Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGGAGAAGGAACATAAATTCAGAGCTTTCAACAGACATTATTCAATTGATATTCTCAAAATTGAATAATTTCCTCAATTTGTGCAATTGTAGGGCTGTTTGTAAAGCATGGAACAAACTGGTTTTAGATTGTAAGTCCTATGATTATTCAAAAGCTTCAATTAATTCCAATCTTTTTTGTGCCCAAATCTCTCCTTCTAGTTGTGAGTTCCATTGTGTGTATTTCAATCCTAAACATTTGGATAGGACTGAAGTGATTGGGTCATTTAGCATCAATCCATGTTGCAAGAACATTAAGATCTTCAATTCTTGCAATGGTTTACTCCTATGTTATCTTTTCCTTCCATCCATTCCTCCTACGAATCGCAATAAGGTTTGCGTATTGAATCCGGTCACAAACGAGTACATCAAAGTTTTCTTCCAAAAAAAAGATATAGATCACTATTATTATGCATTTGGCTTTGCTCTCAATTCAAAGTGCTACAAAATTATAAGATACTCAATTATAAACAAGAACAATTCTCGCATTGTATCCTTGCAACTACGAAAGGTTTGCATTCATGCATCTACGGCCAATAGCCATGGCCAATGGACCCGCCCTAAGCCTAGGCCCTTTTTGCTACAAGGTCAAGGAACTTATTTCAATGGAGCTCTCTATTGGGTTGGAAAAGTTTATAATCCACCCGTCGCTAAACATGTCGTAATTCGTTTAGATTTAGAAGACGAAAAGTTTAAAGAAATTTCATTTCCTCAATTTGAGAACTCGCATGTGAGGTGGCCCTTTAATTGCTTCTTGTGGTTGTTGAATGATGGTCTTTATTTAACCATTCAAATGTCAATTTTGGATCATTATCAAGTGTGGAAGATGGAAGAAGATTTTTCATGGATTAAAGCATTTGTTGTTTGTCGCAACCAGCTGAACAGCTATAATAGCAAAACGTTACCAAACCTTCGACCCTCTAAGATTACCGAAGATGGGGAGATCTTATGTTTATACAAATCATCCAAACAATTCTTGACGTCCCAAAATGATACACTGGTTTGTTGCTTGAAGCTTAACCAAATTATTAATTGCTTCAACTTTGATCCACTCCACAAGATTTTGGGAGGAGATTTGTGA
mRNA sequence
ATGAGTTGGAGAAGGAACATAAATTCAGAGCTTTCAACAGACATTATTCAATTGATATTCTCAAAATTGAATAATTTCCTCAATTTGTGCAATTGTAGGGCTGTTTGTAAAGCATGGAACAAACTGGTTTTAGATTGTAAGTCCTATGATTATTCAAAAGCTTCAATTAATTCCAATCTTTTTTGTGCCCAAATCTCTCCTTCTAGTTGTGAGTTCCATTGTGTGTATTTCAATCCTAAACATTTGGATAGGACTGAAGTGATTGGGTCATTTAGCATCAATCCATGTTGCAAGAACATTAAGATCTTCAATTCTTGCAATGGTTTACTCCTATGTTATCTTTTCCTTCCATCCATTCCTCCTACGAATCGCAATAAGGTTTGCGTATTGAATCCGGTCACAAACGAGTACATCAAAGTTTTCTTCCAAAAAAAAGATATAGATCACTATTATTATGCATTTGGCTTTGCTCTCAATTCAAAGTGCTACAAAATTATAAGATACTCAATTATAAACAAGAACAATTCTCGCATTGTATCCTTGCAACTACGAAAGGTTTGCATTCATGCATCTACGGCCAATAGCCATGGCCAATGGACCCGCCCTAAGCCTAGGCCCTTTTTGCTACAAGGTCAAGGAACTTATTTCAATGGAGCTCTCTATTGGGTTGGAAAAGTTTATAATCCACCCGTCGCTAAACATGTCGTAATTCGTTTAGATTTAGAAGACGAAAAGTTTAAAGAAATTTCATTTCCTCAATTTGAGAACTCGCATGTGAGGTGGCCCTTTAATTGCTTCTTGTGGTTGTTGAATGATGGTCTTTATTTAACCATTCAAATGTCAATTTTGGATCATTATCAAGTGTGGAAGATGGAAGAAGATTTTTCATGGATTAAAGCATTTGTTGTTTGTCGCAACCAGCTGAACAGCTATAATAGCAAAACGTTACCAAACCTTCGACCCTCTAAGATTACCGAAGATGGGGAGATCTTATGTTTATACAAATCATCCAAACAATTCTTGACGTCCCAAAATGATACACTGGTTTGTTGCTTGAAGCTTAACCAAATTATTAATTGCTTCAACTTTGATCCACTCCACAAGATTTTGGGAGGAGATTTGTGA
Coding sequence (CDS)
ATGAGTTGGAGAAGGAACATAAATTCAGAGCTTTCAACAGACATTATTCAATTGATATTCTCAAAATTGAATAATTTCCTCAATTTGTGCAATTGTAGGGCTGTTTGTAAAGCATGGAACAAACTGGTTTTAGATTGTAAGTCCTATGATTATTCAAAAGCTTCAATTAATTCCAATCTTTTTTGTGCCCAAATCTCTCCTTCTAGTTGTGAGTTCCATTGTGTGTATTTCAATCCTAAACATTTGGATAGGACTGAAGTGATTGGGTCATTTAGCATCAATCCATGTTGCAAGAACATTAAGATCTTCAATTCTTGCAATGGTTTACTCCTATGTTATCTTTTCCTTCCATCCATTCCTCCTACGAATCGCAATAAGGTTTGCGTATTGAATCCGGTCACAAACGAGTACATCAAAGTTTTCTTCCAAAAAAAAGATATAGATCACTATTATTATGCATTTGGCTTTGCTCTCAATTCAAAGTGCTACAAAATTATAAGATACTCAATTATAAACAAGAACAATTCTCGCATTGTATCCTTGCAACTACGAAAGGTTTGCATTCATGCATCTACGGCCAATAGCCATGGCCAATGGACCCGCCCTAAGCCTAGGCCCTTTTTGCTACAAGGTCAAGGAACTTATTTCAATGGAGCTCTCTATTGGGTTGGAAAAGTTTATAATCCACCCGTCGCTAAACATGTCGTAATTCGTTTAGATTTAGAAGACGAAAAGTTTAAAGAAATTTCATTTCCTCAATTTGAGAACTCGCATGTGAGGTGGCCCTTTAATTGCTTCTTGTGGTTGTTGAATGATGGTCTTTATTTAACCATTCAAATGTCAATTTTGGATCATTATCAAGTGTGGAAGATGGAAGAAGATTTTTCATGGATTAAAGCATTTGTTGTTTGTCGCAACCAGCTGAACAGCTATAATAGCAAAACGTTACCAAACCTTCGACCCTCTAAGATTACCGAAGATGGGGAGATCTTATGTTTATACAAATCATCCAAACAATTCTTGACGTCCCAAAATGATACACTGGTTTGTTGCTTGAAGCTTAACCAAATTATTAATTGCTTCAACTTTGATCCACTCCACAAGATTTTGGGAGGAGATTTGTGA
Protein sequence
MSWRRNINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQISPSSCEFHCVYFNPKHLDRTEVIGSFSINPCCKNIKIFNSCNGLLLCYLFLPSIPPTNRNKVCVLNPVTNEYIKVFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSRIVSLQLRKVCIHASTANSHGQWTRPKPRPFLLQGQGTYFNGALYWVGKVYNPPVAKHVVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEEDFSWIKAFVVCRNQLNSYNSKTLPNLRPSKITEDGEILCLYKSSKQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGGDL
Homology
BLAST of Sed0009722 vs. NCBI nr
Match:
XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])
HSP 1 Score: 200.7 bits (509), Expect = 2.3e-47
Identity = 150/396 (37.88%), Postives = 199/396 (50.25%), Query Frame = 0
Query: 5 RNINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQ 64
+ NSEL DI+QLIFSKL F NL CR V WN LVL CK +D S SI++ F
Sbjct: 10 KTTNSELPPDILQLIFSKL-PFFNLPTCRLVSATWNNLVLSCK-FDPS-ISISNLFFAHF 69
Query: 65 ISPSSCEFHCVYFNPKHLDRTEVIGSFSINP-----CCKNIKIFNSCNGLLLCYLFLPSI 124
S HCV +P+HL+ + SF+ +P CK I I NSC+GL+ +
Sbjct: 70 YSCRDRNLHCVDLDPQHLEGMSTVASFTFHPNVSSGSCK-ISIINSCSGLISLLITKRRR 129
Query: 125 PPTNRNKVCVLNPVTNEYIKV--FFQKKD-IDHYYYAFGFALNSKCYKIIRYSIINKNNS 184
VCVLNP+TNEY K+ F K D + Y+Y GF+ +K YK+ R +
Sbjct: 130 RGHRPGVVCVLNPMTNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYV----- 189
Query: 185 RIVSLQLRKVCIHASTANSHGQWTRPKPRP-FLLQGQGTYFNGALYWVGKVYNPPVA-KH 244
+ + + +WT P FL + G YFNG LYWVG P
Sbjct: 190 ------CHEFIVEIFAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGGQQLPNAGLSD 249
Query: 245 VVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEED 304
V+ RLDLED+KFK+ISFP + +P ++ + ND LYLT+ + Y VWKMEED
Sbjct: 250 VIYRLDLEDDKFKQISFPLDGDDEGDFP---YIGVYNDTLYLTLCCGDFE-YHVWKMEED 309
Query: 305 FSWIKAFVVCRNQLNSYNSKTLPNLRP-------SKITEDGEILCL-----------YKS 364
FSWIK FV+ + N ++S LP P K EDG ILCL
Sbjct: 310 FSWIKEFVLALPE-NVHHS--LPRHHPIGYCLQLIKACEDGNILCLCAGLYLILYDPKTE 369
Query: 365 SKQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
+ + LT Q+ + + + Q I+ FNF+ LH IL G
Sbjct: 370 TTELLTDQDFEIKKHMWVYQ-IDSFNFNSLHNILAG 382
BLAST of Sed0009722 vs. NCBI nr
Match:
XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])
HSP 1 Score: 198.0 bits (502), Expect = 1.5e-46
Identity = 136/387 (35.14%), Postives = 195/387 (50.39%), Query Frame = 0
Query: 6 NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
N E+ ++I LIFSKL F+NL +CR VCKAW+ +VL K + SI+++LF A
Sbjct: 12 NKGREIPAELIWLIFSKL-PFVNLPSCRLVCKAWSDVVLTGKL--HPSISISNHLFLAHD 71
Query: 66 SPSSCEFHCVYFNPKHLDRTEVIGSFSINP----CCKNIKIFNSCNGLLLCYL--FLPSI 125
C++ +PK+L + F +P I I N CNGLL C +
Sbjct: 72 YLFDPNLQCLHLDPKYLGGMCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTKM 131
Query: 126 PPTNRNKVCVLNPVTNEYIK--VFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSR 185
PP +VC+LNP+TNEY K + KD +Y Y FGF+ +K YK++R+
Sbjct: 132 PPYENVEVCILNPMTNEYFKPPISNASKDRWYYCYRFGFSPKTKQYKLVRF--------- 191
Query: 186 IVSLQLRKVCIHAST--ANSHGQWTRPKPRPFLLQGQGTYFNGALYWVGKVYNPPVAKHV 245
S + + T N + P ++ YFNG+LYW+GK P +V
Sbjct: 192 FYSCDKAAILLETFTFGTNCKSTYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHPT--NV 251
Query: 246 VIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEEDF 305
+ RLD+E E+ +EISFPQ C + + N LYLT+ Y VWKMEEDF
Sbjct: 252 LYRLDIEKEELQEISFPQSGGC-------CSIGVFNGSLYLTLAQGRYHAYHVWKMEEDF 311
Query: 306 SWIKAFVVCRNQLNSYNSKTLPN-LRPSKITEDGEILC--------LYKSSKQFLTSQND 365
SW KAF V ++ ++ + + L+ + +DG+ILC LY S Q + S
Sbjct: 312 SWTKAFDVLLPKIYVHHRRLYDSQLQLIRACDDGKILCLISGLDLILYNSKTQRMESLTY 371
Query: 366 TLVCCLKLNQIINCFNFDPLHKILGGD 374
+ K+++ I+ FNFD LHKIL GD
Sbjct: 372 QHLNIKKVHR-IDSFNFDSLHKILTGD 376
BLAST of Sed0009722 vs. NCBI nr
Match:
XP_038878453.1 (F-box protein At3g07870-like [Benincasa hispida] >XP_038878454.1 F-box protein At3g07870-like [Benincasa hispida])
HSP 1 Score: 193.0 bits (489), Expect = 4.7e-45
Identity = 150/402 (37.31%), Postives = 205/402 (51.00%), Query Frame = 0
Query: 6 NINSELSTDII--QLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCA 65
N N E+ D I QLIFSKL + ++L CR VCK+WN +V+ +SNLF A
Sbjct: 18 NKNWEIPPDHILHQLIFSKL-SIVDLQACRQVCKSWNNIVV----------QFDSNLFFA 77
Query: 66 QISPSSCEFHCVYFNPKHLDRTEVIGSFSINP--CCKNIKIFNSCNGLLLC---YLFLPS 125
Q SP S HC+ F+PKH+ + SF+ +P + KI C+GLLLC +
Sbjct: 78 QTSPDSRNIHCMDFDPKHMGAMNSLASFTFHPKYSSASSKILCCCHGLLLCSFRFFKFYD 137
Query: 126 IPPTNRNKVCVLNPVTNEYIKVFFQKKD-IDHYYYAFGFALNSKCYKIIRY----SIINK 185
+ +R K+C+LNP TNEY+ V + D+Y YAFGF+LN+K +KI+R+ S
Sbjct: 138 LIEYSRTKICILNPFTNEYLVVSSDTGNRHDNYSYAFGFSLNTKQFKIVRFTYKHSSFQP 197
Query: 186 NNSRIVSLQLRKVCIHASTANSHGQWTRPKPRPFL---LQGQGT-YFNGALYWVGKVYNP 245
+++ I +C R +P FL +Q G YFNGALYWVG
Sbjct: 198 SSTSIEIYAFETLC------------PRLRPLGFLPTSIQTDGAYYFNGALYWVGTDQQL 257
Query: 246 PVAKH--VVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQ 305
+ H V+ LDLED K + S PQ H ++ F LN LYLT + D YQ
Sbjct: 258 LLKAHKDVIYCLDLEDYKLNQCSLPQ----HNQFRLAYFFGALNGALYLT-TLENEDQYQ 317
Query: 306 VWKMEED-FSWIKAFVVCRNQLN-----SYNSKTLPNLRPSKITEDGEILCLY------- 365
+WKME+D FS I FV+ + L +S++L NL+P KI EDG+ LCL
Sbjct: 318 MWKMEQDVFSCIILFVLPKLNLRFSKHLPQHSRSLINLQPIKICEDGKFLCLLGGLVFLL 377
Query: 366 ----KSSKQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
+ Q LT Q+ + K+ I FNF+ LH IL G
Sbjct: 378 CDPNTGTTQVLTDQDVEIEKHFKVFP-IETFNFNSLHNILLG 390
BLAST of Sed0009722 vs. NCBI nr
Match:
XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])
HSP 1 Score: 187.2 bits (474), Expect = 2.6e-43
Identity = 141/395 (35.70%), Postives = 201/395 (50.89%), Query Frame = 0
Query: 4 RRNINSELSTD-IIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFC 63
R++ +SEL D IIQ+I SK+ F NL +CR VCKAWN LVL CK + + S+L
Sbjct: 10 RKSSDSELPPDNIIQVILSKVPLF-NLPSCRLVCKAWNNLVLTCK---FDPPLLISSLSL 69
Query: 64 AQISPSSCEFHCVYFNPKHLDRTEVIGSFSINP--CCKNIKIFNSCNGLLLCYLFLPSIP 123
A PS +C+ FN K+L+ + SF+ +P +I I NSCNGLL +
Sbjct: 70 AYDCPSR-NLYCMDFNLKYLEGMSSVVSFTFHPKFFTSSISIINSCNGLLSLLISKRKSG 129
Query: 124 PTNRNKVCVLNPVTNEYIKVFFQKKDIDH------YYYAFGFALNSKCYKIIRYSIINKN 183
+C+LNP+TNEY K F +K H Y Y GF+ +K YKI R S +
Sbjct: 130 SPISYVLCILNPMTNEYFK-FPAEKSKTHCCCGRPYSYGLGFSPETKQYKIARTSFLRDE 189
Query: 184 NSRIVSLQLRKVCIHASTANSHGQWTRPKPRPFL-LQGQGTYFNGALYWVGKVYNPPVAK 243
++ V + + +WT P L ++ G YFNG LYW P +
Sbjct: 190 STTSVEI---------FAFGTTREWTPVGVLPSLVVEDHGVYFNGGLYWTVDELQPRDSN 249
Query: 244 HVVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDH-YQVWKME 303
+ + RLD+E+EK ++IS P + H F + + LYLT +D+ YQVWKME
Sbjct: 250 NAIYRLDIENEKLEKISCPHYGGGHF------FFGVFDGTLYLTTYTGTVDNIYQVWKME 309
Query: 304 EDFSWIKAFVVCRNQLNSYNSKTLP----NLRPSKITEDGEILCLY----------KSSK 363
E+ SWIKAFV+ R + + P L+P K+ EDG+ILCL K+ +
Sbjct: 310 ENLSWIKAFVLSRPENLRHPEHDQPWGVSQLQPIKVCEDGKILCLLAGFLLILYDPKTKR 369
Query: 364 -QFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
+ LT+Q+ L ++Q I+ NF+ L IL G
Sbjct: 370 VKILTNQDVETERHLHVHQ-IDSSNFNSLPNILAG 382
BLAST of Sed0009722 vs. NCBI nr
Match:
XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])
HSP 1 Score: 179.1 bits (453), Expect = 7.1e-41
Identity = 135/394 (34.26%), Postives = 193/394 (48.98%), Query Frame = 0
Query: 6 NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
N SEL D++QLIFSKL F NL CR V WN L+ CK +D S SI+ F
Sbjct: 11 NKRSELPPDVLQLIFSKL-PFFNLPTCRLVSTTWNNLISSCK-FDPS-ISISHLFFARFY 70
Query: 66 SPSSCEFHCVYFNPKHLDRTEVIGSFSINP-----CCKNIKIFNSCNGLLLCYLFLPSIP 125
S HCV F+P+H + + SF+ +P C+ I I NSC+GL+ +
Sbjct: 71 SSRHPNLHCVEFDPQHAEGMSTVASFAFHPDLSSGSCR-ITIINSCSGLISLIINKRRRR 130
Query: 126 PTNRNKVCVLNPVTNEYIKVFFQKKD---IDHYYYAFGFALNSKCYKIIRYSIINKNNSR 185
+ VCVLNP+TNEY K+ + + +Y Y GF+ + YK+ R +
Sbjct: 131 GHRLDLVCVLNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHD---- 190
Query: 186 IVSLQLRKVCIHASTANSHGQWTRPKPRP-FLLQGQGTYFNGALYWVG--KVYNPPVAKH 245
+ + + +WT P FL + G Y NG LYWVG K+ N ++ +
Sbjct: 191 -------EFIVDIFAFGTSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDY 250
Query: 246 --VVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKME 305
V+ RLDL+DEKF++ISFP + ++ + N LYLT D Y WKME
Sbjct: 251 TEVIYRLDLKDEKFEKISFPLDGGD------DPYIAVYNGTLYLTFCCEDFD-YHAWKME 310
Query: 306 EDFSWIKAFVVCRNQLNSYNSKTLP---NLRPSKITEDGEILCLY-----------KSSK 365
EDFSW K FV+ + ++ + P L+ K EDG ILCLY +
Sbjct: 311 EDFSWSKEFVLALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTV 370
Query: 366 QFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
+ LT+Q+ + + ++Q I F+F+ LH IL G
Sbjct: 371 EILTNQDFEIKEAMWVHQ-IESFSFNSLHNILAG 381
BLAST of Sed0009722 vs. ExPASy TrEMBL
Match:
A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 7.1e-47
Identity = 136/387 (35.14%), Postives = 195/387 (50.39%), Query Frame = 0
Query: 6 NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
N E+ ++I LIFSKL F+NL +CR VCKAW+ +VL K + SI+++LF A
Sbjct: 12 NKGREIPAELIWLIFSKL-PFVNLPSCRLVCKAWSDVVLTGKL--HPSISISNHLFLAHD 71
Query: 66 SPSSCEFHCVYFNPKHLDRTEVIGSFSINP----CCKNIKIFNSCNGLLLCYL--FLPSI 125
C++ +PK+L + F +P I I N CNGLL C +
Sbjct: 72 YLFDPNLQCLHLDPKYLGGMCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTKM 131
Query: 126 PPTNRNKVCVLNPVTNEYIK--VFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSR 185
PP +VC+LNP+TNEY K + KD +Y Y FGF+ +K YK++R+
Sbjct: 132 PPYENVEVCILNPMTNEYFKPPISNASKDRWYYCYRFGFSPKTKQYKLVRF--------- 191
Query: 186 IVSLQLRKVCIHAST--ANSHGQWTRPKPRPFLLQGQGTYFNGALYWVGKVYNPPVAKHV 245
S + + T N + P ++ YFNG+LYW+GK P +V
Sbjct: 192 FYSCDKAAILLETFTFGTNCKSTYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHPT--NV 251
Query: 246 VIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEEDF 305
+ RLD+E E+ +EISFPQ C + + N LYLT+ Y VWKMEEDF
Sbjct: 252 LYRLDIEKEELQEISFPQSGGC-------CSIGVFNGSLYLTLAQGRYHAYHVWKMEEDF 311
Query: 306 SWIKAFVVCRNQLNSYNSKTLPN-LRPSKITEDGEILC--------LYKSSKQFLTSQND 365
SW KAF V ++ ++ + + L+ + +DG+ILC LY S Q + S
Sbjct: 312 SWTKAFDVLLPKIYVHHRRLYDSQLQLIRACDDGKILCLISGLDLILYNSKTQRMESLTY 371
Query: 366 TLVCCLKLNQIINCFNFDPLHKILGGD 374
+ K+++ I+ FNFD LHKIL GD
Sbjct: 372 QHLNIKKVHR-IDSFNFDSLHKILTGD 376
BLAST of Sed0009722 vs. ExPASy TrEMBL
Match:
A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 3.4e-41
Identity = 135/394 (34.26%), Postives = 193/394 (48.98%), Query Frame = 0
Query: 6 NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
N SEL D++QLIFSKL F NL CR V WN L+ CK +D S SI+ F
Sbjct: 11 NKRSELPPDVLQLIFSKL-PFFNLPTCRLVSTTWNNLISSCK-FDPS-ISISHLFFARFY 70
Query: 66 SPSSCEFHCVYFNPKHLDRTEVIGSFSINP-----CCKNIKIFNSCNGLLLCYLFLPSIP 125
S HCV F+P+H + + SF+ +P C+ I I NSC+GL+ +
Sbjct: 71 SSRHPNLHCVEFDPQHAEGMSTVASFAFHPDLSSGSCR-ITIINSCSGLISLIINKRRRR 130
Query: 126 PTNRNKVCVLNPVTNEYIKVFFQKKD---IDHYYYAFGFALNSKCYKIIRYSIINKNNSR 185
+ VCVLNP+TNEY K+ + + +Y Y GF+ + YK+ R +
Sbjct: 131 GHRLDLVCVLNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHD---- 190
Query: 186 IVSLQLRKVCIHASTANSHGQWTRPKPRP-FLLQGQGTYFNGALYWVG--KVYNPPVAKH 245
+ + + +WT P FL + G Y NG LYWVG K+ N ++ +
Sbjct: 191 -------EFIVDIFAFGTSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDY 250
Query: 246 --VVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKME 305
V+ RLDL+DEKF++ISFP + ++ + N LYLT D Y WKME
Sbjct: 251 TEVIYRLDLKDEKFEKISFPLDGGD------DPYIAVYNGTLYLTFCCEDFD-YHAWKME 310
Query: 306 EDFSWIKAFVVCRNQLNSYNSKTLP---NLRPSKITEDGEILCLY-----------KSSK 365
EDFSW K FV+ + ++ + P L+ K EDG ILCLY +
Sbjct: 311 EDFSWSKEFVLALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTV 370
Query: 366 QFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
+ LT+Q+ + + ++Q I F+F+ LH IL G
Sbjct: 371 EILTNQDFEIKEAMWVHQ-IESFSFNSLHNILAG 381
BLAST of Sed0009722 vs. ExPASy TrEMBL
Match:
A0A0A0KJY9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 SV=1)
HSP 1 Score: 173.3 bits (438), Expect = 1.9e-39
Identity = 135/396 (34.09%), Postives = 197/396 (49.75%), Query Frame = 0
Query: 8 NSELSTD-IIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCA-QI 67
NSE D IIQ+I SK+ F NL +CR VCK+WN L+L CK + +LF +
Sbjct: 14 NSEFPPDNIIQVILSKVPLF-NLTSCRLVCKSWNNLILTCK--------FDPSLFLSFAY 73
Query: 68 SPSSCEFHCVYFNPKHLDRTEVIGSFSINP----CCKNIKIFNSCNGLLLCYLFLPSIPP 127
S +CV F+P + + IGSF+ +P +I I N+CNGLL + +
Sbjct: 74 DCPSRTLYCVDFDPMYFEGMNSIGSFTFHPKFSTSDSSISIINACNGLLSLLISKRKLGS 133
Query: 128 TNRNKVCVLNPVTNEYIKVFFQKKDIDH------YYYAFGFALNSKCYKIIRYSIINKNN 187
+ + +LNP+TNEY K F +K H Y Y GF +K YKI R S +
Sbjct: 134 VS-YVLGILNPMTNEYFK-FPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDES 193
Query: 188 SRIVSLQLRKVCIHASTANSHGQWTRPKPRPFL-LQGQGTYFNGALYWVGKVYNPPVAK- 247
+ +V + + ++H WT P L ++ G YF G LYWV +P +
Sbjct: 194 TTLVEI--------FTFGSTHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSI 253
Query: 248 HVVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEE 307
+ RLDLE+EK ++IS PQ+ H F + + LYLT+ + + YQVWKM++
Sbjct: 254 SAIYRLDLENEKLEKISCPQYIGGHF------FFGVFDGTLYLTVSKN--NKYQVWKMKD 313
Query: 308 DFSWIKAFVVCR-----NQLNSYNSKTLPNLRPSKITEDGEILCLY-----------KSS 367
+FSWIKAFV+ R + + + + L P K EDG+ILCL S
Sbjct: 314 NFSWIKAFVISRPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKS 373
Query: 368 KQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGGD 374
+ LT Q+ + L ++ I+ FNF+ L IL G+
Sbjct: 374 AEILTDQSVKVEKHLHVHH-IDAFNFNSLPSILAGN 381
BLAST of Sed0009722 vs. ExPASy TrEMBL
Match:
A0A6J1HYC7 (F-box protein At3g07870-like OS=Cucurbita maxima OX=3661 GN=LOC111467985 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 4.2e-39
Identity = 124/387 (32.04%), Postives = 197/387 (50.90%), Query Frame = 0
Query: 10 ELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI---- 69
EL D+++LI SKL + L +CR VCK WN ++L K YD S S +SN A +
Sbjct: 14 ELIHDVVELILSKL-PYYYLPSCRLVCKTWNNVILSSK-YDLS-ISADSNFLLAHVYSNR 73
Query: 70 --SPSSCEFHCVYFNPKHLDRTEVIGSFSINPCC---KNIKIFNSCNGLLLCYLFLPSIP 129
PS + HC+ +P H+ + S +++ I NSCNGLL + +
Sbjct: 74 RDCPSFRDLHCLELDPDHVKGVRSVASLNLHRKYFQHSFISTINSCNGLLAFVVTKNTKR 133
Query: 130 PTNRNKVCVLNPVTNEYI---KVFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSR 189
N V + NP+TNEY+ K F++K + + Y FGF +K YK++R S ++ NS
Sbjct: 134 WLTPNTVVIFNPMTNEYLELPKDEFKRKRL-NCSYGFGFCPRTKQYKVVRNSTVDDRNST 193
Query: 190 IVSLQLRKVCIHASTANSHGQWTRPKPRPFLLQG-QGTYFNGALYWVGKVYNPPVAKHVV 249
+ S ++ + +WTR + G G Y NG L+W+G+ + +V+
Sbjct: 194 VHSNYKSEI----FAFGTRQEWTRIESPSCSFHGCHGAYLNGGLHWIGQ---NDLGYNVI 253
Query: 250 IRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKMEEDFS 309
RL++EDEK+K+I FP + + ++ + N L+LTI M + Y++WKME D S
Sbjct: 254 YRLNMEDEKYKQIPFPNHDG------YFPYIGVFNGALHLTISMEEYE-YRIWKMEGDGS 313
Query: 310 WIKAF--VVCRNQLNSYNSKTLPNLRPSKITEDGEILCLYKSSKQFLTS---------QN 369
WIK+F +V + S++ T+ ++ K DG+ILC++ ++ L
Sbjct: 314 WIKSFSVIVPTKNIISFSKSTVEQIKTCK---DGKILCVWAGAQFVLYDPKTETMEKLME 373
Query: 370 DTLVCCLKLNQIINCFNFDPLHKILGG 373
DT+V ++ I+CFNF L IL G
Sbjct: 374 DTIVRYFSVHN-IDCFNFSALRDILTG 378
BLAST of Sed0009722 vs. ExPASy TrEMBL
Match:
A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 9.3e-39
Identity = 138/395 (34.94%), Postives = 186/395 (47.09%), Query Frame = 0
Query: 6 NINSELSTDIIQLIFSKLNNFLNLCNCRAVCKAWNKLVLDCKSYDYSKASINSNLFCAQI 65
N + EL DI+Q IFSK+ F NL CR V + WN L+ CK +D S SI F
Sbjct: 10 NKSYELPPDILQQIFSKI-PFFNLPTCRLVSRTWNNLISSCK-FDPS-TSIYHLFFARFY 69
Query: 66 SPSSCEFHCVYFNPKHLDRTEVIGSFSINP----CCKNIKIFNSCNGLLLCYLFLPSIPP 125
S HCV F+P+H++ ++ SF+ +P I I NSC+GL+ +
Sbjct: 70 SSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRG 129
Query: 126 TNRNKVCVLNPVTNEYIK---VFFQKKDIDHYYYAFGFALNSKCYKIIRYSIINKNNSRI 185
R+ VCVLNP+TNEY K + + + +Y Y GF+ + YK+ R +N I
Sbjct: 130 QRRDVVCVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHF--AHNEFI 189
Query: 186 VSLQLRKVCIHASTANSHGQWTRPKPRP-FLLQGQGTYFNGALYWVGKVYNPPVA----- 245
V + + +WT P FL + G YFNG LYWVG P
Sbjct: 190 VDI---------FAFGTSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDY 249
Query: 246 KHVVIRLDLEDEKFKEISFPQFENSHVRWPFNCFLWLLNDGLYLTIQMSILDHYQVWKME 305
VV RLDL DEKFK+IS P F ++ + N LYLT+ D Y VWKM+
Sbjct: 250 TGVVYRLDLNDEKFKKISIP-FGGDEP------YVGVYNGTLYLTLCCEDFD-YHVWKMK 309
Query: 306 EDFSWIKAFVVC--RNQLNSYNSKTLPN--LRPSKITEDGEILCL-----------YKSS 365
EDFSW K FV+ N L+S + L+ K EDG ILCL
Sbjct: 310 EDFSWSKEFVLALPENILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQ 369
Query: 366 KQFLTSQNDTLVCCLKLNQIINCFNFDPLHKILGG 373
+ LT Q+ + + +Q I F+F+ LH L G
Sbjct: 370 MEILTDQDFEIKEGMWFHQ-IESFSFNSLHNTLTG 381
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038880514.1 | 2.3e-47 | 37.88 | putative F-box protein At1g46984 [Benincasa hispida] | [more] |
XP_022143297.1 | 1.5e-46 | 35.14 | F-box/kelch-repeat protein At3g06240-like [Momordica charantia] | [more] |
XP_038878453.1 | 4.7e-45 | 37.31 | F-box protein At3g07870-like [Benincasa hispida] >XP_038878454.1 F-box protein A... | [more] |
XP_038883771.1 | 2.6e-43 | 35.70 | putative F-box protein At1g60370 [Benincasa hispida] | [more] |
XP_004135796.1 | 7.1e-41 | 34.26 | putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CQE2 | 7.1e-47 | 35.14 | F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1... | [more] |
A0A0A0M1M5 | 3.4e-41 | 34.26 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... | [more] |
A0A0A0KJY9 | 1.9e-39 | 34.09 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 ... | [more] |
A0A6J1HYC7 | 4.2e-39 | 32.04 | F-box protein At3g07870-like OS=Cucurbita maxima OX=3661 GN=LOC111467985 PE=4 SV... | [more] |
A0A5D3CIX9 | 9.3e-39 | 34.94 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... | [more] |
Match Name | E-value | Identity | Description | |