Sed0009484 (gene) Chayote v1

Overview


Name	Sed0009484
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR24-like
Location	LG01: 1852978 .. 1853389 (-)
RNA-Seq Expression	Sed0009484
Synteny	Sed0009484

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTACAAATTTCTCTTAAATTGGCTCTACACCAATTGAACAAACAAGCTTAATCATGGGAATTCATTTGCCATTCCGGATTCTTTGTAATGTGCCGTCAGATTTCACCAAAAACCAGTTATATGTTCCTAAAGGTCATGTCGCAGTTTATGTGGGAGAGATACAAAAGAAGCGGTTCGTGGTTCCGATATCATACTTGAATCATCCTTCATTCCAACAGCTACTTAAATACGCCGAGGAGGAGTTTGGTTTCCGACATCCTCAAGGGGGTCTAACGATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACTTCTAGGTTGCAAGTTTCTTGTGAACTAATACTAAAATGATCTATGATATGAATGAATGTCATTATGCTGAGATCTTAACTAATATATGATTAATATAAAT

mRNA sequence

TTTACAAATTTCTCTTAAATTGGCTCTACACCAATTGAACAAACAAGCTTAATCATGGGAATTCATTTGCCATTCCGGATTCTTTGTAATGTGCCGTCAGATTTCACCAAAAACCAGTTATATGTTCCTAAAGGTCATGTCGCAGTTTATGTGGGAGAGATACAAAAGAAGCGGTTCGTGGTTCCGATATCATACTTGAATCATCCTTCATTCCAACAGCTACTTAAATACGCCGAGGAGGAGTTTGGTTTCCGACATCCTCAAGGGGGTCTAACGATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACTTCTAGGTTGCAAGTTTCTTGTGAACTAATACTAAAATGATCTATGATATGAATGAATGTCATTATGCTGAGATCTTAACTAATATATGATTAATATAAAT

Coding sequence (CDS)

ATGGGAATTCATTTGCCATTCCGGATTCTTTGTAATGTGCCGTCAGATTTCACCAAAAACCAGTTATATGTTCCTAAAGGTCATGTCGCAGTTTATGTGGGAGAGATACAAAAGAAGCGGTTCGTGGTTCCGATATCATACTTGAATCATCCTTCATTCCAACAGCTACTTAAATACGCCGAGGAGGAGTTTGGTTTCCGACATCCTCAAGGGGGTCTAACGATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACTTCTAGGTTGCAAGTTTCTTGTGAACTAATACTAAAATGA

Protein sequence

MGIHLPFRILCNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIPCKEDAFIDLTSRLQVSCELILK

Homology

[Close]

BLAST of Sed0009484 vs. NCBI nr
Match: KGN61881.1 (hypothetical protein Csa_006261 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 8.6e-39
Identity = 83/97 (85.57%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MGIHLPFRIL-----CNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQ 60
          MGI+LPFRIL       VPS FTKNQL VPKGHV VYVGE+QKKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIYLPFRILFVKQILKVPSGFTKNQLSVPKGHVVVYVGEMQKKRFVVPISYLNHPSFQQ 60

Query: 61 LLKYAEEEFGFRHPQGGLTIPCKEDAFIDLTSRLQVS 93
          LLKYAEEEFGF+HPQGGLTIPCKED FIDLTSRLQVS
Sbjct: 61 LLKYAEEEFGFQHPQGGLTIPCKEDTFIDLTSRLQVS 97

[Close]

BLAST of Sed0009484 vs. NCBI nr
Match: XP_038901155.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 169.1 bits (427), Expect = 1.9e-38
Identity = 81/96 (84.38%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 1  MGIHLPFRI-----LCNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQ 60
          MGI LPFR      +  VPS FTKNQLYVPKGHV VYVGE+QKKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIFLPFRFIFAKQILKVPSGFTKNQLYVPKGHVVVYVGEMQKKRFVVPISYLNHPSFQQ 60

Query: 61 LLKYAEEEFGFRHPQGGLTIPCKEDAFIDLTSRLQV 92
          LLKYAEEEFGF+HPQGGLTIPCKEDAFIDLTSRLQ+
Sbjct: 61 LLKYAEEEFGFQHPQGGLTIPCKEDAFIDLTSRLQL 96

[Close]

BLAST of Sed0009484 vs. NCBI nr
Match: XP_008457636.1 (PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 2.5e-38
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MGIHLPFRIL-----CNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQ 60
          MGI+LPF+IL       VPS FTKNQL VPKGHV VYVGE+QKKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIYLPFKILFVKQILKVPSGFTKNQLSVPKGHVVVYVGEMQKKRFVVPISYLNHPSFQQ 60

Query: 61 LLKYAEEEFGFRHPQGGLTIPCKEDAFIDLTSRLQVS 93
          LLKYAEEEFGF+HPQGGLTIPCKED F+DLTSRLQVS
Sbjct: 61 LLKYAEEEFGFQHPQGGLTIPCKEDTFVDLTSRLQVS 97

[Close]

BLAST of Sed0009484 vs. NCBI nr
Match: KAG6605016.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.4 bits (394), Expect = 1.3e-34
Identity = 80/96 (83.33%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 1  MGIHLPFRIL-----CNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQ 60
          MGI  PF+IL       +PS FTKNQ YVPKGHVAVYVGE Q+KRFVVPISYLNHPSFQQ
Sbjct: 1  MGI-FPFQILFVKQILKMPSGFTKNQ-YVPKGHVAVYVGERQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLKYAEEEFGFRHPQGGLTIPCKEDAFIDLTSRLQV 92
          LLKYAEEEFGF+HPQGGLTIPCKEDAFIDLTSRLQV
Sbjct: 61 LLKYAEEEFGFQHPQGGLTIPCKEDAFIDLTSRLQV 94

[Close]

BLAST of Sed0009484 vs. NCBI nr
Match: XP_023007096.1 (auxin-responsive protein SAUR24-like [Cucurbita maxima])

HSP 1 Score: 154.8 bits (390), Expect = 3.7e-34
Identity = 79/96 (82.29%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 1  MGIHLPFRIL-----CNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQ 60
          MGI  PF+IL       +PS FTKNQ YVPKGHVAVYVGE Q+KRFVVPISYLNHPSF+Q
Sbjct: 1  MGI-FPFQILFVKQILKMPSGFTKNQ-YVPKGHVAVYVGERQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLKYAEEEFGFRHPQGGLTIPCKEDAFIDLTSRLQV 92
          LLKYAEEEFGF+HPQGGLTIPCKEDAFIDLTSRLQV
Sbjct: 61 LLKYAEEEFGFQHPQGGLTIPCKEDAFIDLTSRLQV 94

[Close]

BLAST of Sed0009484 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.0e-23
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 25 PKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIPCKEDAFID 84
          PKG +AVYVGE QKKR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 85 LTSRLQ 91
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Sed0009484 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.0e-23
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 25 PKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIPCKEDAFID 84
          PKG +AVYVGE QKKR++VPISYLN PSFQ LL  +EEEFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 85 LTSRLQ 91
          +TSR Q
Sbjct: 85 VTSRFQ 90

[Close]

BLAST of Sed0009484 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 25 PKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIPCKEDAFID 84
          PKG +AVYVGE QKKR++VP+SYLN PSFQ LL  +E+EFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 85 LTSRLQ 91
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Sed0009484 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 25 PKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIPCKEDAFID 84
          PKG +AVYVGE QKKR++VP+SYL+ PSFQ LL  +EEEFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMGGLTIPCPEDTFIN 84

Query: 85 LTSRLQ 91
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Sed0009484 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 25 PKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIPCKEDAFID 84
          PKG +AVYVGE QKKR++VP+SYL+ PSFQ LL  +EEEFGF HP GGLTIPC ED FI+
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 85 LTSRLQ 91
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Sed0009484 vs. ExPASy TrEMBL
Match: A0A0A0LPI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258770 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.2e-39
Identity = 83/97 (85.57%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MGIHLPFRIL-----CNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQ 60
          MGI+LPFRIL       VPS FTKNQL VPKGHV VYVGE+QKKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIYLPFRILFVKQILKVPSGFTKNQLSVPKGHVVVYVGEMQKKRFVVPISYLNHPSFQQ 60

Query: 61 LLKYAEEEFGFRHPQGGLTIPCKEDAFIDLTSRLQVS 93
          LLKYAEEEFGF+HPQGGLTIPCKED FIDLTSRLQVS
Sbjct: 61 LLKYAEEEFGFQHPQGGLTIPCKEDTFIDLTSRLQVS 97

[Close]

BLAST of Sed0009484 vs. ExPASy TrEMBL
Match: A0A1S3C6L9 (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497284 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MGIHLPFRIL-----CNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQ 60
          MGI+LPF+IL       VPS FTKNQL VPKGHV VYVGE+QKKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIYLPFKILFVKQILKVPSGFTKNQLSVPKGHVVVYVGEMQKKRFVVPISYLNHPSFQQ 60

Query: 61 LLKYAEEEFGFRHPQGGLTIPCKEDAFIDLTSRLQVS 93
          LLKYAEEEFGF+HPQGGLTIPCKED F+DLTSRLQVS
Sbjct: 61 LLKYAEEEFGFQHPQGGLTIPCKEDTFVDLTSRLQVS 97

[Close]

BLAST of Sed0009484 vs. ExPASy TrEMBL
Match: A0A6J1KZK1 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499693 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34
Identity = 79/96 (82.29%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 1  MGIHLPFRIL-----CNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQ 60
          MGI  PF+IL       +PS FTKNQ YVPKGHVAVYVGE Q+KRFVVPISYLNHPSF+Q
Sbjct: 1  MGI-FPFQILFVKQILKMPSGFTKNQ-YVPKGHVAVYVGERQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLKYAEEEFGFRHPQGGLTIPCKEDAFIDLTSRLQV 92
          LLKYAEEEFGF+HPQGGLTIPCKEDAFIDLTSRLQV
Sbjct: 61 LLKYAEEEFGFQHPQGGLTIPCKEDAFIDLTSRLQV 94

[Close]

BLAST of Sed0009484 vs. ExPASy TrEMBL
Match: A0A5D3BKE3 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001800 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.0e-34
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 10 LCNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHP 69
          L  + S FTKNQL VPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLL YAEEEFGF HP
Sbjct: 15 LLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHP 74

Query: 70 QGGLTIPCKEDAFIDLTSRLQVS 93
          QGGLTIPCKED F+DLTSRLQVS
Sbjct: 75 QGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Sed0009484 vs. ExPASy TrEMBL
Match: A0A1S3C5X3 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497283 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.0e-34
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 10 LCNVPSDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHP 69
          L  + S FTKNQL VPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLL YAEEEFGF HP
Sbjct: 15 LLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHP 74

Query: 70 QGGLTIPCKEDAFIDLTSRLQVS 93
          QGGLTIPCKED F+DLTSRLQVS
Sbjct: 75 QGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Sed0009484 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25
Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 18 TKNQLYVPKGHVAVYVGE-IQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIP 77
          + N + +PKGH+AVYVGE +QK+RFVVP++YL+HP FQ+LL+ AEEEFGF HP GGLTIP
Sbjct: 22 SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHPMGGLTIP 81

Query: 78 CKEDAFIDLTSRLQVS 93
          C E  FIDL SRL  S
Sbjct: 82 CTEQIFIDLASRLSTS 97

[Close]

BLAST of Sed0009484 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 23  YVPKGHVAVYVG---EIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIPCKE 82
           +VPKGHVAVYVG   E++KKRFVVPIS+LNHPSF++ L  AEEEFGF HP GGLTIPC+E
Sbjct: 34  HVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCRE 93

Query: 83  DAFIDL-TSRLQ 91
           + F+DL  SRLQ
Sbjct: 94  EVFLDLIASRLQ 105

[Close]

BLAST of Sed0009484 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 2.9e-24
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 25 PKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIPCKEDAFID 84
          PKG +AVYVGE QKKR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 85 LTSRLQ 91
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Sed0009484 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 3.7e-24
Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 15 SDFTKNQLYVPKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLT 74
          S  + + L VPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL+ AEEEFGF HP GGLT
Sbjct: 24 SSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLT 83

Query: 75 IPCKEDAFIDLTSR 89
          IPC E+ FIDL SR
Sbjct: 84 IPCSEEIFIDLASR 97

[Close]

BLAST of Sed0009484 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 6.4e-24
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 25 PKGHVAVYVGEIQKKRFVVPISYLNHPSFQQLLKYAEEEFGFRHPQGGLTIPCKEDAFID 84
          PKG +AVYVGE QKKR++VPISYLN PSFQ LL  +EEEFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 85 LTSRLQ 91
          +TSR Q
Sbjct: 85 VTSRFQ 90

The following BLAST results are available for this feature:

BLAST of Sed0009484 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61881.1	8.6e-39	85.57	hypothetical protein Csa_006261 [Cucumis sativus]	[more]
XP_038901155.1	1.9e-38	84.38	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_008457636.1	2.5e-38	83.51	PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]	[more]
KAG6605016.1	1.3e-34	83.33	Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023007096.1	3.7e-34	82.29	auxin-responsive protein SAUR24-like [Cucurbita maxima]	[more]

BLAST of Sed0009484 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	4.0e-23	74.24	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	9.0e-23	74.24	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	1.2e-22	72.73	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	1.5e-22	72.73	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF9	2.0e-22	72.73	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of Sed0009484 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI5	4.2e-39	85.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258770 PE=3 SV=1	[more]
A0A1S3C6L9	1.2e-38	83.51	auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497284 PE=...	[more]
A0A6J1KZK1	1.8e-34	82.29	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499693...	[more]
A0A5D3BKE3	9.0e-34	86.75	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C5X3	9.0e-34	86.75	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497283 PE=...	[more]

BLAST of Sed0009484 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	2.0e-25	67.11	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.3e-24	72.22	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.9e-24	74.24	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	3.7e-24	67.57	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	6.4e-24	74.24	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 19..88 e-value: 1.6E-25 score: 89.1
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 15..89
None	No IPR available	PANTHER	PTHR31929:SF38	SMALL AUXIN-UP RNA-RELATED	coord: 15..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009484.1	Sed0009484.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin