279	Metallo-beta-lactamase	SMART	SM00849	Lactamase_B_5a	coord: 17..222 e-value: 0.0077 score: 23.1
IPR001279	Metallo-beta-lactamase	PFAM	PF16661	Lactamase_B_6	coord: 22..197 e-value: 3.0E-53 score: 180.1
IPR022712	Beta-Casp domain	SMART	SM01027	Beta_Casp_2	coord: 242..365 e-value: 1.2E-23 score: 94.5
IPR022712	Beta-Casp domain	PFAM	PF10996	Beta-Casp	coord: 242..365 e-value: 2.5E-18 score: 66.4
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	GENE3D	3.60.15.10		coord: 8..257 e-value: 2.0E-75 score: 255.1
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 5..601
IPR025069	Cleavage and polyadenylation specificity factor 2, C-terminal	PFAM	PF13299	CPSF100_C	coord: 652..735 e-value: 1.1E-17 score: 64.7
IPR011108	Zn-dependent metallo-hydrolase, RNA specificity domain	PFAM	PF07521	RMMBL	coord: 532..583 e-value: 1.9E-11 score: 43.7
IPR027075	Cleavage and polyadenylation specificity factor subunit 2	PANTHER	PTHR45922	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2	coord: 1..737
IPR035639	CPSF2, metallo-hydrolase domain	CDD	cd16293	CPSF2-like_MBL-fold	coord: 8..203 e-value: 2.89115E-107 score: 323.318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009742.1	Sed0009742.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage
biological_process	GO:0006378	mRNA polyadenylation
biological_process	GO:0098789	pre-mRNA cleavage required for polyadenylation
biological_process	GO:0006508	proteolysis
biological_process	GO:0006379	mRNA cleavage
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003723	RNA binding