Sed0009378 (gene) Chayote v1

Overview


Name	Sed0009378
Type	gene
Organism	Sechium edule (Chayote v1)
Description	hybrid signal transduction histidine kinase L
Location	LG04: 4840538 .. 4841421 (+)
RNA-Seq Expression	Sed0009378
Synteny	Sed0009378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTTCTTGCTTCCAACTCTTCACTAAATTCTTTCCTCTCCCTTCCCTCCCACTCAAAGAACCAATCAAAATCAGCTCTTCAAATACTAAAACCACTCCCCAGCTTCCTTAATTTTTCCTAATCCCCATTAATCCAATTCCCAGCAACCTCGGCTCGACATGTCGGACTTCCAACAGCAACAGCCACAGCAGACGCCTCTGGTTTATCCGATCACCGCGACCGACCCCGGCAGCCAGCCTCCAAACTCCCACCATTACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCGGTTATTCTCGTCATATCGGTTCTCGCTTGCTTCCTCGGCCGCCTCTGCAACCGGGGAGTCGAAAAACCGAGGCCGGAGAAGGCGACACAAGGCGGGGATCCCCCGAGAGGGAAAGAACCCAAATTGCACCCTGAAAAAGAAGGGGACATAGAATTTGGATTTGATTTGAAAAACCCAAATGGGAAAGATCACAAAATGCCACCTCCTGAACATGGAGGAAGCAAAGGAAATGGACCAAATGGCAATGGCAATGGCAATGGAAATGGCTTAAAGCCCTTTGAAAATGGCGGCGCAATGAGAAGCGAAATGAAGCAATCTGATCATCGTCAGGTTCATTTCAACTTCAAATCTCGCCATGTTTGACACCACACTTGTAACACTAAACACAAATTCCTCTTAAGTTTTATATATATATAGCTGTCTTTGTGGATTTGATCTTTTGTTGTTATCTAATCACAACTTCGATTCAATCATTAATCTGTGATCATTTTTTTCAATTCTTAGTAGGAATTGTTGAAATTGTCTTCATCCAATATCTTTAAGCTCACGGCATCTTCCATTAAGGGATGCTTTTTTTTATTTATT

mRNA sequence

TTCTCTTCTTGCTTCCAACTCTTCACTAAATTCTTTCCTCTCCCTTCCCTCCCACTCAAAGAACCAATCAAAATCAGCTCTTCAAATACTAAAACCACTCCCCAGCTTCCTTAATTTTTCCTAATCCCCATTAATCCAATTCCCAGCAACCTCGGCTCGACATGTCGGACTTCCAACAGCAACAGCCACAGCAGACGCCTCTGGTTTATCCGATCACCGCGACCGACCCCGGCAGCCAGCCTCCAAACTCCCACCATTACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCGGTTATTCTCGTCATATCGGTTCTCGCTTGCTTCCTCGGCCGCCTCTGCAACCGGGGAGTCGAAAAACCGAGGCCGGAGAAGGCGACACAAGGCGGGGATCCCCCGAGAGGGAAAGAACCCAAATTGCACCCTGAAAAAGAAGGGGACATAGAATTTGGATTTGATTTGAAAAACCCAAATGGGAAAGATCACAAAATGCCACCTCCTGAACATGGAGGAAGCAAAGGAAATGGACCAAATGGCAATGGCAATGGCAATGGAAATGGCTTAAAGCCCTTTGAAAATGGCGGCGCAATGAGAAGCGAAATGAAGCAATCTGATCATCGTCAGGTTCATTTCAACTTCAAATCTCGCCATGTTTGACACCACACTTGTAACACTAAACACAAATTCCTCTTAAGTTTTATATATATATAGCTGTCTTTGTGGATTTGATCTTTTGTTGTTATCTAATCACAACTTCGATTCAATCATTAATCTGTGATCATTTTTTTCAATTCTTAGTAGGAATTGTTGAAATTGTCTTCATCCAATATCTTTAAGCTCACGGCATCTTCCATTAAGGGATGCTTTTTTTTATTTATT

Coding sequence (CDS)

ATGTCGGACTTCCAACAGCAACAGCCACAGCAGACGCCTCTGGTTTATCCGATCACCGCGACCGACCCCGGCAGCCAGCCTCCAAACTCCCACCATTACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCGGTTATTCTCGTCATATCGGTTCTCGCTTGCTTCCTCGGCCGCCTCTGCAACCGGGGAGTCGAAAAACCGAGGCCGGAGAAGGCGACACAAGGCGGGGATCCCCCGAGAGGGAAAGAACCCAAATTGCACCCTGAAAAAGAAGGGGACATAGAATTTGGATTTGATTTGAAAAACCCAAATGGGAAAGATCACAAAATGCCACCTCCTGAACATGGAGGAAGCAAAGGAAATGGACCAAATGGCAATGGCAATGGCAATGGAAATGGCTTAAAGCCCTTTGAAAATGGCGGCGCAATGAGAAGCGAAATGAAGCAATCTGATCATCGTCAGGTTCATTTCAACTTCAAATCTCGCCATGTTTGA

Protein sequence

MSDFQQQQPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVEKPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDHKMPPPEHGGSKGNGPNGNGNGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKSRHV

Homology

[Close]

BLAST of Sed0009378 vs. NCBI nr
Match: XP_038892720.1 (uncharacterized protein LOC120081701 [Benincasa hispida])

HSP 1 Score: 188.0 bits (476), Expect = 6.7e-44
Identity = 113/168 (67.26%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 5   QQQQPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNR 64
           QQQQ QQ   VYP TA   GSQPP SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCNR
Sbjct: 13  QQQQQQQPAFVYPNTAATVGSQPPPSHH-SNGSFGAVFIVLAVIVVISALACFLGRLCNR 72

Query: 65  GVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDHKMPPP-EHGGS 124
            VE   +P+PEK T  G  PRGKEPKLHP+KEGDIEFGFDL+NPNG   K P    +GGS
Sbjct: 73  RVENGQRPKPEK-THSGARPRGKEPKLHPDKEGDIEFGFDLRNPNGNKGKFPSSGGNGGS 132

Query: 125 KG-NGPNGNG----NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS 164
           KG +  NGNG    NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Sbjct: 133 KGKSNGNGNGTNGPNGHGNSFKPFENGGETRSEIKHTDHHEGDFNFKA 178

[Close]

BLAST of Sed0009378 vs. NCBI nr
Match: XP_008446202.1 (PREDICTED: hybrid signal transduction histidine kinase L [Cucumis melo] >ADN33832.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0034312.1 hybrid signal transduction histidine kinase L [Cucumis melo var. makuwa] >TYK15608.1 hybrid signal transduction histidine kinase L [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42
Identity = 112/175 (64.00%), Postives = 125/175 (71.43%), Query Frame = 0


Query: 5   QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCN 64
           QQQQ QQ   VYP T AT  GSQ P SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCN
Sbjct: 14  QQQQQQQPAYVYPDTAATSAGSQVPPSHH-SNGSFGAVFIVLAVIVVISALACFLGRLCN 73

Query: 65  RGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDHKMPPPEHGGS 124
           R VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGFDL+NP+GK  K PP  +G  
Sbjct: 74  RRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKG-KFPPGGNGNG 133

Query: 125 KGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS 164
            GNG      NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Sbjct: 134 NGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEGDFNFKA 186

[Close]

BLAST of Sed0009378 vs. NCBI nr
Match: XP_022151116.1 (aspartate and glycine-rich protein-like [Momordica charantia])

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-41
Identity = 109/165 (66.06%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 8   QPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE 67
           + QQ  LVYP TA    +QPP SHH SNGSFGAVFIVLAVI+V+S LACFLGRLCNR VE
Sbjct: 3   EQQQPGLVYPNTA---AAQPPPSHH-SNGSFGAVFIVLAVIVVVSALACFLGRLCNRRVE 62

Query: 68  --KPRPEKATQ---GGDPPRGKE-PKLHPEKEGDIEFGFDLKNPNGKDHKMPPPEHGGSK 127
             KP+PEK T    GG  P+GKE PK HP K+GDIEFGFDL+NPNGK  K P   +GGSK
Sbjct: 63  NQKPKPEKKTHGGGGGGRPKGKELPKPHPNKDGDIEFGFDLRNPNGKG-KFPSGGNGGSK 122

Query: 128 G---NGPNGNGNGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS 164
           G   NG NG+G+G+GNG KPFENG  MRSE+K SDH +  FNFK+
Sbjct: 123 GKGNNGNNGHGHGHGNGFKPFENGSDMRSEIKYSDHHEADFNFKA 162

[Close]

BLAST of Sed0009378 vs. NCBI nr
Match: KAE8648720.1 (hypothetical protein Csa_008998 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 5.3e-41
Identity = 112/177 (63.28%), Postives = 125/177 (70.62%), Query Frame = 0


Query: 5   QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCN 64
           QQQQ QQ   VYP T AT  GSQ P  HH SNGSFGAVFIVLAVI+VIS LACFLGRLCN
Sbjct: 15  QQQQQQQPAYVYPDTAATSAGSQVPPPHH-SNGSFGAVFIVLAVIVVISALACFLGRLCN 74

Query: 65  RGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDHKMPP------ 124
           R VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGFDL+NP+GK  K P       
Sbjct: 75  RRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKG-KFPSGGNGST 134

Query: 125 -PEHGGSKGNGPNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS 164
              +GGSKG G NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Sbjct: 135 GNGNGGSKGKG-NGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEGDFNFKA 188

[Close]

BLAST of Sed0009378 vs. NCBI nr
Match: XP_011655621.2 (la-related protein Larp4B [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 5.3e-41
Identity = 112/177 (63.28%), Postives = 125/177 (70.62%), Query Frame = 0


Query: 5   QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCN 64
           QQQQ QQ   VYP T AT  GSQ P  HH SNGSFGAVFIVLAVI+VIS LACFLGRLCN
Sbjct: 15  QQQQQQQPAYVYPDTAATSAGSQVPPPHH-SNGSFGAVFIVLAVIVVISALACFLGRLCN 74

Query: 65  RGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDHKMPP------ 124
           R VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGFDL+NP+GK  K P       
Sbjct: 75  RRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKG-KFPSGGNGST 134

Query: 125 -PEHGGSKGNGPNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS 164
              +GGSKG G NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Sbjct: 135 GNGNGGSKGKG-NGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEGDFNFKA 188

[Close]

BLAST of Sed0009378 vs. ExPASy TrEMBL
Match: A0A5A7ST81 (Hybrid signal transduction histidine kinase L OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001050 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 6.2e-43
Identity = 112/175 (64.00%), Postives = 125/175 (71.43%), Query Frame = 0


Query: 5   QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCN 64
           QQQQ QQ   VYP T AT  GSQ P SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCN
Sbjct: 14  QQQQQQQPAYVYPDTAATSAGSQVPPSHH-SNGSFGAVFIVLAVIVVISALACFLGRLCN 73

Query: 65  RGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDHKMPPPEHGGS 124
           R VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGFDL+NP+GK  K PP  +G  
Sbjct: 74  RRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKG-KFPPGGNGNG 133

Query: 125 KGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS 164
            GNG      NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Sbjct: 134 NGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEGDFNFKA 186

[Close]

BLAST of Sed0009378 vs. ExPASy TrEMBL
Match: E5GBJ1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 6.2e-43
Identity = 112/175 (64.00%), Postives = 125/175 (71.43%), Query Frame = 0


Query: 5   QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCN 64
           QQQQ QQ   VYP T AT  GSQ P SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCN
Sbjct: 14  QQQQQQQPAYVYPDTAATSAGSQVPPSHH-SNGSFGAVFIVLAVIVVISALACFLGRLCN 73

Query: 65  RGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDHKMPPPEHGGS 124
           R VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGFDL+NP+GK  K PP  +G  
Sbjct: 74  RRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKG-KFPPGGNGNG 133

Query: 125 KGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS 164
            GNG      NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Sbjct: 134 NGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEGDFNFKA 186

[Close]

BLAST of Sed0009378 vs. ExPASy TrEMBL
Match: A0A1S3BF63 (hybrid signal transduction histidine kinase L OS=Cucumis melo OX=3656 GN=LOC103489006 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 6.2e-43
Identity = 112/175 (64.00%), Postives = 125/175 (71.43%), Query Frame = 0


Query: 5   QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCN 64
           QQQQ QQ   VYP T AT  GSQ P SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCN
Sbjct: 14  QQQQQQQPAYVYPDTAATSAGSQVPPSHH-SNGSFGAVFIVLAVIVVISALACFLGRLCN 73

Query: 65  RGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDHKMPPPEHGGS 124
           R VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGFDL+NP+GK  K PP  +G  
Sbjct: 74  RRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKG-KFPPGGNGNG 133

Query: 125 KGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS 164
            GNG      NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Sbjct: 134 NGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEGDFNFKA 186

[Close]

BLAST of Sed0009378 vs. ExPASy TrEMBL
Match: A0A6J1DDL5 (aspartate and glycine-rich protein-like OS=Momordica charantia OX=3673 GN=LOC111019124 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.9e-42
Identity = 109/165 (66.06%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 8   QPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE 67
           + QQ  LVYP TA    +QPP SHH SNGSFGAVFIVLAVI+V+S LACFLGRLCNR VE
Sbjct: 3   EQQQPGLVYPNTA---AAQPPPSHH-SNGSFGAVFIVLAVIVVVSALACFLGRLCNRRVE 62

Query: 68  --KPRPEKATQ---GGDPPRGKE-PKLHPEKEGDIEFGFDLKNPNGKDHKMPPPEHGGSK 127
             KP+PEK T    GG  P+GKE PK HP K+GDIEFGFDL+NPNGK  K P   +GGSK
Sbjct: 63  NQKPKPEKKTHGGGGGGRPKGKELPKPHPNKDGDIEFGFDLRNPNGKG-KFPSGGNGGSK 122

Query: 128 G---NGPNGNGNGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS 164
           G   NG NG+G+G+GNG KPFENG  MRSE+K SDH +  FNFK+
Sbjct: 123 GKGNNGNNGHGHGHGNGFKPFENGSDMRSEIKYSDHHEADFNFKA 162

[Close]

BLAST of Sed0009378 vs. ExPASy TrEMBL
Match: A0A0A0KTP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601520 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 115/187 (61.50%), Postives = 129/187 (68.98%), Query Frame = 0


Query: 1   MSDFQQQQP------QQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISV 60
           MS+ QQQQP      QQ   VYP T AT  GSQ P  HH SNGSFGAVFIVLAVI+VIS 
Sbjct: 1   MSELQQQQPQRQQQQQQPAYVYPDTAATSAGSQVPPPHH-SNGSFGAVFIVLAVIVVISA 60

Query: 61  LACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDH 120
           LACFLGRLCNR VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGFDL+NP+GK  
Sbjct: 61  LACFLGRLCNRRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKG- 120

Query: 121 KMPP-------PEHGGSKGNGPNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQ 164
           K P          +GGSKG G NGNG       NG+GN  KPFENGG  RSE+K +DH +
Sbjct: 121 KFPSGGNGSTGNGNGGSKGKG-NGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHE 180

[Close]

BLAST of Sed0009378 vs. TAIR 10
Match: AT1G70470.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23530.1); Has 64 Blast hits to 64 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 10; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 3.8e-13
Identity = 57/148 (38.51%), Postives = 76/148 (51.35%), Query Frame = 0


Query: 6   QQQPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRG 65
           Q Q  Q P VYP T++   S    S   S+GSFG  FIVLA ILV++ LAC  GRLCNRG
Sbjct: 4   QPQEFQQPQVYPSTSSSTSSSFSPSSSGSSGSFGTAFIVLAAILVLAALACVFGRLCNRG 63

Query: 66  VEKPRPE---KATQGGDPPRGKEPKL-----HPEKEGDIEFGFDLKNPNGKDHKMPPPEH 125
            ++ + +   KA++   P   K  ++      P + GD+EFGFD+K P       P   +
Sbjct: 64  GKQHKDKNNNKASKHEKPSSKKSREIRPVEREPRERGDVEFGFDMKRPG--PMSKPTGRN 123

Query: 126 GG-------SKGNGPNGNGNGNGNGLKP 139
           GG       +K  G  G G G   G +P
Sbjct: 124 GGDIEFGFDNKRGGGGGGGGGGKGGKRP 149

[Close]

BLAST of Sed0009378 vs. TAIR 10
Match: AT1G23530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70470.1); Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-10
Identity = 65/174 (37.36%), Postives = 87/174 (50.00%), Query Frame = 0


Query: 1   MSDFQQQQPQQTPLVYPITAT----DPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLAC 60
           M D   QQ QQ  +VYP        DP ++P +S   S+G+FG VFIVLAVI V+S LAC
Sbjct: 1   MGDQGVQQMQQPIVVYPNAYNKQYPDPSTKPSSSSG-SSGNFGTVFIVLAVIFVLSALAC 60

Query: 61  FLGRLCNR--------GVEKPRPEKATQGGDPPRGKEP-KLHPEKEGDIEFGFDLK---- 120
             GRLCNR          + P+ EKA+      R   P +  P + GD++FGFD+K    
Sbjct: 61  VFGRLCNRESRAAKQQHSKHPKHEKAS--SKKSREIRPVEREPRERGDMDFGFDMKRPEP 120

Query: 121 --NPNGKDHKMPPPEHGGSKGNGPNGNGNGNGNGLKPFENGGAMRSEMKQS-DH 155
              P+G+D      E G     G  G   G G G  P     A+R ++ ++ DH
Sbjct: 121 IEKPSGRDGG-EDIEFGFDNKRGERGREGGGGGGPPPPNIKHAVRFKLPENGDH 170

[Close]

BLAST of Sed0009378 vs. TAIR 10
Match: AT1G74055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-05
Identity = 27/70 (38.57%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 6  QQQPQQ-------TPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFL 65
          QQQPQQ       TP+    T  +  + P   +HYS+ S G  F V++V+++++VL+CFL
Sbjct: 16 QQQPQQQLGGNEITPMA---TNANLIAAPNAPNHYSSSSIGPFFAVISVLIILAVLSCFL 75

Query: 66 GRLCNRGVEK 69
          GR C R  ++
Sbjct: 76 GRFCARSRQR 82

The following BLAST results are available for this feature:

BLAST of Sed0009378 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892720.1	6.7e-44	67.26	uncharacterized protein LOC120081701 [Benincasa hispida]	[more]
XP_008446202.1	1.3e-42	64.00	PREDICTED: hybrid signal transduction histidine kinase L [Cucumis melo] >ADN3383...	[more]
XP_022151116.1	1.8e-41	66.06	aspartate and glycine-rich protein-like [Momordica charantia]	[more]
KAE8648720.1	5.3e-41	63.28	hypothetical protein Csa_008998 [Cucumis sativus]	[more]
XP_011655621.2	5.3e-41	63.28	la-related protein Larp4B [Cucumis sativus]	[more]

BLAST of Sed0009378 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0009378 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ST81	6.2e-43	64.00	Hybrid signal transduction histidine kinase L OS=Cucumis melo var. makuwa OX=119...	[more]
E5GBJ1	6.2e-43	64.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BF63	6.2e-43	64.00	hybrid signal transduction histidine kinase L OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1DDL5	8.9e-42	66.06	aspartate and glycine-rich protein-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0KTP5	1.2e-41	61.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601520 PE=4 SV=1	[more]

BLAST of Sed0009378 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70470.1	3.8e-13	38.51	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G23530.1	5.2e-10	37.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G74055.1	1.3e-05	38.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR33429	OS02G0708000 PROTEIN-RELATED	coord: 1..155
None	No IPR available	PANTHER	PTHR33429:SF7	OS02G0708000 PROTEIN	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009378.1	Sed0009378.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0016740	transferase activity