Sed0009732 (gene) Chayote v1

Overview
NameSed0009732
Typegene
OrganismSechium edule (Chayote v1)
DescriptionMATH domain-containing protein
LocationLG11: 30081003 .. 30083419 (-)
RNA-Seq ExpressionSed0009732
SyntenySed0009732
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCAAACCTATAACCTTGAGATTGTTGGTTCAAGATGTCGGTTGAGTTTGGTTCATTTTGGATCTTATGTCATTCTTCTTTTTTTTTTTTTTTTTTTTTGAAATTGATCTTGTGGCATTCTTGACCACTAAATTACTCCATTGTAGTTTAAATGAAGATCTTATGTTCTTTTTTATACATGTGAGTATATGGGTCGGTTTATTCCCACCTCAACTTTTCTCATGTGATATATGAACCCTATAAAATTTGGATTGAACCCATATAACCTTACAATATTGGGATGATGTTTGGAAAACATACAAATATGATCACTTTTTTAAAAAATTTGCAACAAGTATTAATGAGTAATGTTACATACTTTCTTATAATACTGTATAAATGAATATGTAGAATACAATATTAACACGTATTAATGACTATGGATGCAATATTTTAAAATTTGCCTACATTTGTAATTATTTTATGAGAAGAGCTCATCCAATATAATTTTCCTTTATTTATTTACGGAATTCTTGACCACTAAATCACTCCAAGATATTTTAATAGTTTAATGTAAGATGTTATGTTTGTAAATTTTTTTTTTTATTGGTTTGATTGTTTGTGGTAGGAAAAGGGTCTGATCATATCTCCCTCTATTTGGTATCTGCTGAGGACAAGGTTTTATCTTCTAATTCAGTGGTCAATGCTGTGTTTACCTTTCTGGTTTATGATAATCTCAACGACAGGTACTTGACAATCCAAGGTAACCAAATCCAAACACATGTTTTTTTTAATAAGTTTTTTTTTCTTTCTATGATGTTTTGTAAATTGATTACAGGTTAAAATGTAAATTTAGTCTTTGACGGTTCTTCATGTTTATAGATAATCGTCTCTGACCTTTAAAAGTGTTTAATAGGTCATTGAACTCTTATTGTTGTGTCTAGCAATTTTTTTTTTTCAAATCTGTGACTGTCTGGGCCAGCTTGCGCGCACCTCGACTAATGTCACGGGGCACACCGCTTGACCCTACAACATTTGGATGACAACCCATAGGAAATTAATTCCTAGGTAGGTGGCCACCATGAGGATTGAACTCATCACCTTATGCACCCCAAGACCCTCTTTGATCAATTGAGCCACCCCATAATGGTTGTGTCTAGCATATTTGATCAAGTAGAGTATAACGTTCTAGTATTTGAAAAGAATGAGTTGAATCCATAATGACCGCCTGCGTAAAATAAGTAATCTTGACAACTAAATGTTGTAAGGTTAGACGCTTGAATGAAAAATAGTTCCGTAACATATTCATTTTTTTCAAAGTTAAGTAACCTATTATGCATACAATTGAACTTTGTGTATAACAGGTTTTTAAACTTTCAAACTTTAAAAAAGTCATACATGTAGGATACATGATTAAAAGTCAAAAGTGAGAATAACTCAACGGTACAATTACATCCCCTCAAGCCTCAACTAAGAAGTAAGGGGTTCGAATTCCTACCCCTAACATTGTTAATGTTGTTGAACTAAAAAAATATATAATTACTTATTCGACATGTAGTAATTTGTCGCTTAATCGTGATTTTATTCAGATGGGAAAATGAGAGGTTTTCATGCGATAAAGGCAGAGTGGGGGTTTGAAAAGTTGATTTCACTTGCCAGTTTCAATGCTGCTTCAAATGGATTCTTGGTTGATGATTGTTGTGCATTTGGAGTTGACATTTTTGTAAAGAAAGGTGATGAATGGGAGGGGGATGTTCTTTCCTTAGTAAAGCAACCAACAAATCACAAATATACCTGGAGCATCAATAACTTTTCACAACTACCTCATAACACTACTAAGTTTTCTGATCCGTTTACCGTGGAGAGCTATCGATGGTATGCAAAATTTTGATCTACAAACACTTTTTAATATAAGAAACGAAAACTATTTCATCTATAGAATGAAAGAGTTATAGAGGAGAGGATTACATTGATGCTGAAGTTTGGACATGAACATATCTATCTTTCAAGAAACTCCGTCTCGATTATCCTAAAACAAAGAATGGATTTTTTTCATTGTACCTGGCCTTTGATGGTTTGGAAGACCTTCCCCAAACTTCAAAGGTGTATGCTGAATATGAATTTGCTGTGTTGAGTCAACTTGATGAAGTTGCACCATTTACAAGAACATGTAATTAGCAACCCTTTTAATCATTGTAATTTCTGAAGCTTTTCCTTCAAATCTTTGTTCTCAACAGTGTAAGTTGGTTTTTGTGTGTGTGTGTGTGCAGATAGCTGTTGGTTTGAGCTTGATAGCAAAGAATATGCTTGGGGTACTCTAAATCTTATGTCGTTGTGCGATCTCAAGGAATCGACCAAAGGCTTTATTCTGAATGATACCTTGATTATTGAAGTGAAGATTAATGTTATCTCCACCTGGAAAGAGTTTCTGTAG

mRNA sequence

ATGGGTCAAACCTATAACCTTGAGATTTTTTTTTTTCTTTCTATGATGTTTTGTAAATTGATTACAGATGGGAAAATGAGAGGTTTTCATGCGATAAAGGCAGAGTGGGGGTTTGAAAAGTTGATTTCACTTGCCAGTTTCAATGCTGCTTCAAATGGATTCTTGGTTGATGATTGTTGTGCATTTGGAGTTGACATTTTTGTAAAGAAAGGTGATGAATGGGAGGGGGATGTTCTTTCCTTAGTAAAGCAACCAACAAATCACAAATATACCTGGAGCATCAATAACTTTTCACAACTACCTCATAACACTACTAAGTTTTCTGATCCGTTTACCAAACTCCGTCTCGATTATCCTAAAACAAAGAATGGATTTTTTTCATTGTACCTGGCCTTTGATGGTTTGGAAGACCTTCCCCAAACTTCAAAGGTGTATGCTGAATATGAATTTGCTGTGTTGAGTCAACTTGATGAAGTTGCACCATTTACAAGAACATATAGCTGTTGGTTTGAGCTTGATAGCAAAGAATATGCTTGGGGTACTCTAAATCTTATGTCGTTGTGCGATCTCAAGGAATCGACCAAAGGCTTTATTCTGAATGATACCTTGATTATTGAAGTGAAGATTAATGTTATCTCCACCTGGAAAGAGTTTCTGTAG

Coding sequence (CDS)

ATGGGTCAAACCTATAACCTTGAGATTTTTTTTTTTCTTTCTATGATGTTTTGTAAATTGATTACAGATGGGAAAATGAGAGGTTTTCATGCGATAAAGGCAGAGTGGGGGTTTGAAAAGTTGATTTCACTTGCCAGTTTCAATGCTGCTTCAAATGGATTCTTGGTTGATGATTGTTGTGCATTTGGAGTTGACATTTTTGTAAAGAAAGGTGATGAATGGGAGGGGGATGTTCTTTCCTTAGTAAAGCAACCAACAAATCACAAATATACCTGGAGCATCAATAACTTTTCACAACTACCTCATAACACTACTAAGTTTTCTGATCCGTTTACCAAACTCCGTCTCGATTATCCTAAAACAAAGAATGGATTTTTTTCATTGTACCTGGCCTTTGATGGTTTGGAAGACCTTCCCCAAACTTCAAAGGTGTATGCTGAATATGAATTTGCTGTGTTGAGTCAACTTGATGAAGTTGCACCATTTACAAGAACATATAGCTGTTGGTTTGAGCTTGATAGCAAAGAATATGCTTGGGGTACTCTAAATCTTATGTCGTTGTGCGATCTCAAGGAATCGACCAAAGGCTTTATTCTGAATGATACCTTGATTATTGAAGTGAAGATTAATGTTATCTCCACCTGGAAAGAGTTTCTGTAG

Protein sequence

MGQTYNLEIFFFLSMMFCKLITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLSLVKQPTNHKYTWSINNFSQLPHNTTKFSDPFTKLRLDYPKTKNGFFSLYLAFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDLKESTKGFILNDTLIIEVKINVISTWKEFL
Homology
BLAST of Sed0009732 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida])

HSP 1 Score: 225.3 bits (573), Expect = 5.0e-55
Identity = 121/211 (57.35%), Postives = 144/211 (68.25%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           + DGKMR F A+K EWG EKL+ L +FN ASNGFLVDDCC FGVDIFV   D   G+V S
Sbjct: 126 VQDGKMRRFSAMKTEWGIEKLLPLDTFNDASNGFLVDDCCVFGVDIFVMSCDGGMGEVFS 185

Query: 81  LVKQPTNHKYTWSINNFSQLPHNTTKFSDPFT------KLRLDYP----KTKNGFFSLYL 140
           L+KQP N++YTW +NNFSQL  +T K S+PFT      K+ L YP    K K+GF S+YL
Sbjct: 186 LIKQPKNYEYTWKLNNFSQL-GSTLKESNPFTVESYRWKILL-YPSGCSKAKSGFLSMYL 245

Query: 141 AFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKE--YAWGTLNLMSLC 200
            FD    LPQ S+VY EYE A+LSQL E  P   TY+CWF  D  E    WG  N  SL 
Sbjct: 246 LFDSSNQLPQGSQVYVEYEMAILSQL-EAVPVKETYNCWFGFDGVEAGRGWGAPNFSSLS 305

Query: 201 DLKESTKGFILNDTLIIEVKINVISTWKEFL 220
           DL+E TKG++LNDTL+ EVKINVIST K+ +
Sbjct: 306 DLEEPTKGYLLNDTLVTEVKINVISTLKKIV 333

BLAST of Sed0009732 vs. NCBI nr
Match: XP_031742213.1 (MATH domain and coiled-coil domain-containing protein At3g58340 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 8.9e-52
Identity = 112/211 (53.08%), Postives = 143/211 (67.77%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           + DGKMR F A K EWG EKL+ L +F  ASNGFLVDDCC FGVDIFV   D  +G+V S
Sbjct: 32  VQDGKMRRFSATKTEWGIEKLLPLNTFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFS 91

Query: 81  LVKQPTNHKYTWSINNFSQLPHNTTKFSDPFT------KLRLDYP----KTKNGFFSLYL 140
           L++QP N+KYTW +NNFS+L  ++ +  +PFT      K+RL +P    + K GFFS+YL
Sbjct: 92  LIEQPNNYKYTWKLNNFSKL-DSSLRECNPFTVENCCWKIRL-FPSGDLQAKPGFFSMYL 151

Query: 141 AFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKE--YAWGTLNLMSLC 200
               L++ PQ ++VY EYE AVLSQL++V P   TY CWF     E     G  N +SL 
Sbjct: 152 MLTNLKEFPQGAQVYVEYEMAVLSQLEDVPPIKETYICWFGFGGIEADKGCGASNFLSLS 211

Query: 201 DLKESTKGFILNDTLIIEVKINVISTWKEFL 220
           DLKE  +G++LNDTL+IEVKINVIST K+ +
Sbjct: 212 DLKEPARGYLLNDTLVIEVKINVISTLKKIV 240

BLAST of Sed0009732 vs. NCBI nr
Match: KAE8648447.1 (hypothetical protein Csa_008888 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 8.9e-52
Identity = 112/211 (53.08%), Postives = 143/211 (67.77%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           + DGKMR F A K EWG EKL+ L +F  ASNGFLVDDCC FGVDIFV   D  +G+V S
Sbjct: 129 VQDGKMRRFSATKTEWGIEKLLPLNTFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFS 188

Query: 81  LVKQPTNHKYTWSINNFSQLPHNTTKFSDPFT------KLRLDYP----KTKNGFFSLYL 140
           L++QP N+KYTW +NNFS+L  ++ +  +PFT      K+RL +P    + K GFFS+YL
Sbjct: 189 LIEQPNNYKYTWKLNNFSKL-DSSLRECNPFTVENCCWKIRL-FPSGDLQAKPGFFSMYL 248

Query: 141 AFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKE--YAWGTLNLMSLC 200
               L++ PQ ++VY EYE AVLSQL++V P   TY CWF     E     G  N +SL 
Sbjct: 249 MLTNLKEFPQGAQVYVEYEMAVLSQLEDVPPIKETYICWFGFGGIEADKGCGASNFLSLS 308

Query: 201 DLKESTKGFILNDTLIIEVKINVISTWKEFL 220
           DLKE  +G++LNDTL+IEVKINVIST K+ +
Sbjct: 309 DLKEPARGYLLNDTLVIEVKINVISTLKKIV 337

BLAST of Sed0009732 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida])

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-48
Identity = 112/208 (53.85%), Postives = 139/208 (66.83%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           I DGK+R FHAIK EWGFEKL+SL +FN  SNG LVDDCCAFGVD+ V K  +   ++LS
Sbjct: 128 IQDGKVRCFHAIKKEWGFEKLVSLDTFNDTSNGLLVDDCCAFGVDVIVMKSYDGNNEILS 187

Query: 81  LVKQPTNHKYTWSINNFSQLPHNTTKFSDPFT------KLRLDYPK----TKNGFFSLYL 140
           L+KQ  N+KYTW INNFSQL  N  + SDPFT      K+ L YP+       G+ S++L
Sbjct: 188 LIKQLKNYKYTWKINNFSQLSKNVYE-SDPFTVDNYTWKIEL-YPRGDSLAMTGYMSMFL 247

Query: 141 AFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDL 200
            FD  E LPQ S+VY EY+ AVLSQL   A        WF+ ++K  +WG  N MSL ++
Sbjct: 248 RFDSFEKLPQGSRVYVEYDIAVLSQLGG-AYTNYPVKHWFDGETK--SWGFGNFMSLSNV 307

Query: 201 KESTKGFILNDTLIIEVKINVISTWKEF 219
           KE  KGF+ +DTL++EVKINVIS  K F
Sbjct: 308 KEPMKGFLCDDTLMVEVKINVISILKSF 330

BLAST of Sed0009732 vs. NCBI nr
Match: XP_008465935.1 (PREDICTED: uncharacterized protein LOC103503506 [Cucumis melo])

HSP 1 Score: 202.2 bits (513), Expect = 4.6e-48
Identity = 108/209 (51.67%), Postives = 140/209 (66.99%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           + D KMR F A K EWG EKL+ L +F+ ASNGFLVDDCC FGVDIFV   +  +G+V S
Sbjct: 133 VQDEKMRQFSATKREWGIEKLLPLNTFSDASNGFLVDDCCVFGVDIFVMNCNVEKGEVFS 192

Query: 81  LVKQPTNHKYTWSINNFSQL------PHNTTKFSDPFTKLRLDYP----KTKNGFFSLYL 140
           L+KQP N+KYTW ++NFS+L        N+ +  + + K+RL +P    + K GFFS+YL
Sbjct: 193 LIKQPNNYKYTWKLDNFSKLLDCSFWECNSFRVENCWWKIRL-FPSGDWQAKPGFFSMYL 252

Query: 141 AFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEY--AWGTLNLMSLC 200
               L   P+ ++VY EYE AVLSQL+ V P   TY+CWF+    E     G  N MSL 
Sbjct: 253 MLSNLIAHPKGAQVYVEYEMAVLSQLEAVPPVKETYTCWFKSGCIEIYKGCGASNFMSLS 312

Query: 201 DLKESTKGFILNDTLIIEVKINVISTWKE 218
           DLKE TKG+++NDTL++EVKINVIST K+
Sbjct: 313 DLKERTKGYLVNDTLVVEVKINVISTIKK 340

BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q9M2J6 (MATH domain and coiled-coil domain-containing protein At3g58200 OS=Arabidopsis thaliana OX=3702 GN=At3g58200 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09
Identity = 46/138 (33.33%), Postives = 69/138 (50.00%), Query Frame = 0

Query: 82  VKQPTNHKYTWSINNFSQLPHNTTKFSDPFT----KLRL-DYPK--TKNGFFSLYLAFDG 141
           +++  ++K+ W I NFS L      FSD F     K RL  YPK    N  FSL+L    
Sbjct: 1   MEKEADNKFRWVIKNFSSLGSERV-FSDIFVVGSCKWRLMAYPKGVRDNRCFSLFLVVTD 60

Query: 142 LEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDLKEST 201
            + LP   K +      V++QL E     +    WF  D K  AWG L ++ L +LK   
Sbjct: 61  FKTLPCDWKRHTRLRLNVVNQLSEELSILKETQMWF--DQKTPAWGFLAMLPLTELKAEN 120

Query: 202 KGFILNDTLIIEVKINVI 213
            GF++N+ + I V+++V+
Sbjct: 121 GGFLVNEEVKIVVEVDVV 135

BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 7.4e-09
Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 0

Query: 83  KQPTNHKYTWSINNFSQLPHNTTK-FSDPFT----KLR-LDYPKTKN-GFFSLYLAFDGL 142
           + P   K+TW+I NFS+   NT K +SD F     K R L +PK  N    S+YL     
Sbjct: 50  EDPPTLKFTWTIPNFSR--QNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDA 109

Query: 143 EDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDLKESTK 202
             LP     YA++  AV++Q+     +T       + +++E  WG  + M L +L + ++
Sbjct: 110 ASLPYGWSRYAQFSLAVVNQIH--TRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSR 169

Query: 203 GFILNDTLIIEVKINV 212
           G+++NDT+++E ++ V
Sbjct: 170 GYLVNDTVLVEAEVAV 181

BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q9M2I9 (MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis thaliana OX=3702 GN=At3g58270 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 46/133 (34.59%), Postives = 71/133 (53.38%), Query Frame = 0

Query: 87  NHKYTWSINNFSQLPHNTTKFSDPF----TKLR-LDYPKTKNGF--FSLYLAFDGLEDLP 146
           ++K+TW I NFS    +   +SD F     K R L +PK  NG    SLYLA  G E LP
Sbjct: 6   DNKFTWVIKNFSS-QQSRKNYSDEFFVDGCKWRLLAFPK-GNGVEKLSLYLAVAGSEFLP 65

Query: 147 QTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDLKESTKGFIL 206
              + +A + F+V++QL +     R    WF+  + +  WG  +++SL  L +   GF++
Sbjct: 66  DGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSD--WGFTSMLSLKKLHDKDGGFLV 125

Query: 207 NDTLIIEVKINVI 213
           N  L I V ++V+
Sbjct: 126 NGELKIVVDVSVL 134

BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q84WU2 (Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.8e-08
Identity = 43/136 (31.62%), Postives = 76/136 (55.88%), Query Frame = 0

Query: 83  KQPTNHKYTWSINNFSQLPHNTTK-FSDPFT----KLR-LDYPKTKN-GFFSLYLAFDGL 142
           + P + K+TW+I  F++L  NT K +SD F     K R L +PK  N    S+YL     
Sbjct: 49  EDPPSLKFTWTIPMFTRL--NTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADA 108

Query: 143 EDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDLKESTK 202
            +LP     Y+++  AV++Q++    ++       + +++E  WG  + M L +L E T+
Sbjct: 109 ANLPYGWSRYSQFSLAVVNQVNN--RYSIRKETQHQFNARESDWGFTSFMPLSELYEPTR 168

Query: 203 GFILNDTLIIEVKINV 212
           G+++NDT++IE ++ V
Sbjct: 169 GYLVNDTVLIEAEVAV 180

BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q9M2J1 (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 44/137 (32.12%), Postives = 66/137 (48.18%), Query Frame = 0

Query: 84  QPTNHKYTWSINNFSQLPHNTTKFSDPFT----KLR-LDYPK---TKNGFFSLYLAFDGL 143
           Q    K++W I NFS L  +   +SD F     + R L +PK   TK+   SLYL     
Sbjct: 5   QADKKKFSWVIKNFSSL-QSEKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDVAES 64

Query: 144 EDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDLKESTK 203
           E LP   + +A++ F +++ + E     +    WF    K   WG  NL+ L +LK    
Sbjct: 65  ESLPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWF--CEKVSDWGFTNLVPLIELKAEDS 124

Query: 204 GFILNDTLIIEVKINVI 213
           GF++   L I V+I V+
Sbjct: 125 GFLVKGELKIVVEIEVL 138

BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A1S3CQ20 (uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.2e-48
Identity = 108/209 (51.67%), Postives = 140/209 (66.99%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           + D KMR F A K EWG EKL+ L +F+ ASNGFLVDDCC FGVDIFV   +  +G+V S
Sbjct: 133 VQDEKMRQFSATKREWGIEKLLPLNTFSDASNGFLVDDCCVFGVDIFVMNCNVEKGEVFS 192

Query: 81  LVKQPTNHKYTWSINNFSQL------PHNTTKFSDPFTKLRLDYP----KTKNGFFSLYL 140
           L+KQP N+KYTW ++NFS+L        N+ +  + + K+RL +P    + K GFFS+YL
Sbjct: 193 LIKQPNNYKYTWKLDNFSKLLDCSFWECNSFRVENCWWKIRL-FPSGDWQAKPGFFSMYL 252

Query: 141 AFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEY--AWGTLNLMSLC 200
               L   P+ ++VY EYE AVLSQL+ V P   TY+CWF+    E     G  N MSL 
Sbjct: 253 MLSNLIAHPKGAQVYVEYEMAVLSQLEAVPPVKETYTCWFKSGCIEIYKGCGASNFMSLS 312

Query: 201 DLKESTKGFILNDTLIIEVKINVISTWKE 218
           DLKE TKG+++NDTL++EVKINVIST K+
Sbjct: 313 DLKERTKGYLVNDTLVVEVKINVISTIKK 340

BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 3.9e-45
Identity = 105/197 (53.30%), Postives = 129/197 (65.48%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           + DGK+R FHA+K EWGFEKL+SL +FN +SNGFLVDDCCAFGVDIFV K D  +G+ LS
Sbjct: 152 VLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKCD-GKGEALS 211

Query: 81  LVKQPTNHKYTWSINNFSQLPHNTTKFSDPFTKLRLDYPKTKNGFFSLYLAFDGLEDLPQ 140
           L+KQP N+KYTW  NNFSQL  N      P        PK    + SL+L  + L++LPQ
Sbjct: 212 LIKQPKNNKYTWKTNNFSQLDENMKMSLYP-----KGSPKASPDYLSLFLRCESLKELPQ 271

Query: 141 TSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDLKESTKGFILN 200
             +VYAE+E AVLS+             WFE    +   G  + MSL DL E TKG+I +
Sbjct: 272 GCRVYAEFEIAVLSKY------------WFEFG--DLGLGFPDFMSLRDLNEVTKGYICD 328

Query: 201 DTLIIEVKINVISTWKE 218
           DTLI+EVKINV+ST KE
Sbjct: 332 DTLIVEVKINVVSTLKE 328

BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.3e-44
Identity = 105/208 (50.48%), Postives = 136/208 (65.38%), Query Frame = 0

Query: 24  GKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLSLVK 83
           GK+R FHA+KAEWGFEKLISL +FN +SNGF+V DCC FGVD+ V K D  +G+V+S +K
Sbjct: 89  GKVRRFHAMKAEWGFEKLISLDTFNDSSNGFVVGDCCGFGVDVVVMKCD-GKGEVVSFIK 148

Query: 84  QPTNHKYTWSINNFSQLPHNTTKFSDPFT------KLRLDYP----KTKNGFFSLYLAFD 143
           +P +HKYTW   NFSQL     + SDPFT      KL L YP    K K GF SLYL+++
Sbjct: 149 EPKSHKYTWKTKNFSQLDKKFYE-SDPFTVEGYRWKLWL-YPKGSSKAKTGFLSLYLSYN 208

Query: 144 GLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKE--YAWGTLNLMSLCDLK 203
             E++PQ S+VY EYE               +++CWF     E    WG  N +SL DL 
Sbjct: 209 SYEEIPQGSQVYVEYE--------------DSHNCWFGFGGVESGRGWGHPNFLSLRDLN 268

Query: 204 ESTKGFILNDTLIIEVKINVISTWKEFL 220
           E T+GFI++DT+I+EVKINV+ST K+ +
Sbjct: 269 EPTEGFIVDDTIIVEVKINVVSTLKKIV 279

BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A6J1CZ69 (ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=LOC111015609 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.1e-38
Identity = 100/198 (50.51%), Postives = 124/198 (62.63%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           + D K+R FH+I+ EW FEKLISL +FN +SNGFLV DCCAFGVDI VKK D  +G+V+S
Sbjct: 116 VQDEKVRRFHSIQTEWEFEKLISLETFNDSSNGFLVGDCCAFGVDIVVKKCD-GKGEVVS 175

Query: 81  LVKQPTNHKYTWSINNFSQLPHNTTKFSDPFTKLRLDYPKTKNGFFSLYLAFDGLEDLPQ 140
            +K+P N++YTW  NNFSQL  N  + SDPFT                Y  F   ++LPQ
Sbjct: 176 FIKEPKNNEYTWKTNNFSQLDKNMYE-SDPFT-------------VEGYRCF---KELPQ 235

Query: 141 TSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDLKESTKGFILN 200
            S+VY E+E AVLS+             WFE    +   G  N MSL DL E TKG+I +
Sbjct: 236 GSQVYTEFEIAVLSKY------------WFEFG--DLGLGFRNFMSLRDLNEVTKGYICD 281

Query: 201 DTLIIEVKINVISTWKEF 219
           DTLI+EVKINV+ST K F
Sbjct: 296 DTLIVEVKINVVSTLKLF 281

BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A6J1CX50 (uncharacterized protein LOC111015613 OS=Momordica charantia OX=3673 GN=LOC111015613 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.7e-37
Identity = 103/237 (43.46%), Postives = 133/237 (56.12%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           I DGK R FH++K EWGFEKLI L  FN ASNG LV DCCAFGVDIFVKK D  +G+  S
Sbjct: 157 IQDGKFRRFHSMKTEWGFEKLIPLEYFNDASNGLLVGDCCAFGVDIFVKKCDGGKGEDFS 216

Query: 81  LVKQPTNHKYTWSINNFSQLPHNTTKFSDPFTKLRLD-----YPKTKNGFFSLYLAFDGL 140
           + KQP ++KYTW INNF Q+P      SDPFT    +     YPK ++G  SLY+ FD  
Sbjct: 217 ITKQPKDNKYTWKINNFPQIPDENFYQSDPFTINNYNWRMCLYPK-RDGPLSLYMIFDSS 276

Query: 141 EDLPQTSKV-YAEYE--------------FAVLSQLDEVA-------------------P 200
           +++PQ S+V  A Y               + V++  D ++                    
Sbjct: 277 KEIPQGSEVKLALYPNGNEKRNGSGHISLYLVMAGNDILSTVSGVNVVFTLLVYDKLRDK 336

Query: 201 FTRTYSCWFELDSKEYAWGTLNL-MSLCDLKESTKGFILNDTLIIEVKINVISTWKE 218
           +       + +  +E + G  N+ MSL DLK  TKGFI NDTLI+EVK+N IST K+
Sbjct: 337 YLTVQGKGWVVGGEENSSGISNIVMSLSDLKNPTKGFISNDTLIVEVKMNAISTLKK 392

BLAST of Sed0009732 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-24
Identity = 65/201 (32.34%), Postives = 105/201 (52.24%), Query Frame = 0

Query: 20  LITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFV-KKGDEWEGDV 79
           LI  G  R FH++K EWGF+K I   +F+ ASNG+L++D C FG D+FV K+     G+ 
Sbjct: 105 LILQGNERRFHSVKREWGFDKFIPTGTFSDASNGYLMEDTCMFGADVFVSKERRSGRGEC 164

Query: 80  LSLVKQPTNHKYTWSINNFSQL---PHNTTKFSDPFTKLRLD-YPK-TKNG---FFSLYL 139
           LS++K  T+ K+ W I NFS+L    +++  F     K +++ YP  TK G     S+YL
Sbjct: 165 LSMIKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYL 224

Query: 140 AFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDL 199
                E +   +K++ E+   +  QL +        + WF   S E+ W  +  +S+   
Sbjct: 225 TLVDPETISDGTKIFVEFTIRIFDQL-QGRHIAGKVTKWFSRSSSEHGW--VKYVSMVYF 284

Query: 200 KESTKGFILNDTLIIEVKINV 212
            +   G +L D  ++E  + V
Sbjct: 285 TQPNSGLLLKDVCLVEADVCV 302

BLAST of Sed0009732 vs. TAIR 10
Match: AT3G20360.1 (TRAF-like family protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-19
Identity = 72/212 (33.96%), Postives = 102/212 (48.11%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVD-DCCAFGVDIFVKKGDEWEGDVL 80
           I D  +  F AIK  WGF K++ L +FN   NG+L D D C FGVD+ +    E + +V 
Sbjct: 155 IQDTDVWRFSAIKRMWGFSKVLPLITFNNLKNGYLYDVDHCEFGVDVIIPPFYE-KSEVF 214

Query: 81  SLVKQPTNHKYTWSINNFSQLPHNTTKFSDPFT------KLRLDYPKTKNGF-------F 140
           S+ K   + ++TW I  +S LP  T   S+ F        LR+     KNGF        
Sbjct: 215 SVTKSFPSPRFTWYIQGYSTLP--TDYLSEEFIIGGKSWNLRI----FKNGFGAFEGKNL 274

Query: 141 SLYLAFDGLEDLPQT--SKVYAEYEFAVLSQLDEVAPFT--RTYSCWFELDSKEYAWGTL 200
           SLYL     E L      KVY   +  V +Q    +     R    WF    +   WG  
Sbjct: 275 SLYLNLGPQELLKAKPYDKVYVRAKLRVPNQFGSQSNLVLERPLDNWF--SPQTIGWGYA 334

Query: 201 NLMSLCDLKESTKGFILNDTLIIEVKINVIST 215
           + M L DL+ S+KGF++ND L+++V +  IS+
Sbjct: 335 DFMPLSDLRNSSKGFLVNDMLVVQVAMEEISS 357

BLAST of Sed0009732 vs. TAIR 10
Match: AT5G26260.1 (TRAF-like family protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-16
Identity = 57/203 (28.08%), Postives = 106/203 (52.22%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           +TDG ++ ++  K EWGF +LISL +F  A+ G+LV D  +FG +IF+    E + + ++
Sbjct: 147 VTDGTVKRYNDAKKEWGFTQLISLPTFYNANEGYLVQDTASFGAEIFIVNPTE-KQEKVT 206

Query: 81  LVKQPTNHKYTWSINNFSQLPHNTTKFSDPF----TKLRLDY-PKTKNG----FFSLYLA 140
            +  P ++ +TW I  FS L  +   +SD F       RL + PK   G       ++L 
Sbjct: 207 FISNPPDNVFTWKILRFSTL-EDKFYYSDDFLVGDRYWRLGFNPKGSGGGRPHALPIFLY 266

Query: 141 FDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYS-CWFELDSKEYAWGTLNLMSLCDL 200
             G +     +  +      + +Q    +   + YS  W+ + S +Y  G  N++ + +L
Sbjct: 267 AQGHKANAVVTNTWGAVNLRLKNQ--RSSNHKQLYSAAWYPIRS-DYGVGVNNIILMSEL 326

Query: 201 KESTKGFILNDTLIIEVKINVIS 214
           K+++KG+++ND +I E ++  +S
Sbjct: 327 KDASKGYMVNDAIIFEAEMVKVS 344

BLAST of Sed0009732 vs. TAIR 10
Match: AT3G20370.1 (TRAF-like family protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 58/209 (27.75%), Postives = 103/209 (49.28%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVD-DCCAFGVDIFVKKGDEWEGDVL 80
           I D  +  F   K  WGF +++ + +F   + G+L D D C FGVD+ +    E + ++ 
Sbjct: 172 IQDTDVWKFSVFKTMWGFSQVLPIDTFKDPTKGYLYDGDHCEFGVDVTMPSLYE-KSELF 231

Query: 81  SLVKQPTNHKYTWSINNFSQLPHNTTKFSDPFT------KLRLDYPKTKNG---FFSLYL 140
           S+ +   N ++TW+I  FS L  N +  S+ F+       ++++      G     S+YL
Sbjct: 232 SVTENFLNPRFTWTIRGFSTLLKN-SYLSEVFSIGGRSWNIQINPSGLGTGEGKALSMYL 291

Query: 141 AFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDS-KEYAWGTLNLMSLCD 200
             +  E      K+Y   +   L+QL+ ++   R    W+      EY+WG    +    
Sbjct: 292 GLNVNEIFRPYEKIYVRAKLRALNQLN-LSNIERELDIWYNGPGYGEYSWGFPEFIYFPY 351

Query: 201 LKESTKGFILNDTLIIEVKINVISTWKEF 219
           L +S+KGF+ ND L+++V++  IS+ K F
Sbjct: 352 LTDSSKGFVKNDVLMVQVEMEAISSTKYF 377

BLAST of Sed0009732 vs. TAIR 10
Match: AT5G26280.1 (TRAF-like family protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14
Identity = 56/203 (27.59%), Postives = 102/203 (50.25%), Query Frame = 0

Query: 21  ITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLS 80
           +TDG ++ ++  K EWGF +LI  ++F  A+ G+L  D  +FG +IF+ K  + + + ++
Sbjct: 146 VTDGLVKRYNNAKKEWGFGQLIPRSTFYNANEGYLDQDTGSFGAEIFIVKPAQ-QQEKVT 205

Query: 81  LVKQPTNHKYTWSINNFSQLPHNTTKFSDPF----TKLRLDY-PKTKNG----FFSLYLA 140
            +  P N+ +TW I  FS L  +   +SD F       RL + PK   G       ++L 
Sbjct: 206 FISNPPNNVFTWKILRFSTL-EDKFYYSDDFLVEDRYWRLGFNPKGDGGGRPHALPIFLF 265

Query: 141 FDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYS-CWFELDSKEYAWGTLNLMSLCDL 200
             G +     +  +      + +Q        + YS  W+ + S  Y  G  N++ L DL
Sbjct: 266 AQGHKANAVATNTWGAVNLRLKNQ--RSTNHRQIYSAAWYPIGS-GYGVGVNNIILLADL 325

Query: 201 KESTKGFILNDTLIIEVKINVIS 214
            +++KG+++ND +I E ++  +S
Sbjct: 326 NDASKGYLVNDAIIFEAEMVKVS 343

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875772.15.0e-5557.35uncharacterized protein LOC120068142 [Benincasa hispida][more]
XP_031742213.18.9e-5253.08MATH domain and coiled-coil domain-containing protein At3g58340 [Cucumis sativus... [more]
KAE8648447.18.9e-5253.08hypothetical protein Csa_008888 [Cucumis sativus][more]
XP_038874970.12.0e-4853.85uncharacterized protein LOC120067490 [Benincasa hispida][more]
XP_008465935.14.6e-4851.67PREDICTED: uncharacterized protein LOC103503506 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Q9M2J63.3e-0933.33MATH domain and coiled-coil domain-containing protein At3g58200 OS=Arabidopsis t... [more]
Q9FPT17.4e-0931.62Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 ... [more]
Q9M2I92.2e-0834.59MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis t... [more]
Q84WU22.8e-0831.62Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 ... [more]
Q9M2J11.2e-0632.12MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A1S3CQ202.2e-4851.67uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=... [more]
A0A6J1CZF73.9e-4553.30uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1CX473.3e-4450.48probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX... [more]
A0A6J1CZ692.1e-3850.51ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1CX506.7e-3743.46uncharacterized protein LOC111015613 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
Match NameE-valueIdentityDescription
AT3G17380.11.7e-2432.34TRAF-like family protein [more]
AT3G20360.12.8e-1933.96TRAF-like family protein [more]
AT5G26260.12.9e-1628.08TRAF-like family protein [more]
AT3G20370.11.1e-1527.75TRAF-like family protein [more]
AT5G26280.12.1e-1427.59TRAF-like family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002083MATH/TRAF domainSMARTSM00061math_3coord: 89..190
e-value: 5.2E-5
score: 32.6
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 94..211
e-value: 4.3E-8
score: 33.3
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 87..209
score: 18.140827
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 1..66
score: 9.038084
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 89..209
e-value: 1.42894E-15
score: 68.5598
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 12..79
e-value: 3.0E-10
score: 42.1
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 80..215
e-value: 1.3E-22
score: 82.2
NoneNo IPR availablePANTHERPTHR46162TRAF-LIKE FAMILY PROTEINcoord: 22..215
NoneNo IPR availablePANTHERPTHR46162:SF40UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12-LIKEcoord: 22..215
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 85..214
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 27..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0009732.1Sed0009732.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding