Sed0009576 (gene) Chayote v1

Overview


Name	Sed0009576
Type	gene
Organism	Sechium edule (Chayote v1)
Description	TATA-box-binding protein
Location	LG08: 8737710 .. 8746202 (+)
RNA-Seq Expression	Sed0009576
Synteny	Sed0009576

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGCGCCAAAGGGTAAAATAGGAAGGAAATAAAAAGAGAGGTGAAGAGATAAATCCCCGAACCGCACAAATCCAAAGATCCCACAAACAAATGCCGCAGTTGTTCTTCTCTTCCGAAACCAAAACTCAAAAACTCTCTCCATTTATAAACCCCCCCTTCTTCTCTTCCTCGCTATATAACATCTCGCTTTTCAAATTCTTCCCGCTTCACAATCACAATCACAATCTCAATCAATTCCTTCCTCATTCCCCCAATTTTCCCTGATTTTTTCTGTTCAGATCCACGCCAAATCCATCGCCCCATTCTAGGGTTTCCCTGTTTGCAACAGGTCTGCATTTTTTTCCCTCTCAATTTCGTTTGGGTTCTCTTCCGATCAACGGATCGTGTGTGTTGGGTTTTGATTTTGTTGGGTTTGCCTGTTTCCTTCATCGGCGGACTCCTAGGGTTTCTTTTTCATACATTTGCTTGTGCTTTTGTATGATCCTCATGTTTCTTTTGACCCTTATCGTTAATTTCATGAATCGTTGATTCCAGAAAGTGCGTCCGTGATTTTCGTACATGATGGCTGATTTCTGGATTTTACTATTTTTAGTCCATCAATGGACAGATGGGTTTTGGTTTATTTATGATTTTGAGGGTGTTTTGTTCTGTTTTTGGGCTTCGGGTAATGAGAAAACGATGAGATTTGGTGATACTACTTTTTTGTTGTCGTTGATGTTTAATTATTTTGGGGAATAAGGATTTAAGGAGTTGAATTTTTGCAGATATTTCTTATAAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTAGAAAGCACCCTTCTGGGATTGTACCTACCCTTCAGTGAGTGCTTACTTTTCCGTTCTGGCTGATGTATGATAGCTAGTTTTTAGGCCAAATTCAAGCTTTTCATCAATAAGTCATGGGTTTTTTTCTTTTTGCAATTTGCTACGAAGAAATTGGTACCGTGGACGTTTTGAATGATTTACATCCAGAAGTTGGCTTACTTAGGAAAATAGAGCAGTTTATCTTTTTCTCCTAGGCTCCTTACGTACCATATTGACCTGATGGTACTTCTAAAGTCGTCGACTTTGAATGGACAAAAATACACTCAATCTCTTTCTTCCTCCACCTCTCTCTTGCATTCACACACAAAAGGGAACACATTTGTAGATTTTGGTAATAAGAGAAAGTTAGTTTGCACTTTGCAGATCTCAGGACAAAGTTACATCCACCTGAAAATTAACAAGTTCACATATCTCCTATTAGTTCCACTAGTTACTTTATGTAGAAATATATAAATTTCGTGCATACATGAGTAGAAATAATTTTGATTTATGTGTATATATATAAAGGGAGAGAGAGAAAGAGAGAGACGAACGACTAAGATTTATGGTCTAGCTCTAGAATATTATTTTGTCACTCTGCTTAGAATAAGTCAGAAGTTTATGCCTTCTTGAAAAATTGTCATATCTAATTGTAATATGTGATAACTGTCACTGATAACTAAAATGAAAGCATTATTCTTGCTGAATTAAATTATTTTGGTAAAAACTCATGTAAACTATGGAACACGAACACGCCGTGCGACATTTGTGCACTTGTTAAGTACAGTTGAAAAGTGTCAAATATCTTTTTTTACACATCAATTTAAAATTATTGTTTCCTATCAAAACAAAAAAGTTTCAAATATCGACTCTTTATGAAGTTATGGATATCTCAAGTATTTTGGTGTAAGATATTACTCCATAAATGCATAAGAATCATAAACTAGCAATTTCTTACGTAGGATTTTTTGAAATGGATTAAAATAATACATATTTAATAAATGTATACTATAATCAATATATTTTTGACATGCCCCATGGTATATGTGTATTCTCACTTTTCCCCCTAAAATACTTATGAGTTAAAAACAATATTTTTTTCAAACAATTTTTAAGGACTCTTGCAATTGCAATATAAATTAATTTCAACATAAGTTGTAGCATGTAGATGATAGTACTACCATGAGTTTCATTTCTTCTCAGTCGTCCTTTCCAGTTTTCAACTGCAACTTAAACTGAAGAGAAACTAGTTCTTAACTAAAACTTTAACTGAATCTGAAAACTTCTTACCGGAGATTTTAGTACAAACAAGGAACTCTTTACATTAATTTTCTGGTTCATACTCCCTTTTGTGAATTATAAATATATATATTTTTTGTTTCTAGGAACATTGTGTCAACAGTGAATCTGGACTGCAAGTTGGATCTGAAGGCTATTGCACTGCAAGCTCGCAATGCTGAATACAATCCCAAGGCAAGTGGCGTTTTATGATAAGCCAATGCAGATAATTTTTGCAATTCATCATGGACGTCAAGAATCCCATTTTCAGAGTGGAGTTGTTTCCTTTTGAATTGAATTTTTAAGATTTTTAATGACAGCGTTTTGCTGCTGTTATCATGAGAATAAGAGAGCCAAAAACTACAGCACTGATATTTGCATCTGGCAAGATGGTAAGTTTTTTTTCTATCTAATTTCCTAATTAGATGAGAGTTAGCCTGCCATATTGTAGTTGCTGTCATTGATTTACATTTACTTTATTTTATTATTGTCATTAAGAGAAAGCGTTTGACCATGTTTGTGTTGGACACAAAAAAAATTTCTAACCTACAACAAGTCAAACTCCAACTATAAAAACTATAGCCAACCTCTGATGCTTAAAGATTTAAGATTAAAACATCACTACAGCTGCAAAAGAATATAAATTAAGAAAAATGTTTTAAGCTAACATCCCCTCACCTGTGGATATGTAACCTCCCCGGGCTGTTTTCCACTTCCCGACATTCCGGAACCACCTGCATGTAACACAACTCACTTAATTTCCCATTAAGTTCAACTCTAGCAGCTCCTGCTTCATTATGCCATAGATATAAATAGCAAGACATTAGGAAAAAAAAAAATTAAAAAACCCCCTAGAGTCCGCAGTTACCCCTGCCCGAGCACACCCGTCGCTTAAAATTCAATTAAATCCCTTACCTTCTTCCTCCAAATTGAAAACGCTTGAGAACCTACCCTCGCTTGATCGTTCCCCCTTCCTTTAAGTGAGTTCCTCGACCTTCAACATATTCAAAAGAAGGAAATTCCTTTAATTCTCCATACCGACAGTTCACTCTTATTTTTATTATTGTCATTAAGAGAATGACTTTGACCATGTTTGTGTTGGGCACAAAAAATTTTGGACAAGATGGGTCGCGTTCTGACATGCATAGGGGACATAATGACCTGAAGAACTAAAATGTTGATGAGAAAAAAAGGAAAACTAATGTACCCACCCAGTACTTGTGTTACTAAGAACGGTAAAAACCCGGTAATTATGGTGGGAGGTCCATCTCGTTTCCTTTTTTTATGCCTGTTGCCACTGGCATTACATTCTTTGAATGTTAACTTTACTGGCTGTATATATTTGAAAGTACTGAATATATTTCCCAATGTTGCTGTTCTGTATCCTACAACTATTTTAGAAATTTCCGTGCCATGTGTTATGTTGTATCTATGTCCTGTTTTCATGTTAGTATTCGTGTCAACTTACACTCATTTCGATTATTTTTACGAGACAAACCGACTGATTCTAAAGAAAACCTATAGGAAATTAATATCTTGGTAGGCGGGCACCATGCTACTCTAACCTCTTATAGTTCAAATTCAAAAAGGGAAAGAACCAACATGGAAGACACTACTAAGGCATAATAGCCTTGACCAAAAGATCATGGGGTTCGAGTGAGTCCTACCCTCTACCTAGGGTTGATCTAATCAAAACCATAGCCTCAAATATTTTTTCATAGGAAACAAAACAATATCATTGATAAGTGAAATAATTAAAAAAACCATAACCTCAAATGTATATATTTTTGCACAAGTTTTAAACAAACCGAATTCAAGTCCGCAAGGGGCAGTCTCAACGGTAGAGGCTTGGTCTCCAAGCTATGCTCCCTTGGAGGTTCCAAGTTTGAAACTCACGTGTGAATTTAACTATAAAATCCCTTGTTATCTCTTGGACCTTGGGATAATTGAGGGTGCCCTAGGTATACAGTAAAAACAAAAAACAAATTTAAACCTATATATGTGGGTGTATATAAAATCTATTCTGTTATTCTTTTCACGAATTTAGATCAAGTGAAAAGTCTTGTGTGCTATACTTCTAAGGATGGATTCTTTTCCTTGTAAATCTGACTGTTGCACTTTTAGATTACTTCGTTGATTCTGATGCATGTGGTGTAGGTCTGTACCGGAGCTAAGAGTGAACAACAGTCAAAATTAGCAGCAAGAAAGGTATTTAATTTTTTTCATATGTTCTATCTTAGTTTGTAGTTGTAAACTCATTTTACATGCCCTAATTCAGTTAATTAGTTAATTTGAATTATGACGTTCAAGGCTTACAGATTTTATTGTATCTAAAATATTAAAAAAATGAAATAAAATAAATATTGACTGAAGACCTCAAATTATGGGCCAAAAATTAGAGGTATGAACTGAGTTATGGTCGTTTTTTTAATTTGCAGAATTGTTGATAGTTTATTTTTGCTAAAGAATGTATATATACATAGTTATTATTGGTGCATCATATTATCTGAGATAAATCCGTCATAGCGGAGCCATTAATCACAGAGAAAAACTTGCCTCCTTAGCTAAGGAGGCAAGCCCTCCTTAAAAGGGGTATGTGGCATCATTTGGTGTCACAAATTTTTTGTTTAGACAATTCTATTTTTAAAATAAAAAAAAATTTGTGGCACCAAATGGTGCCACATACTTCTTTTAAGGAGGGCTTGCCTCCTTAGCTAAAGAGGCAAGTTTTTCTCTTAATCACAGTCAGTTGGCGTTCAGTTAATTGATTTTCTTATTAATCTAAAGGCTGTTGGGCATCTCATGCAAGTAACACCCCATGCAAGTAACACCCTTTTTTAATATGAAGCTATTTTTATCTGATTTATTCCATGTTTCCACTTTTCAGTATGCCCGAATTATTCAAAAACTTGGTTTTCCTGCCAAGTTCAAGGTACGTGCTTCTCTCCCCCTCTCGTGTACGCACTGCAATGGCATCTGAAGCTACTTCAGATTTTTCTAAAAAAACAGAAAGCATCTTTCAATAATAATAAAAAAGACAAAAGAGAGGGATGATGAGATACACGCCATTCAGATTAAATACCTTTACTTTTGCATGCATAGCACTGCAAATGCCGACGGGCAGATTTTTAGATTCACAATCTCATTCATATATAAGTTTGAACATGGCAATAGTGAATTTTACCTTATGACGTGTTTTTAATCTGCTGTAGGATTTTAAGATTCAGAATATTGTTGGCTCTTGCGATGTTAAATTCCCCATAAGGCTGGAGGGTCTTGCATATTCTCACGGTGCCTTTTCAAGTGTAAGTTCTAGATCTTCATTTTGGTCTCTATATGTATTCCATGGGAACGTTTCTATGTCCACTTCATTAAATTTTTTAGATTCTAGAGGACCATAGTCATGTTCAAGCATTTTACTGCTATAAATCCCGGCCTTTTCTGGTATATTCTTTGTGGGGGATGACTTGAATGAATGTGTAATGTGTTTTACTATGATCTTCTGATTATTTTCAAGCCATTCTGTGCATGTACAATTATATGTGTAATGTGTTTTACTATGATCTTCTGATTATTTTCAAGCCATTCTGTGCATGTACAATTATATGTGTAATGTGTTTTACTATGATCTTCTGATTATTTTCAAGTCATTCTGTGCATGTTCAATTATATGTGTATGTGTTATGTGTTTTACTACGATCTTCTGATTATTTTCAAGTCATTCTGTGTTTTGTATTTGACATGCATCGACTAGTATGTGATGGACACTGAGGCTTGTGCGTTTTGTGTAATGTATCTTAATTATTTGTCGGAATAATGTTTTCTAGTAATGATATCCTTGAGAGTTATTATTTTCAACGTTTAAATTTTTTCATTGTAATTGATATTCACATTCACTATATAATTTAATAGGTTAAATACTATATTCTGATGTTGATTTTTGTAGATATATGGAACGCAACTTCGTTATTAAAACCTTGATCTCCATTTTTTTCAGTACGAACCAGAGTTATTTCCTGGATTGATTTATAGGATGAAACAACCAAAGATTGTGCTCCTCATCTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTAATACTTGATTGCCATTTCCTTTCTTGTTAGTACTTAATTACCTTTGCTGGGTTGAGTTGGGGATAATTTTGGGCCAAACTTTCCTAACCCAACCCAACCCTATATTTTCGGGTTGGGTTCATTGATTCACACAAAATACATAATTTTTTTTTAAATATCGTAGGTAAAAATGTTAGCTGTTGGTGTTGGTCTCGAACCTGAGAGTTTTAAGTATATGTTTTTTGTTAAAAAAATTAATAAAGGAAAGTGTTGCAACCCCAGCTTGAACTTGAGGAGGTCAGAAAGTAGACAGAACACTCTACCACCATGCCACTGGTCTGTTTTCATAACATTTTAACAAATATAATATATATTGGTTCTGGTTGAACCGAGCCAAATTACGTCAACCCAGAACCGAACCAAACATTTCGGTTCTCCCTGATCTTCACCCAACCTAACTTAGCGCAACCCTTATGATTAGTGGTCCGGGTTTGTCCACCCCTACCATTACCTGGTTAGACAACATTTTTGTAGCCTCCGGTGACCTTTTGTTTGACTTAATCTTTCCCTACCATCATTCAGTTCAGTTTTTTTCTGAATACAAAATTCTTGTTGTAATGAAAGAATCGTAGTTATTTTTTGCCTCCTAAATGAGAATATTTTTGGCACTTTATAGGATGGAAGCAACTGTTAGTAGGTAGTACGATCTTTAGTAATGGATGAAAGTTTATCAATAATGGTAATAACTGAAAGATGACAAGATATTATTGATTGTGTTCAAAATACTGTTGAGGTAGATGTTATAAACTTACAAATATTAGAATATTGAAGGCCTTTTTTATGAAACAAGTAACAAACTTTTGATTAAAATTATGAAAAGAGTCTAAAGCTCGTGGGTACAAACTCCCAAATTAGTGGGGAAAAAAATAGAACAAAATGAAAAGAAACATAATGAAAGACATAATCACATAACTAAAGGGATTTATAAGCACATCACAAAACAGAAGAGATCCTGGTAAGTATAAAGAAGCCTTTAATAAGACTGAGGCAACTCCTGCAGATTGAGGAAGAGTAAAAATAATGGTGTCGATTGAAGGTGATGAAGTTAAGAATCCAATCCAAGATTTGACTAGAAATTAACTTACGTATCAAAAGAAGAAGGTCTACTAATAATTAGCTAAAAGTTTGTTAGTTGGAGCTCTGGTAAGTAAGTGAGGGAGTAATGGGAGAGAGGATCAAGGTGTGTAATGCTTGAATTGGATATTTTACTGGTTACGATTCTCTGATTTCAATAAAATGCTTTTATTATGCATCAATTATTAAAGACTCAATTGGCACTCAAAATATGTTTTAGTATAGTTTATGGTCACACCCTCAAGGGGTGGCGCAGTGGTCGAAGACTTTAGATTTGAAGGTGTGCTCCCTCAAGGTCTCACGTTCGAAATCCACTTGTTATATTAATTTGTAGACATCTCCCGTGAATCCATTCCTTCGATGTCTCTTGGTGTCTGGCCTAGGGACGAGTGTGGTTACCCTTGTTTAAAAAAAAAGTATAGTTTGTGGTTACTTGACCAATCTTGATGAGATAATTCAACTTTACAAAAACAGAATTACAGAATTACACGACTATATCTGGACTGTCACTCAGTCCATAGTCAATCTTTGTGCATGTGAATATTCTGTGTTTTGAATCCCTCAGGTGAGAGAGGAGACATATACTGCATTTGAGAACATATATCCAGTGCTTACGGAGTTCAGGAAAAACCAGCAATGGTAAGATATGTTGTTTCTCTACCATTTATTCAATTGGTCTGAATTTTGTGCTGAACTCTCTAAAATAAAACAATTAGCTTATTGCCTGTCTAAAGAAAGCCGTGTTTGCAGATTTTTCGGGTACGGACTAGCCTTCTGGGGAGTCTATTTTTCCTTCATGCTTTTGCAACAAACTGACTGGCACACAGACAGACAGAAGCTAGCAAGAAAGATACGTATATTTATCGAAAGATCGCTTCGTATTTGAAGATATGCAGGACTTTCGTTTTTTTGGCATAAAATGTGGGGGGGTCTAGTGATATCTGTTAGTGTGTGTCTATATGAGAAACAGTTGGGGGAAAAAGTGGAACATTTTGATATTTGTTACTGATATTATGTGATCGAAGTGGGGAATTGTGTATAGAAGTTTGTCTTTTGTTCCATTAACTGATTACTAGAAGACAATTATGCAATTTATATTAAGCTTTGCAGGGCATGTGTTTAGTTCTACTTCATCAATAGAAAATAATTAGAAATTA

mRNA sequence

GAAAGCGCCAAAGGGTAAAATAGGAAGGAAATAAAAAGAGAGGTGAAGAGATAAATCCCCGAACCGCACAAATCCAAAGATCCCACAAACAAATGCCGCAGTTGTTCTTCTCTTCCGAAACCAAAACTCAAAAACTCTCTCCATTTATAAACCCCCCCTTCTTCTCTTCCTCGCTATATAACATCTCGCTTTTCAAATTCTTCCCGCTTCACAATCACAATCACAATCTCAATCAATTCCTTCCTCATTCCCCCAATTTTCCCTGATTTTTTCTGTTCAGATCCACGCCAAATCCATCGCCCCATTCTAGGGTTTCCCTGTTTGCAACAGATATTTCTTATAAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTAGAAAGCACCCTTCTGGGATTGTACCTACCCTTCAGAACATTGTGTCAACAGTGAATCTGGACTGCAAGTTGGATCTGAAGGCTATTGCACTGCAAGCTCGCAATGCTGAATACAATCCCAAGCGTTTTGCTGCTGTTATCATGAGAATAAGAGAGCCAAAAACTACAGCACTGATATTTGCATCTGGCAAGATGGTCTGTACCGGAGCTAAGAGTGAACAACAGTCAAAATTAGCAGCAAGAAAGTATGCCCGAATTATTCAAAAACTTGGTTTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCTTGCGATGTTAAATTCCCCATAAGGCTGGAGGGTCTTGCATATTCTCACGGTGCCTTTTCAAGTTACGAACCAGAGTTATTTCCTGGATTGATTTATAGGATGAAACAACCAAAGATTGTGCTCCTCATCTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATATACTGCATTTGAGAACATATATCCAGTGCTTACGGAGTTCAGGAAAAACCAGCAATGATTTTTCGGGTACGGACTAGCCTTCTGGGGAGTCTATTTTTCCTTCATGCTTTTGCAACAAACTGACTGGCACACAGACAGACAGAAGCTAGCAAGAAAGATACGTATATTTATCGAAAGATCGCTTCGTATTTGAAGATATGCAGGACTTTCGTTTTTTTGGCATAAAATGTGGGGGGGTCTAGTGATATCTGTTAGTGTGTGTCTATATGAGAAACAGTTGGGGGAAAAAGTGGAACATTTTGATATTTGTTACTGATATTATGTGATCGAAGTGGGGAATTGTGTATAGAAGTTTGTCTTTTGTTCCATTAACTGATTACTAGAAGACAATTATGCAATTTATATTAAGCTTTGCAGGGCATGTGTTTAGTTCTACTTCATCAATAGAAAATAATTAGAAATTA

Coding sequence (CDS)

ATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTAGAAAGCACCCTTCTGGGATTGTACCTACCCTTCAGAACATTGTGTCAACAGTGAATCTGGACTGCAAGTTGGATCTGAAGGCTATTGCACTGCAAGCTCGCAATGCTGAATACAATCCCAAGCGTTTTGCTGCTGTTATCATGAGAATAAGAGAGCCAAAAACTACAGCACTGATATTTGCATCTGGCAAGATGGTCTGTACCGGAGCTAAGAGTGAACAACAGTCAAAATTAGCAGCAAGAAAGTATGCCCGAATTATTCAAAAACTTGGTTTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCTTGCGATGTTAAATTCCCCATAAGGCTGGAGGGTCTTGCATATTCTCACGGTGCCTTTTCAAGTTACGAACCAGAGTTATTTCCTGGATTGATTTATAGGATGAAACAACCAAAGATTGTGCTCCTCATCTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATATACTGCATTTGAGAACATATATCCAGTGCTTACGGAGTTCAGGAAAAACCAGCAATGA

Protein sequence

MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQQ

Homology

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BLAST of Sed0009576 vs. NCBI nr
Match: KAG6588117.1 (TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394.0 bits (1011), Expect = 7.5e-106
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

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BLAST of Sed0009576 vs. NCBI nr
Match: XP_004144066.1 (TATA-box-binding protein [Cucumis sativus] >XP_008450995.1 PREDICTED: TATA-box-binding protein [Cucumis melo] >XP_022147635.1 TATA-box-binding protein [Momordica charantia] >XP_022933932.1 TATA-box-binding protein [Cucurbita moschata] >XP_022961121.1 TATA-box-binding protein [Cucurbita moschata] >XP_022968327.1 TATA-box-binding protein [Cucurbita maxima] >XP_022987321.1 TATA-box-binding protein [Cucurbita maxima] >XP_023515908.1 TATA-box-binding protein [Cucurbita pepo subsp. pepo] >XP_023531923.1 TATA-box-binding protein [Cucurbita pepo subsp. pepo] >XP_038879585.1 TATA-box-binding protein [Benincasa hispida] >XP_038879586.1 TATA-box-binding protein [Benincasa hispida] >KAG7023737.1 TATA-box-binding protein [Cucurbita argyrosperma subsp. argyrosperma] >KGN66345.1 hypothetical protein Csa_006854 [Cucumis sativus])

HSP 1 Score: 394.0 bits (1011), Expect = 7.5e-106
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. NCBI nr
Match: KAG6590070.1 (TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394.0 bits (1011), Expect = 7.5e-106
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. NCBI nr
Match: XP_023927294.1 (TATA-box-binding protein [Quercus suber])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 196/200 (98.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+QGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. NCBI nr
Match: TKY63619.1 (TATA-box-binding protein [Spatholobus suberectus])

HSP 1 Score: 389.8 bits (1000), Expect = 1.4e-104
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy Swiss-Prot
Match: P26357 (TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.1e-107
Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy Swiss-Prot
Match: Q42808 (TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.1e-107
Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIR+PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy Swiss-Prot
Match: P48511 (TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.6e-106
Identity = 196/200 (98.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+QGLEG+QPVD  KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy Swiss-Prot
Match: P50159 (TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.3e-105
Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+ GLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVL+EFRK QQ
Sbjct: 181 TYTAFENIYPVLSEFRKIQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy Swiss-Prot
Match: P93348 (TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.5e-104
Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+ GLEG QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEVGLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQ SKLAARKYARIIQKLGF AKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy TrEMBL
Match: A0A6J1JDU6 (TATA-box-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111484910 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.6e-106
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy TrEMBL
Match: A0A6J1H9G6 (TATA-box-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461727 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.6e-106
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy TrEMBL
Match: A0A0A0LWT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.6e-106
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy TrEMBL
Match: A0A6J1D0P6 (TATA-box-binding protein OS=Momordica charantia OX=3673 GN=LOC111016510 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.6e-106
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. ExPASy TrEMBL
Match: A0A1S3BPX8 (TATA-box-binding protein OS=Cucumis melo OX=3656 GN=LOC103492411 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.6e-106
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Sed0009576 vs. TAIR 10
Match: AT1G55520.1 (TATA binding protein 2 )

HSP 1 Score: 372.1 bits (954), Expect = 2.8e-103
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQG EG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+REE
Sbjct: 121 SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVL EFRK QQ
Sbjct: 181 TYTAFENIYPVLREFRKVQQ 200

[Close]

BLAST of Sed0009576 vs. TAIR 10
Match: AT1G55520.2 (TATA binding protein 2 )

HSP 1 Score: 372.1 bits (954), Expect = 2.8e-103
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQG EG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+REE
Sbjct: 121 SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVL EFRK QQ
Sbjct: 181 TYTAFENIYPVLREFRKVQQ 200

[Close]

BLAST of Sed0009576 vs. TAIR 10
Match: AT3G13445.1 (TATA binding protein 1 )

HSP 1 Score: 366.7 bits (940), Expect = 1.2e-101
Identity = 184/200 (92.00%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           M DQGLEG+ PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+R+E
Sbjct: 121 SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TY AFENIYPVL+EFRK QQ
Sbjct: 181 TYKAFENIYPVLSEFRKIQQ 200

[Close]

BLAST of Sed0009576 vs. TAIR 10
Match: AT3G13445.2 (TATA binding protein 1 )

HSP 1 Score: 329.7 bits (844), Expect = 1.6e-90
Identity = 166/177 (93.79%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLRKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           M DQGLEG+ PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV 178
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAKV
Sbjct: 121 SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKV 177

[Close]

BLAST of Sed0009576 vs. TAIR 10
Match: AT3G13440.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 0


Query: 1  MADQGLEGAQPVDLRKHPSGIVPT 25
          MADQGLE + P+DL KHPSGIVPT
Sbjct: 1  MADQGLEESNPMDLSKHPSGIVPT 24

The following BLAST results are available for this feature:

BLAST of Sed0009576 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588117.1	7.5e-106	99.50	TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004144066.1	7.5e-106	99.50	TATA-box-binding protein [Cucumis sativus] >XP_008450995.1 PREDICTED: TATA-box-b...	[more]
KAG6590070.1	7.5e-106	99.50	TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023927294.1	1.1e-104	98.00	TATA-box-binding protein [Quercus suber]	[more]
TKY63619.1	1.4e-104	98.00	TATA-box-binding protein [Spatholobus suberectus]	[more]

BLAST of Sed0009576 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P26357	4.1e-107	97.50	TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1	[more]
Q42808	4.1e-107	97.50	TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1	[more]
P48511	1.6e-106	98.00	TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]
P50159	2.3e-105	97.00	TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1	[more]
P93348	1.5e-104	96.50	TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Sed0009576 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JDU6	3.6e-106	99.50	TATA-box-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111484910 PE=3 SV=1	[more]
A0A6J1H9G6	3.6e-106	99.50	TATA-box-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461727 PE=3 SV=1	[more]
A0A0A0LWT4	3.6e-106	99.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1	[more]
A0A6J1D0P6	3.6e-106	99.50	TATA-box-binding protein OS=Momordica charantia OX=3673 GN=LOC111016510 PE=3 SV=...	[more]
A0A1S3BPX8	3.6e-106	99.50	TATA-box-binding protein OS=Cucumis melo OX=3656 GN=LOC103492411 PE=3 SV=1	[more]

BLAST of Sed0009576 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55520.1	2.8e-103	94.00	TATA binding protein 2	[more]
AT1G55520.2	2.8e-103	94.00	TATA binding protein 2	[more]
AT3G13445.1	1.2e-101	92.00	TATA binding protein 1	[more]
AT3G13445.2	1.6e-90	93.79	TATA binding protein 1	[more]
AT3G13440.1	1.4e-04	79.17	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000814	TATA-box binding protein	PRINTS	PR00686	TIFACTORIID	coord: 139..154 score: 86.3 coord: 158..174 score: 85.86 coord: 25..40 score: 78.59 coord: 49..68 score: 84.68 coord: 115..131 score: 82.48 coord: 68..86 score: 86.79
IPR000814	TATA-box binding protein	PFAM	PF00352	TBP	coord: 24..103 e-value: 6.4E-33 score: 112.5 coord: 112..194 e-value: 1.6E-32 score: 111.2
IPR000814	TATA-box binding protein	PANTHER	PTHR10126	TATA-BOX BINDING PROTEIN	coord: 1..200
IPR000814	TATA-box binding protein	HAMAP	MF_00408	TATA_bind_prot_arch	coord: 19..198 score: 27.844849
IPR012295	TBP domain superfamily	GENE3D	3.30.310.10		coord: 30..115 e-value: 3.3E-91 score: 305.3
IPR012295	TBP domain superfamily	GENE3D	3.30.310.10		coord: 26..195 e-value: 3.3E-91 score: 305.3
None	No IPR available	PANTHER	PTHR10126:SF48	TATA-BOX-BINDING PROTEIN 1	coord: 1..200
None	No IPR available	SUPERFAMILY	55945	TATA-box binding protein-like	coord: 21..114
None	No IPR available	SUPERFAMILY	55945	TATA-box binding protein-like	coord: 112..198
IPR030491	TATA-box binding protein, conserved site	PROSITE	PS00351	TFIID	coord: 143..192
IPR033710	TATA-box binding protein, eukaryotic	CDD	cd04516	TBP_eukaryotes	coord: 22..195 e-value: 1.63799E-131 score: 364.618

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009576.1	Sed0009576.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006366	transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016251	RNA polymerase II general transcription initiation factor activity