Sed0009564 (gene) Chayote v1

Overview
NameSed0009564
Typegene
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase domain-containing protein
LocationLG06: 33731538 .. 33732715 (+)
RNA-Seq ExpressionSed0009564
SyntenySed0009564
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTAATGTTGTTCTTTGTCCAATTCTTTATGAAAAACTTCCAGATTTCTGTTTTGAATGTGGATGTATTGGACACTTGACGAAAGAATGTCCTAAAGTGATTGAAGAAAGGCTAATTCTGCAGAAGTATGAGTATGGTGATTGGATGGGTGCACCTTATGTCAAAAAATCTGGACAAAAAACAGGAGAAGAGGGGGTTGGACAGGAAAGTCCTAAGAGAGAAAGGACTGGGGATCGTGGAGGGAGAGATGGACGTTGGGCAGAAGGAGGTAGAAGTGGAGGGGAGAGTTGGAGACGTATTATGAATGAGGAAGAGGAGGATTCTGATAAGGACATGAATGTTGTTAAGGGGAAAATAGCGAAGGCGAAGGGGGGGTTAATAGGGGATACCAGAGAGGAAAATAGTAACAACAGGGGCATTGTTGAACAGGGAGATGTTGGAGGAGGTTTGGTTTGTCTCAATAAAGAAGGGGAAAATATTATAGAAAACAGCACTTTAAGTAGGATGTGTGGGTCAGGGCCTTCTAAAATAAGTAATGATGAAGTGGGAGAGAAACAAGGGAAAGGGCATGAGGAAGCTGTTGTTAAATGTAGAATGAGAAAATTCCGGAGATTCAAAGGAGAACATATTTCTATGAATCTAGACCTGAATGCAATTCAAGTTGATAAAGGAAAGAGAAAATTAGAAGATATGGATGTGGTCGAGGAGGTGGAAGGGAAACGTGCTCGAGGTGGGTTGGTGAATTCTGTTTCTGATTTGGTGGAGGCTGATGTTCAGCCCCACCTGGAATTATGAAAATCCTAAGTTGGAATGTCCGAGGAGGGGGGAATTCTCGGGCGTTGGCTGATTTGAAGGACATACTGCGCCTTCATCATCCTCAAGTGTTGTTTTTAATGGAGACAAAATGTGGTGTTGCAAGTTTTGAGAAACTGAGAAGGCAACTTCAGTTTGATCATTGCTTCTGTATTCCGTCTATGGGGTTAAGTGGTGGCATTGGTATGCTTTGGGGGGAAGGCGTTCACATTAATGTCATTTCTTCTTCTCGTAATTACATTGATTGTAGAGTGAGCTGGGATGACATATGCTTTCGTTTTTCGGGAGTTTATGGTTTTCCTGCTTCTAATGATAAACACCTTACATGTGCTCTTCTAAGGAGGCTTTCTCCATGTTGA

mRNA sequence

ATGGAAGGTAATGTTGTTCTTTGTCCAATTCTTTATGAAAAACTTCCAGATTTCTGTTTTGAATGTGGATGTATTGGACACTTGACGAAAGAATGTCCTAAAGTGATTGAAGAAAGGCTAATTCTGCAGAAGTATGAGTATGGTGATTGGATGGGTGCACCTTATGTCAAAAAATCTGGACAAAAAACAGGAGAAGAGGGGGTTGGACAGGAAAGTCCTAAGAGAGAAAGGACTGGGGATCGTGGAGGGAGAGATGGACGTTGGGCAGAAGGAGGTAGAAGTGGAGGGGAGAGTTGGAGACGTATTATGAATGAGGAAGAGGAGGATTCTGATAAGGACATGAATGTTGTTAAGGGGAAAATAGCGAAGGCGAAGGGGGGGTTAATAGGGGATACCAGAGAGGAAAATAGTAACAACAGGGGCATTGTTGAACAGGGAGATGTTGGAGGAGGTTTGGTTTGTCTCAATAAAGAAGGGGAAAATATTATAGAAAACAGCACTTTAAGTAGGATGTGTGGGTCAGGGCCTTCTAAAATAAGTAATGATGAAGTGGGAGAGAAACAAGGGAAAGGGCATGAGGAAGCTGTTGTTAAATGTAGAATGAGAAAATTCCGGAGATTCAAAGGAGAACATATTTCTATGAATCTAGACCTGAATGCAATTCAAGTTGATAAAGGAAAGAGAAAATTAGAAGATATGGATGTGGTCGAGGAGGTGGAAGGGAAACGTGCTCGAGCCCCACCTGGAATTATGAAAATCCTAAGTTGGAATGTCCGAGGAGGGGGGAATTCTCGGGCGTTGGCTGATTTGAAGGACATACTGCGCCTTCATCATCCTCAAGTGTTGTTTTTAATGGAGACAAAATGTGGTGTTGCAAGTTTTGAGAAACTGAGAAGGCAACTTCAGTTTGATCATTGCTTCTGTATTCCGTCTATGGGGTTAAGTGGTGGCATTGGTATGCTTTGGGGGGAAGGCGTTCACATTAATGTCATTTCTTCTTCTCGTAATTACATTGATTGTAGAGTGAGCTGGGATGACATATGCTTTCGTTTTTCGGGAGTTTATGGTTTTCCTGCTTCTAATGATAAACACCTTACATGTGCTCTTCTAAGGAGGCTTTCTCCATGTTGA

Coding sequence (CDS)

ATGGAAGGTAATGTTGTTCTTTGTCCAATTCTTTATGAAAAACTTCCAGATTTCTGTTTTGAATGTGGATGTATTGGACACTTGACGAAAGAATGTCCTAAAGTGATTGAAGAAAGGCTAATTCTGCAGAAGTATGAGTATGGTGATTGGATGGGTGCACCTTATGTCAAAAAATCTGGACAAAAAACAGGAGAAGAGGGGGTTGGACAGGAAAGTCCTAAGAGAGAAAGGACTGGGGATCGTGGAGGGAGAGATGGACGTTGGGCAGAAGGAGGTAGAAGTGGAGGGGAGAGTTGGAGACGTATTATGAATGAGGAAGAGGAGGATTCTGATAAGGACATGAATGTTGTTAAGGGGAAAATAGCGAAGGCGAAGGGGGGGTTAATAGGGGATACCAGAGAGGAAAATAGTAACAACAGGGGCATTGTTGAACAGGGAGATGTTGGAGGAGGTTTGGTTTGTCTCAATAAAGAAGGGGAAAATATTATAGAAAACAGCACTTTAAGTAGGATGTGTGGGTCAGGGCCTTCTAAAATAAGTAATGATGAAGTGGGAGAGAAACAAGGGAAAGGGCATGAGGAAGCTGTTGTTAAATGTAGAATGAGAAAATTCCGGAGATTCAAAGGAGAACATATTTCTATGAATCTAGACCTGAATGCAATTCAAGTTGATAAAGGAAAGAGAAAATTAGAAGATATGGATGTGGTCGAGGAGGTGGAAGGGAAACGTGCTCGAGCCCCACCTGGAATTATGAAAATCCTAAGTTGGAATGTCCGAGGAGGGGGGAATTCTCGGGCGTTGGCTGATTTGAAGGACATACTGCGCCTTCATCATCCTCAAGTGTTGTTTTTAATGGAGACAAAATGTGGTGTTGCAAGTTTTGAGAAACTGAGAAGGCAACTTCAGTTTGATCATTGCTTCTGTATTCCGTCTATGGGGTTAAGTGGTGGCATTGGTATGCTTTGGGGGGAAGGCGTTCACATTAATGTCATTTCTTCTTCTCGTAATTACATTGATTGTAGAGTGAGCTGGGATGACATATGCTTTCGTTTTTCGGGAGTTTATGGTTTTCCTGCTTCTAATGATAAACACCTTACATGTGCTCTTCTAAGGAGGCTTTCTCCATGTTGA

Protein sequence

MEGNVVLCPILYEKLPDFCFECGCIGHLTKECPKVIEERLILQKYEYGDWMGAPYVKKSGQKTGEEGVGQESPKRERTGDRGGRDGRWAEGGRSGGESWRRIMNEEEEDSDKDMNVVKGKIAKAKGGLIGDTREENSNNRGIVEQGDVGGGLVCLNKEGENIIENSTLSRMCGSGPSKISNDEVGEKQGKGHEEAVVKCRMRKFRRFKGEHISMNLDLNAIQVDKGKRKLEDMDVVEEVEGKRARAPPGIMKILSWNVRGGGNSRALADLKDILRLHHPQVLFLMETKCGVASFEKLRRQLQFDHCFCIPSMGLSGGIGMLWGEGVHINVISSSRNYIDCRVSWDDICFRFSGVYGFPASNDKHLTCALLRRLSPC
Homology
BLAST of Sed0009564 vs. NCBI nr
Match: TXG67121.1 (hypothetical protein EZV62_008396 [Acer yangbiense])

HSP 1 Score: 129.8 bits (325), Expect = 4.9e-26
Identity = 106/366 (28.96%), Postives = 172/366 (46.99%), Query Frame = 0

Query: 12  YEKLPDFCFECGCIGHLTKECPKVIEERLILQ--KYEYGDWMGAPYVKKSGQKTGEEGVG 71
           YE+LP+FC+ C  +GH   EC  V   + +L     ++G W+ A   +K   +   +G G
Sbjct: 60  YERLPEFCYACRRVGHGIMECLDVEARKQVLDGTPTKFGGWLKALIGEKLYSRNNSQGYG 119

Query: 72  QESPKRERTGDRGGRDGRWAEGGRSGGESWRRIMNEEEEDSDKDMNVVKGKIAKAKGGLI 131
               + + T           EG R G             + D  +++    +A  K   +
Sbjct: 120 SFLDRVKST-----------EGSREG-------------EGDGSVSLRPASLASMKVSPV 179

Query: 132 GDTREENSNNRGIVEQGDVGGGLVCLNKEGENIIENSTLSRMCGSGPSKISNDEVGE-KQ 191
                    N G     +  G L+   +EG  +I+++    MC  GP   ++ +VG+ K+
Sbjct: 180 ---------NTGAAPVLEKIGTLIAAEEEG--LIQSNV---MCVDGP---ASKKVGQSKK 239

Query: 192 GKGHEEAVVKCRMRKFRRFKGEHISMNLDLNAIQVDKGKRKLEDMDVVEEVEGKRARAPP 251
            K   ++         ++ +G   SM+  + A QV K K   +  D         +R  P
Sbjct: 240 SKSPFKSKGPVSNLSLKQKEG---SMSQPVFAEQVCKRKMVFDPSD-------SESRGLP 299

Query: 252 GIMKILSWNVRGGGNSRALADLKDILRLHHPQVLFLMETKCGVASFEKLRRQLQFDHCFC 311
             M  LSWNVRG GN  A A L  +L+ H P ++FL ETK   +   +L+  L +   FC
Sbjct: 300 KAMIGLSWNVRGPGNPCAFAALLRLLKCHSPDLVFLSETKLISSKVSRLKLALGYGGWFC 359

Query: 312 IPSMGLSGGIGMLWGEGVHINVISSSRNYIDCRVSW-DDICFRFSGVYGFPASNDKHLTC 371
           + S+G SGG+ + W + + ++V+SSS  +ID RVS  D  C+RFSG YG P ++++  + 
Sbjct: 360 VDSVGSSGGLLLFWKDSISVSVLSSSLGHIDARVSMADGFCWRFSGFYGDPNASNRSSSW 374

Query: 372 ALLRRL 374
           +LL RL
Sbjct: 420 SLLHRL 374

BLAST of Sed0009564 vs. NCBI nr
Match: XP_030486805.1 (uncharacterized protein LOC115703709 [Cannabis sativa])

HSP 1 Score: 115.9 bits (289), Expect = 7.4e-22
Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 0

Query: 251 MKILSWNVRGGGNSRALADLKDILRLHHPQVLFLMETKCGVASFEKLRRQLQFDHCFCIP 310
           M ++SWN RG G+ RA   L+ ++  H P VLF+ME+K  +    K R    F +   +P
Sbjct: 1   MNLISWNARGLGSPRAFRQLRLLISKHLPDVLFIMESKLSIGVISKFRTAFNFPNWIEVP 60

Query: 311 SMGLSGGIGMLWGEGVHINVISSSRNYIDCRVSWDD-ICFRFSGVYGFPASNDKHLTCAL 370
            +GLSGG+ +LW   V+INV++   N++DC ++  D + F FSG YG PA++ +HLT  L
Sbjct: 61  RVGLSGGLMLLWKADVNINVLNFGINFVDCYITASDGLLFHFSGFYGAPATSQRHLTWQL 120

Query: 371 LRRL 374
           L+RL
Sbjct: 121 LKRL 124

BLAST of Sed0009564 vs. NCBI nr
Match: XP_018826186.1 (uncharacterized protein LOC108995141 [Juglans regia] >KAF5471486.1 hypothetical protein F2P56_008274 [Juglans regia])

HSP 1 Score: 115.9 bits (289), Expect = 7.4e-22
Identity = 104/392 (26.53%), Postives = 166/392 (42.35%), Query Frame = 0

Query: 1   MEGNVVLCPILYEKLPDFCFECGCIGHLTKECPKVIEERLILQKYEYGDWMGAPYVKKSG 60
           + GN    P  YEKLP  CF CGC+ H    C                           G
Sbjct: 188 VRGNRFWAPFSYEKLPKICFSCGCMVHGVNGC-------------------------SGG 247

Query: 61  QKTGEEGVG---QESPKRERTGDRGGRDGRWAEGGRSGGESWRRIMNEEEEDSDKDMNVV 120
           Q   EE      +ES K+E    R G     A+ G++G  S        +ED  +     
Sbjct: 248 QGNNEEMEDKWKRESEKKENLETRAG-----AKEGKNGLGS--------DEDEGQTRKKE 307

Query: 121 KGKIAKAKGGLIGDTREENSN--NRGIVEQGDVGGGLVCLNKEGENIIENS------TLS 180
           KG+  +++GG   D  EEN +  + G++ +G+         +E EN+++ +       + 
Sbjct: 308 KGR-EESEGG--KDLEEENGDREDEGMMRRGEERWDKQATEEESENMVDKALEETYGQMV 367

Query: 181 RMCGSGPSKISNDEVGEKQGKGHEEAVVKCRMRKFRRFKGEHISMNLDLNAIQVDKGKRK 240
            +   G   I  ++  +K+G+    A                             KGK+ 
Sbjct: 368 EVSSEGKGGIGVEDHPKKKGEWKRRARA---------------------------KGKQV 427

Query: 241 LEDMDVVEEVEGKRARAPPGIMKILSWNVRGGGNSRALADLKDILRLHHPQVLFLMETKC 300
           + D  +           PP IMKILSWN RG GN R + DL +++  + P ++F+METK 
Sbjct: 428 VSDYPI-----------PPNIMKILSWNCRGLGNPRTVQDLYNMVEKNKPSLVFVMETKS 487

Query: 301 GVASFEKLRRQLQFDHCFCIPSMGLSGGIGMLWGEGVHINVISSSRNYIDCRV------S 360
              SF+ LRR+LQ + CF + ++G  GG+ +LW   V   +++ S+++I+  +       
Sbjct: 488 LKKSFDSLRRRLQCEGCFVVEAVGKGGGLVLLWNSDVRAEIVNYSQSHINVWIEEEGEKK 495

Query: 361 WDDICFRFSGVYGFPASNDKHLTCALLRRLSP 376
           W   CF     YG P +N +  + +LL  L P
Sbjct: 548 WLLTCF-----YGQPDTNKRKESWSLLNSLKP 495

BLAST of Sed0009564 vs. NCBI nr
Match: XP_020412490.1 (uncharacterized protein LOC18793550 [Prunus persica])

HSP 1 Score: 115.9 bits (289), Expect = 7.4e-22
Identity = 52/126 (41.27%), Postives = 81/126 (64.29%), Query Frame = 0

Query: 251 MKILSWNVRGGGNSRALADLKDILRLHHPQVLFLMETKCGVASFEKLRRQLQFDHCFCIP 310
           M +LSWN RG GN R + DL+ ++    P V+FL ET+C   +F  ++ QL FD+CF + 
Sbjct: 1   MSLLSWNCRGLGNPRTVQDLRRLVVAKDPMVVFLCETRCKQRNFNSIKEQLGFDYCFVVD 60

Query: 311 SMGLSGGIGMLWGEGVHINVISSSRNYIDCRVS--WDDICFRFSGVYGFPASNDKHLTCA 370
           ++GLSGG+ + W   +++ + SSS ++ID  V    D + +R +G YG+PA+ D HL+  
Sbjct: 61  AIGLSGGLCLFWKSELNLAIRSSSTHHIDAEVGGIGDSLHWRLTGFYGYPATEDTHLSWN 120

Query: 371 LLRRLS 375
           LLR L+
Sbjct: 121 LLRDLA 126

BLAST of Sed0009564 vs. NCBI nr
Match: VFQ84297.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 115.5 bits (288), Expect = 9.6e-22
Identity = 57/149 (38.26%), Postives = 90/149 (60.40%), Query Frame = 0

Query: 226 GKRKLEDMDVVEEVEGKRARAPPGIMKILSWNVRGGGNSRALADLKDILRLHHPQVLFLM 285
           G+   +D D+   +  KR R PPG M ++SWN RG GN R + ++ ++  +  P+ +FLM
Sbjct: 242 GEGSKQDEDLAFALVTKRKRGPPGAMSLISWNCRGLGNRRTVQEVAELASVKKPEFIFLM 301

Query: 286 ETKCGVASFEKLRRQLQFDHCFCIPSMGLSGGIGMLWGEGVHINVISSSRNYIDCRVSWD 345
           ETKC  +  E+LR +L F+  F + S+GLSGG+ +LW E    N+IS SR ++D  VS  
Sbjct: 302 ETKCARSKAEELRLKLGFEGLFYVDSVGLSGGLALLWKEKNSANLISYSRFHVDIAVSLR 361

Query: 346 DI-CFRFSGVYGFPASNDKHLTCALLRRL 374
           ++  +R +G YG P  + +  +  LL+ L
Sbjct: 362 NLPVWRLTGFYGNPRRDGRQASWDLLQSL 390

BLAST of Sed0009564 vs. ExPASy TrEMBL
Match: A0A5C7ID90 (WD_REPEATS_REGION domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008396 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-26
Identity = 106/366 (28.96%), Postives = 172/366 (46.99%), Query Frame = 0

Query: 12  YEKLPDFCFECGCIGHLTKECPKVIEERLILQ--KYEYGDWMGAPYVKKSGQKTGEEGVG 71
           YE+LP+FC+ C  +GH   EC  V   + +L     ++G W+ A   +K   +   +G G
Sbjct: 60  YERLPEFCYACRRVGHGIMECLDVEARKQVLDGTPTKFGGWLKALIGEKLYSRNNSQGYG 119

Query: 72  QESPKRERTGDRGGRDGRWAEGGRSGGESWRRIMNEEEEDSDKDMNVVKGKIAKAKGGLI 131
               + + T           EG R G             + D  +++    +A  K   +
Sbjct: 120 SFLDRVKST-----------EGSREG-------------EGDGSVSLRPASLASMKVSPV 179

Query: 132 GDTREENSNNRGIVEQGDVGGGLVCLNKEGENIIENSTLSRMCGSGPSKISNDEVGE-KQ 191
                    N G     +  G L+   +EG  +I+++    MC  GP   ++ +VG+ K+
Sbjct: 180 ---------NTGAAPVLEKIGTLIAAEEEG--LIQSNV---MCVDGP---ASKKVGQSKK 239

Query: 192 GKGHEEAVVKCRMRKFRRFKGEHISMNLDLNAIQVDKGKRKLEDMDVVEEVEGKRARAPP 251
            K   ++         ++ +G   SM+  + A QV K K   +  D         +R  P
Sbjct: 240 SKSPFKSKGPVSNLSLKQKEG---SMSQPVFAEQVCKRKMVFDPSD-------SESRGLP 299

Query: 252 GIMKILSWNVRGGGNSRALADLKDILRLHHPQVLFLMETKCGVASFEKLRRQLQFDHCFC 311
             M  LSWNVRG GN  A A L  +L+ H P ++FL ETK   +   +L+  L +   FC
Sbjct: 300 KAMIGLSWNVRGPGNPCAFAALLRLLKCHSPDLVFLSETKLISSKVSRLKLALGYGGWFC 359

Query: 312 IPSMGLSGGIGMLWGEGVHINVISSSRNYIDCRVSW-DDICFRFSGVYGFPASNDKHLTC 371
           + S+G SGG+ + W + + ++V+SSS  +ID RVS  D  C+RFSG YG P ++++  + 
Sbjct: 360 VDSVGSSGGLLLFWKDSISVSVLSSSLGHIDARVSMADGFCWRFSGFYGDPNASNRSSSW 374

Query: 372 ALLRRL 374
           +LL RL
Sbjct: 420 SLLHRL 374

BLAST of Sed0009564 vs. ExPASy TrEMBL
Match: A0A2N9EH45 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1761 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-23
Identity = 114/442 (25.79%), Postives = 186/442 (42.08%), Query Frame = 0

Query: 3   GNVVLCPILYEKLPDFCFECGCIGHLTKECPKVIEERLILQK--YEYGDWM----GAPYV 62
           GN       YE+LP+FC+ CG + H  ++C   +  +  L++   +YG W+    G P+ 
Sbjct: 186 GNETWIAFRYERLPNFCYWCGMLTHGDRDCEWWLRSKGTLRREDQQYGTWLRAEVGKPFR 245

Query: 63  KKSGQKTGEEGVGQESPKRERTGDRGGRDGRWAEGGRSGG-------------------- 122
           +   +  G   +    P+ +R  +          G  +GG                    
Sbjct: 246 RVEVKVAGRSNI----PRWDRRANPMNAGDTPVVGASNGGGGLVNGDGDPSMDFSKLKEN 305

Query: 123 -----ESWRRIMNEEEE------------DSDKDMNVVKGKIAKAKGGLIGDTREEN--- 182
                ES   +++  E+            D+ +   + K  I++ +     D    N   
Sbjct: 306 LPQFQESPNIVVDSSEQIPSMGVSTKFSADNSETAEINKENISQVRDSSQEDFLSTNDPC 365

Query: 183 -------------SNNRGIVEQGDVGGGL-VCLNKEGENIIENSTLSRMCGSGPSKISND 242
                         +N  +V+    G    +CL +      + S        G     + 
Sbjct: 366 VSQILPLEKKLTVDSNEVVVDTASEGANHGICLKEVSRGTEKESLPISSKKKGDGNQYHG 425

Query: 243 EVGEKQGK------GHEEAVVKCRMR----KFRRFKGEHISMNLDLNAIQVDKGKRKLED 302
            VG++  K         + VV+   R    +  R K  H++     +   V +G  KL +
Sbjct: 426 SVGKENIKSTIDLNAMHDVVVQGESRGVWKRLLREKTLHVTPGGPSSLSGVKRG-GKLSE 485

Query: 303 MDVVEEVEGKRARAPPGIMKILSWNVRGGGNSRALADLKDILRLHHPQVLFLMETKCGVA 362
           +D    +  K+ RAPP  M ILSWN RG GN  A+  L ++++   P VLFLMETK    
Sbjct: 486 LDTA--LVQKKGRAPPHPMNILSWNCRGLGNLEAVRVLHNLVKNQGPTVLFLMETKLDSR 545

Query: 363 SFEKLRRQLQFDHCFCIPSMGLSGGIGMLWGEGVHINVISSSRNYIDCRVSWDD-ICFRF 374
             E LR +L+F  CF +PS+G SGG+ +LW +   I V + S+N+ID  V  D+ I +RF
Sbjct: 546 KMEVLRVKLRFKFCFTVPSLGRSGGLALLWNDPAQIIVQNFSQNHIDSHVCLDNGIMWRF 605

BLAST of Sed0009564 vs. ExPASy TrEMBL
Match: A0A2N9ERX7 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5477 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.7e-22
Identity = 108/396 (27.27%), Postives = 176/396 (44.44%), Query Frame = 0

Query: 4   NVVLCPILYEKLPDFCFECGCIGHLTKECPKVIEERLILQK--YEYGDWMGAPYVKKSGQ 63
           N V     YE+LP  CF CG +GHL + C   ++     +    +YG W+ A  V +   
Sbjct: 344 NGVWVAFKYERLPWICFHCGIVGHLERFCRAKLQGGAQGESSFKQYGRWLRATDVGRRRH 403

Query: 64  KTGEEGVGQESPK----RERTGDRGGRDGRWAEGGRSGGESWRRIMNEEEEDSDKDMNVV 123
             G  G+ Q S      R R+   GG    +  G  +G             D+   +++V
Sbjct: 404 AGG--GILQPSESISSTRRRSSAVGGNSSNFECGNGAGLVG----------DNGGSVDMV 463

Query: 124 KGKIAKAKGGLIGDTREENSNNRGIVEQGDV--GGGLVCLNKEGENIIENSTLSRMCGSG 183
           +           G++ E    +  + E G V   GG V     G +    +   +  GSG
Sbjct: 464 R-----------GESHELRKGDEVVGEVGGVRGNGGQVTDEVSGTDTTPRNPEVQHHGSG 523

Query: 184 PSKISNDEVGEKQ----GKGHEEA-----------VVKCRMRKFRRFKGEHISMNLDLNA 243
           PS +    V E Q    G G ++A           + K + +K   +K + +    +  +
Sbjct: 524 PSFLPPGVVIEGQVAATGTGQDDAGSGAMPSKPVVIAKYKKKKPSTWK-KVVRDRRNYAS 583

Query: 244 IQVDKGKRKLEDMDVVEEVEGKRARAPPGIMKILSWNVRGGGNSRALADLKDILRLHHPQ 303
             +   KR LE  + V+ +     R P   M++LSWN RG GN + + +L  +L+   P 
Sbjct: 584 ANLGASKRLLESEETVQAL-----RVP---MRLLSWNCRGLGNPKTVRELLLLLKEQDPS 643

Query: 304 VLFLMETKCGVASFEKLRRQLQFDHCFCIPSMGLSGGIGMLWGEGVHINVISSSRNYIDC 363
           +LFL ET+      E LR + +F + FC+P + + GG+ +LW + V + + S S+N+ID 
Sbjct: 644 ILFLSETRLDCIGVEFLRVKTKFSNAFCVPRLRIGGGLALLWSDKVDVKLASFSKNHIDA 703

Query: 364 RVSWDD--ICFRFSGVYGFPASNDKHLTCALLRRLS 375
            V   D  + FR +  YG P ++ +  T ALL+ LS
Sbjct: 704 DVVVKDTMVVFRVTRFYGNPKTHKRKETWALLKHLS 707

BLAST of Sed0009564 vs. ExPASy TrEMBL
Match: A0A2I4F3F9 (uncharacterized protein LOC108995141 OS=Juglans regia OX=51240 GN=LOC108995141 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.6e-22
Identity = 104/392 (26.53%), Postives = 166/392 (42.35%), Query Frame = 0

Query: 1   MEGNVVLCPILYEKLPDFCFECGCIGHLTKECPKVIEERLILQKYEYGDWMGAPYVKKSG 60
           + GN    P  YEKLP  CF CGC+ H    C                           G
Sbjct: 188 VRGNRFWAPFSYEKLPKICFSCGCMVHGVNGC-------------------------SGG 247

Query: 61  QKTGEEGVG---QESPKRERTGDRGGRDGRWAEGGRSGGESWRRIMNEEEEDSDKDMNVV 120
           Q   EE      +ES K+E    R G     A+ G++G  S        +ED  +     
Sbjct: 248 QGNNEEMEDKWKRESEKKENLETRAG-----AKEGKNGLGS--------DEDEGQTRKKE 307

Query: 121 KGKIAKAKGGLIGDTREENSN--NRGIVEQGDVGGGLVCLNKEGENIIENS------TLS 180
           KG+  +++GG   D  EEN +  + G++ +G+         +E EN+++ +       + 
Sbjct: 308 KGR-EESEGG--KDLEEENGDREDEGMMRRGEERWDKQATEEESENMVDKALEETYGQMV 367

Query: 181 RMCGSGPSKISNDEVGEKQGKGHEEAVVKCRMRKFRRFKGEHISMNLDLNAIQVDKGKRK 240
            +   G   I  ++  +K+G+    A                             KGK+ 
Sbjct: 368 EVSSEGKGGIGVEDHPKKKGEWKRRARA---------------------------KGKQV 427

Query: 241 LEDMDVVEEVEGKRARAPPGIMKILSWNVRGGGNSRALADLKDILRLHHPQVLFLMETKC 300
           + D  +           PP IMKILSWN RG GN R + DL +++  + P ++F+METK 
Sbjct: 428 VSDYPI-----------PPNIMKILSWNCRGLGNPRTVQDLYNMVEKNKPSLVFVMETKS 487

Query: 301 GVASFEKLRRQLQFDHCFCIPSMGLSGGIGMLWGEGVHINVISSSRNYIDCRV------S 360
              SF+ LRR+LQ + CF + ++G  GG+ +LW   V   +++ S+++I+  +       
Sbjct: 488 LKKSFDSLRRRLQCEGCFVVEAVGKGGGLVLLWNSDVRAEIVNYSQSHINVWIEEEGEKK 495

Query: 361 WDDICFRFSGVYGFPASNDKHLTCALLRRLSP 376
           W   CF     YG P +N +  + +LL  L P
Sbjct: 548 WLLTCF-----YGQPDTNKRKESWSLLNSLKP 495

BLAST of Sed0009564 vs. ExPASy TrEMBL
Match: A0A803PLV0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.1e-22
Identity = 106/366 (28.96%), Postives = 154/366 (42.08%), Query Frame = 0

Query: 12  YEKLPDFCFECGCIGHLTKECPKVIEERLILQKYEYGDWMGAPYVKKSGQKTGEEGVGQE 71
           YE+ P FCF CG IGH  K C K+ E+ L      YG++M A +                
Sbjct: 205 YERAPTFCFICGIIGHSEKFCVKLFEKPLDQIVKPYGEFMRAKF---------------- 264

Query: 72  SPKRERTGDRGGRDGRWAEG---GRSGGESWRRIMNEEEEDSDKDMNVVKGKIAKAKGGL 131
             +++  G R  R   W  G   G S G    R  ++   +SD              GG 
Sbjct: 265 QNRKQNIGARWLRTRGWTPGMVAGESSGVGEIRQADDTNMESDNH---------GTDGGE 324

Query: 132 IGDTREENSNNRGIVEQGDVGGGLVCLNKEGENIIENSTLSRMCGSGPSKISNDEVGEKQ 191
           IG   + N ++ G   QG   G L    + G+N           G  P    N+E+ E+ 
Sbjct: 325 IGG--DMNGDSLGFHNQGVHVGDL----QVGQN--------SQYGRNPINGINEEMNERS 384

Query: 192 GKGHEEAVVKCRMRKFRRFKGEHISMNLDLNAIQVDKGKRKLEDMDVVEEVEGKRARAPP 251
            + H++  V                       + +D  +RK       EE+E K A    
Sbjct: 385 AEIHDKGSV-----------------------VIIDNKRRK-----ATEELE-KEASG-- 444

Query: 252 GIMKILSWNVRGGGNSRALADLKDILRLHHPQVLFLMETKCGVASFEKLRRQLQFDHCFC 311
             + +  WN RG GN RA   + +++    P V+FL ET C     E+L   + F+ CF 
Sbjct: 445 --LGLERWNCRGLGNPRAFQFIAELVAQKKPNVIFLCETLCVKERVERLSSLIGFEGCFV 498

Query: 312 IPSMGLSGGIGMLWGEGVHINVISSSRNYIDCRVSWD-DICFRFSGVYGFPASNDKHLTC 371
           +   G SGG+ MLW E   +++ S SRN+ID  V W+ +  FR +G+YG P  N +  T 
Sbjct: 505 VDVHGRSGGVAMLWKEKDEVSINSFSRNHIDAEVLWEGNNRFRLTGIYGEPNRNLRANTW 498

Query: 372 ALLRRL 374
            LLR L
Sbjct: 565 RLLREL 498

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TXG67121.14.9e-2628.96hypothetical protein EZV62_008396 [Acer yangbiense][more]
XP_030486805.17.4e-2241.94uncharacterized protein LOC115703709 [Cannabis sativa][more]
XP_018826186.17.4e-2226.53uncharacterized protein LOC108995141 [Juglans regia] >KAF5471486.1 hypothetical ... [more]
XP_020412490.17.4e-2241.27uncharacterized protein LOC18793550 [Prunus persica][more]
VFQ84297.19.6e-2238.26unnamed protein product [Cuscuta campestris][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7ID902.4e-2628.96WD_REPEATS_REGION domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV... [more]
A0A2N9EH451.1e-2325.79Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9ERX72.7e-2227.27CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5477... [more]
A0A2I4F3F93.6e-2226.53uncharacterized protein LOC108995141 OS=Juglans regia OX=51240 GN=LOC108995141 P... [more]
A0A803PLV06.1e-2228.96Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 7..34
e-value: 2.3E-7
score: 30.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 250..375
e-value: 1.5E-13
score: 53.1
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 248..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..91
NoneNo IPR availablePANTHERPTHR35218:SF2SUBFAMILY NOT NAMEDcoord: 232..343
NoneNo IPR availablePANTHERPTHR35218FAMILY NOT NAMEDcoord: 232..343
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 19..34
score: 9.883478
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 16..36

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0009564.1Sed0009564.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding