Sed0009722 (gene) Chayote v1

Overview
NameSed0009722
Typegene
OrganismSechium edule (Chayote v1)
DescriptionF-box protein At3g07870-like
LocationLG06: 3189472 .. 3190596 (-)
RNA-Seq ExpressionSed0009722
SyntenySed0009722
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGGAGAAGGAACATAAATTCAGAGCTTTCAACAGACATTATTCAATTGATATTCTCAAAATTGAATAATTTCCTCAATTTGTGCAATTGTAGGGCTGTTTGTAAAGCATGGAACAAACTGGTTTTAGATTGTAAGTCCTATGATTATTCAAAAGCTTCAATTAATTCCAATCTTTTTTGTGCCCAAATCTCTCCTTCTAGTTGTGAGTTCCATTGTGTGTATTTCAATCCTAAACATTTGGATAGGACTGAAGTGATTGGGTCATTTAGCATCAATCCATGTTGCAAGAACATTAAGATCTTCAATTCTTGCAATGGTTTACTCCTATGTTATCTTTTCCTTCCATCCATTCCTCCTACGAATCGCAATAAGGTTTGCGTATTGAATCCGGTCACAAACGAGTACATCAAAGTTTTCTTCCAAAAAAAAGATATAGATCACTATTATTATGCATTTGGCTTTGCTCTCAATTCAAAGTGCTACAAAATTATAAGATACTCAATTATAAACAAGAACAATTCTCGCATTGTATCCTTGCAACTACGAAAGGTTTGCATTCATGCATCTACGGCCAATAGCCATGGCCAATGGACCCGCCCTAAGCCTAGGCCCTTTTTGCTACAAGGTCAAGGAACTTATTTCAATGGAGCTCTCTATTGGGTTGGAAAAGTTTATAATCCACCCGTCGCTAAACATGTCGTAATTCGTTTAGATTTAGAAGACGAAAAGTTTAAAGAAATTTCATTTCCTCAATTTGAGAACTCGCATGTGAGGTGGCCCTTTAATTGCTTCTTGTGGTTGTTGAATGATGGTCTTTATTTAACCATTCAAATGTCAATTTTGGATCATTATCAAGTGTGGAAGATGGAAGAAGATTTTTCATGGATTAAAGCATTTGTTGTTTGTCGCAACCAGCTGAACAGCTATAATAGCAAAACGTTACCAAACCTTCGACCCTCTAAGATTACCGAAGATGGGGAGATCTTATGTTTATACAAATCATCCAAACAATTCTTGACGTCCCAAAATGATACACTGGTTTGTTGCTTGAAGCTTAACCAAATTATTAATTGCTTCAACTTTGATCCACTCCACAAGATTTTGGGAGGAGATTTGTGA

mRNA sequence

ATGAGTTGGAGAAGGAACATAAATTCAGAGCTTTCAACAGACATTATTCAATTGATATTCTCAAAATTGAATAATTTCCTCAATTTGTGCAATTGTAGGGCTGTTTGTAAAGCATGGAACAAACTGGTTTTAGATTGTAAGTCCTATGATTATTCAAAAGCTTCAATTAATTCCAATCTTTTTTGTGCCCAAATCTCTCCTTCTAGTTGTGAGTTCCATTGTGTGTATTTCAATCCTAAACATTTGGATAGGACTGAAGTGATTGGGTCATTTAGCATCAATCCATGTTGCAAGAACATTAAGATCTTCAATTCTTGCAATGGTTTACTCCTATGTTATCTTTTCCTTCCATCCATTCCTCCTACGAATCGCAATAAGGTTTGCGTATTGAATCCGGTCACAAACGAGTACATCAAAGTTTTCTTCCAAAAAAAAGATATAGATCACTATTATTATGCATTTGGCTTTGCTCTCAATTCAAAGTGCTACAAAATTATAAGATACTCAATTATAAACAAGAACAATTCTCGCATTGTATCCTTGCAACTACGAAAGGTTTGCATTCATGCATCTACGGCCAATAGCCATGGCCAATGGACCCGCCCTAAGCCTAGGCCCTTTTTGCTACAAGGTCAAGGAACTTATTTCAATGGAGCTCTCTATTGGGTTGGAAAAGTTTATAATCCACCCGTCGCTAAACATGTCGTAATTCGTTTAGATTTAGAAGACGAAAAGTTTAAAGAAATTTCATTTCCTCAATTTGAGAACTCGCATGTGAGGTGGCCCTTTAATTGCTTCTTGTGGTTGTTGAATGATGGTCTTTATTTAACCATTCAAATGTCAATTTTGGATCATTATCAAGTGTGGAAGATGGAAGAAGATTTTTCATGGATTAAAGCATTTGTTGTTTGTCGCAACCAGCTGAACAGCTATAATAGCAAAACGTTACCAAACCTTCGACCCTCTAAGATTACCGAAGATGGGGAGATCTTATGTTTATACAAATCATCCAAACAATTCTTGACGTCCCAAAATGATACACTGGTTTGTTGCTTGAAGCTTAACCAAATTATTAATTGCTTCAACTTTGATCCACTCCACAAGATTTTGGGAGGAGATTTGTGA

Coding sequence (CDS)

ATGAGTTGGAGAAGGAACATAAATTCAGAGCTTTCAACAGACATTATTCAATTGATATTCTCAAAATTGAATAATTTCCTCAATTTGTGCAATTGTAGGGCTGTTTGTAAAGCATGGAACAAACTGGTTTTAGATTGTAAGTCCTATGATTATTCAAAAGCTTCAATTAATTCCAATCTTTTTTGTGCCCAAATCTCTCCTTCTAGTTGTGAGTTCCATTGTGTGTATTTCAATCCTAAACATTTGGATAGGACTGAAGTGATTGGGTCATTTAGCATCAATCCATGTTGCAAGAACATTAAGATCTTCAATTCTTGCAATGGTTTACTCCTATGTTATCTTTTCCTTCCATCCATTCCTCCTACGAATCGCAATAAGGTTTGCGTATTGAATCCGGTCACAAACGAGTACATCAAAGTTTTCTTCCAAAAAAAAGATATAGATCACTATTATTATGCATTTGGCTTTGCTCTCAATTCAAAGTGCTACAAAATTATAAGATACTCAATTATAAACAAGAACAATTCTCGCATTGTATCCTTGCAACTACGAAAGGTTTGCATTCATGCATCTACGGCCAATAGCCATGGCCAATGGACCCGCCCTAAGCCTAGGCCCTTTTTGCTACAAGGTCAAGGAACTTATTTCAATGGAGCTCTCTATTGGGTTGGAAAAGTTTATAATCCACCCGTCGCTAAACATGTCGTAATTCGTTTAGATTTAGAAGACGAAAAGTTTAAAGAAATTTCATTTCCTCAATTTGAGAACTCGCATGTGAGGTGGCCCTTTAATTGCTTCTTGTGGTTGTTGAATGATGGTCTTTATTTAACCATTCAAATGTCAATTTTGGATCATTATCAAGTGTGGAAGATGGAAGAAGATTTTTCATGGATTAAAGCATTTGTTGTTTGTCGCAACCAGCTGAACAGCTATAATAGCAAAACGTTACCAAACCTTCGACCCTCTAAGATTACCGAAGATGGGGAGATCTTATGTTTATACAAATCATCCAAACAATTCTTGACGTCCCAAAATGATACACTGGTTTGTTGCTTGAAGCTTAACCAAATTATTAATTGCTTCAACTTTGATCCACTCCACAAGATTTTGGGAGGAGATTTGTGA

Protein sequence

MSWRRNINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQISPSSCEFHCVYFNPKHLDRTEVIGSFSINPCCKNIKIFNSCNGLLLCYLFLPSIPPTNRNKVCVLNPVTNEYIKVFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSRIVSLQLRKVCIHASTANSHGQWTRPKPRPFLLQGQGTYFNGALYWVGKVYNPPVAKHVVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEEDFSWIKAFVVCRNQLNSYNSKTLPNLRPSKITEDGEILCLYKSSKQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGGDL
Homology
BLAST of Sed0009722 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 200.7 bits (509), Expect = 2.3e-47
Identity = 150/396 (37.88%), Postives = 199/396 (50.25%), Query Frame = 0

Query: 5   RNINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQ 64
           +  NSEL  DI+QLIFSKL  F NL  CR V   WN LVL CK +D S  SI++  F   
Sbjct: 10  KTTNSELPPDILQLIFSKL-PFFNLPTCRLVSATWNNLVLSCK-FDPS-ISISNLFFAHF 69

Query: 65  ISPSSCEFHCVYFNPKHLDRTEVIGSFSINP-----CCKNIKIFNSCNGLLLCYLFLPSI 124
            S      HCV  +P+HL+    + SF+ +P      CK I I NSC+GL+   +     
Sbjct: 70  YSCRDRNLHCVDLDPQHLEGMSTVASFTFHPNVSSGSCK-ISIINSCSGLISLLITKRRR 129

Query: 125 PPTNRNKVCVLNPVTNEYIKV--FFQKKD-IDHYYYAFGFALNSKCYKIIRYSIINKNNS 184
                  VCVLNP+TNEY K+  F  K D +  Y+Y  GF+  +K YK+ R   +     
Sbjct: 130 RGHRPGVVCVLNPMTNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYV----- 189

Query: 185 RIVSLQLRKVCIHASTANSHGQWTRPKPRP-FLLQGQGTYFNGALYWVGKVYNPPVA-KH 244
                   +  +      +  +WT     P FL +  G YFNG LYWVG    P      
Sbjct: 190 ------CHEFIVEIFAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGGQQLPNAGLSD 249

Query: 245 VVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEED 304
           V+ RLDLED+KFK+ISFP   +    +P   ++ + ND LYLT+     + Y VWKMEED
Sbjct: 250 VIYRLDLEDDKFKQISFPLDGDDEGDFP---YIGVYNDTLYLTLCCGDFE-YHVWKMEED 309

Query: 305 FSWIKAFVVCRNQLNSYNSKTLPNLRP-------SKITEDGEILCL-----------YKS 364
           FSWIK FV+   + N ++S  LP   P        K  EDG ILCL              
Sbjct: 310 FSWIKEFVLALPE-NVHHS--LPRHHPIGYCLQLIKACEDGNILCLCAGLYLILYDPKTE 369

Query: 365 SKQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
           + + LT Q+  +   + + Q I+ FNF+ LH IL G
Sbjct: 370 TTELLTDQDFEIKKHMWVYQ-IDSFNFNSLHNILAG 382

BLAST of Sed0009722 vs. NCBI nr
Match: XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])

HSP 1 Score: 198.0 bits (502), Expect = 1.5e-46
Identity = 136/387 (35.14%), Postives = 195/387 (50.39%), Query Frame = 0

Query: 6   NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
           N   E+  ++I LIFSKL  F+NL +CR VCKAW+ +VL  K   +   SI+++LF A  
Sbjct: 12  NKGREIPAELIWLIFSKL-PFVNLPSCRLVCKAWSDVVLTGKL--HPSISISNHLFLAHD 71

Query: 66  SPSSCEFHCVYFNPKHLDRTEVIGSFSINP----CCKNIKIFNSCNGLLLCYL--FLPSI 125
                   C++ +PK+L     +  F  +P        I I N CNGLL C        +
Sbjct: 72  YLFDPNLQCLHLDPKYLGGMCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTKM 131

Query: 126 PPTNRNKVCVLNPVTNEYIK--VFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSR 185
           PP    +VC+LNP+TNEY K  +    KD  +Y Y FGF+  +K YK++R+         
Sbjct: 132 PPYENVEVCILNPMTNEYFKPPISNASKDRWYYCYRFGFSPKTKQYKLVRF--------- 191

Query: 186 IVSLQLRKVCIHAST--ANSHGQWTRPKPRPFLLQGQGTYFNGALYWVGKVYNPPVAKHV 245
             S     + +   T   N    +    P    ++    YFNG+LYW+GK    P   +V
Sbjct: 192 FYSCDKAAILLETFTFGTNCKSTYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHPT--NV 251

Query: 246 VIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEEDF 305
           + RLD+E E+ +EISFPQ           C + + N  LYLT+       Y VWKMEEDF
Sbjct: 252 LYRLDIEKEELQEISFPQSGGC-------CSIGVFNGSLYLTLAQGRYHAYHVWKMEEDF 311

Query: 306 SWIKAFVVCRNQLNSYNSKTLPN-LRPSKITEDGEILC--------LYKSSKQFLTSQND 365
           SW KAF V   ++  ++ +   + L+  +  +DG+ILC        LY S  Q + S   
Sbjct: 312 SWTKAFDVLLPKIYVHHRRLYDSQLQLIRACDDGKILCLISGLDLILYNSKTQRMESLTY 371

Query: 366 TLVCCLKLNQIINCFNFDPLHKILGGD 374
             +   K+++ I+ FNFD LHKIL GD
Sbjct: 372 QHLNIKKVHR-IDSFNFDSLHKILTGD 376

BLAST of Sed0009722 vs. NCBI nr
Match: XP_038878453.1 (F-box protein At3g07870-like [Benincasa hispida] >XP_038878454.1 F-box protein At3g07870-like [Benincasa hispida])

HSP 1 Score: 193.0 bits (489), Expect = 4.7e-45
Identity = 150/402 (37.31%), Postives = 205/402 (51.00%), Query Frame = 0

Query: 6   NINSELSTDII--QLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCA 65
           N N E+  D I  QLIFSKL + ++L  CR VCK+WN +V+            +SNLF A
Sbjct: 18  NKNWEIPPDHILHQLIFSKL-SIVDLQACRQVCKSWNNIVV----------QFDSNLFFA 77

Query: 66  QISPSSCEFHCVYFNPKHLDRTEVIGSFSINP--CCKNIKIFNSCNGLLLC---YLFLPS 125
           Q SP S   HC+ F+PKH+     + SF+ +P     + KI   C+GLLLC   +     
Sbjct: 78  QTSPDSRNIHCMDFDPKHMGAMNSLASFTFHPKYSSASSKILCCCHGLLLCSFRFFKFYD 137

Query: 126 IPPTNRNKVCVLNPVTNEYIKVFFQKKD-IDHYYYAFGFALNSKCYKIIRY----SIINK 185
           +   +R K+C+LNP TNEY+ V     +  D+Y YAFGF+LN+K +KI+R+    S    
Sbjct: 138 LIEYSRTKICILNPFTNEYLVVSSDTGNRHDNYSYAFGFSLNTKQFKIVRFTYKHSSFQP 197

Query: 186 NNSRIVSLQLRKVCIHASTANSHGQWTRPKPRPFL---LQGQGT-YFNGALYWVGKVYNP 245
           +++ I       +C             R +P  FL   +Q  G  YFNGALYWVG     
Sbjct: 198 SSTSIEIYAFETLC------------PRLRPLGFLPTSIQTDGAYYFNGALYWVGTDQQL 257

Query: 246 PVAKH--VVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQ 305
            +  H  V+  LDLED K  + S PQ    H ++    F   LN  LYLT  +   D YQ
Sbjct: 258 LLKAHKDVIYCLDLEDYKLNQCSLPQ----HNQFRLAYFFGALNGALYLT-TLENEDQYQ 317

Query: 306 VWKMEED-FSWIKAFVVCRNQLN-----SYNSKTLPNLRPSKITEDGEILCLY------- 365
           +WKME+D FS I  FV+ +  L        +S++L NL+P KI EDG+ LCL        
Sbjct: 318 MWKMEQDVFSCIILFVLPKLNLRFSKHLPQHSRSLINLQPIKICEDGKFLCLLGGLVFLL 377

Query: 366 ----KSSKQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
                 + Q LT Q+  +    K+   I  FNF+ LH IL G
Sbjct: 378 CDPNTGTTQVLTDQDVEIEKHFKVFP-IETFNFNSLHNILLG 390

BLAST of Sed0009722 vs. NCBI nr
Match: XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])

HSP 1 Score: 187.2 bits (474), Expect = 2.6e-43
Identity = 141/395 (35.70%), Postives = 201/395 (50.89%), Query Frame = 0

Query: 4   RRNINSELSTD-IIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFC 63
           R++ +SEL  D IIQ+I SK+  F NL +CR VCKAWN LVL CK   +    + S+L  
Sbjct: 10  RKSSDSELPPDNIIQVILSKVPLF-NLPSCRLVCKAWNNLVLTCK---FDPPLLISSLSL 69

Query: 64  AQISPSSCEFHCVYFNPKHLDRTEVIGSFSINP--CCKNIKIFNSCNGLLLCYLFLPSIP 123
           A   PS    +C+ FN K+L+    + SF+ +P     +I I NSCNGLL   +      
Sbjct: 70  AYDCPSR-NLYCMDFNLKYLEGMSSVVSFTFHPKFFTSSISIINSCNGLLSLLISKRKSG 129

Query: 124 PTNRNKVCVLNPVTNEYIKVFFQKKDIDH------YYYAFGFALNSKCYKIIRYSIINKN 183
                 +C+LNP+TNEY K F  +K   H      Y Y  GF+  +K YKI R S +   
Sbjct: 130 SPISYVLCILNPMTNEYFK-FPAEKSKTHCCCGRPYSYGLGFSPETKQYKIARTSFLRDE 189

Query: 184 NSRIVSLQLRKVCIHASTANSHGQWTRPKPRPFL-LQGQGTYFNGALYWVGKVYNPPVAK 243
           ++  V +             +  +WT     P L ++  G YFNG LYW      P  + 
Sbjct: 190 STTSVEI---------FAFGTTREWTPVGVLPSLVVEDHGVYFNGGLYWTVDELQPRDSN 249

Query: 244 HVVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDH-YQVWKME 303
           + + RLD+E+EK ++IS P +   H       F  + +  LYLT     +D+ YQVWKME
Sbjct: 250 NAIYRLDIENEKLEKISCPHYGGGHF------FFGVFDGTLYLTTYTGTVDNIYQVWKME 309

Query: 304 EDFSWIKAFVVCRNQLNSYNSKTLP----NLRPSKITEDGEILCLY----------KSSK 363
           E+ SWIKAFV+ R +   +     P     L+P K+ EDG+ILCL           K+ +
Sbjct: 310 ENLSWIKAFVLSRPENLRHPEHDQPWGVSQLQPIKVCEDGKILCLLAGFLLILYDPKTKR 369

Query: 364 -QFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
            + LT+Q+      L ++Q I+  NF+ L  IL G
Sbjct: 370 VKILTNQDVETERHLHVHQ-IDSSNFNSLPNILAG 382

BLAST of Sed0009722 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 7.1e-41
Identity = 135/394 (34.26%), Postives = 193/394 (48.98%), Query Frame = 0

Query: 6   NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
           N  SEL  D++QLIFSKL  F NL  CR V   WN L+  CK +D S  SI+   F    
Sbjct: 11  NKRSELPPDVLQLIFSKL-PFFNLPTCRLVSTTWNNLISSCK-FDPS-ISISHLFFARFY 70

Query: 66  SPSSCEFHCVYFNPKHLDRTEVIGSFSINP-----CCKNIKIFNSCNGLLLCYLFLPSIP 125
           S      HCV F+P+H +    + SF+ +P      C+ I I NSC+GL+   +      
Sbjct: 71  SSRHPNLHCVEFDPQHAEGMSTVASFAFHPDLSSGSCR-ITIINSCSGLISLIINKRRRR 130

Query: 126 PTNRNKVCVLNPVTNEYIKVFFQKKD---IDHYYYAFGFALNSKCYKIIRYSIINKNNSR 185
               + VCVLNP+TNEY K+   +     + +Y Y  GF+  +  YK+ R    +     
Sbjct: 131 GHRLDLVCVLNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHD---- 190

Query: 186 IVSLQLRKVCIHASTANSHGQWTRPKPRP-FLLQGQGTYFNGALYWVG--KVYNPPVAKH 245
                  +  +      +  +WT     P FL +  G Y NG LYWVG  K+ N  ++ +
Sbjct: 191 -------EFIVDIFAFGTSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDY 250

Query: 246 --VVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKME 305
             V+ RLDL+DEKF++ISFP           + ++ + N  LYLT      D Y  WKME
Sbjct: 251 TEVIYRLDLKDEKFEKISFPLDGGD------DPYIAVYNGTLYLTFCCEDFD-YHAWKME 310

Query: 306 EDFSWIKAFVVCRNQLNSYNSKTLP---NLRPSKITEDGEILCLY-----------KSSK 365
           EDFSW K FV+   +   ++ +  P    L+  K  EDG ILCLY             + 
Sbjct: 311 EDFSWSKEFVLALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTV 370

Query: 366 QFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
           + LT+Q+  +   + ++Q I  F+F+ LH IL G
Sbjct: 371 EILTNQDFEIKEAMWVHQ-IESFSFNSLHNILAG 381

BLAST of Sed0009722 vs. ExPASy TrEMBL
Match: A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 7.1e-47
Identity = 136/387 (35.14%), Postives = 195/387 (50.39%), Query Frame = 0

Query: 6   NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
           N   E+  ++I LIFSKL  F+NL +CR VCKAW+ +VL  K   +   SI+++LF A  
Sbjct: 12  NKGREIPAELIWLIFSKL-PFVNLPSCRLVCKAWSDVVLTGKL--HPSISISNHLFLAHD 71

Query: 66  SPSSCEFHCVYFNPKHLDRTEVIGSFSINP----CCKNIKIFNSCNGLLLCYL--FLPSI 125
                   C++ +PK+L     +  F  +P        I I N CNGLL C        +
Sbjct: 72  YLFDPNLQCLHLDPKYLGGMCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTKM 131

Query: 126 PPTNRNKVCVLNPVTNEYIK--VFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSR 185
           PP    +VC+LNP+TNEY K  +    KD  +Y Y FGF+  +K YK++R+         
Sbjct: 132 PPYENVEVCILNPMTNEYFKPPISNASKDRWYYCYRFGFSPKTKQYKLVRF--------- 191

Query: 186 IVSLQLRKVCIHAST--ANSHGQWTRPKPRPFLLQGQGTYFNGALYWVGKVYNPPVAKHV 245
             S     + +   T   N    +    P    ++    YFNG+LYW+GK    P   +V
Sbjct: 192 FYSCDKAAILLETFTFGTNCKSTYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHPT--NV 251

Query: 246 VIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEEDF 305
           + RLD+E E+ +EISFPQ           C + + N  LYLT+       Y VWKMEEDF
Sbjct: 252 LYRLDIEKEELQEISFPQSGGC-------CSIGVFNGSLYLTLAQGRYHAYHVWKMEEDF 311

Query: 306 SWIKAFVVCRNQLNSYNSKTLPN-LRPSKITEDGEILC--------LYKSSKQFLTSQND 365
           SW KAF V   ++  ++ +   + L+  +  +DG+ILC        LY S  Q + S   
Sbjct: 312 SWTKAFDVLLPKIYVHHRRLYDSQLQLIRACDDGKILCLISGLDLILYNSKTQRMESLTY 371

Query: 366 TLVCCLKLNQIINCFNFDPLHKILGGD 374
             +   K+++ I+ FNFD LHKIL GD
Sbjct: 372 QHLNIKKVHR-IDSFNFDSLHKILTGD 376

BLAST of Sed0009722 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.4e-41
Identity = 135/394 (34.26%), Postives = 193/394 (48.98%), Query Frame = 0

Query: 6   NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
           N  SEL  D++QLIFSKL  F NL  CR V   WN L+  CK +D S  SI+   F    
Sbjct: 11  NKRSELPPDVLQLIFSKL-PFFNLPTCRLVSTTWNNLISSCK-FDPS-ISISHLFFARFY 70

Query: 66  SPSSCEFHCVYFNPKHLDRTEVIGSFSINP-----CCKNIKIFNSCNGLLLCYLFLPSIP 125
           S      HCV F+P+H +    + SF+ +P      C+ I I NSC+GL+   +      
Sbjct: 71  SSRHPNLHCVEFDPQHAEGMSTVASFAFHPDLSSGSCR-ITIINSCSGLISLIINKRRRR 130

Query: 126 PTNRNKVCVLNPVTNEYIKVFFQKKD---IDHYYYAFGFALNSKCYKIIRYSIINKNNSR 185
               + VCVLNP+TNEY K+   +     + +Y Y  GF+  +  YK+ R    +     
Sbjct: 131 GHRLDLVCVLNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHD---- 190

Query: 186 IVSLQLRKVCIHASTANSHGQWTRPKPRP-FLLQGQGTYFNGALYWVG--KVYNPPVAKH 245
                  +  +      +  +WT     P FL +  G Y NG LYWVG  K+ N  ++ +
Sbjct: 191 -------EFIVDIFAFGTSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDY 250

Query: 246 --VVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKME 305
             V+ RLDL+DEKF++ISFP           + ++ + N  LYLT      D Y  WKME
Sbjct: 251 TEVIYRLDLKDEKFEKISFPLDGGD------DPYIAVYNGTLYLTFCCEDFD-YHAWKME 310

Query: 306 EDFSWIKAFVVCRNQLNSYNSKTLP---NLRPSKITEDGEILCLY-----------KSSK 365
           EDFSW K FV+   +   ++ +  P    L+  K  EDG ILCLY             + 
Sbjct: 311 EDFSWSKEFVLALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTV 370

Query: 366 QFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
           + LT+Q+  +   + ++Q I  F+F+ LH IL G
Sbjct: 371 EILTNQDFEIKEAMWVHQ-IESFSFNSLHNILAG 381

BLAST of Sed0009722 vs. ExPASy TrEMBL
Match: A0A0A0KJY9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-39
Identity = 135/396 (34.09%), Postives = 197/396 (49.75%), Query Frame = 0

Query: 8   NSELSTD-IIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCA-QI 67
           NSE   D IIQ+I SK+  F NL +CR VCK+WN L+L CK         + +LF +   
Sbjct: 14  NSEFPPDNIIQVILSKVPLF-NLTSCRLVCKSWNNLILTCK--------FDPSLFLSFAY 73

Query: 68  SPSSCEFHCVYFNPKHLDRTEVIGSFSINP----CCKNIKIFNSCNGLLLCYLFLPSIPP 127
              S   +CV F+P + +    IGSF+ +P       +I I N+CNGLL   +    +  
Sbjct: 74  DCPSRTLYCVDFDPMYFEGMNSIGSFTFHPKFSTSDSSISIINACNGLLSLLISKRKLGS 133

Query: 128 TNRNKVCVLNPVTNEYIKVFFQKKDIDH------YYYAFGFALNSKCYKIIRYSIINKNN 187
            +   + +LNP+TNEY K F  +K   H      Y Y  GF   +K YKI R S     +
Sbjct: 134 VS-YVLGILNPMTNEYFK-FPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDES 193

Query: 188 SRIVSLQLRKVCIHASTANSHGQWTRPKPRPFL-LQGQGTYFNGALYWVGKVYNPPVAK- 247
           + +V +         +  ++H  WT     P L ++  G YF G LYWV    +P  +  
Sbjct: 194 TTLVEI--------FTFGSTHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSI 253

Query: 248 HVVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEE 307
             + RLDLE+EK ++IS PQ+   H       F  + +  LYLT+  +  + YQVWKM++
Sbjct: 254 SAIYRLDLENEKLEKISCPQYIGGHF------FFGVFDGTLYLTVSKN--NKYQVWKMKD 313

Query: 308 DFSWIKAFVVCR-----NQLNSYNSKTLPNLRPSKITEDGEILCLY-----------KSS 367
           +FSWIKAFV+ R     +  + +    +  L P K  EDG+ILCL              S
Sbjct: 314 NFSWIKAFVISRPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKS 373

Query: 368 KQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGGD 374
            + LT Q+  +   L ++  I+ FNF+ L  IL G+
Sbjct: 374 AEILTDQSVKVEKHLHVHH-IDAFNFNSLPSILAGN 381

BLAST of Sed0009722 vs. ExPASy TrEMBL
Match: A0A6J1HYC7 (F-box protein At3g07870-like OS=Cucurbita maxima OX=3661 GN=LOC111467985 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.2e-39
Identity = 124/387 (32.04%), Postives = 197/387 (50.90%), Query Frame = 0

Query: 10  ELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI---- 69
           EL  D+++LI SKL  +  L +CR VCK WN ++L  K YD S  S +SN   A +    
Sbjct: 14  ELIHDVVELILSKL-PYYYLPSCRLVCKTWNNVILSSK-YDLS-ISADSNFLLAHVYSNR 73

Query: 70  --SPSSCEFHCVYFNPKHLDRTEVIGSFSINPCC---KNIKIFNSCNGLLLCYLFLPSIP 129
              PS  + HC+  +P H+     + S +++        I   NSCNGLL   +   +  
Sbjct: 74  RDCPSFRDLHCLELDPDHVKGVRSVASLNLHRKYFQHSFISTINSCNGLLAFVVTKNTKR 133

Query: 130 PTNRNKVCVLNPVTNEYI---KVFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSR 189
               N V + NP+TNEY+   K  F++K + +  Y FGF   +K YK++R S ++  NS 
Sbjct: 134 WLTPNTVVIFNPMTNEYLELPKDEFKRKRL-NCSYGFGFCPRTKQYKVVRNSTVDDRNST 193

Query: 190 IVSLQLRKVCIHASTANSHGQWTRPKPRPFLLQG-QGTYFNGALYWVGKVYNPPVAKHVV 249
           + S    ++        +  +WTR +       G  G Y NG L+W+G+     +  +V+
Sbjct: 194 VHSNYKSEI----FAFGTRQEWTRIESPSCSFHGCHGAYLNGGLHWIGQ---NDLGYNVI 253

Query: 250 IRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEEDFS 309
            RL++EDEK+K+I FP  +       +  ++ + N  L+LTI M   + Y++WKME D S
Sbjct: 254 YRLNMEDEKYKQIPFPNHDG------YFPYIGVFNGALHLTISMEEYE-YRIWKMEGDGS 313

Query: 310 WIKAF--VVCRNQLNSYNSKTLPNLRPSKITEDGEILCLYKSSKQFLTS---------QN 369
           WIK+F  +V    + S++  T+  ++  K   DG+ILC++  ++  L             
Sbjct: 314 WIKSFSVIVPTKNIISFSKSTVEQIKTCK---DGKILCVWAGAQFVLYDPKTETMEKLME 373

Query: 370 DTLVCCLKLNQIINCFNFDPLHKILGG 373
           DT+V    ++  I+CFNF  L  IL G
Sbjct: 374 DTIVRYFSVHN-IDCFNFSALRDILTG 378

BLAST of Sed0009722 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 9.3e-39
Identity = 138/395 (34.94%), Postives = 186/395 (47.09%), Query Frame = 0

Query: 6   NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
           N + EL  DI+Q IFSK+  F NL  CR V + WN L+  CK +D S  SI    F    
Sbjct: 10  NKSYELPPDILQQIFSKI-PFFNLPTCRLVSRTWNNLISSCK-FDPS-TSIYHLFFARFY 69

Query: 66  SPSSCEFHCVYFNPKHLDRTEVIGSFSINP----CCKNIKIFNSCNGLLLCYLFLPSIPP 125
           S      HCV F+P+H++   ++ SF+ +P        I I NSC+GL+   +       
Sbjct: 70  SSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRG 129

Query: 126 TNRNKVCVLNPVTNEYIK---VFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSRI 185
             R+ VCVLNP+TNEY K   +  +   + +Y Y  GF+  +  YK+ R      +N  I
Sbjct: 130 QRRDVVCVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHF--AHNEFI 189

Query: 186 VSLQLRKVCIHASTANSHGQWTRPKPRP-FLLQGQGTYFNGALYWVGKVYNPPVA----- 245
           V +             +  +WT     P FL +  G YFNG LYWVG     P       
Sbjct: 190 VDI---------FAFGTSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDY 249

Query: 246 KHVVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKME 305
             VV RLDL DEKFK+IS P F           ++ + N  LYLT+     D Y VWKM+
Sbjct: 250 TGVVYRLDLNDEKFKKISIP-FGGDEP------YVGVYNGTLYLTLCCEDFD-YHVWKMK 309

Query: 306 EDFSWIKAFVVC--RNQLNSYNSKTLPN--LRPSKITEDGEILCL-----------YKSS 365
           EDFSW K FV+    N L+S +        L+  K  EDG ILCL               
Sbjct: 310 EDFSWSKEFVLALPENILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQ 369

Query: 366 KQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
            + LT Q+  +   +  +Q I  F+F+ LH  L G
Sbjct: 370 MEILTDQDFEIKEGMWFHQ-IESFSFNSLHNTLTG 381

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880514.12.3e-4737.88putative F-box protein At1g46984 [Benincasa hispida][more]
XP_022143297.11.5e-4635.14F-box/kelch-repeat protein At3g06240-like [Momordica charantia][more]
XP_038878453.14.7e-4537.31F-box protein At3g07870-like [Benincasa hispida] >XP_038878454.1 F-box protein A... [more]
XP_038883771.12.6e-4335.70putative F-box protein At1g60370 [Benincasa hispida][more]
XP_004135796.17.1e-4134.26putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CQE27.1e-4735.14F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A0A0M1M53.4e-4134.26F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... [more]
A0A0A0KJY91.9e-3934.09F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 ... [more]
A0A6J1HYC74.2e-3932.04F-box protein At3g07870-like OS=Cucurbita maxima OX=3661 GN=LOC111467985 PE=4 SV... [more]
A0A5D3CIX99.3e-3934.94Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 11..52
e-value: 3.2E-6
score: 36.7
IPR001810F-box domainPFAMPF12937F-box-likecoord: 14..46
e-value: 1.9E-6
score: 27.7
NoneNo IPR availableGENE3D1.20.1280.50coord: 1..48
e-value: 1.9E-6
score: 29.5
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 15..308
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 15..308
IPR013187F-box associated domain, type 3PFAMPF08268FBA_3coord: 214..338
e-value: 2.1E-6
score: 27.7
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 7..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0009722.1Sed0009722.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding