Sed0009591 (gene) Chayote v1

Overview


Name	Sed0009591
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA polymerase delta subunit 4
Location	LG05: 3983974 .. 3985716 (+)
RNA-Seq Expression	Sed0009591
Synteny	Sed0009591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAAATTTGAAAAGCGATCAGAAAAGAGAGAAAAATGGCGTCTGCTCGAGGAGGGATGAAAGATTTCTACAAGCAAAGGAAAAATGGCGGAATCACCAAAGCCAACAACAAGGCTCCAAAGCCAGCTTCCAGAAAAACCAAATCTCCGGCCAACTCTGCCACTCTGGGCTCCGGTACCACCCAACCGGCGGCTCTCATTTCTCACGGCTCCCTCGATCTTCAAGGTTTGTTTGCTTGATTAGGTTACTTGGAACTGTAATTTCTGTTGTGGAATATTGGCCCTCGTTGATGCGAAGGATTGAGCATGTTGGATTTGAGAAGTTTTTCGAAATCGATTGCCTGTTTACATTACGATTGAGTTGTTCAATAGTTGACCTAAATTCTCTCAATGTTTGGATTCTTGTAATGTCTCGGCTGAAGAATATGATCGAGCTAAAATGTTTAGTCTTATGCCTCGTGATAATGCAGGATTTAGGCACGTAGCAGTCTAGATTCTAGAACTTGTTGGGTGTCCTGTAAATAATTGGATAGTTGAATTAAGAACATCCATTGTTTTATTTTTATTTTTTTTTAATTTTTTACTGCAAGATGTTGTATAATTAATATGTTTAGAATTTTTCTTCATGGTTATGAAGGAAATGTAGTCAAGTGTTTGTGGGATACATACAGTTACTATTTCTATTTGTTCTGCAATAGCTGCATTGTGGTCACATAGGCTTCGGTTCCATTTCGTTGTCATTTGGTTCTTGAAAGTTGCCTTGGTTTTTGCATCATTTTTTTCTTTTTTTTTTTTTTTGAAACAAAGGTAACCATGCTCGTCTCTAGGCCAGGCACCGGAGACATCGAAGGAGTAATGTCATAAGTAAGTCTCGAACCTAAGACCTTAAAGGGAGCATACCTTTTAAGCCCAAGTCTTCAACCGTTATGTCACCCCTTGGGAACACATCATTTTTTTCTATTTATCATGGTAACTTGACTAAAGATGAATTTGTATTTGTATGCTTAATTTTCAAAACCTTTAAATACATATTCTATTAGTTACGAAAAGGGTGCCTTGATGTTCGACAACAATTAGGGTGGAAGATTTGAATCCATGACCCTCTTATACCGTCGAGCTATTACTCTTTTTGGCTAATGCCCTGATGTTTAGATTTCTTTGAACTCTTCTGTTATCTGAATTATGTTTGGACATCTGATATGGTGGGATATTTATGTACTTTTACTTCATCAATTTTTATGAACTGCATTTTGTTCCATTTTGTATTGTGAGTTTGTTTTAGATGAATATGGCGAGTCAGAGAACAGGGTGAGGCAATTTGACATGAACATGACCTATGGACCTTGCCTCGGAATGACCAGAATGGAACGATGGGATCGTGCCTGTAATCTTGGTTTGAACCCTCCAAAAGCGATCGAAAAACTCTTGAAGGCTGGGAAAGTGCAGTTAGAGTGCTTGTGGGGTTCCCGAGTTTGAAGACTGTGAAGTAAGCTGTGTTGTCTTTGGTTAATGTATGAAGTGTATGCTATGATGTGCTGTTTTTTGTTAACGTATGGAGTGTATGCTGTGTTTTTGGACAAAATGTTCAACCTCTGGCTGAAATGACAATCACTTTCCTTAAAGATGTGAATGAACGAGATGTTTACTGACTTTTCAGTTATGTGTTGCAAACCTCTATCAAGCACTTGTATACTTAAATTTGGTGATCTTTTCCCTTTAACTTAACTTTGTCTTATTTCTGAAA

mRNA sequence

TCAAAATTTGAAAAGCGATCAGAAAAGAGAGAAAAATGGCGTCTGCTCGAGGAGGGATGAAAGATTTCTACAAGCAAAGGAAAAATGGCGGAATCACCAAAGCCAACAACAAGGCTCCAAAGCCAGCTTCCAGAAAAACCAAATCTCCGGCCAACTCTGCCACTCTGGGCTCCGGTACCACCCAACCGGCGGCTCTCATTTCTCACGGCTCCCTCGATCTTCAAGATGAATATGGCGAGTCAGAGAACAGGGTGAGGCAATTTGACATGAACATGACCTATGGACCTTGCCTCGGAATGACCAGAATGGAACGATGGGATCGTGCCTGTAATCTTGGTTTGAACCCTCCAAAAGCGATCGAAAAACTCTTGAAGGCTGGGAAAGTGCAGTTAGAGTGCTTGTGGGGTTCCCGAGTTTGAAGACTGTGAAGTAAGCTGTGTTGTCTTTGGTTAATGTATGAAGTGTATGCTATGATGTGCTGTTTTTTGTTAACGTATGGAGTGTATGCTGTGTTTTTGGACAAAATGTTCAACCTCTGGCTGAAATGACAATCACTTTCCTTAAAGATGTGAATGAACGAGATGTTTACTGACTTTTCAGTTATGTGTTGCAAACCTCTATCAAGCACTTGTATACTTAAATTTGGTGATCTTTTCCCTTTAACTTAACTTTGTCTTATTTCTGAAA

Coding sequence (CDS)

ATGGCGTCTGCTCGAGGAGGGATGAAAGATTTCTACAAGCAAAGGAAAAATGGCGGAATCACCAAAGCCAACAACAAGGCTCCAAAGCCAGCTTCCAGAAAAACCAAATCTCCGGCCAACTCTGCCACTCTGGGCTCCGGTACCACCCAACCGGCGGCTCTCATTTCTCACGGCTCCCTCGATCTTCAAGATGAATATGGCGAGTCAGAGAACAGGGTGAGGCAATTTGACATGAACATGACCTATGGACCTTGCCTCGGAATGACCAGAATGGAACGATGGGATCGTGCCTGTAATCTTGGTTTGAACCCTCCAAAAGCGATCGAAAAACTCTTGAAGGCTGGGAAAGTGCAGTTAGAGTGCTTGTGGGGTTCCCGAGTTTGA

Protein sequence

MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSLDLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLECLWGSRV

Homology

[Close]

BLAST of Sed0009591 vs. NCBI nr
Match: XP_038875328.1 (DNA polymerase delta subunit 4 [Benincasa hispida])

HSP 1 Score: 212.2 bits (539), Expect = 2.6e-51
Identity = 104/127 (81.89%), Postives = 112/127 (88.19%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MASARGG+KDFYKQRKN GI+KAN+KA KP+SRK KSPANSA+LGS   QPAALISHGSL
Sbjct: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DLQD+YG  EN +RQFDMNM YGPCLGMTRM RW+RACNLGLNPPK IE LLKA KVQLE
Sbjct: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120

Query: 121 CLWGSRV 128
           CLW SRV
Sbjct: 121 CLWDSRV 127

[Close]

BLAST of Sed0009591 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa] >TYK00302.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-49
Identity = 102/127 (80.31%), Postives = 112/127 (88.19%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MAS RGG+KDFYKQRK+ GI+KA  KA KP+SRKTKSPANSA+LGS   QPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DLQD+YGESEN +RQFDMNM YGPCLGMTRM RW+RAC+LGLNPPK I  LLKAGKVQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWGSRV 128
           CLW SRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Sed0009591 vs. NCBI nr
Match: XP_004143634.1 (uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_000175 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 4.5e-48
Identity = 100/127 (78.74%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MAS RGG+KDFYKQRK+ GI+KA  KA KP+SRKTKSPANSA+LGS   QPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSDAVQPAALVSHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DLQD+YG SEN +RQFDMN  YGPCLGMTRM RW+RAC+LGLNPPK I  LLKAGKVQLE
Sbjct: 61  DLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWGSRV 128
           CLW SRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Sed0009591 vs. NCBI nr
Match: KAG6605696.1 (DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035605.1 DNA polymerase delta subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.1 bits (497), Expect = 1.9e-46
Identity = 98/127 (77.17%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MASARGGMKDFYKQRKN G++K +    KP+SRKTKS ANSATL S   QPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVS----KPSSRKTKSRANSATLDSDAVQPAALISHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DL+D+YGESEN +RQFDMNM YGPCLGMTRMERW+ A  LGLNPPK IE LLK GKVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLE 120

Query: 121 CLWGSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Sed0009591 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata])

HSP 1 Score: 194.9 bits (494), Expect = 4.2e-46
Identity = 98/127 (77.17%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MASARGGMKDFYKQRKN G++K +    KP+SRKTKS ANSATL S   QPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVS----KPSSRKTKSRANSATLDSDGVQPAALISHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DL+D+YGESEN +RQFDMNM YGPCLGMTRMERW+ A  LGLNPPK IE LLK GKVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 CLWGSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Sed0009591 vs. ExPASy Swiss-Prot
Match: Q9HCU8 (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 63  QDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKA--GKVQLE 122
           +DE       +RQFD+   YGPC G+TR++RW RA  +GL PP  + ++LK   G  + +
Sbjct: 39  RDEEEAELELLRQFDLAWQYGPCTGITRLQRWCRAKQMGLEPPPEVWQVLKTHPGDPRFQ 98

Query: 123 C-LW 124
           C LW
Sbjct: 99  CSLW 102

[Close]

BLAST of Sed0009591 vs. ExPASy Swiss-Prot
Match: Q3T0X9 (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 73  VRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKA--GKVQLEC-LW 124
           +RQFD+   YGPC G+TR++RW RA  +GL PP  + ++L++  G  + +C LW
Sbjct: 49  LRQFDLAWQYGPCTGITRLQRWHRAEQMGLKPPPEVHQVLQSHPGDPRFQCSLW 102

[Close]

BLAST of Sed0009591 vs. ExPASy Swiss-Prot
Match: Q9CWP8 (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 31/85 (36.47%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 30  PASRKTKSPANSATLGSGTTQPAALISHGSLDLQDEYGESENRVRQFDMNMTYGPCLGMT 89
           P  +K + P      G    + A  +   +  L  E  E E  +RQFD+   YGPC G+T
Sbjct: 12  PVVKKREGPP-----GHSKGELAPELGEDTQSLSQEETELE-LLRQFDLAWQYGPCTGIT 71

Query: 90  RMERWDRACNLGLNPPKAIEKLLKA 115
           R++RW RA  +GL PP  + ++LKA
Sbjct: 72  RLQRWSRAEQMGLKPPLEVYQVLKA 90

[Close]

BLAST of Sed0009591 vs. ExPASy Swiss-Prot
Match: O59835 (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0


Query: 73  VRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLL 113
           +  FD    YGP LGMTRM+RW RA N  LNPP+ + K+L
Sbjct: 97  LHHFDTTARYGPYLGMTRMQRWKRAKNFNLNPPETVGKIL 136

[Close]

BLAST of Sed0009591 vs. ExPASy TrEMBL
Match: A0A5A7UNL0 (DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00460 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.2e-50
Identity = 102/127 (80.31%), Postives = 112/127 (88.19%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MAS RGG+KDFYKQRK+ GI+KA  KA KP+SRKTKSPANSA+LGS   QPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DLQD+YGESEN +RQFDMNM YGPCLGMTRM RW+RAC+LGLNPPK I  LLKAGKVQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWGSRV 128
           CLW SRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Sed0009591 vs. ExPASy TrEMBL
Match: A0A1S3CT23 (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.2e-50
Identity = 102/127 (80.31%), Postives = 112/127 (88.19%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MAS RGG+KDFYKQRK+ GI+KA  KA KP+SRKTKSPANSA+LGS   QPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DLQD+YGESEN +RQFDMNM YGPCLGMTRM RW+RAC+LGLNPPK I  LLKAGKVQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWGSRV 128
           CLW SRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Sed0009591 vs. ExPASy TrEMBL
Match: A0A0A0KND6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.2e-48
Identity = 100/127 (78.74%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MAS RGG+KDFYKQRK+ GI+KA  KA KP+SRKTKSPANSA+LGS   QPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSDAVQPAALVSHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DLQD+YG SEN +RQFDMN  YGPCLGMTRM RW+RAC+LGLNPPK I  LLKAGKVQLE
Sbjct: 61  DLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWGSRV 128
           CLW SRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Sed0009591 vs. ExPASy TrEMBL
Match: A0A6J1H180 (uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC111459143 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.0e-46
Identity = 98/127 (77.17%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MASARGGMKDFYKQRKN G++K +    KP+SRKTKS ANSATL S   QPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVS----KPSSRKTKSRANSATLDSDGVQPAALISHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DL+D+YGESEN +RQFDMNM YGPCLGMTRMERW+ A  LGLNPPK IE LLK GKVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 CLWGSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Sed0009591 vs. ExPASy TrEMBL
Match: A0A6J1K4T3 (uncharacterized protein LOC111491182 OS=Cucurbita maxima OX=3661 GN=LOC111491182 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.0e-45
Identity = 96/127 (75.59%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNGGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISHGSL 60
           MASARGGMKDFYKQRKN G++K +    KP+S KTKS A+SATL S   QPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVS----KPSSGKTKSRASSATLDSDGVQPAALISHGSL 60

Query: 61  DLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKVQLE 120
           DL+D+YGESEN +RQFDMNM YGPCLGMTRMERW+ A  LGLNPPK IE LLK GKVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 CLWGSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Sed0009591 vs. TAIR 10
Match: AT1G09815.1 (polymerase delta 4 )

HSP 1 Score: 149.1 bits (375), Expect = 2.5e-36
Identity = 76/130 (58.46%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKN---GGITKANNKAPKPASRKTKSPANSATLGSGTTQPAALISH 60
           MA+    +K FYKQ K+   GGI+K+     KP+SRK  +P ++A  GS  TQPAALISH
Sbjct: 1   MATTAKNLKGFYKQTKSNITGGISKS-----KPSSRKV-APKHAAAQGSDVTQPAALISH 60

Query: 61  GSLDLQDEYGESENRVRQFDMNMTYGPCLGMTRMERWDRACNLGLNPPKAIEKLLKAGKV 120
           GS+DL ++Y + E  +RQFDMN+TYGPCLGMTR++RW+RA  LG+NPP  IEKLLK GKV
Sbjct: 61  GSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKV 120

Query: 121 QLECLWGSRV 128
           Q +CLW  RV
Sbjct: 121 QQDCLWQGRV 124

The following BLAST results are available for this feature:

BLAST of Sed0009591 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875328.1	2.6e-51	81.89	DNA polymerase delta subunit 4 [Benincasa hispida]	[more]
XP_008467236.1	1.1e-49	80.31	PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polym...	[more]
XP_004143634.1	4.5e-48	78.74	uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical ...	[more]
KAG6605696.1	1.9e-46	77.17	DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_022957680.1	4.2e-46	77.17	uncharacterized protein LOC111459143 [Cucurbita moschata]	[more]

BLAST of Sed0009591 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9HCU8	1.8e-07	42.19	DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1	[more]
Q3T0X9	2.4e-07	44.44	DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1	[more]
Q9CWP8	1.2e-06	36.47	DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1	[more]
O59835	1.5e-06	55.00	DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of Sed0009591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNL0	5.2e-50	80.31	DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CT23	5.2e-50	80.31	DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1	[more]
A0A0A0KND6	2.2e-48	78.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1	[more]
A0A6J1H180	2.0e-46	77.17	uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC1114591...	[more]
A0A6J1K4T3	5.0e-45	75.59	uncharacterized protein LOC111491182 OS=Cucurbita maxima OX=3661 GN=LOC111491182...	[more]

BLAST of Sed0009591 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09815.1	2.5e-36	58.46	polymerase delta 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007218	DNA polymerase delta, subunit 4	PFAM	PF04081	DNA_pol_delta_4	coord: 64..114 e-value: 2.7E-19 score: 69.8
IPR007218	DNA polymerase delta, subunit 4	PANTHER	PTHR14303	DNA POLYMERASE DELTA SUBUNIT 4	coord: 4..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..52
None	No IPR available	PANTHER	PTHR14303:SF12	DNA POLYMERASE DELTA SUBUNIT 4	coord: 4..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009591.1	Sed0009591.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0000731	DNA synthesis involved in DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0043625	delta DNA polymerase complex
molecular_function	GO:0003887	DNA-directed DNA polymerase activity