Homology
BLAST of Sed0009676 vs. NCBI nr
Match:
XP_008457622.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_008457623.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_016902170.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >KAA0045664.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ99619.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 257.3 bits (656), Expect = 1.2e-64
Identity = 161/334 (48.20%), Postives = 182/334 (54.49%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
+HAFVGKS WL S +VFDE+PMKN VCANALLA Y EARM
Sbjct: 133 IHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAGYGEARM 192
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
WVE L++LR+M LDLKYD FTLSASLRACAGLSA YDITS
Sbjct: 193 WVE-----GLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILRTVYDITS 252
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ LG +EDGKRDII+WTSM SVY NGC+KRVI
Sbjct: 253 DVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRNGCYKRVI 312
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 225
ELYNQMLMEGIKPD V FV VISACGHT EVNLGV+YFDSMQSDF LE ++HYS
Sbjct: 313 ELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLADL 372
BLAST of Sed0009676 vs. NCBI nr
Match:
XP_038901137.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901138.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901139.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901140.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901141.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901143.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida])
HSP 1 Score: 256.5 bits (654), Expect = 2.1e-64
Identity = 162/336 (48.21%), Postives = 182/336 (54.17%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
+HAFVGKS WL S +VFDEIPMKN VCANALLA Y EARM
Sbjct: 140 IHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVEVFDEIPMKNTVCANALLAGYGEARM 199
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
WVE L++LR+M LDLKYD FTLSASLRACAGLSA YDIT
Sbjct: 200 WVE-----GLELLREMQALDLKYDQFTLSASLRACAGLSAIALGKQVHAYLLRTVYDITC 259
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ L +KEDGKRDII+WTSM SVY NGC+KRVI
Sbjct: 260 DVHLQSTLIEMYGKSGMVEKAWNVFNFAGLRQKEDGKRDIIMWTSMLSVYGRNGCYKRVI 319
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 225
ELYNQMLMEG KPD V FV VISACGHT EVNLGV+YFDSMQSDF LE ++HYS
Sbjct: 320 ELYNQMLMEGNKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLVDL 379
BLAST of Sed0009676 vs. NCBI nr
Match:
XP_031736718.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Cucumis sativus])
HSP 1 Score: 251.5 bits (641), Expect = 6.7e-63
Identity = 160/333 (48.05%), Postives = 178/333 (53.45%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
+HAFVGKS WL S +VFDE+PMKN VCANALLA Y EARM
Sbjct: 37 IHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAGYGEARM 96
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
WVE L++LR+M LDLKYD FTLSASLRAC GLSA YDITS
Sbjct: 97 WVE-----GLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDITS 156
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ LG++EDGKRDII+WTSM SVY NGC+KRVI
Sbjct: 157 DVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCYKRVI 216
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 224
ELYNQMLMEGIKPD V FV VISACGHT EVNLGV+YFDSMQSDF LE ++HYS
Sbjct: 217 ELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVQYFDSMQSDFGLEPGQEHYSCLADL 276
BLAST of Sed0009676 vs. NCBI nr
Match:
XP_022944055.1 (pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita moschata] >KAG7010880.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 251.1 bits (640), Expect = 8.8e-63
Identity = 157/334 (47.01%), Postives = 183/334 (54.79%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
MHAFVGKS WL S KVFDEIP+KN VCANALLA Y +A M
Sbjct: 140 MHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAGYGDASM 199
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
W++ L++LR+M+VLDLKYD FTLSASLRAC GLSA YDI+S
Sbjct: 200 WID-----GLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVYDISS 259
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ LG+KEDGKRDII+WTSM S Y NGC+ RVI
Sbjct: 260 DVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVI 319
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 225
ELYNQMLMEGIKPD V FV VISACGHT +VNLGV+YFDSMQS F LE ++HYS
Sbjct: 320 ELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDL 379
BLAST of Sed0009676 vs. NCBI nr
Match:
XP_022986554.1 (pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita maxima])
HSP 1 Score: 248.8 bits (634), Expect = 4.3e-62
Identity = 157/334 (47.01%), Postives = 181/334 (54.19%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
MHAFVGKS WL S KVFDEIP+KN VCANALLA Y +A M
Sbjct: 52 MHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAGYGDASM 111
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
W + L++LR+MHVLDLKYD FTLSASLRAC GLSA YDI+S
Sbjct: 112 WFD-----GLELLRKMHVLDLKYDRFTLSASLRACTGLSAIALGKQVHAYLLRTVYDISS 171
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ LG+KEDGKRDII+WTSM S Y NGC+ RVI
Sbjct: 172 DVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVI 231
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 225
ELYNQMLMEGIKPD V FV VISACGHT +VNLGV+YFDSMQS F LE ++HYS
Sbjct: 232 ELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDL 291
BLAST of Sed0009676 vs. ExPASy Swiss-Prot
Match:
Q9CAY1 (Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=1 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 2.2e-16
Identity = 55/194 (28.35%), Postives = 94/194 (48.45%), Query Frame = 0
Query: 12 GSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASL 71
G ++FDE+P+K L+ NA+++ Y + + +V L++ QM + D FTL + L
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDV-----LELYEQMKSSGVCPDPFTLVSVL 269
Query: 72 RACAGLSAYDI---------------------TSVVHLQRLGKKEDGK--------RDII 131
+CA L A I S+ R G + + ++
Sbjct: 270 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 329
Query: 132 VWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSM 177
WT+M Y +G + + L++ M+ GI+PD VFV V+SAC H+ + G+E F +M
Sbjct: 330 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 389
BLAST of Sed0009676 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 55/192 (28.65%), Postives = 98/192 (51.04%), Query Frame = 0
Query: 15 VFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRAC 74
+FDE+P +N V N++++ + + + L M R+M D+K D FT+ + L AC
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDA-----LDMFREMQEKDVKPDGFTMVSLLNAC 273
Query: 75 AGLSAYD--------------------ITSVVHLQ-RLGKKEDG--------KRDIIVWT 134
A L A + +T+++ + + G E+G K+ + W
Sbjct: 274 AYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWN 333
Query: 135 SMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSD 178
SM NG +R ++L++++ G++PDSV F+ V++AC H+ EV+ E+F M+
Sbjct: 334 SMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEK 393
BLAST of Sed0009676 vs. ExPASy Swiss-Prot
Match:
O49287 (Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E5 PE=3 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 70/246 (28.46%), Postives = 113/246 (45.93%), Query Frame = 0
Query: 14 KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRA 73
+VF+ I K+L+ N++ + + VE L+ QMH LDL D +LS+ + A
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVET-----LEYFHQMHKLDLPTDEVSLSSVISA 464
Query: 74 CAGLSAYDI--------------------TSVVHLQ-RLGKKEDGKR--------DIIVW 133
CA +S+ ++ +S++ L + G E G+R D + W
Sbjct: 465 CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPW 524
Query: 134 TSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQS 193
SM S Y TNG I+L+ +M + GI+P + F+ V++AC + V G + F+SM+
Sbjct: 525 NSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKV 584
Query: 194 DFRLELSKKHYSLSWGIGQSMNAQCWDIHYAIKLYAGF------GLWNEIKQLRGFVRKE 225
D K+H+S + A+ + AI L +W+ I LRG V
Sbjct: 585 DHGFVPDKEHFSCM----VDLLARAGYVEEAINLVEEMPFDVDGSMWSSI--LRGCVANG 638
BLAST of Sed0009676 vs. ExPASy Swiss-Prot
Match:
Q9LXY5 (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1)
HSP 1 Score: 82.4 bits (202), Expect = 7.1e-15
Identity = 52/194 (26.80%), Postives = 91/194 (46.91%), Query Frame = 0
Query: 11 LGSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSAS 70
+ SKVFDE+P+++LV N ++ + + + L M ++M + D +TL A
Sbjct: 160 IASKVFDEMPVRDLVSWNVMICCFSHVGLHNQA-----LSMYKRMGNEGVCGDSYTLVAL 219
Query: 71 LRACAGLSAYDITSVVH---------------------LQRLGKKEDG--------KRDI 130
L +CA +SA ++ ++H + G E+ KRD+
Sbjct: 220 LSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDV 279
Query: 131 IVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDS 176
+ W SM Y +G I + +M+ G++P+++ F+ ++ C H V GVE+F+
Sbjct: 280 LTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEI 339
BLAST of Sed0009676 vs. ExPASy Swiss-Prot
Match:
O49399 (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E101 PE=3 SV=2)
HSP 1 Score: 82.0 bits (201), Expect = 9.2e-15
Identity = 54/191 (28.27%), Postives = 91/191 (47.64%), Query Frame = 0
Query: 14 KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRA 73
+VFD +P++++V NA++ Y + EV + + KML K D FTL + L A
Sbjct: 258 EVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFN-KMLDDS---TEKPDGFTLVSVLSA 317
Query: 74 CAGLSAYDITSVVHL---------------------QRLGK--------KEDGKRDIIVW 133
CA L + VH+ + GK + KRD+ W
Sbjct: 318 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTW 377
Query: 134 TSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQS 176
S+ S +G K +E++++M+ EG KP+ + F+ V+SAC H ++ + F+ M S
Sbjct: 378 NSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSS 437
BLAST of Sed0009676 vs. ExPASy TrEMBL
Match:
A0A1S3C6K8 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=3656 GN=LOC103497272 PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 5.9e-65
Identity = 161/334 (48.20%), Postives = 182/334 (54.49%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
+HAFVGKS WL S +VFDE+PMKN VCANALLA Y EARM
Sbjct: 133 IHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAGYGEARM 192
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
WVE L++LR+M LDLKYD FTLSASLRACAGLSA YDITS
Sbjct: 193 WVE-----GLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILRTVYDITS 252
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ LG +EDGKRDII+WTSM SVY NGC+KRVI
Sbjct: 253 DVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRNGCYKRVI 312
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 225
ELYNQMLMEGIKPD V FV VISACGHT EVNLGV+YFDSMQSDF LE ++HYS
Sbjct: 313 ELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLADL 372
BLAST of Sed0009676 vs. ExPASy TrEMBL
Match:
A0A5D3BKX2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001930 PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 5.9e-65
Identity = 161/334 (48.20%), Postives = 182/334 (54.49%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
+HAFVGKS WL S +VFDE+PMKN VCANALLA Y EARM
Sbjct: 133 IHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAGYGEARM 192
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
WVE L++LR+M LDLKYD FTLSASLRACAGLSA YDITS
Sbjct: 193 WVE-----GLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILRTVYDITS 252
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ LG +EDGKRDII+WTSM SVY NGC+KRVI
Sbjct: 253 DVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRNGCYKRVI 312
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 225
ELYNQMLMEGIKPD V FV VISACGHT EVNLGV+YFDSMQSDF LE ++HYS
Sbjct: 313 ELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLADL 372
BLAST of Sed0009676 vs. ExPASy TrEMBL
Match:
A0A0A0LLD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258600 PE=4 SV=1)
HSP 1 Score: 251.5 bits (641), Expect = 3.2e-63
Identity = 160/333 (48.05%), Postives = 178/333 (53.45%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
+HAFVGKS WL S +VFDE+PMKN VCANALLA Y EARM
Sbjct: 133 IHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAGYGEARM 192
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
WVE L++LR+M LDLKYD FTLSASLRAC GLSA YDITS
Sbjct: 193 WVE-----GLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDITS 252
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ LG++EDGKRDII+WTSM SVY NGC+KRVI
Sbjct: 253 DVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCYKRVI 312
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 224
ELYNQMLMEGIKPD V FV VISACGHT EVNLGV+YFDSMQSDF LE ++HYS
Sbjct: 313 ELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVQYFDSMQSDFGLEPGQEHYSCLADL 372
BLAST of Sed0009676 vs. ExPASy TrEMBL
Match:
A0A6J1FYF9 (pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita moschata OX=3662 GN=LOC111448605 PE=4 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 4.2e-63
Identity = 157/334 (47.01%), Postives = 183/334 (54.79%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
MHAFVGKS WL S KVFDEIP+KN VCANALLA Y +A M
Sbjct: 140 MHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAGYGDASM 199
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
W++ L++LR+M+VLDLKYD FTLSASLRAC GLSA YDI+S
Sbjct: 200 WID-----GLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVYDISS 259
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ LG+KEDGKRDII+WTSM S Y NGC+ RVI
Sbjct: 260 DVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVI 319
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 225
ELYNQMLMEGIKPD V FV VISACGHT +VNLGV+YFDSMQS F LE ++HYS
Sbjct: 320 ELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDL 379
BLAST of Sed0009676 vs. ExPASy TrEMBL
Match:
A0A6J1JGD1 (pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita maxima OX=3661 GN=LOC111484258 PE=4 SV=1)
HSP 1 Score: 248.8 bits (634), Expect = 2.1e-62
Identity = 157/334 (47.01%), Postives = 181/334 (54.19%), Query Frame = 0
Query: 1 MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARM 60
MHAFVGKS WL S KVFDEIP+KN VCANALLA Y +A M
Sbjct: 52 MHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAGYGDASM 111
Query: 61 WVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA---------------YDITS 120
W + L++LR+MHVLDLKYD FTLSASLRAC GLSA YDI+S
Sbjct: 112 WFD-----GLELLRKMHVLDLKYDRFTLSASLRACTGLSAIALGKQVHAYLLRTVYDISS 171
Query: 121 VVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVI 180
VHLQ LG+KEDGKRDII+WTSM S Y NGC+ RVI
Sbjct: 172 DVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVI 231
Query: 181 ELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL---- 225
ELYNQMLMEGIKPD V FV VISACGHT +VNLGV+YFDSMQS F LE ++HYS
Sbjct: 232 ELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDL 291
BLAST of Sed0009676 vs. TAIR 10
Match:
AT3G11460.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 87.4 bits (215), Expect = 1.6e-17
Identity = 55/194 (28.35%), Postives = 94/194 (48.45%), Query Frame = 0
Query: 12 GSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASL 71
G ++FDE+P+K L+ NA+++ Y + + +V L++ QM + D FTL + L
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDV-----LELYEQMKSSGVCPDPFTLVSVL 269
Query: 72 RACAGLSAYDI---------------------TSVVHLQRLGKKEDGK--------RDII 131
+CA L A I S+ R G + + ++
Sbjct: 270 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 329
Query: 132 VWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSM 177
WT+M Y +G + + L++ M+ GI+PD VFV V+SAC H+ + G+E F +M
Sbjct: 330 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 389
BLAST of Sed0009676 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 87.0 bits (214), Expect = 2.0e-17
Identity = 55/192 (28.65%), Postives = 98/192 (51.04%), Query Frame = 0
Query: 15 VFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRAC 74
+FDE+P +N V N++++ + + + L M R+M D+K D FT+ + L AC
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDA-----LDMFREMQEKDVKPDGFTMVSLLNAC 273
Query: 75 AGLSAYD--------------------ITSVVHLQ-RLGKKEDG--------KRDIIVWT 134
A L A + +T+++ + + G E+G K+ + W
Sbjct: 274 AYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWN 333
Query: 135 SMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSD 178
SM NG +R ++L++++ G++PDSV F+ V++AC H+ EV+ E+F M+
Sbjct: 334 SMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEK 393
BLAST of Sed0009676 vs. TAIR 10
Match:
AT1G77010.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16
Identity = 70/246 (28.46%), Postives = 113/246 (45.93%), Query Frame = 0
Query: 14 KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRA 73
+VF+ I K+L+ N++ + + VE L+ QMH LDL D +LS+ + A
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVET-----LEYFHQMHKLDLPTDEVSLSSVISA 464
Query: 74 CAGLSAYDI--------------------TSVVHLQ-RLGKKEDGKR--------DIIVW 133
CA +S+ ++ +S++ L + G E G+R D + W
Sbjct: 465 CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPW 524
Query: 134 TSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQS 193
SM S Y TNG I+L+ +M + GI+P + F+ V++AC + V G + F+SM+
Sbjct: 525 NSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKV 584
Query: 194 DFRLELSKKHYSLSWGIGQSMNAQCWDIHYAIKLYAGF------GLWNEIKQLRGFVRKE 225
D K+H+S + A+ + AI L +W+ I LRG V
Sbjct: 585 DHGFVPDKEHFSCM----VDLLARAGYVEEAINLVEEMPFDVDGSMWSSI--LRGCVANG 638
BLAST of Sed0009676 vs. TAIR 10
Match:
AT3G56550.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 82.4 bits (202), Expect = 5.0e-16
Identity = 52/194 (26.80%), Postives = 91/194 (46.91%), Query Frame = 0
Query: 11 LGSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSAS 70
+ SKVFDE+P+++LV N ++ + + + L M ++M + D +TL A
Sbjct: 160 IASKVFDEMPVRDLVSWNVMICCFSHVGLHNQA-----LSMYKRMGNEGVCGDSYTLVAL 219
Query: 71 LRACAGLSAYDITSVVH---------------------LQRLGKKEDG--------KRDI 130
L +CA +SA ++ ++H + G E+ KRD+
Sbjct: 220 LSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDV 279
Query: 131 IVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDS 176
+ W SM Y +G I + +M+ G++P+++ F+ ++ C H V GVE+F+
Sbjct: 280 LTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEI 339
BLAST of Sed0009676 vs. TAIR 10
Match:
AT4G18840.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 82.0 bits (201), Expect = 6.6e-16
Identity = 54/191 (28.27%), Postives = 91/191 (47.64%), Query Frame = 0
Query: 14 KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRA 73
+VFD +P++++V NA++ Y + EV + + KML K D FTL + L A
Sbjct: 258 EVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFN-KMLDDS---TEKPDGFTLVSVLSA 317
Query: 74 CAGLSAYDITSVVHL---------------------QRLGK--------KEDGKRDIIVW 133
CA L + VH+ + GK + KRD+ W
Sbjct: 318 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTW 377
Query: 134 TSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQS 176
S+ S +G K +E++++M+ EG KP+ + F+ V+SAC H ++ + F+ M S
Sbjct: 378 NSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSS 437
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008457622.1 | 1.2e-64 | 48.20 | PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis m... | [more] |
XP_038901137.1 | 2.1e-64 | 48.21 | pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benin... | [more] |
XP_031736718.1 | 6.7e-63 | 48.05 | pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Cucumis sa... | [more] |
XP_022944055.1 | 8.8e-63 | 47.01 | pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita moschata] ... | [more] |
XP_022986554.1 | 4.3e-62 | 47.01 | pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9CAY1 | 2.2e-16 | 28.35 | Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS... | [more] |
Q9SJG6 | 2.9e-16 | 28.65 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
O49287 | 1.9e-15 | 28.46 | Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS... | [more] |
Q9LXY5 | 7.1e-15 | 26.80 | Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX... | [more] |
O49399 | 9.2e-15 | 28.27 | Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3C6K8 | 5.9e-65 | 48.20 | pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=36... | [more] |
A0A5D3BKX2 | 5.9e-65 | 48.20 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0LLD6 | 3.2e-63 | 48.05 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258600 PE=4 SV=1 | [more] |
A0A6J1FYF9 | 4.2e-63 | 47.01 | pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita moschata... | [more] |
A0A6J1JGD1 | 2.1e-62 | 47.01 | pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
AT3G11460.1 | 1.6e-17 | 28.35 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G42920.1 | 2.0e-17 | 28.65 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G77010.1 | 1.3e-16 | 28.46 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G56550.1 | 5.0e-16 | 26.80 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18840.1 | 6.6e-16 | 28.27 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |