Sed0009666 (gene) Chayote v1

Overview
NameSed0009666
Typegene
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor WER-like
LocationLG11: 1250939 .. 1253148 (+)
RNA-Seq ExpressionSed0009666
SyntenySed0009666
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCAACAGCCCAAGAAAAATTTATGGAAACCAGAAGAAGATTTGAGTCCCCAAGGGGTGACACAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCCCCTCAAGGTTCCAGGTTCGAGACTCAGATGTGACATTACTCCTTCGATGTTTCTCAGTGCCTGGCCTAGGAATAGACGTGGTTACTCTTGTTTCAAACAAAAAAGAAGAAGATTTGATCCTCAGAAACTTTGTGGAAACTCATGGTGAAGGGAATTGGGCAACTGTCTCCCAGGAATCAGGTAAAAACCTTTTTTTTTACTTGCCAAATCCTCCCATCTTTGTCTCACTGTCTGTGGAGTAGAGTTTTGACCAATGTATTAAAAGACGAAAGACGCGTTTCTCTAGAAGAGGTAAAGGTGCAAGCCTCAAGGAATATGAGATGTAAGACTCGATTTAAATTAAAAACATCATACAAGTCTTAAATTTGGGTAAACAATTATGACAAAATATAGTACTTATATAAGAGTACAAAAAAAAATCACACTCACAATTGCCTCTTAAACAAAATTCCTAAATTGATATCTTTAATGTCACAGCCATTATGTAACATCACTAGTATGGTTGTATTTTTTAGGAATAAGAAACAATTTCATCAGCGAAGAAAGGAGAAATCTCTTACCACCACCTATATTGAATGCAATAAAGAACTCCAAAAAGAGATGAAAAACTGGCCAATAAAATGTGACCTTGAAATGATTGTAGGTCTTTCTAACAAAAGAATTTGTAAAATTCTTTTATTGAATGGATGATTAAACCTTGTTGGTTGATAAAATTAAATTTACCCCGACCCACGAACTTAAGTTTTTGGGTTGATTGGTGATTTAACATAATTCCAAATGGTATCATAGCAGAAGGTTCTGAGTTCGAATCTCTAGCATATCGTTTCTTCCCCAATTAAAATTAAATTCCATTTGTAAGGCATTTCTCAAATTTCTAAGCCCGCAAGTGGGGGGGAGTGTTGGTTGATATAATTAAATTTATCCCAACCCACGAGCTTAAACTTTTGGGTCGATTGATGATTTAATATAATTCAACAAACCTAAACATAAAGTCACGAACCAACTGCTCTTACTTTCCAAAGCTTACATTATCATTCAACTAATAGGATTTATGGCTGAGTTATTCTATAATTTTTTTGTCTTCAATGTTTTTAAAGCGCTAGTAAAAGAAACCCCAATATTTTTTAAGAATGGAGAAAACTAAACTATTCTTCTAATCATTATATGAGACATTGAGACTTAGCATGTTTTTCAGAGGCGTAAGCCTCTTCTGAACAAAAGGAATAAGCTTCGAAGCTAAAAATTAGAGTCTTGCTTCAAAGGAATAAGCTAAAAATCATTGCCCAGAACTCTATACCAGTGACAAAGGACGGATTTGAAAAAAAATAAGTTGTGTATCAGAAATTATTTTTTTCAATTATGTGTCCATTGCGTTCCTGCCCTATCACTCGGGTTTGATACGAGGTGGGAAAAGCTGCAGGCTAAGATGGAAGAACTACCTCATGCCTAATATAAAACATGGGGGCATGTCCAAAGAGGAAGAGGACCTAATTATCCGTATGCATAAACTTTTAGGCAATAGGTCAGTTTGCAATTGCATTGCATTAAACTATAAAGCTTAATCAATACTTACAGTAAAGAGAGTAAGCTGAATTTTCAACTCTGTTACTTCTTCCATCAGATGGTCACTAATTGCCGGTCGTCTCCCTGGTCGAACTGATAATGAAGTGAAGAACTACTGGAATACCCATTTGAATAGCCTGCAAGATAAAAAAAAAAAAAAAAAAGCTAATGACTCAAACAGCTGCAAGACAAATGATGACGTCGACGATGCCGATGGAAATAATAAGAAGCAGAAGAAAGTTATCAATCAGACTATCTATCCACAACCACTAATATGCAGTGACAACAGGACAGATCTGGCACATGATATAAAGAGAAGAAACCGGGAAGAGAACAGAGAAGTTACAGATACTTGGAATATGGATTATATAACAAGTTCTCATTATAATATAAACTATCCAGTGGTACCTGCACATAACATGGTATTTAACTTTGACGACGAACCTTACTTTGACGACGAACCTTACTTTGACCGCCTTGATCCCTTATTCCTGTTTGAAGCATTTGCAAGCAGTAGTGTTGATCCATCACTGGAGAACATGTAA

mRNA sequence

ATGAAGCAACAGCCCAAGAAAAATTTATGGAAACCAGAAGAAGATTTGAGTCCCCAAGGGGTGACACAAAACTTTGTGGAAACTCATGGTGAAGGGAATTGGGCAACTGTCTCCCAGGAATCAGCTAATGACTCAAACAGCTGCAAGACAAATGATGACGTCGACGATGCCGATGGAAATAATAAGAAGCAGAAGAAAGTTATCAATCAGACTATCTATCCACAACCACTAATATGCAGTGACAACAGGACAGATCTGGCACATGATATAAAGAGAAGAAACCGGGAAGAGAACAGAGAAGTTACAGATACTTGGAATATGGATTATATAACAAGTTCTCATTATAATATAAACTATCCAGTGGTACCTGCACATAACATGGTATTTAACTTTGACGACGAACCTTACTTTGACGACGAACCTTACTTTGACCGCCTTGATCCCTTATTCCTGTTTGAAGCATTTGCAAGCAGTAGTGTTGATCCATCACTGGAGAACATGTAA

Coding sequence (CDS)

ATGAAGCAACAGCCCAAGAAAAATTTATGGAAACCAGAAGAAGATTTGAGTCCCCAAGGGGTGACACAAAACTTTGTGGAAACTCATGGTGAAGGGAATTGGGCAACTGTCTCCCAGGAATCAGCTAATGACTCAAACAGCTGCAAGACAAATGATGACGTCGACGATGCCGATGGAAATAATAAGAAGCAGAAGAAAGTTATCAATCAGACTATCTATCCACAACCACTAATATGCAGTGACAACAGGACAGATCTGGCACATGATATAAAGAGAAGAAACCGGGAAGAGAACAGAGAAGTTACAGATACTTGGAATATGGATTATATAACAAGTTCTCATTATAATATAAACTATCCAGTGGTACCTGCACATAACATGGTATTTAACTTTGACGACGAACCTTACTTTGACGACGAACCTTACTTTGACCGCCTTGATCCCTTATTCCTGTTTGAAGCATTTGCAAGCAGTAGTGTTGATCCATCACTGGAGAACATGTAA

Protein sequence

MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVVPAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
Homology
BLAST of Sed0009666 vs. NCBI nr
Match: XP_004139409.1 (transcription factor WER [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 123/245 (50.20%), Postives = 135/245 (55.10%), Query Frame = 0

Query: 1   MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES------------------- 60
           MKQQPKKNLWKPEEDL    + +++VETHGEGNWA VSQES                   
Sbjct: 7   MKQQPKKNLWKPEEDL----ILRSYVETHGEGNWAIVSQESGLMRGAKSCRLRWKNYLRP 66

Query: 61  -----------------------------------------------------------A 120
                                                                      A
Sbjct: 67  NIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKA 126

Query: 121 NDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVT 168
           N+SNSCK NDD +  DGNNKKQKKVINQ  YPQP ICSDN TDLAHDI+RRN+EENRE  
Sbjct: 127 NNSNSCKKNDDNNSDDGNNKKQKKVINQIYYPQPPICSDNGTDLAHDIQRRNQEENREKQ 186

BLAST of Sed0009666 vs. NCBI nr
Match: XP_038889962.1 (transcription repressor MYB5 [Benincasa hispida])

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 125/245 (51.02%), Postives = 137/245 (55.92%), Query Frame = 0

Query: 1   MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES------------------- 60
           MKQQPKKNLWKPEEDL    + +N+VETHGEGNWATVSQES                   
Sbjct: 7   MKQQPKKNLWKPEEDL----ILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRP 66

Query: 61  -----------------------------------------------------------A 120
                                                                      A
Sbjct: 67  NIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKA 126

Query: 121 NDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVT 168
           N SNSCK NDD +D DGNNKKQKKVINQT YPQP ICSDN T+LAHD +RRN+EENREVT
Sbjct: 127 NASNSCKKNDDDNDDDGNNKKQKKVINQTGYPQPPICSDNGTNLAHDTQRRNQEENREVT 186

BLAST of Sed0009666 vs. NCBI nr
Match: KAG7030370.1 (Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.3 bits (477), Expect = 5.2e-44
Identity = 118/245 (48.16%), Postives = 131/245 (53.47%), Query Frame = 0

Query: 1   MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES------------------- 60
           MKQQ KKNLWKPEEDL    + +N+VETHGEGNWATVSQES                   
Sbjct: 7   MKQQLKKNLWKPEEDL----ILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRP 66

Query: 61  -----------------------------------------------------------A 120
                                                                      A
Sbjct: 67  NIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKA 126

Query: 121 NDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVT 168
           NDSNS K ND+ +D D NNKKQKKVINQT YPQP IC DN  +LAHD +RRN+EENREVT
Sbjct: 127 NDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENREVT 186

BLAST of Sed0009666 vs. NCBI nr
Match: KAG6599384.1 (Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.3 bits (477), Expect = 5.2e-44
Identity = 118/245 (48.16%), Postives = 131/245 (53.47%), Query Frame = 0

Query: 1   MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES------------------- 60
           MKQQ KKNLWKPEEDL    + +N+VETHGEGNWATVSQES                   
Sbjct: 19  MKQQLKKNLWKPEEDL----ILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRP 78

Query: 61  -----------------------------------------------------------A 120
                                                                      A
Sbjct: 79  NIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKA 138

Query: 121 NDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVT 168
           NDSNS K ND+ +D D NNKKQKKVINQT YPQP IC DN  +LAHD +RRN+EENREVT
Sbjct: 139 NDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENREVT 198

BLAST of Sed0009666 vs. NCBI nr
Match: XP_022965906.1 (transcription factor WER-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 185.7 bits (470), Expect = 3.4e-43
Identity = 116/245 (47.35%), Postives = 132/245 (53.88%), Query Frame = 0

Query: 1   MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES------------------- 60
           MKQQ KKNLWKPEEDL    + +N+VETHGEGNWATVSQES                   
Sbjct: 7   MKQQAKKNLWKPEEDL----ILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRP 66

Query: 61  -----------------------------------------------------------A 120
                                                                       
Sbjct: 67  NIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKV 126

Query: 121 NDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVT 168
           N+SNSCK    +D+ DGNNKKQKKVINQT YPQP +CSDN  + AHDI+RR++EENREVT
Sbjct: 127 NESNSCK---KMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVT 186

BLAST of Sed0009666 vs. ExPASy Swiss-Prot
Match: Q9LTF7 (Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.3e-04
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0

Query: 2  KQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESA--NDSNSCK 50
          K   K+ LWKPEED+    + +++VETHGEGNWA +S+ S       SC+
Sbjct: 9  KSYVKRGLWKPEEDM----ILKSYVETHGEGNWADISRRSGLKRGGKSCR 54

BLAST of Sed0009666 vs. ExPASy TrEMBL
Match: A0A0A0LF88 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G007440 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.5e-60
Identity = 123/167 (73.65%), Postives = 135/167 (80.84%), Query Frame = 0

Query: 1   MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGN 60
           MKQQPKKNLWKPEEDL    + +++VETHGEGNWA VSQESAN+SNSCK NDD +  DGN
Sbjct: 7   MKQQPKKNLWKPEEDL----ILRSYVETHGEGNWAIVSQESANNSNSCKKNDDNNSDDGN 66

Query: 61  NKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYP 120
           NKKQKKVINQ  YPQP ICSDN TDLAHDI+RRN+EENRE  D WNMD ITSSHYNIN P
Sbjct: 67  NKKQKKVINQIYYPQPPICSDNGTDLAHDIQRRNQEENREKQDPWNMDDITSSHYNINSP 126

Query: 121 VVPAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM 168
           ++PA+N  FN      FDDEPYFD LDP FLFEAF  SSVD SL+NM
Sbjct: 127 MIPANNTTFN------FDDEPYFDHLDPFFLFEAFGCSSVDASLDNM 163

BLAST of Sed0009666 vs. ExPASy TrEMBL
Match: A0A6J1HMX7 (transcription factor WER-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465651 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.6e-43
Identity = 116/245 (47.35%), Postives = 132/245 (53.88%), Query Frame = 0

Query: 1   MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES------------------- 60
           MKQQ KKNLWKPEEDL    + +N+VETHGEGNWATVSQES                   
Sbjct: 7   MKQQAKKNLWKPEEDL----ILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRP 66

Query: 61  -----------------------------------------------------------A 120
                                                                       
Sbjct: 67  NIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKV 126

Query: 121 NDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVT 168
           N+SNSCK    +D+ DGNNKKQKKVINQT YPQP +CSDN  + AHDI+RR++EENREVT
Sbjct: 127 NESNSCK---KMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVT 186

BLAST of Sed0009666 vs. ExPASy TrEMBL
Match: A0A6J1CPW3 (transcription factor MYB82 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013052 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.7e-40
Identity = 111/245 (45.31%), Postives = 126/245 (51.43%), Query Frame = 0

Query: 1   MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES------------------- 60
           MKQQPKKNLWKPEED+    + +N+VETHGEGNWATVSQES                   
Sbjct: 8   MKQQPKKNLWKPEEDM----ILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRP 67

Query: 61  -----------------------------------------------------------A 120
                                                                      A
Sbjct: 68  NIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKA 127

Query: 121 NDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVT 168
           NDS   K NDD DD D NNKKQKKVINQT YPQP ICS+N  ++AHD +R N+EE R VT
Sbjct: 128 NDSKDHKKNDD-DDDDANNKKQKKVINQTCYPQPPICSNNGKNVAHDTERGNQEEKRIVT 187

BLAST of Sed0009666 vs. ExPASy TrEMBL
Match: A0A5D3BGT2 (Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00730 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38
Identity = 91/145 (62.76%), Postives = 104/145 (71.72%), Query Frame = 0

Query: 23  QNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDN 82
           +N+  TH   N     +  AN+SNSCK NDD +  DGNNKKQKKVINQT YPQP +  DN
Sbjct: 104 KNYWNTHLNKN-GLQDKRKANNSNSCKKNDDNNSDDGNNKKQKKVINQTCYPQPPLYRDN 163

Query: 83  RTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVVPAHNMVFNFDDEPYFDDEPY 142
             DLAHDI+RRN+EENRE  +  NMD ITSSHYNIN P++PA+N  FN      FDDEPY
Sbjct: 164 GADLAHDIQRRNQEENREKQNPSNMDDITSSHYNINSPMIPANNTTFN------FDDEPY 223

Query: 143 FDRLDPLFLFEAFASSSVDPSLENM 168
           FD LDP FLFEAF  SSVD SL+NM
Sbjct: 224 FDHLDPFFLFEAFGCSSVDASLDNM 241

BLAST of Sed0009666 vs. ExPASy TrEMBL
Match: A0A1S3C427 (transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103496778 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38
Identity = 91/145 (62.76%), Postives = 104/145 (71.72%), Query Frame = 0

Query: 23  QNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDN 82
           +N+  TH   N     +  AN+SNSCK NDD +  DGNNKKQKKVINQT YPQP +  DN
Sbjct: 104 KNYWNTHLNKN-GLQDKRKANNSNSCKKNDDNNSDDGNNKKQKKVINQTCYPQPPLYRDN 163

Query: 83  RTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVVPAHNMVFNFDDEPYFDDEPY 142
             DLAHDI+RRN+EENRE  +  NMD ITSSHYNIN P++PA+N  FN      FDDEPY
Sbjct: 164 GADLAHDIQRRNQEENREKQNPSNMDDITSSHYNINSPMIPANNTTFN------FDDEPY 223

Query: 143 FDRLDPLFLFEAFASSSVDPSLENM 168
           FD LDP FLFEAF  SSVD SL+NM
Sbjct: 224 FDHLDPFFLFEAFGCSSVDASLDNM 241

BLAST of Sed0009666 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 45.1 bits (105), Expect = 6.6e-05
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0

Query: 2  KQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESA--NDSNSCK 50
          K   K+ LWKPEED+    + +++VETHGEGNWA +S+ S       SC+
Sbjct: 9  KSYVKRGLWKPEEDM----ILKSYVETHGEGNWADISRRSGLKRGGKSCR 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004139409.11.1e-4950.20transcription factor WER [Cucumis sativus][more]
XP_038889962.11.2e-4851.02transcription repressor MYB5 [Benincasa hispida][more]
KAG7030370.15.2e-4448.16Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6599384.15.2e-4448.16Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022965906.13.4e-4347.35transcription factor WER-like isoform X1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9LTF79.3e-0446.00Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LF882.5e-6073.65SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G007440 PE=4 S... [more]
A0A6J1HMX71.6e-4347.35transcription factor WER-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11146... [more]
A0A6J1CPW31.7e-4045.31transcription factor MYB82 isoform X2 OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A5D3BGT22.1e-3862.76Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3C4272.1e-3862.76transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103496778 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G52600.16.6e-0546.00myb domain protein 82 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..48
NoneNo IPR availablePANTHERPTHR47999:SF21TUBER-SPECIFIC AND SUCROSE-RESPONSIVE ELEMENT BINDING FACTORcoord: 2..42
NoneNo IPR availablePANTHERPTHR47999TRANSCRIPTION FACTOR MYB8-RELATED-RELATEDcoord: 2..42

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0009666.1Sed0009666.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane