Sed0009491 (gene) Chayote v1

Overview


Name	Sed0009491
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box protein
Location	LG05: 43421559 .. 43424327 (+)
RNA-Seq Expression	Sed0009491
Synteny	Sed0009491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGAATATCAATGGTCGATTCTCAAAAGTTCATAGGAGAGAGAGAGCGTCAAGATGGACGCCATGGTTGTTAGGCCCAAGATTCCATGAACATTTTGGATAATTTTTTAGCTCGATCAAGATTCTTGAAATGGCGATGAAATGATGTCAACATCATCTTCTCTCTCTCCTCCGTAGAATCCTCCACTTGCTTTTCTATGGTAATCTCTTCACCCTAAAGCAATCCATTGAGCTCTTGACTTTTTCTCCGCTTCCTTCTGGTTTTTCAACGCCGTCTGAAATCGGTACACGAAAGAGGAGAGGAATGGATTCCGATGATGCTGCTGTGTGGCCGGCGGCGATGGAGTTGGAGCCGGAGCCGGAGATTGACCGCTTGCCGATTGACCTACTCGCTCATATCTTCGCGATGATCCCGTCCTTCACCGATTTGGCTCAGTAATTGATCTTGAATTTTGGTTTTCTTGTTTGATTGCTTTGGTTCCTGATTTTTAGGGTTTTTTTTTTTTTGTGTTAGGGCGTGTGGCGTGTGTAGGAAATGGGAGGAAGGAGTGAAGCTGTCTCTTGGGCGGAGGGAGAAATTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGTGTTATTCACCATGCTTACACTCTTCGAGACCTCGACATGTAAACTTCTTTCGCTCTACCGAATTTTAGTTTTCATCGGATTTTTTGCTTTTCTTTGAGTGCTTTCTGATTACATATGGTTAAGTTTGCTGATGAATTCGTGAGTTGAGTTTTTCGGAATCGCTAGGATGATCAGTTCAATTGGATTTCTGTTTTTTTTTTTTTAGCCCGGCAATTTGATTATTATGATCCACAAAAACAGAGGTTTCTCTTAAGATTGTGTTCATAGAGTGTTTTTTTTTTTGGTAACTGGGAAATCAAAGCTTCTCTTTGCTATGCTCGGGTAACCATATCCATGCTTAGGCTAGGCACTAAGAGACATAGAACGAATGGAGACATGAGAGGTGCCTACAAATTAATGTCACAAGTAGTTTCGAACCTGGGATTGTGAAGGGAGCACACCTTCAAAACCTAAGCCTTGGACCATCCATGCCACCCTTTGGGACAATTTATGATAACCACCTAATTAGTAATTAATTTCCTATTAAGTTTTTTGATATCGAAATATTGTAGGGATAAATGATATGTCTTGAGATAATAGTCGAGTTGCGCGTAGGTAGACCTGGATATTCATGGATATTTGAAAGAAAGAATGAAAGCTTTGTTGGTTATATTGCTCATGTTTTTGGTTGAATTATTCTCAAATAAGAGAACTCCATGAGAGAAACTCAATGGAAAAGAGCTAAAACAGAGTCTCCGTATCAAAAAAACAAAGCTCAGTTGTTGGCCATGGCTGTATCAAAAACTGATTAGTTCATCTTTCTCTTGTAATTTGTGTTTTTTCAGCTCAAGAAGTCGTTGGGGTTGCCAAATAACAGACCATGGATTGTACAAAATCTCTCTTGCAAAGTGTATTCCCAATCTCAGGTCCATTTCGCTATGGGGTATGGCAGGGATCACCGACAAAGGTGTTGTGCAGCTGGTATGATATTATCTCATCTCACACCAAATATGCTTAAAGAAATAGCTTTTATAATCTGGCTCAATGTGTGAAATTGAATTAGTGAATTTCTGTAAGGTCTTTTGTATTTTCATTTCTCCCCACCAATAAGTTTGTGTTGTTTAGTTCTTTTGAATCCTCATGTTCTCAAGAGGCATTTAGAGGGAAATTTTCAGAAACAACATTTTTTCTCTCTCCGTCAGAAATTTTTAAGGTCAAAGTTAATGTGCATGGATTTAGAAGTGGGGTTCTGCTTGTTCTTAATAAAAGTAGAATAAAAAACATGGTAATCTACATATGTTTCACTTTCACTTTTTGTTATAAAATGAAAGAAGATCAGAAGGTTCTTTTTTAAAAGAGAAATATTTGTCTTCTTATAAATGAGGAAGCAAACCCTCGTATATGTGGCATCGATGCCACAATTTTTTTTAATGTTATTGAAAGGAAATTTTTGTGGCACCAAATGATTCTACTTATACATTAAAATAACAACTAAATTGCCTTTTGACAAACCCTTTACATAGTTCATTAACATTTCACTTCCTTTTTCTAAAATTTCATTTGGTTGTATTTCCAGATTTCCCAAGCTAGCTCCTTGCAAAACCTGAATATTGGTGGAACATTTGTCACGGATGTCTCTCTATTTGCAATTGCAGATTACTGTCCAAATTTGAAGGTGATTATTCTAAGAATCTCCTTCACTCTTCCATTACTGAACTTTCATGGAACTCATGAATCATATTGTACCTACAACTTTTAATCAGAGCATATCTCTCTTTAATCTGCAGACGATTGGCCTCTGGAGCTGTCGTCATGTAACAGAGACCGGACTTCTTATCCTCGTAAGTAAATGTCGCAAACTCGAGTCGATAGTTGTGTGGGGAATGAGGGTTCCTGTAGATTGCTTCATTAGTTTGGTTGCAATAAGTCCATCGCTCCAAATAAAATCAAGAAGTATTCTACATTCTATGTGGTCTGTTGTGTGAAATATGTTTCAATATTCGCATCCTGTAAAGCTTCTATCGTATGTTTATTGGTTTGTCATTTCCTCACAATAAATTGCGTATAACACTTAATAGTTCATTTAAAACTAAACTATACACTCTCTTGATGTAAATGTATTTATTCGTTTAATAAATTTCAAGAGATTTGGTCATTAATGTCAATT

mRNA sequence

GATGAATATCAATGGTCGATTCTCAAAAGTTCATAGGAGAGAGAGAGCGTCAAGATGGACGCCATGGTTGTTAGGCCCAAGATTCCATGAACATTTTGGATAATTTTTTAGCTCGATCAAGATTCTTGAAATGGCGATGAAATGATGTCAACATCATCTTCTCTCTCTCCTCCGTAGAATCCTCCACTTGCTTTTCTATGGTAATCTCTTCACCCTAAAGCAATCCATTGAGCTCTTGACTTTTTCTCCGCTTCCTTCTGGTTTTTCAACGCCGTCTGAAATCGGTACACGAAAGAGGAGAGGAATGGATTCCGATGATGCTGCTGTGTGGCCGGCGGCGATGGAGTTGGAGCCGGAGCCGGAGATTGACCGCTTGCCGATTGACCTACTCGCTCATATCTTCGCGATGATCCCGTCCTTCACCGATTTGGCTCAGGCGTGTGGCGTGTGTAGGAAATGGGAGGAAGGAGTGAAGCTGTCTCTTGGGCGGAGGGAGAAATTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGTGTTATTCACCATGCTTACACTCTTCGAGACCTCGACATCTCAAGAAGTCGTTGGGGTTGCCAAATAACAGACCATGGATTGTACAAAATCTCTCTTGCAAAGTGTATTCCCAATCTCAGGTCCATTTCGCTATGGGGTATGGCAGGGATCACCGACAAAGGTGTTGTGCAGCTGATTTCCCAAGCTAGCTCCTTGCAAAACCTGAATATTGGTGGAACATTTGTCACGGATGTCTCTCTATTTGCAATTGCAGATTACTGTCCAAATTTGAAGACGATTGGCCTCTGGAGCTGTCGTCATGTAACAGAGACCGGACTTCTTATCCTCGTAAGTAAATGTCGCAAACTCGAGTCGATAGTTGTGTGGGGAATGAGGGTTCCTGTAGATTGCTTCATTAGTTTGGTTGCAATAAGTCCATCGCTCCAAATAAAATCAAGAAGTATTCTACATTCTATGTGGTCTGTTGTGTGAAATATGTTTCAATATTCGCATCCTGTAAAGCTTCTATCGTATGTTTATTGGTTTGTCATTTCCTCACAATAAATTGCGTATAACACTTAATAGTTCATTTAAAACTAAACTATACACTCTCTTGATGTAAATGTATTTATTCGTTTAATAAATTTCAAGAGATTTGGTCATTAATGTCAATT

Coding sequence (CDS)

ATGGATTCCGATGATGCTGCTGTGTGGCCGGCGGCGATGGAGTTGGAGCCGGAGCCGGAGATTGACCGCTTGCCGATTGACCTACTCGCTCATATCTTCGCGATGATCCCGTCCTTCACCGATTTGGCTCAGGCGTGTGGCGTGTGTAGGAAATGGGAGGAAGGAGTGAAGCTGTCTCTTGGGCGGAGGGAGAAATTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGTGTTATTCACCATGCTTACACTCTTCGAGACCTCGACATCTCAAGAAGTCGTTGGGGTTGCCAAATAACAGACCATGGATTGTACAAAATCTCTCTTGCAAAGTGTATTCCCAATCTCAGGTCCATTTCGCTATGGGGTATGGCAGGGATCACCGACAAAGGTGTTGTGCAGCTGATTTCCCAAGCTAGCTCCTTGCAAAACCTGAATATTGGTGGAACATTTGTCACGGATGTCTCTCTATTTGCAATTGCAGATTACTGTCCAAATTTGAAGACGATTGGCCTCTGGAGCTGTCGTCATGTAACAGAGACCGGACTTCTTATCCTCGTAAGTAAATGTCGCAAACTCGAGTCGATAGTTGTGTGGGGAATGAGGGTTCCTGTAGATTGCTTCATTAGTTTGGTTGCAATAAGTCCATCGCTCCAAATAAAATCAAGAAGTATTCTACATTCTATGTGGTCTGTTGTGTGA

Protein sequence

MDSDDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLGRREKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLRSISLWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRHVTETGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRSILHSMWSVV

Homology

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BLAST of Sed0009491 vs. NCBI nr
Match: XP_038902095.1 (F-box protein At5g67140-like [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 8.8e-114
Identity = 209/235 (88.94%), Postives = 221/235 (94.04%), Query Frame = 0


Query: 4   DDAAVWPAAM--ELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLG 63
           D AAVWP AM  E EPEPEIDRLPIDLLAHIFAMI SFTDLAQACGV RKW+EGVKLSLG
Sbjct: 2   DLAAVWPVAMESESEPEPEIDRLPIDLLAHIFAMITSFTDLAQACGVSRKWKEGVKLSLG 61

Query: 64  RREKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLRS 123
           RR+ LSFAGWKMDD+STAR+I HAY+LR+LDISRSRWGCQITDHGL++ISLAKCIPNLRS
Sbjct: 62  RRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISLAKCIPNLRS 121

Query: 124 ISLWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRHV 183
           ISLWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSLFAIAD CPNLKTI LWSCRHV
Sbjct: 122 ISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHV 181

Query: 184 TETGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRSILHSMWSVV 237
           TETGLLILVSKCRKLESI VWGMRVPVDCFI LVAISPSLQIKSRS+L+SMW VV
Sbjct: 182 TETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSMLNSMWPVV 236

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BLAST of Sed0009491 vs. NCBI nr
Match: KAG7035185.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.5 bits (1077), Expect = 2.0e-113
Identity = 210/237 (88.61%), Postives = 222/237 (93.67%), Query Frame = 0


Query: 1   MDSDDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSL 60
           M S D  +WP  MEL  EPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKW+EGVKLSL
Sbjct: 1   MSSGD--MWPIEMEL--EPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWKEGVKLSL 60

Query: 61  GRREKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLR 120
           GRRE LSFAGWKMDD STAR+IHHAY+LR LDISRSRWGCQITDHGL++ISLAKCIPNL+
Sbjct: 61  GRRESLSFAGWKMDDYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKCIPNLK 120

Query: 121 SISLWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRH 180
           SISLWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSLFAIAD CPNLKTIGLWSCRH
Sbjct: 121 SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGLWSCRH 180

Query: 181 VTETGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRS-ILHSMWSVV 237
           VTETGLLILVSKCRKLESI VWGMRVPVDCFI LVAISPSLQIKSRS +L+SMWSV+
Sbjct: 181 VTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWSVL 233

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BLAST of Sed0009491 vs. NCBI nr
Match: XP_022947259.1 (F-box protein At5g67140 [Cucurbita moschata])

HSP 1 Score: 417.5 bits (1072), Expect = 7.4e-113
Identity = 209/237 (88.19%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MDSDDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSL 60
           M S D  +WP  MEL  EPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKW+EGVKLSL
Sbjct: 1   MSSGD--MWPIEMEL--EPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWKEGVKLSL 60

Query: 61  GRREKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLR 120
           GRRE LSFAGWKMDD STAR+IHHAY+LR LDISRSRWGCQITDHGL++ISLAKCIPNL+
Sbjct: 61  GRRESLSFAGWKMDDYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKCIPNLK 120

Query: 121 SISLWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRH 180
           SISLWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSLFAIAD CPNLKTIGLWSCRH
Sbjct: 121 SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGLWSCRH 180

Query: 181 VTETGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRS-ILHSMWSVV 237
           VTETGLLILVSKCRKLESI VWGMRVPVDCFI LVAISPSLQIKSRS +L+SMW V+
Sbjct: 181 VTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVL 233

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BLAST of Sed0009491 vs. NCBI nr
Match: XP_004149695.1 (F-box protein At5g67140 [Cucumis sativus] >KGN61981.1 hypothetical protein Csa_006050 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 9.7e-113
Identity = 205/233 (87.98%), Postives = 218/233 (93.56%), Query Frame = 0


Query: 4   DDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLGRR 63
           D A VW   MEL  EPEIDRLPIDLLAHIFAMI SFTDLAQACGVCRKW+EGVKLSLGRR
Sbjct: 5   DSAVVWSVEMEL--EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRR 64

Query: 64  EKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLRSIS 123
           + LSFAGWKMDD+STAR+I HAY+LR+LDISRSRWGC ITDHGLY+ISLAKCIPNL+SIS
Sbjct: 65  KSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSIS 124

Query: 124 LWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRHVTE 183
           LWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSL+AIAD CPNLKTI LWSCRHVTE
Sbjct: 125 LWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTE 184

Query: 184 TGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRSILHSMWSVV 237
           TGLLILVSKCRKLESI VWGMRVPVDCFI LVAISPSLQIKSRS+L+SMWSVV
Sbjct: 185 TGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWSVV 235

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BLAST of Sed0009491 vs. NCBI nr
Match: XP_008457759.1 (PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902142.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902143.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >KAA0045774.1 F-box protein [Cucumis melo var. makuwa] >TYJ99508.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 416.8 bits (1070), Expect = 1.3e-112
Identity = 207/236 (87.71%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MDSDDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSL 60
           MDSD   VW   MEL  EPEIDRLPIDLLAHIFAMI SFTDLAQACGVCRKW+EGVKLSL
Sbjct: 1   MDSD--VVWSVEMEL--EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSL 60

Query: 61  GRREKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLR 120
           GRR+ LSFAGWKMDD+STAR+I HAY+LR+LDISRSRWGCQITDHGLY+ISLAKCIPNL+
Sbjct: 61  GRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLK 120

Query: 121 SISLWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRH 180
           SISLWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSL+AIAD CPNLKTI LWSCRH
Sbjct: 121 SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRH 180

Query: 181 VTETGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRSILHSMWSVV 237
           VTETGLLILVSKCRKLESI VWGMRVPVDCFI LVAISPSLQIKSRS+L+SMW VV
Sbjct: 181 VTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPVV 232

[Close]

BLAST of Sed0009491 vs. ExPASy Swiss-Prot
Match: Q9FH99 (F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.3e-85
Identity = 147/215 (68.37%), Postives = 180/215 (83.72%), Query Frame = 0


Query: 15  LEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLGRREKLSFAGWKMD 74
           ++ E  IDRLP+DLLA+IF++  SFT LAQA GVC+KW + V  S+ RRE LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 75  DDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLRSISLWGMAGITDKG 134
           DDST+R++H A+ L++LDISRSRWGC ITD+GLY+I+ A+C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 135 VVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRHVTETGLLILVSKCR 194
           VVQLIS+ SSLQ+LNIGGTF+TD SLFAIA+ C  LKTIG+W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 195 KLESIVVWGMRVPVDCFISLVAISPSLQIKSRSIL 230
           KLESI +WG RVPVDCFI+L+ ISP+LQIK   +L
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELL 215

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BLAST of Sed0009491 vs. ExPASy Swiss-Prot
Match: O49286 (F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13
Identity = 55/203 (27.09%), Postives = 97/203 (47.78%), Query Frame = 0


Query: 24  LPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLGRRE-----------KLSFAGW- 83
           +P++LL  I  ++   T +  +C +C  W + V L L R              LS A   
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRLSLSWCKKNMNSLVLSLAPKF 90

Query: 84  -------------KMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPN 143
                        +++D++   + +H + L+DLD+S+S    +ITDH LY  SLA+   N
Sbjct: 91  VKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCTN 150

Query: 144 LRSISLWGMAGITDKGVVQLISQASSLQNLNIGGTF--VTDVSLFAIADYCPNLKTIGLW 200
           L  ++L G    +D  +  L      L+ LN+ G    V+D +L AI + C  L+++ L 
Sbjct: 151 LTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLG 210

[Close]

BLAST of Sed0009491 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-11
Identity = 35/102 (34.31%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 101 QITDHGLYKISLAKCIPNLRSISLWGMAGITDKGVVQLISQASSLQNLNIGG-TFVTDVS 160
           +++D GL   S+ +  P+L S+SLW ++ ITD G++++    + L+ L +   + +TD  
Sbjct: 163 KVSDLGLR--SIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKG 222

Query: 161 LFAIADYCPNLKTIGLWSCRHVTETGLLILVSKCRKLESIVV 202
           L AIA  CPNL  + L +C  + + GLL +   C KL+S+ +
Sbjct: 223 LVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSI 262

[Close]

BLAST of Sed0009491 vs. ExPASy Swiss-Prot
Match: Q9LPL4 (F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.5e-10
Identity = 38/134 (28.36%), Postives = 74/134 (55.22%), Query Frame = 0


Query: 72  KMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLRSISLWGMAGIT 131
           +++D++   + +H + L++LD+S+S    +ITD  LY  +LA   P+L  ++L G    +
Sbjct: 103 QLEDNAVEAIANHCHELQELDLSKS---LKITDRSLY--ALAHGCPDLTKLNLSGCTSFS 162

Query: 132 DKGVVQLISQASSLQNLNIGGTF--VTDVSLFAIADYCPNLKTIGLWSCRHVTETGLLIL 191
           D  +  L      L+ LN+ G    VTD +L AI + C  ++++ L  C ++++ G++ L
Sbjct: 163 DTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSL 222

Query: 192 VSKCRKLESIVVWG 204
              C  L ++ + G
Sbjct: 223 AYGCPDLRTLDLCG 231

[Close]

BLAST of Sed0009491 vs. ExPASy Swiss-Prot
Match: Q708Y0 (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-09
Identity = 55/206 (26.70%), Postives = 89/206 (43.20%), Query Frame = 0


Query: 16  EPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLGRRE----------- 75
           E +  ID LP + L  I   +PS  + +    V + W   +  S+ R E           
Sbjct: 50  EKQTSIDVLPEECLFEILRRLPSGQERSACACVSKHW-LNLLSSISRSEVNESSVQDVEE 109

Query: 76  -----KLSFAGWKMDDDSTARVIHHAYT---LRDLDISRSRWGCQITDHGLYKISLAKCI 135
                  S  G K  D   A +     +   L  L I  S +  ++TD GL   ++A   
Sbjct: 110 GEGFLSRSLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTDVGLG--AVAHGC 169

Query: 136 PNLRSISLWGMAGITDKGVVQLISQASSLQNLNIGG-TFVTDVSLFAIADYCPNLKTIGL 195
           P+LR +SLW +  ++D G+ ++      ++ L++     +TD  L AIA+ C NL  + +
Sbjct: 170 PSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTI 229

Query: 196 WSCRHVTETGLLILVSKCRKLESIVV 202
            SC  V   GL  +  +C  L SI +
Sbjct: 230 DSCSGVGNEGLRAIARRCVNLRSISI 252

[Close]

BLAST of Sed0009491 vs. ExPASy TrEMBL
Match: A0A6J1G699 (F-box protein At5g67140 OS=Cucurbita moschata OX=3662 GN=LOC111451179 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.6e-113
Identity = 209/237 (88.19%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MDSDDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSL 60
           M S D  +WP  MEL  EPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKW+EGVKLSL
Sbjct: 1   MSSGD--MWPIEMEL--EPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWKEGVKLSL 60

Query: 61  GRREKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLR 120
           GRRE LSFAGWKMDD STAR+IHHAY+LR LDISRSRWGCQITDHGL++ISLAKCIPNL+
Sbjct: 61  GRRESLSFAGWKMDDYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKCIPNLK 120

Query: 121 SISLWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRH 180
           SISLWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSLFAIAD CPNLKTIGLWSCRH
Sbjct: 121 SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGLWSCRH 180

Query: 181 VTETGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRS-ILHSMWSVV 237
           VTETGLLILVSKCRKLESI VWGMRVPVDCFI LVAISPSLQIKSRS +L+SMW V+
Sbjct: 181 VTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVL 233

[Close]

BLAST of Sed0009491 vs. ExPASy TrEMBL
Match: A0A0A0LPU5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.7e-113
Identity = 205/233 (87.98%), Postives = 218/233 (93.56%), Query Frame = 0


Query: 4   DDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLGRR 63
           D A VW   MEL  EPEIDRLPIDLLAHIFAMI SFTDLAQACGVCRKW+EGVKLSLGRR
Sbjct: 5   DSAVVWSVEMEL--EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRR 64

Query: 64  EKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLRSIS 123
           + LSFAGWKMDD+STAR+I HAY+LR+LDISRSRWGC ITDHGLY+ISLAKCIPNL+SIS
Sbjct: 65  KSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSIS 124

Query: 124 LWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRHVTE 183
           LWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSL+AIAD CPNLKTI LWSCRHVTE
Sbjct: 125 LWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTE 184

Query: 184 TGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRSILHSMWSVV 237
           TGLLILVSKCRKLESI VWGMRVPVDCFI LVAISPSLQIKSRS+L+SMWSVV
Sbjct: 185 TGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWSVV 235

[Close]

BLAST of Sed0009491 vs. ExPASy TrEMBL
Match: A0A1S4E1P2 (F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 6.1e-113
Identity = 207/236 (87.71%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MDSDDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSL 60
           MDSD   VW   MEL  EPEIDRLPIDLLAHIFAMI SFTDLAQACGVCRKW+EGVKLSL
Sbjct: 1   MDSD--VVWSVEMEL--EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSL 60

Query: 61  GRREKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLR 120
           GRR+ LSFAGWKMDD+STAR+I HAY+LR+LDISRSRWGCQITDHGLY+ISLAKCIPNL+
Sbjct: 61  GRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLK 120

Query: 121 SISLWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRH 180
           SISLWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSL+AIAD CPNLKTI LWSCRH
Sbjct: 121 SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRH 180

Query: 181 VTETGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRSILHSMWSVV 237
           VTETGLLILVSKCRKLESI VWGMRVPVDCFI LVAISPSLQIKSRS+L+SMW VV
Sbjct: 181 VTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPVV 232

[Close]

BLAST of Sed0009491 vs. ExPASy TrEMBL
Match: A0A5D3BMX7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00750 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 6.1e-113
Identity = 207/236 (87.71%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MDSDDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSL 60
           MDSD   VW   MEL  EPEIDRLPIDLLAHIFAMI SFTDLAQACGVCRKW+EGVKLSL
Sbjct: 1   MDSD--VVWSVEMEL--EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSL 60

Query: 61  GRREKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLR 120
           GRR+ LSFAGWKMDD+STAR+I HAY+LR+LDISRSRWGCQITDHGLY+ISLAKCIPNL+
Sbjct: 61  GRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLK 120

Query: 121 SISLWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRH 180
           SISLWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSL+AIAD CPNLKTI LWSCRH
Sbjct: 121 SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRH 180

Query: 181 VTETGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRSILHSMWSVV 237
           VTETGLLILVSKCRKLESI VWGMRVPVDCFI LVAISPSLQIKSRS+L+SMW VV
Sbjct: 181 VTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPVV 232

[Close]

BLAST of Sed0009491 vs. ExPASy TrEMBL
Match: A0A6J1KZ61 (F-box protein At5g67140 OS=Cucurbita maxima OX=3661 GN=LOC111499581 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.6e-111
Identity = 207/237 (87.34%), Postives = 219/237 (92.41%), Query Frame = 0


Query: 1   MDSDDAAVWPAAMELEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSL 60
           M S D  +WP  MEL  E EIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKW+EGVKLSL
Sbjct: 1   MSSGD--MWPIEMEL--EAEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWKEGVKLSL 60

Query: 61  GRREKLSFAGWKMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLR 120
           GRRE LSFAGWKMDD STAR+IHHAY+LR LDISRSRWGCQITDHGL++ISLAKCIPNL+
Sbjct: 61  GRRESLSFAGWKMDDYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKCIPNLK 120

Query: 121 SISLWGMAGITDKGVVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRH 180
           SISLWGMAGITDKGVVQLIS+A+SLQNLNIGGTFVTDVSLFAIAD CPNLKTIGLWSCRH
Sbjct: 121 SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGLWSCRH 180

Query: 181 VTETGLLILVSKCRKLESIVVWGMRVPVDCFISLVAISPSLQIKSRS-ILHSMWSVV 237
           VTETGLLILVSKC KLESI VWGMRVPVDCFI LVAISPSLQIKSRS +L+SMW V+
Sbjct: 181 VTETGLLILVSKCCKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVL 233

[Close]

BLAST of Sed0009491 vs. TAIR 10
Match: AT5G67140.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 316.6 bits (810), Expect = 1.7e-86
Identity = 147/215 (68.37%), Postives = 180/215 (83.72%), Query Frame = 0


Query: 15  LEPEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLGRREKLSFAGWKMD 74
           ++ E  IDRLP+DLLA+IF++  SFT LAQA GVC+KW + V  S+ RRE LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 75  DDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPNLRSISLWGMAGITDKG 134
           DDST+R++H A+ L++LDISRSRWGC ITD+GLY+I+ A+C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 135 VVQLISQASSLQNLNIGGTFVTDVSLFAIADYCPNLKTIGLWSCRHVTETGLLILVSKCR 194
           VVQLIS+ SSLQ+LNIGGTF+TD SLFAIA+ C  LKTIG+W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 195 KLESIVVWGMRVPVDCFISLVAISPSLQIKSRSIL 230
           KLESI +WG RVPVDCFI+L+ ISP+LQIK   +L
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELL 215

[Close]

BLAST of Sed0009491 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14
Identity = 55/203 (27.09%), Postives = 97/203 (47.78%), Query Frame = 0


Query: 24  LPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLGRRE-----------KLSFAGW- 83
           +P++LL  I  ++   T +  +C +C  W + V L L R              LS A   
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRLSLSWCKKNMNSLVLSLAPKF 90

Query: 84  -------------KMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPN 143
                        +++D++   + +H + L+DLD+S+S    +ITDH LY  SLA+   N
Sbjct: 91  VKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCTN 150

Query: 144 LRSISLWGMAGITDKGVVQLISQASSLQNLNIGGTF--VTDVSLFAIADYCPNLKTIGLW 200
           L  ++L G    +D  +  L      L+ LN+ G    V+D +L AI + C  L+++ L 
Sbjct: 151 LTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLG 210

[Close]

BLAST of Sed0009491 vs. TAIR 10
Match: AT1G77000.2 (RNI-like superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14
Identity = 55/203 (27.09%), Postives = 97/203 (47.78%), Query Frame = 0


Query: 24  LPIDLLAHIFAMIPSFTDLAQACGVCRKWEEGVKLSLGRRE-----------KLSFAGW- 83
           +P++LL  I  ++   T +  +C +C  W + V L L R              LS A   
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRLSLSWCKKNMNSLVLSLAPKF 90

Query: 84  -------------KMDDDSTARVIHHAYTLRDLDISRSRWGCQITDHGLYKISLAKCIPN 143
                        +++D++   + +H + L+DLD+S+S    +ITDH LY  SLA+   N
Sbjct: 91  VKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCTN 150

Query: 144 LRSISLWGMAGITDKGVVQLISQASSLQNLNIGGTF--VTDVSLFAIADYCPNLKTIGLW 200
           L  ++L G    +D  +  L      L+ LN+ G    V+D +L AI + C  L+++ L 
Sbjct: 151 LTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLG 210

[Close]

BLAST of Sed0009491 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-12
Identity = 35/102 (34.31%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 101 QITDHGLYKISLAKCIPNLRSISLWGMAGITDKGVVQLISQASSLQNLNIGG-TFVTDVS 160
           +++D GL   S+ +  P+L S+SLW ++ ITD G++++    + L+ L +   + +TD  
Sbjct: 163 KVSDLGLR--SIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKG 222

Query: 161 LFAIADYCPNLKTIGLWSCRHVTETGLLILVSKCRKLESIVV 202
           L AIA  CPNL  + L +C  + + GLL +   C KL+S+ +
Sbjct: 223 LVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSI 262

[Close]

BLAST of Sed0009491 vs. TAIR 10
Match: AT5G23340.1 (RNI-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11
Identity = 46/156 (29.49%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 76  DSTARVIHHAYT-LRDLDISRSRWGCQITDHGLYKISLAKCIPNLRSISLWGMAGITDKG 135
           DS   VI   +  LR L++   +    ITD GL   S+ +C+  L+ + +     ++DKG
Sbjct: 87  DSDLAVISEGFKFLRVLNLHNCK---GITDTGL--ASIGRCLSLLQFLDVSYCRKLSDKG 146

Query: 136 VVQLISQASSLQNLNIGG-TFVTDVSLFAIADYCPNLKTIGLWSCRHVTETGLLILVSKC 195
           +  +      L+ L++ G  F+TD SL ++++ C +L+ +GL  C ++T++GL  LV  C
Sbjct: 147 LSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGC 206

Query: 196 RKLESIVVWGMRVPVDCFISLVAISPSLQIKSRSIL 230
           RK++S+ +       D  +S VA + +  +K+  +L
Sbjct: 207 RKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLL 237

The following BLAST results are available for this feature:

BLAST of Sed0009491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902095.1	8.8e-114	88.94	F-box protein At5g67140-like [Benincasa hispida]	[more]
KAG7035185.1	2.0e-113	88.61	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022947259.1	7.4e-113	88.19	F-box protein At5g67140 [Cucurbita moschata]	[more]
XP_004149695.1	9.7e-113	87.98	F-box protein At5g67140 [Cucumis sativus] >KGN61981.1 hypothetical protein Csa_0...	[more]
XP_008457759.1	1.3e-112	87.71	PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-b...	[more]

BLAST of Sed0009491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH99	2.3e-85	68.37	F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1	[more]
O49286	1.4e-13	27.09	F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1	[more]
Q9SKK0	5.0e-11	34.31	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]
Q9LPL4	5.5e-10	28.36	F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1	[more]
Q708Y0	2.1e-09	26.70	EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1	[more]

BLAST of Sed0009491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G699	3.6e-113	88.19	F-box protein At5g67140 OS=Cucurbita moschata OX=3662 GN=LOC111451179 PE=4 SV=1	[more]
A0A0A0LPU5	4.7e-113	87.98	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 ...	[more]
A0A1S4E1P2	6.1e-113	87.71	F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1	[more]
A0A5D3BMX7	6.1e-113	87.71	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00750 ...	[more]
A0A6J1KZ61	2.6e-111	87.34	F-box protein At5g67140 OS=Cucurbita maxima OX=3661 GN=LOC111499581 PE=4 SV=1	[more]

BLAST of Sed0009491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67140.1	1.7e-86	68.37	F-box/RNI-like superfamily protein	[more]
AT1G77000.1	1.0e-14	27.09	RNI-like superfamily protein	[more]
AT1G77000.2	1.0e-14	27.09	RNI-like superfamily protein	[more]
AT2G25490.1	3.5e-12	34.31	EIN3-binding F box protein 1	[more]
AT5G23340.1	5.1e-11	29.49	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 116..141 e-value: 11.0 score: 14.2 coord: 167..192 e-value: 1.6E-4 score: 31.0 coord: 142..166 e-value: 10.0 score: 14.6
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 154..235 e-value: 2.3E-12 score: 48.5
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 57..153 e-value: 2.9E-10 score: 41.7
None	No IPR available	GENE3D	1.20.1280.50		coord: 22..56 e-value: 1.1E-5 score: 27.2
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 13..225
None	No IPR available	PANTHER	PTHR16134:SF117	SUBFAMILY NOT NAMED	coord: 13..225
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 79..221
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 21..53 e-value: 3.3E-6 score: 26.9
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 13..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009491.1	Sed0009491.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding