Sed0009624 (gene) Chayote v1

Overview


Name	Sed0009624
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 5
Location	LG04: 44046694 .. 44047788 (-)
RNA-Seq Expression	Sed0009624
Synteny	Sed0009624

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCAGTTCCCTCTAAAAACCCCCCTAAATTCTCTTTCTCTCTCTAAAACCCCCAATTCTCCAAATCTCTCTCTCTCTCTCTCTCATTCCGATCTAAAAACCGCCAACAATGACCAACAATTCCGCCCTATTTTTCTTCATTCTCCTCATCCCACTCTCCACGGCGGCGGATCTCCGGCGGCCGTGGATCAAAGCCCAAAGCGGCGGCGGCGGCTCAGAGCTGTGGTGCGTGGCGAAGAACAACGCGGACGACGCCTCTCTCCAGTCCGCCCTGGACTGGGCGTGCGGCGCCGGCGGCGCCAACTGTTCCCCAATCCAGCCGGGCGGCGCGTGCTACGACCCCACCGACGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACCGACGACAGCTGCTTCTTCCAAAACTCCGCCGCCCTCACCTCCTTAAACCCTAGTCAGTCCCGATCTCTCTAATTTCTCCATTCATTCTTCAAATTACTTCCAGATCTGTTACTAAATCGTTTCATCTTTCTTGTTTCAGGCTTTGGAAATTGCAGATTCCCATCCAGGTAATCCTAATCGATTTTGGGGATTTCGCTTCAATTCATAATCTGTAATCAATAAATTAATTGCGGTTTATAATGCGATTGATTTTTCCTTTGATTCACGGCGCAGTTTGTTGAGGAATGGAAACTTCTCGAGCCAATCCACATCGGTAGGGTTGGGGCCGAGTGAAGATATAAGTGGGTCGGGTCGCACTTCGGGTCGGGTATGGGCTTGCTCTATATCAATCGGGTACTTGTGTTTTGTGTTTCTAACATTAAACTTGATCTAGTATTGTGTATTTGTGTTTGAATTTTTTTGGTTTTAATCAGCAAATGTTGGTAATTAGATCTTGATTTCTAAGTTTTAGATGATAATTTTATGAAATTATTTTCTTGAGAAAAAACTTGAATGAGATAGGGTGAAAACTGAGTCCACATTTTGAAGTGGCTTATTCTTGTAATTATGGGGCTTTGTAGGATTAAATTACTTGAAATATTTGAAGTTTAGTAATAATCATAGGATATGACACTTGTGGGAAATCAAAA

mRNA sequence

GCTCAGTTCCCTCTAAAAACCCCCCTAAATTCTCTTTCTCTCTCTAAAACCCCCAATTCTCCAAATCTCTCTCTCTCTCTCTCTCATTCCGATCTAAAAACCGCCAACAATGACCAACAATTCCGCCCTATTTTTCTTCATTCTCCTCATCCCACTCTCCACGGCGGCGGATCTCCGGCGGCCGTGGATCAAAGCCCAAAGCGGCGGCGGCGGCTCAGAGCTGTGGTGCGTGGCGAAGAACAACGCGGACGACGCCTCTCTCCAGTCCGCCCTGGACTGGGCGTGCGGCGCCGGCGGCGCCAACTGTTCCCCAATCCAGCCGGGCGGCGCGTGCTACGACCCCACCGACGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACCGACGACAGCTGCTTCTTCCAAAACTCCGCCGCCCTCACCTCCTTAAACCCTAGCTTTGGAAATTGCAGATTCCCATCCAGTTTGTTGAGGAATGGAAACTTCTCGAGCCAATCCACATCGGTAGGGTTGGGGCCGAGTGAAGATATAAGTGGGTCGGGTCGCACTTCGGGTCGGGTATGGGCTTGCTCTATATCAATCGGGTACTTGTGTTTTGTGTTTCTAACATTAAACTTGATCTAGTATTGTGTATTTGTGTTTGAATTTTTTTGGTTTTAATCAGCAAATGTTGGTAATTAGATCTTGATTTCTAAGTTTTAGATGATAATTTTATGAAATTATTTTCTTGAGAAAAAACTTGAATGAGATAGGGTGAAAACTGAGTCCACATTTTGAAGTGGCTTATTCTTGTAATTATGGGGCTTTGTAGGATTAAATTACTTGAAATATTTGAAGTTTAGTAATAATCATAGGATATGACACTTGTGGGAAATCAAAA

Coding sequence (CDS)

ATGACCAACAATTCCGCCCTATTTTTCTTCATTCTCCTCATCCCACTCTCCACGGCGGCGGATCTCCGGCGGCCGTGGATCAAAGCCCAAAGCGGCGGCGGCGGCTCAGAGCTGTGGTGCGTGGCGAAGAACAACGCGGACGACGCCTCTCTCCAGTCCGCCCTGGACTGGGCGTGCGGCGCCGGCGGCGCCAACTGTTCCCCAATCCAGCCGGGCGGCGCGTGCTACGACCCCACCGACGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACCGACGACAGCTGCTTCTTCCAAAACTCCGCCGCCCTCACCTCCTTAAACCCTAGCTTTGGAAATTGCAGATTCCCATCCAGTTTGTTGAGGAATGGAAACTTCTCGAGCCAATCCACATCGGTAGGGTTGGGGCCGAGTGAAGATATAAGTGGGTCGGGTCGCACTTCGGGTCGGGTATGGGCTTGCTCTATATCAATCGGGTACTTGTGTTTTGTGTTTCTAACATTAAACTTGATCTAG

Protein sequence

MTNNSALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGNCRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYLCFVFLTLNLI

Homology

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BLAST of Sed0009624 vs. NCBI nr
Match: XP_038877601.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Benincasa hispida])

HSP 1 Score: 270.8 bits (691), Expect = 8.5e-69
Identity = 137/168 (81.55%), Postives = 146/168 (86.90%), Query Frame = 0


Query: 1   MTNNSALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACG 60
           M NN +LF  ILLIP  TAAD RRP I+ QS G  +ELWCVAKNNADDASLQSALDWACG
Sbjct: 59  MPNNFSLFLLILLIP-CTAADPRRPSIRDQS-GVATELWCVAKNNADDASLQSALDWACG 118

Query: 61  AGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGN 120
           AGGA+CSPIQPGGACYD  DVQNMASFAFNDYF KHGMTDDSCFFQNSAA+TSLNPS+GN
Sbjct: 119 AGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNSAAMTSLNPSYGN 178

Query: 121 CRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYL 169
           CRFPSS+LRNGNFSSQ+TSVGLGPSEDISGS R S R WA  + IGYL
Sbjct: 179 CRFPSSVLRNGNFSSQTTSVGLGPSEDISGSSRNSARAWAWPMVIGYL 224

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BLAST of Sed0009624 vs. NCBI nr
Match: XP_008449471.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis melo])

HSP 1 Score: 264.2 bits (674), Expect = 7.9e-67
Identity = 131/168 (77.98%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MTNNSALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACG 60
           M  N +LF  ILLIP + A   RRP I+ QS G  +ELWCVAKNNADDASLQSALDWACG
Sbjct: 1   MPINFSLFLLILLIPCTAADPWRRPSIRDQS-GAATELWCVAKNNADDASLQSALDWACG 60

Query: 61  AGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGN 120
           AGGA+CSPIQPGG+CYD TDVQNMASFAFNDYF KHGMTDDSCFFQNSAA+TSLNPSFGN
Sbjct: 61  AGGADCSPIQPGGSCYDATDVQNMASFAFNDYFRKHGMTDDSCFFQNSAAITSLNPSFGN 120

Query: 121 CRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYL 169
           CRFPSS+LRNGNFSSQ+TSVGLGPSED+SGS    GR W   + IGYL
Sbjct: 121 CRFPSSVLRNGNFSSQTTSVGLGPSEDMSGSAHNLGRAWVWPMVIGYL 167

[Close]

BLAST of Sed0009624 vs. NCBI nr
Match: XP_023529864.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 7.9e-67
Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MTNNSALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACG 60
           M  N ALF  I+LI L +AA+ + P IK Q  GG +ELWCVAKNNADDASLQSALDWACG
Sbjct: 1   MAINFALFLLIVLI-LCSAAEPQHPSIKGQ--GGATELWCVAKNNADDASLQSALDWACG 60

Query: 61  AGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGN 120
           AGGA CSPIQP GACYD ++VQNMASFAFNDYFLKHGMTDDSCFFQNSAA+TSLNPS+GN
Sbjct: 61  AGGAECSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGN 120

Query: 121 CRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYLCF 171
           CRFPSS LRNGNFSSQSTSVGLGPSE++SGSGR SGR+W   I+IGY  F
Sbjct: 121 CRFPSSSLRNGNFSSQSTSVGLGPSENLSGSGRRSGRIWVWPIAIGYFFF 167

[Close]

BLAST of Sed0009624 vs. NCBI nr
Match: XP_022989094.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 262.3 bits (669), Expect = 3.0e-66
Identity = 134/175 (76.57%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MTNNSALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACG 60
           M  N ALF  I+ I L +AA+ + P IK Q  GG +ELWCVAKNNADDASLQSALDWACG
Sbjct: 1   MPINFALFLLIVPI-LCSAAEPQHPSIKGQ--GGATELWCVAKNNADDASLQSALDWACG 60

Query: 61  AGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGN 120
           AGGA+CSPIQP GACYD ++VQNMASFAFNDYFLKHGMTDDSCFFQNSAA+TSLNPS+GN
Sbjct: 61  AGGADCSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAVTSLNPSYGN 120

Query: 121 CRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYLCFVFLTL 176
           CRFPSS LRNGNFSSQSTSVGLGPSED+SGSGR S R+W   I+IGYL F  + L
Sbjct: 121 CRFPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRRSSRIWVWPIAIGYLFFKIMFL 172

[Close]

BLAST of Sed0009624 vs. NCBI nr
Match: XP_023554742.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.5 bits (667), Expect = 5.1e-66
Identity = 131/170 (77.06%), Postives = 145/170 (85.29%), Query Frame = 0


Query: 1   MTNNSALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACG 60
           M NN ALF  ILLI  S+AA+ R+P  + QS  G +ELWCVAKNNADDASLQSALDWACG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQS--GATELWCVAKNNADDASLQSALDWACG 60

Query: 61  AGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGN 120
           AGGA+CSPIQPGGACYD ++VQNMASFAFNDYF KHGMTDDSCFFQN+AA+TSLNPS+GN
Sbjct: 61  AGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGN 120

Query: 121 CRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYLCF 171
           CR P+S LRNGNFSSQ+ SVGLGPSEDISGSGR SGR W   + IGYL F
Sbjct: 121 CRIPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRSWVWPMVIGYLFF 168

[Close]

BLAST of Sed0009624 vs. ExPASy Swiss-Prot
Match: Q9M2K6 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35
Identity = 76/138 (55.07%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 37  ELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKH 96
           ELWCVAKNNA+D+SLQ+A++WACG GGA+C PIQ GG C DPTDVQ MASF FN+Y+LK+
Sbjct: 39  ELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKN 98

Query: 97  GMTDDSCFFQNSAALTSLNPSFGNCRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSG 156
           G  D++C F N+AALTSLNPS G C++PSS   N    +  TS+G G + D+S  GR   
Sbjct: 99  GEEDEACNFNNNAALTSLNPSQGTCKYPSSKGANNGRLADDTSMGAGQA-DMSRGGRPIS 158

Query: 157 RVWACSISIGYLCFVFLT 175
             W  +  IG+   + +T
Sbjct: 159 SSWMVTF-IGFGSLLTMT 174

[Close]

BLAST of Sed0009624 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 102.1 bits (253), Expect = 6.8e-21
Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 36  SELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLK 95
           ++ +C+A +  D  +LQ+ALDWACG G +NCS IQPG +CY P +V+  ASFAFN Y+ K
Sbjct: 378 NQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQK 437

Query: 96  HGMTDDSCFFQNSAALTSLNPSFGNCRFPSS 127
            G    SC F+  A +T+ +PS G+C FP S
Sbjct: 438 EGRASGSCDFKGVAMITTTDPSHGSCIFPGS 468

[Close]

BLAST of Sed0009624 vs. ExPASy Swiss-Prot
Match: Q94CD8 (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.8e-21
Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 35  GSELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFNDYFL 94
           GS ++CVAK +ADD  L   L+WACG G ANC+ IQPG  CY P DV++ ASFAFNDY+ 
Sbjct: 358 GSSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQ 417

Query: 95  KHGMTDDSCFFQNSAALTSLNPSFGNCRFPSSL---LRNGNFSSQSTSVGLGPSEDISGS 152
           K      +C F  +A  T+ +PS+  C +  SL     NGNF   +    LGP+  + G+
Sbjct: 418 KMKSAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGNFPPDA----LGPASPLGGN 473

[Close]

BLAST of Sed0009624 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-18
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 32  GGGGSELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFND 91
           GGGG++ WC+A + A    LQ+ALDWACG G  +CS +QP   C++P  V + AS+AFN 
Sbjct: 384 GGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNT 443

Query: 92  YFLKHGMTDDSCFFQNSAALTSLNPSFGNCRF 124
           Y+ + G +   C F  ++     +PS+GNC +
Sbjct: 444 YYQQSGASSIDCSFNGASVEVDKDPSYGNCLY 475

[Close]

BLAST of Sed0009624 vs. ExPASy Swiss-Prot
Match: Q9ZU91 (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 9.3e-18
Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 36  SELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLK 95
           ++ +C+AK   D   LQ+ALDWACG G  +CS +  G +CY+P DV   +++AFN Y+ K
Sbjct: 357 NQTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQK 416

Query: 96  HGMTDDSCFFQNSAALTSLNPSFGNCRFPSSLLRNGNFSSQSTSVGLGPSEDISGSG 153
            G    SC F+  A +T+ +PS G C FP S   N    + +++  L PS + + SG
Sbjct: 417 MGKASGSCDFKGVATVTTTDPSRGTCVFPGSAKSNQTLGNNTSA--LAPSANSTTSG 471

[Close]

BLAST of Sed0009624 vs. ExPASy TrEMBL
Match: A0A1S3BN12 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Cucumis melo OX=3656 GN=LOC103491346 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.8e-67
Identity = 131/168 (77.98%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MTNNSALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACG 60
           M  N +LF  ILLIP + A   RRP I+ QS G  +ELWCVAKNNADDASLQSALDWACG
Sbjct: 1   MPINFSLFLLILLIPCTAADPWRRPSIRDQS-GAATELWCVAKNNADDASLQSALDWACG 60

Query: 61  AGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGN 120
           AGGA+CSPIQPGG+CYD TDVQNMASFAFNDYF KHGMTDDSCFFQNSAA+TSLNPSFGN
Sbjct: 61  AGGADCSPIQPGGSCYDATDVQNMASFAFNDYFRKHGMTDDSCFFQNSAAITSLNPSFGN 120

Query: 121 CRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYL 169
           CRFPSS+LRNGNFSSQ+TSVGLGPSED+SGS    GR W   + IGYL
Sbjct: 121 CRFPSSVLRNGNFSSQTTSVGLGPSEDMSGSAHNLGRAWVWPMVIGYL 167

[Close]

BLAST of Sed0009624 vs. ExPASy TrEMBL
Match: A0A6J1JNE0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486269 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.5e-66
Identity = 134/175 (76.57%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MTNNSALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACG 60
           M  N ALF  I+ I L +AA+ + P IK Q  GG +ELWCVAKNNADDASLQSALDWACG
Sbjct: 1   MPINFALFLLIVPI-LCSAAEPQHPSIKGQ--GGATELWCVAKNNADDASLQSALDWACG 60

Query: 61  AGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGN 120
           AGGA+CSPIQP GACYD ++VQNMASFAFNDYFLKHGMTDDSCFFQNSAA+TSLNPS+GN
Sbjct: 61  AGGADCSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAVTSLNPSYGN 120

Query: 121 CRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYLCFVFLTL 176
           CRFPSS LRNGNFSSQSTSVGLGPSED+SGSGR S R+W   I+IGYL F  + L
Sbjct: 121 CRFPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRRSSRIWVWPIAIGYLFFKIMFL 172

[Close]

BLAST of Sed0009624 vs. ExPASy TrEMBL
Match: A0A6J1GMC7 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455276 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66
Identity = 131/170 (77.06%), Postives = 145/170 (85.29%), Query Frame = 0


Query: 1   MTNNSALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACG 60
           M NN ALF  ILLI  S+AA+ R+P  + QS  G +ELWCVAKNNADDASLQSALDWACG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQS--GATELWCVAKNNADDASLQSALDWACG 60

Query: 61  AGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGN 120
           AGGA+CSPIQPGGACYD ++VQNMASFAFNDYF KHGMTDDSCFFQN+AA+TSLNPS+GN
Sbjct: 61  AGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGN 120

Query: 121 CRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYLCF 171
           CR P+S LRNGNFSSQ+ SVGLGPSEDISGSGR SGR W   + IGYL F
Sbjct: 121 CRIPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRSWVWPMVIGYLFF 168

[Close]

BLAST of Sed0009624 vs. ExPASy TrEMBL
Match: A0A6J1EY09 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437228 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 7.3e-66
Identity = 131/170 (77.06%), Postives = 145/170 (85.29%), Query Frame = 0


Query: 6   ALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACGAGGAN 65
           ALF  I LI + +AA+ + P IK Q  GG +ELWCVAKNNADDASLQSALDWACGAGG++
Sbjct: 6   ALFLLIALI-ICSAAEPQHPSIKGQ--GGATELWCVAKNNADDASLQSALDWACGAGGSD 65

Query: 66  CSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGNCRFPS 125
           CSPIQP GACYD + VQ MASFAFNDYFLKHGMTDDSCFFQNSAA+TSLNPS+GNCRFPS
Sbjct: 66  CSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPS 125

Query: 126 SLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYLCFVFLTL 176
           S LRNGNFSSQSTSVGLGPSED+SGSGR SGR+W   I+IGYL F  + L
Sbjct: 126 SSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFL 172

[Close]

BLAST of Sed0009624 vs. ExPASy TrEMBL
Match: A0A0A0KHV2 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G420530 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.8e-65
Identity = 130/163 (79.75%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 6   ALFFFILLIPLSTAADLRRPWIKAQSGGGGSELWCVAKNNADDASLQSALDWACGAGGAN 65
           +LF  ILLIP  TA    RP I+ QS    SELWCVAKNNADDASLQSALDWACGAGGA+
Sbjct: 6   SLFLLILLIP-CTAPHPSRPSIRDQS-AAASELWCVAKNNADDASLQSALDWACGAGGAD 65

Query: 66  CSPIQPGGACYDPTDVQNMASFAFNDYFLKHGMTDDSCFFQNSAALTSLNPSFGNCRFPS 125
           CSPIQPGG+CYD TDVQNMASFAFNDYF KHGMTDDSCFFQNSAA+TSLNPSFGNCRFPS
Sbjct: 66  CSPIQPGGSCYDSTDVQNMASFAFNDYFRKHGMTDDSCFFQNSAAITSLNPSFGNCRFPS 125

Query: 126 SLLRNGNFSSQSTSVGLGPSEDISGSGRTSGRVWACSISIGYL 169
           S+LRNGNFSSQ+TSVG+ PSED+SGS RTSGR W   + IGYL
Sbjct: 126 SVLRNGNFSSQTTSVGIEPSEDLSGSPRTSGRAWVWPVVIGYL 166

[Close]

BLAST of Sed0009624 vs. TAIR 10
Match: AT3G58100.1 (plasmodesmata callose-binding protein 5 )

HSP 1 Score: 151.0 bits (380), Expect = 9.1e-37
Identity = 76/138 (55.07%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 37  ELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLKH 96
           ELWCVAKNNA+D+SLQ+A++WACG GGA+C PIQ GG C DPTDVQ MASF FN+Y+LK+
Sbjct: 39  ELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKN 98

Query: 97  GMTDDSCFFQNSAALTSLNPSFGNCRFPSSLLRNGNFSSQSTSVGLGPSEDISGSGRTSG 156
           G  D++C F N+AALTSLNPS G C++PSS   N    +  TS+G G + D+S  GR   
Sbjct: 99  GEEDEACNFNNNAALTSLNPSQGTCKYPSSKGANNGRLADDTSMGAGQA-DMSRGGRPIS 158

Query: 157 RVWACSISIGYLCFVFLT 175
             W  +  IG+   + +T
Sbjct: 159 SSWMVTF-IGFGSLLTMT 174

[Close]

BLAST of Sed0009624 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-23
Identity = 64/139 (46.04%), Postives = 80/139 (57.55%), Query Frame = 0


Query: 32  GGGGSELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFND 91
           GG GS  WC+AK NA   SLQ ALD+ACG GGA+C  IQ G ACY+P  +++ ASFAFN 
Sbjct: 141 GGVGSGQWCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNS 200

Query: 92  YFLKHGMTDDSCFFQNSAALTSLNPSFGNCRF----------PSSLLRNGNFSSQSTSVG 151
           Y+ KH    DSC F  +A LTS +PS G+C F          P S +   +FSS  +S  
Sbjct: 201 YYQKH-PGSDSCNFGGAAQLTSTDPSKGSCHFSSSSGTVSTSPPSQMSPPDFSSPPSSTY 260

Query: 152 ----LGPSEDISGSGRTSG 157
                 P+  I+GSG   G
Sbjct: 261 PPPITTPTTGITGSGPPFG 278

[Close]

BLAST of Sed0009624 vs. TAIR 10
Match: AT1G11820.2 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.9e-22
Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 36  SELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFNDYFLK 95
           ++ +C+A +  D  +LQ+ALDWACG G +NCS IQPG +CY P +V+  ASFAFN Y+ K
Sbjct: 378 NQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQK 437

Query: 96  HGMTDDSCFFQNSAALTSLNPSFGNCRFPSS 127
            G    SC F+  A +T+ +PS G+C FP S
Sbjct: 438 EGRASGSCDFKGVAMITTTDPSHGSCIFPGS 468

[Close]

BLAST of Sed0009624 vs. TAIR 10
Match: AT3G13560.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.9e-22
Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 35  GSELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFNDYFL 94
           GS ++CVAK +ADD  L   L+WACG G ANC+ IQPG  CY P DV++ ASFAFNDY+ 
Sbjct: 358 GSSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQ 417

Query: 95  KHGMTDDSCFFQNSAALTSLNPSFGNCRFPSSL---LRNGNFSSQSTSVGLGPSEDISGS 152
           K      +C F  +A  T+ +PS+  C +  SL     NGNF   +    LGP+  + G+
Sbjct: 418 KMKSAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGNFPPDA----LGPASPLGGN 473

[Close]

BLAST of Sed0009624 vs. TAIR 10
Match: AT3G13560.3 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.9e-22
Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 35  GSELWCVAKNNADDASLQSALDWACGAGGANCSPIQPGGACYDPTDVQNMASFAFNDYFL 94
           GS ++CVAK +ADD  L   L+WACG G ANC+ IQPG  CY P DV++ ASFAFNDY+ 
Sbjct: 358 GSSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQ 417

Query: 95  KHGMTDDSCFFQNSAALTSLNPSFGNCRFPSSL---LRNGNFSSQSTSVGLGPSEDISGS 152
           K      +C F  +A  T+ +PS+  C +  SL     NGNF   +    LGP+  + G+
Sbjct: 418 KMKSAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGNFPPDA----LGPASPLGGN 473

The following BLAST results are available for this feature:

BLAST of Sed0009624 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877601.1	8.5e-69	81.55	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Benincasa hispida]	[more]
XP_008449471.1	7.9e-67	77.98	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis melo]	[more]
XP_023529864.1	7.9e-67	78.24	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022989094.1	3.0e-66	76.57	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita maxima]	[more]
XP_023554742.1	5.1e-66	77.06	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita pepo subsp. p...	[more]

BLAST of Sed0009624 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2K6	1.3e-35	55.07	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5...	[more]
O65399	6.8e-21	49.45	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
Q94CD8	6.8e-21	45.00	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 ...	[more]
Q8VYE5	2.4e-18	42.39	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360...	[more]
Q9ZU91	9.3e-18	39.32	Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 ...	[more]

BLAST of Sed0009624 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BN12	3.8e-67	77.98	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Cucumis melo OX=3656 GN=LOC103491346 ...	[more]
A0A6J1JNE0	1.5e-66	76.57	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1GMC7	2.5e-66	77.06	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1EY09	7.3e-66	77.06	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita moschata OX...	[more]
A0A0A0KHV2	2.8e-65	79.75	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G420530 PE=4 SV=...	[more]

BLAST of Sed0009624 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58100.1	9.1e-37	55.07	plasmodesmata callose-binding protein 5	[more]
AT1G29380.1	3.4e-23	46.04	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G11820.2	4.9e-22	49.45	O-Glycosyl hydrolases family 17 protein	[more]
AT3G13560.1	4.9e-22	45.00	O-Glycosyl hydrolases family 17 protein	[more]
AT3G13560.3	4.9e-22	45.00	O-Glycosyl hydrolases family 17 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 38..123 e-value: 1.2E-42 score: 157.7
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 38..109 e-value: 1.1E-19 score: 70.8
None	No IPR available	GENE3D	1.20.58.1040		coord: 35..135 e-value: 2.2E-10 score: 42.8
None	No IPR available	PANTHER	PTHR31044:SF80	PLASMODESMATA CALLOSE-BINDING PROTEIN 5	coord: 17..159
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 17..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009624.1	Sed0009624.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma