Sed0009468 (gene) Chayote v1

Overview


Name	Sed0009468
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transcription initiation factor TFIID subunit 8
Location	LG04: 28077769 .. 28078749 (-)
RNA-Seq Expression	Sed0009468
Synteny	Sed0009468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGATGAGGGTGGAAATAACGACATGGAGTGGAAGGAACCACAGTGTTCTGAGTTCGGGCGAGCGGTGTCGAGGATTGCTGTGGCGCAGATGGGTAAAAGCGCAGGGTTTCAGAGCTTTAAGGAGTCTGCTCTAGACGCCTTGGCCGACATTGCCATCAAATACCTTGGCCATTTGGGTAAGATATCATCCTTCTATGCTGATTTTGCTGGTAGAACTGAGTGCAATGTGTTTGATATCATTAGAGGCCTTGAGGAGTTGGAGGAATCATCATCACAGGGCTTTCAGGCTGCTTGGCAACCAAATCATTGTCTTGCTACTTCAGGCTCTGTCAAGAACATTGTTCGCTATGTGAATTCGGCTGAAGAGATCCCTTTTGCTCACCCGTTACCACCTTTCCCTGTGATTCCAAACAGGAAGCCTATCCCAAGCTTTGCTCAGATGGGTGAAACCCCACCTCCCAAACATGTCCCCAATTGGTTACCCGCATTCCCTGATGCTCACACTTACAACCATTCAGCTGCTTTGTGGAGGAAGACTCCGAGAGAGCCCCGCGTCGAGAAGATGGGGAAGTCGTTGCTGGGCTTGCAGCAGAGATTGGTTTCCTGTGGTTCAACAAGAAGTGGCAATGGAGGTGAGAGTAATTCATTCTTTGGGTCATGTCTGCAAGAGATGGATGGGATGAGCCATTTGTCTGCGCCAGAGGTGTTTGCTCCTGCCATTGATGTGATTCAAAGTGGTGGGTTAGCTAATAGTGAGGACGATAGTACAAAGATTCTTCCTATTAAGAGGCCTCTTGTTCAATTCAAGTTGAAAACTAGCAGAACTTTTCTTGGAGCAACTGTGAAGTTAAATCCTAAAATGGCAGGAATGAAGGAATCCATGTTCTGGGTTCGACGAGATGACGAAAGAGATCTCGATCAAAAGCGAGATGATGACAGAGATCAAAAGAAGAGGAGAATTGAAAACATTCTATAG

mRNA sequence

ATGAGCGATGAGGGTGGAAATAACGACATGGAGTGGAAGGAACCACAGTGTTCTGAGTTCGGGCGAGCGGTGTCGAGGATTGCTGTGGCGCAGATGGGTAAAAGCGCAGGGTTTCAGAGCTTTAAGGAGTCTGCTCTAGACGCCTTGGCCGACATTGCCATCAAATACCTTGGCCATTTGGGTAAGATATCATCCTTCTATGCTGATTTTGCTGGTAGAACTGAGTGCAATGTGTTTGATATCATTAGAGGCCTTGAGGAGTTGGAGGAATCATCATCACAGGGCTTTCAGGCTGCTTGGCAACCAAATCATTGTCTTGCTACTTCAGGCTCTGTCAAGAACATTGTTCGCTATGTGAATTCGGCTGAAGAGATCCCTTTTGCTCACCCGTTACCACCTTTCCCTGTGATTCCAAACAGGAAGCCTATCCCAAGCTTTGCTCAGATGGGTGAAACCCCACCTCCCAAACATGTCCCCAATTGGTTACCCGCATTCCCTGATGCTCACACTTACAACCATTCAGCTGCTTTGTGGAGGAAGACTCCGAGAGAGCCCCGCGTCGAGAAGATGGGGAAGTCGTTGCTGGGCTTGCAGCAGAGATTGGTTTCCTGTGGTTCAACAAGAAGTGGCAATGGAGGTGAGAGTAATTCATTCTTTGGGTCATGTCTGCAAGAGATGGATGGGATGAGCCATTTGTCTGCGCCAGAGGTGTTTGCTCCTGCCATTGATGTGATTCAAAGTGGTGGGTTAGCTAATAGTGAGGACGATAGTACAAAGATTCTTCCTATTAAGAGGCCTCTTGTTCAATTCAAGTTGAAAACTAGCAGAACTTTTCTTGGAGCAACTGTGAAGTTAAATCCTAAAATGGCAGGAATGAAGGAATCCATGTTCTGGGTTCGACGAGATGACGAAAGAGATCTCGATCAAAAGCGAGATGATGACAGAGATCAAAAGAAGAGGAGAATTGAAAACATTCTATAG

Coding sequence (CDS)

ATGAGCGATGAGGGTGGAAATAACGACATGGAGTGGAAGGAACCACAGTGTTCTGAGTTCGGGCGAGCGGTGTCGAGGATTGCTGTGGCGCAGATGGGTAAAAGCGCAGGGTTTCAGAGCTTTAAGGAGTCTGCTCTAGACGCCTTGGCCGACATTGCCATCAAATACCTTGGCCATTTGGGTAAGATATCATCCTTCTATGCTGATTTTGCTGGTAGAACTGAGTGCAATGTGTTTGATATCATTAGAGGCCTTGAGGAGTTGGAGGAATCATCATCACAGGGCTTTCAGGCTGCTTGGCAACCAAATCATTGTCTTGCTACTTCAGGCTCTGTCAAGAACATTGTTCGCTATGTGAATTCGGCTGAAGAGATCCCTTTTGCTCACCCGTTACCACCTTTCCCTGTGATTCCAAACAGGAAGCCTATCCCAAGCTTTGCTCAGATGGGTGAAACCCCACCTCCCAAACATGTCCCCAATTGGTTACCCGCATTCCCTGATGCTCACACTTACAACCATTCAGCTGCTTTGTGGAGGAAGACTCCGAGAGAGCCCCGCGTCGAGAAGATGGGGAAGTCGTTGCTGGGCTTGCAGCAGAGATTGGTTTCCTGTGGTTCAACAAGAAGTGGCAATGGAGGTGAGAGTAATTCATTCTTTGGGTCATGTCTGCAAGAGATGGATGGGATGAGCCATTTGTCTGCGCCAGAGGTGTTTGCTCCTGCCATTGATGTGATTCAAAGTGGTGGGTTAGCTAATAGTGAGGACGATAGTACAAAGATTCTTCCTATTAAGAGGCCTCTTGTTCAATTCAAGTTGAAAACTAGCAGAACTTTTCTTGGAGCAACTGTGAAGTTAAATCCTAAAATGGCAGGAATGAAGGAATCCATGTTCTGGGTTCGACGAGATGACGAAAGAGATCTCGATCAAAAGCGAGATGATGACAGAGATCAAAAGAAGAGGAGAATTGAAAACATTCTATAG

Protein sequence

MSDEGGNNDMEWKEPQCSEFGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIKYLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNIVRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSAALWRKTPREPRVEKMGKSLLGLQQRLVSCGSTRSGNGGESNSFFGSCLQEMDGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRPLVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL

Homology

[Close]

BLAST of Sed0009468 vs. NCBI nr
Match: KAG7017372.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 443.4 bits (1139), Expect = 1.8e-120
Identity = 239/360 (66.39%), Postives = 271/360 (75.28%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCSE--------FGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +GG + M+ KE Q SE        FGR VSRIAV QM   AGFQSFKESA DALADIAIK
Sbjct: 3   DGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL HLG+I++FYA+ AGRTECNVFDIIRG+EELE  SSQGFQ AW+PNHCL  SGSVK+I
Sbjct: 63  YLCHLGRIAAFYANLAGRTECNVFDIIRGIEELE--SSQGFQGAWEPNHCLTNSGSVKSI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           VRYVNS +EIPFAHPLP FPVI NR+PIPSF Q+GE PP KH+P+WLPAFPDAHTYNHS 
Sbjct: 123 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ PREPR EK+          KSLLGLQ+RLVSCGS RSGN      GGESNSF G
Sbjct: 183 ALWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           SCLQEM              DG+SHLS PEVFAPAI+ I+  G  NS DD   ILP  RP
Sbjct: 243 SCLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEAIKGRGFPNSRDDEANILPCARP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+TSRTFLG ++ LN K+ G++ES+FWVRRDDER  DQK + +RD+KKRR+E IL
Sbjct: 303 LVHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDER--DQKHNKERDEKKRRVEYIL 357

[Close]

BLAST of Sed0009468 vs. NCBI nr
Match: XP_022934759.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita moschata])

HSP 1 Score: 441.8 bits (1135), Expect = 5.1e-120
Identity = 239/360 (66.39%), Postives = 271/360 (75.28%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCSE--------FGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +GG + M+ KE Q SE         GR VSRIAV QM   AGFQSFKESA DALADIAIK
Sbjct: 3   DGGGSSMKSKEQQRSELRKCRGNDLGREVSRIAVTQMCNIAGFQSFKESATDALADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL HLG+I++FYA+ AGRTECNVFDIIRG+EELE  SSQGFQ AW+PNHCL  SGSVK+I
Sbjct: 63  YLCHLGRIAAFYANLAGRTECNVFDIIRGIEELE--SSQGFQGAWEPNHCLTNSGSVKSI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           VRYVNS +EIPFAHPLP FPVI NR+PIPSF Q+GE PP KH+P+WLPAFPDAHTYNHS 
Sbjct: 123 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ PREPR EK+          KSLLGLQ+RLVSCGS RSGN      GGESNSF G
Sbjct: 183 ALWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           SCLQEM              DG+SHLS PEVFAPAI+VI+  G  NS DD   ILP  RP
Sbjct: 243 SCLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEVIKGRGFPNSRDDEANILPRARP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+TSRTFLG ++ LN K+ G++ES+FWVRRDDER  DQK + +RD+KKRR+E IL
Sbjct: 303 LVHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDER--DQKHNKERDEKKRRVEYIL 357

[Close]

BLAST of Sed0009468 vs. NCBI nr
Match: KAG6580615.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 441.4 bits (1134), Expect = 6.7e-120
Identity = 238/360 (66.11%), Postives = 271/360 (75.28%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCSE--------FGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +GG + M+ KE Q SE        FGR VSRIAV QM   AGFQSFKESA DALADIAIK
Sbjct: 3   DGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL HLG+I++FYA+ AGRTECNVFDIIRG+EELE  SSQGFQ AW+PNHCL  SGSVK+I
Sbjct: 63  YLCHLGRIAAFYANLAGRTECNVFDIIRGIEELE--SSQGFQGAWEPNHCLTNSGSVKSI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           VRYVNS +EIPFAHPLP FPVI NR+PIPSF Q+GE PP KH+P+WLPAFPDAHTYNHS 
Sbjct: 123 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ PREPR EK+          KSLLGLQ+RLVSCGS RSGN      GGESNSF G
Sbjct: 183 ALWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           SCLQEM              DG+SHLS PEVFAPAI+ I+  G  NS DD   ILP  RP
Sbjct: 243 SCLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEAIKGRGFPNSRDDEANILPRARP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+TSRTFLG ++ LN K+ G++ES+FWVRRDDER  DQK + +RD+KKRR++ IL
Sbjct: 303 LVHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDER--DQKHNKERDEKKRRVDYIL 357

[Close]

BLAST of Sed0009468 vs. NCBI nr
Match: XP_023529053.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 440.3 bits (1131), Expect = 1.5e-119
Identity = 238/360 (66.11%), Postives = 270/360 (75.00%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCSE--------FGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +GG + M+ KE Q SE        FGR VSRIAV QM   AGFQSFKESA+DALADIAIK
Sbjct: 3   DGGRSSMKSKEQQRSELRKCSGNDFGREVSRIAVTQMCNIAGFQSFKESAMDALADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL HLG+I++FYA+ AGRTECNVFDIIRG+EELE  SSQGFQ AW+PNHCL  SGSVK+I
Sbjct: 63  YLCHLGRIAAFYANLAGRTECNVFDIIRGIEELE--SSQGFQGAWEPNHCLTNSGSVKSI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           VRYVNS EEIPFAHPLP FPVI NR+PIPSF Q+GE PP KH+P+WLPAFPDAHTYNHS 
Sbjct: 123 VRYVNSVEEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ PREPR EK+          KSLLGLQ+RLVSCGS RSGN      GGESNSF G
Sbjct: 183 ALWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           SCLQEM              DG+SHLS PEVFAPAI+ I+  G  NS D    ILP  RP
Sbjct: 243 SCLQEMEDGIGYPSENSIGKDGISHLSVPEVFAPAIEAIKGSGFPNSRDVEANILPRARP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+TSRTFLG ++ LN K+ G++E +FWVRRDDER  DQK + +RD+KKRR+E IL
Sbjct: 303 LVHFKLETSRTFLGGSMNLNAKVTGIREPVFWVRRDDER--DQKHNKERDEKKRRVEYIL 357

[Close]

BLAST of Sed0009468 vs. NCBI nr
Match: XP_022983000.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita maxima])

HSP 1 Score: 438.7 bits (1127), Expect = 4.3e-119
Identity = 237/360 (65.83%), Postives = 269/360 (74.72%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCSE--------FGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +GG + M+ KE Q SE        FGR VSRIAV QM   AGFQSFKESA DALADIAIK
Sbjct: 3   DGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL HLG+I++FYA+ AGRTECNVFDIIRG+EELE  SSQGFQ AW+PNHCL  SGSVK I
Sbjct: 63  YLCHLGRIAAFYANLAGRTECNVFDIIRGIEELE--SSQGFQGAWEPNHCLTNSGSVKKI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           VRYVNS EEIPFAHPLP FPVI NR+PIPSF Q+GE PP KH+P+WLPAFPDAHTYNHS 
Sbjct: 123 VRYVNSVEEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ PREPR EK+          KSLLGLQQRLVSCG  RSGN      GGESNSF G
Sbjct: 183 ALWRRKPREPRAEKIELARQRRKAEKSLLGLQQRLVSCGLERSGNGKVEFSGGESNSFLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           SCLQEM              DG+SHLS PEVFAPA++ I+  G  NS DD   ILP  RP
Sbjct: 243 SCLQEMEDGIGFPSENSIGKDGISHLSVPEVFAPALEAIKGSGFPNSRDDEANILPRVRP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+TSRTFLG ++ LN ++ G++ES+FWVRRDDER  +QK + +RD+KKRR+E IL
Sbjct: 303 LVHFKLETSRTFLGGSMNLNAEVTGIRESVFWVRRDDER--NQKHNKERDEKKRRVEYIL 357

[Close]

BLAST of Sed0009468 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.5e-45
Identity = 125/354 (35.31%), Postives = 200/354 (56.50%), Query Frame = 0


Query: 2   SDEGGNNDMEWKEPQCS---EFGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIKYLG 61
           + EG  ND       CS   EF  A ++ AVAQ+ +S G+++FK+ AL++L+  A++Y+ 
Sbjct: 6   AQEGDRNDAA-SSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYIL 65

Query: 62  HLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNIVRY 121
            LGK ++ +A+  GR++CNVFDII  L++L +++  G Q     +  L  S  ++ I+ +
Sbjct: 66  QLGKTATSFANLTGRSQCNVFDIILALDDLTDNN--GEQGISSESCSLGRSIKLREIIDF 125

Query: 122 VNSAEEIPFAHPLPPFPVI---PNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 181
           VNS+EE+PF+ PLP FPV     +RK IPSF ++GETPP KH+P WLPAFPD HTY  + 
Sbjct: 126 VNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET- 185

Query: 182 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGNGG------------E 241
            +W +   +PR +K+          ++LL LQ++LV   S+R+   G            E
Sbjct: 186 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDDE 245

Query: 242 SNSFFGSCLQEMDGMSH--LSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRPLVQFKL 301
           S     S  ++++ ++   LS  E FAPA++  + G  + +  +  K     +P+   KL
Sbjct: 246 SELRSVSSGEKVESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKK----NKPVALSKL 305

Query: 302 KTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           +T + FLG  + L+ +M G           ++R +   R++DRD K+RR E IL
Sbjct: 306 RTEKKFLGQPLDLSLQMKG-----------EDRPISFVREEDRDDKRRRAEFIL 340

[Close]

BLAST of Sed0009468 vs. ExPASy TrEMBL
Match: A0A6J1F3H6 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111441840 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 2.5e-120
Identity = 239/360 (66.39%), Postives = 271/360 (75.28%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCSE--------FGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +GG + M+ KE Q SE         GR VSRIAV QM   AGFQSFKESA DALADIAIK
Sbjct: 3   DGGGSSMKSKEQQRSELRKCRGNDLGREVSRIAVTQMCNIAGFQSFKESATDALADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL HLG+I++FYA+ AGRTECNVFDIIRG+EELE  SSQGFQ AW+PNHCL  SGSVK+I
Sbjct: 63  YLCHLGRIAAFYANLAGRTECNVFDIIRGIEELE--SSQGFQGAWEPNHCLTNSGSVKSI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           VRYVNS +EIPFAHPLP FPVI NR+PIPSF Q+GE PP KH+P+WLPAFPDAHTYNHS 
Sbjct: 123 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ PREPR EK+          KSLLGLQ+RLVSCGS RSGN      GGESNSF G
Sbjct: 183 ALWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           SCLQEM              DG+SHLS PEVFAPAI+VI+  G  NS DD   ILP  RP
Sbjct: 243 SCLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEVIKGRGFPNSRDDEANILPRARP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+TSRTFLG ++ LN K+ G++ES+FWVRRDDER  DQK + +RD+KKRR+E IL
Sbjct: 303 LVHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDER--DQKHNKERDEKKRRVEYIL 357

[Close]

BLAST of Sed0009468 vs. ExPASy TrEMBL
Match: A0A6J1J4F9 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111481673 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 2.1e-119
Identity = 237/360 (65.83%), Postives = 269/360 (74.72%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCSE--------FGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +GG + M+ KE Q SE        FGR VSRIAV QM   AGFQSFKESA DALADIAIK
Sbjct: 3   DGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL HLG+I++FYA+ AGRTECNVFDIIRG+EELE  SSQGFQ AW+PNHCL  SGSVK I
Sbjct: 63  YLCHLGRIAAFYANLAGRTECNVFDIIRGIEELE--SSQGFQGAWEPNHCLTNSGSVKKI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           VRYVNS EEIPFAHPLP FPVI NR+PIPSF Q+GE PP KH+P+WLPAFPDAHTYNHS 
Sbjct: 123 VRYVNSVEEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ PREPR EK+          KSLLGLQQRLVSCG  RSGN      GGESNSF G
Sbjct: 183 ALWRRKPREPRAEKIELARQRRKAEKSLLGLQQRLVSCGLERSGNGKVEFSGGESNSFLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           SCLQEM              DG+SHLS PEVFAPA++ I+  G  NS DD   ILP  RP
Sbjct: 243 SCLQEMEDGIGFPSENSIGKDGISHLSVPEVFAPALEAIKGSGFPNSRDDEANILPRVRP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+TSRTFLG ++ LN ++ G++ES+FWVRRDDER  +QK + +RD+KKRR+E IL
Sbjct: 303 LVHFKLETSRTFLGGSMNLNAEVTGIRESVFWVRRDDER--NQKHNKERDEKKRRVEYIL 357

[Close]

BLAST of Sed0009468 vs. ExPASy TrEMBL
Match: A0A1S3B6Z5 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103486494 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 5.5e-112
Identity = 227/360 (63.06%), Postives = 266/360 (73.89%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCS--------EFGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +G  N+M+ KE Q S        EFGR VS+IAVAQM  S GFQSFKESALD LADIAIK
Sbjct: 3   DGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL  LGKI++FYA+ AGR ECNVFDIIRGLEELE  SSQGF  AWQ +HCLA SGSVKNI
Sbjct: 63  YLHQLGKIATFYANLAGRIECNVFDIIRGLEELE--SSQGFLGAWQSDHCLAKSGSVKNI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           V YVNS +EIPFAHPLP FPVI  R+ IP+F Q+GETPP KH+P+WLPAFPDAHTY+HS 
Sbjct: 123 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ P+E R EK+          KSLLGLQQRLVSCGS RSGN      G ESNS  G
Sbjct: 183 ALWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           +C QE+              DG+SHLS PEVFAPAI+VI+ GG  NS+D+  KILP  RP
Sbjct: 243 TCFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+T +TF+G ++  N KM G++ES+FWVRR+DER  DQK +++RD+KKRR+E IL
Sbjct: 303 LVHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDER--DQKHNNERDEKKRRVEYIL 357

[Close]

BLAST of Sed0009468 vs. ExPASy TrEMBL
Match: A0A5D3DNP1 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002670 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 5.5e-112
Identity = 227/360 (63.06%), Postives = 266/360 (73.89%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCS--------EFGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +G  N+M+ KE Q S        EFGR VS+IAVAQM  S GFQSFKESALD LADIAIK
Sbjct: 3   DGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL  LGKI++FYA+ AGR ECNVFDIIRGLEELE  SSQGF  AWQ +HCLA SGSVKNI
Sbjct: 63  YLHQLGKIATFYANLAGRIECNVFDIIRGLEELE--SSQGFLGAWQSDHCLAKSGSVKNI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           V YVNS +EIPFAHPLP FPVI  R+ IP+F Q+GETPP KH+P+WLPAFPDAHTY+HS 
Sbjct: 123 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ P+E R EK+          KSLLGLQQRLVSCGS RSGN      G ESNS  G
Sbjct: 183 ALWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           +C QE+              DG+SHLS PEVFAPAI+VI+ GG  NS+D+  KILP  RP
Sbjct: 243 TCFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+T +TF+G ++  N KM G++ES+FWVRR+DER  DQK +++RD+KKRR+E IL
Sbjct: 303 LVHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDER--DQKHNNERDEKKRRVEYIL 357

[Close]

BLAST of Sed0009468 vs. ExPASy TrEMBL
Match: A0A0A0LDI8 (Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Csa_3G740170 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.0e-110
Identity = 225/360 (62.50%), Postives = 265/360 (73.61%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQCS--------EFGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIK 63
           +G  N+M+ KE Q S        EF + VS+IAVAQM  S GFQSFKESALD LADIAIK
Sbjct: 3   DGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIAIK 62

Query: 64  YLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNI 123
           YL HLGKI++FYA+ AGR ECNVFDIIRGLEELE+  SQGF  AWQ +HCLA SGSVKNI
Sbjct: 63  YLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQ--SQGFLGAWQSDHCLANSGSVKNI 122

Query: 124 VRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 183
           V YVNS +EIPFAHPLP F VI  R+ IP+F Q+GETPP KH+P+WLPAFPDAHTY+HS 
Sbjct: 123 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHS- 182

Query: 184 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGN------GGESNSFFG 243
           ALWR+ P+E R EK+          KSLLGLQQRLVSCGS RSGN      GGESNS  G
Sbjct: 183 ALWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLG 242

Query: 244 SCLQEM--------------DGMSHLSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRP 303
           +C QE+              DG+SHLS PEVFAPAI+ I+ GG  NS+D+  KILP  RP
Sbjct: 243 TCFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRP 302

Query: 304 LVQFKLKTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           LV FKL+T +TFLG ++ L+ KM G++ES+FWVRRDDER  D+K  ++RD+KKRR+E IL
Sbjct: 303 LVHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDER--DRKHKNERDEKKRRVEYIL 357

[Close]

BLAST of Sed0009468 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 184.1 bits (466), Expect = 1.8e-46
Identity = 125/354 (35.31%), Postives = 200/354 (56.50%), Query Frame = 0


Query: 2   SDEGGNNDMEWKEPQCS---EFGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIKYLG 61
           + EG  ND       CS   EF  A ++ AVAQ+ +S G+++FK+ AL++L+  A++Y+ 
Sbjct: 6   AQEGDRNDAA-SSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYIL 65

Query: 62  HLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHCLATSGSVKNIVRY 121
            LGK ++ +A+  GR++CNVFDII  L++L +++  G Q     +  L  S  ++ I+ +
Sbjct: 66  QLGKTATSFANLTGRSQCNVFDIILALDDLTDNN--GEQGISSESCSLGRSIKLREIIDF 125

Query: 122 VNSAEEIPFAHPLPPFPVI---PNRKPIPSFAQMGETPPPKHVPNWLPAFPDAHTYNHSA 181
           VNS+EE+PF+ PLP FPV     +RK IPSF ++GETPP KH+P WLPAFPD HTY  + 
Sbjct: 126 VNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET- 185

Query: 182 ALWRKTPREPRVEKM---------GKSLLGLQQRLVSCGSTRSGNGG------------E 241
            +W +   +PR +K+          ++LL LQ++LV   S+R+   G            E
Sbjct: 186 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDDE 245

Query: 242 SNSFFGSCLQEMDGMSH--LSAPEVFAPAIDVIQSGGLANSEDDSTKILPIKRPLVQFKL 301
           S     S  ++++ ++   LS  E FAPA++  + G  + +  +  K     +P+   KL
Sbjct: 246 SELRSVSSGEKVESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKK----NKPVALSKL 305

Query: 302 KTSRTFLGATVKLNPKMAGMKESMFWVRRDDERDLDQKRDDDRDQKKRRIENIL 327
           +T + FLG  + L+ +M G           ++R +   R++DRD K+RR E IL
Sbjct: 306 RTEKKFLGQPLDLSLQMKG-----------EDRPISFVREEDRDDKRRRAEFIL 340

[Close]

BLAST of Sed0009468 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-34
Identity = 78/189 (41.27%), Postives = 112/189 (59.26%), Query Frame = 0


Query: 4   EGGNNDMEW----KEPQCSEFGRAVSRIAVAQMGKS--------------AGFQSFKESA 63
           EGG+   E     K  + ++F  +++R+AVAQ+ +S                F SF+ESA
Sbjct: 23  EGGSQQRELHGKRKLFRGNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFSSFQESA 82

Query: 64  LDALADIAIKYLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNHC 123
           LD L D+A++Y+  +GK +  YA+ AGR + N  DI++ LE+L   S  GF      +HC
Sbjct: 83  LDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDL--GSGLGFAGVSDTDHC 142

Query: 124 LATSGSVKNIVRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPAF 175
           LA SG VK+I+RY   AEEIPF + LP FP    +KP PSF+++G  PP +H+P WLPAF
Sbjct: 143 LADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVWLPAF 202

[Close]

BLAST of Sed0009468 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-34
Identity = 111/340 (32.65%), Postives = 169/340 (49.71%), Query Frame = 0


Query: 4   EGGNNDMEWKEPQC----SEFGRAVSRIAVAQMGKSA---------------GFQSFKES 63
           EGG+   E +  +     ++F  A++R+A AQ+ +S                 F SF+E+
Sbjct: 7   EGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRFSSFQET 66

Query: 64  ALDALADIAIKYLGHLGKISSFYADFAGRTECNVFDIIRGLEELEESSSQGFQAAWQPNH 123
           AL+ L D+ I+Y+ ++GK + FY + AGR E N  DI++ LE+L   S  GF  A    H
Sbjct: 67  ALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDL--GSGLGFDGAHDVEH 126

Query: 124 CLATSGSVKNIVRYVNSAEEIPFAHPLPPFPVIPNRKPIPSFAQMGETPPPKHVPNWLPA 183
           CLA SG VK+I+RY   AEEIPF + LP FP    ++P PSF+ +G  PP +H+P WLPA
Sbjct: 127 CLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPVWLPA 186

Query: 184 FPDAHTYNHSAAL-WRKTPREPRVEKMGKSLLGLQQRLVSCGSTRSGNGGESNSFFGSCL 243
           FP+    N S  +   K  R+ +    G SL+ +QQ  V     +     +        +
Sbjct: 187 FPETKMSNGSEEINVDKIERDVQSRDNGSSLMSVQQS-VDVDRLKVQKSMDQKD-VQKPI 246

Query: 244 QEMDGMSHLSAPEVFAPAIDVIQSGGLANS----EDDSTKILPIKRPLVQFKLKTSRTFL 303
           +E +G   L+AP ++    +V  S  +  S    E+ ST  LP K   +   +     + 
Sbjct: 247 EEPEGNPFLAAP-IWVGEKNVSLSRVVCPSELRKEEISTNHLPEKHMSMSHHIPALEAY- 306

Query: 304 GATVKLNPK--MAGMKESMFWVRRDDERDLDQKRDDDRDQ 318
             + K+N K  +AGM++             +QKRD  R Q
Sbjct: 307 ALSDKINDKNRLAGMED-------------EQKRDGARTQ 327

[Close]

BLAST of Sed0009468 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-17
Identity = 62/194 (31.96%), Postives = 99/194 (51.03%), Query Frame = 0


Query: 18  SEFGRAVSRIAVAQMGKSAGFQSFKESALDALADIAIKYLGHLGKISSFYADFAGRTECN 77
           +EF  ++++IAV+Q+ +S G+++   SAL+ L     K+L  L +++S +++ A RTE N
Sbjct: 24  AEFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSLAELASSFSNTANRTEVN 83

Query: 78  VFDIIRGLEELEESSSQGFQAAWQ----PNHCLATSGSVKNIVRYVNSAEEIPFAHPLPP 137
           +FDI+ GL+++  S+S  F          + CL  S  ++N+  +V  A EIPFA PL  
Sbjct: 84  LFDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLSDFVTYAPEIPFAKPL-- 143

Query: 138 FPVIPNRKPIPSF------AQMGETPPPKHVPNWLPAFPDAHTY-------NHSAALWRK 195
               P R+   SF        +  +     VP WLP FPD+          N S  LW  
Sbjct: 144 ----PRRERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPDSSLCSDRCSKDNRSDHLWEN 203

The following BLAST results are available for this feature:

BLAST of Sed0009468 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017372.1	1.8e-120	66.39	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]
XP_022934759.1	5.1e-120	66.39	transcription initiation factor TFIID subunit 8-like [Cucurbita moschata]	[more]
KAG6580615.1	6.7e-120	66.11	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]
XP_023529053.1	1.5e-119	66.11	transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo...	[more]
XP_022983000.1	4.3e-119	65.83	transcription initiation factor TFIID subunit 8-like [Cucurbita maxima]	[more]

BLAST of Sed0009468 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	2.5e-45	35.31	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0009468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3H6	2.5e-120	66.39	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J4F9	2.1e-119	65.83	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3B6Z5	5.5e-112	63.06	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DNP1	5.5e-112	63.06	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LDI8	1.0e-110	62.50	Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Cs...	[more]

BLAST of Sed0009468 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34340.1	1.8e-46	35.31	TBP-associated factor 8	[more]
AT3G02160.1	2.7e-34	41.27	Bromodomain transcription factor	[more]
AT5G15570.1	2.7e-34	32.65	Bromodomain transcription factor	[more]
AT1G31240.1	1.7e-17	31.96	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006565	Bromodomain associated domain	SMART	SM00576	17neu3	coord: 18..94 e-value: 5.8E-20 score: 82.3
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 19..88 e-value: 3.3E-17 score: 62.3
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	PFAM	PF10406	TAF8_C	coord: 157..175 e-value: 7.0E-6 score: 26.5
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	CDD	cd08049	TAF8	coord: 157..201 e-value: 1.8369E-9 score: 51.1195
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 15..101 e-value: 5.5E-18 score: 66.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..326
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 10..325

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009468.1	Sed0009468.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity