Sed0009363 (gene) Chayote v1

Overview


Name	Sed0009363
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pyridoxal 5'-phosphate synthase subunit PdxS
Location	LG05: 45924477 .. 45925799 (-)
RNA-Seq Expression	Sed0009363
Synteny	Sed0009363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAATATAAAAAGTTAAAAATTGAAAGTAAAAAAAAAAAGAAGTTATAAGATATTTGTAAACAAAAGGACAATCAAAATTAAAAAAAAAATTAGAGTAACAAATAAACATTTTGAAAGGAAGACATTTAAACAATGATTTTACATTAATATTTTAATATAGAAAACAAATATGTGTGAATTAAAATAAAAATATTTGAGGTAATTAAAAGTTTGCAAGTTGCAAGAGAATGTTTAAGGAGGTACATTTAACTCAATATATGTAATGGGATAAAGAATGATAAAAATATATGAGATAGAACATTAGGGAGTTGTTTATTTTAATCTTTGAAATAATAAAATTGTTAAATATAAATATATTGATAAGTTGTTTATTTTATTTTTAACATAAATTTAATATGTGGACTAAACGTGAGCATTTTTTAAAATGTCAAAAGTAAAATGTTTATATTAAAACCATAGAACCAGATTGAAATTAGATTCCAAAATAAGTAGGAAAAGAAAAAGAAATTTAAAAACTTTTCTATCTAAGTGATTTCTTTTTATTAACTACCCAATCCTATGGACGTAAAAGTCCAAACTTAAGTCTAGTTTCATATTCTAATTTTTTCTAAAAGAAAAGTTTCATACACTAAATTCTTAGTAGATATCTCGAATAAAATAAATTAAAAAAAAATTCTTCAAAATTTAAATTTCAATCTCTTACTCTAAGGGATCTACTACTCATATTCTAATTTAAATTATTGTTATCTTAACTAAGTTGAAGTTCAGGCTCATTCTAATTTAACAGAGACGAAGCAATCCTTGTTCTTCGTCAAAGTCAGACTGGCCCAAATACTCTGCGATGACGTCATCATAGACGTCATCAACGCCGACCAGGCTTGCATTGTCGAAGAGGTTGGAGCCTACGCTGGCATGGCCTTCCCCGTCGCCTGAATGACTGACCCCCAACTCATCAAGGAAATCAAACAGGTCGTTACCATTCCCGTCATGGCCAAAGCCCGAATCGGCCATTTCGTTGATGCTCAGATTCTCAAAGCTATCGATATCGATTACGTTGACGAGAGCGAAGTTCTCACTCTCGTCAACGAAGATAACCACATCAACAAGCACAACTTTTGCATTCCCTTCGTTTGCGGCTGCTGCAACCTCGGCGAGGCGGTGCGCCGCATTTGCGAGGGCGCGGCCATGATCCGGACGAAGGGAGAGGCTGGCACTGGGAATATCATTGAGGCGGTGCGACACGTGCGGTCCGTGATTTTACTCTTAAGCCACACTTTAAGGTAGTATGATATGATATATATATATATACACACACTCCAG

mRNA sequence

ATAAAATATAAAAAGTTAAAAATTGAAAGTAAAAAAAAAAAGAAGTTATAAGATATTTGTAAACAAAAGGACAATCAAAATTAAAAAAAAAATTAGAGTAACAAATAAACATTTTGAAAGGAAGACATTTAAACAATGATTTTACATTAATATTTTAATATAGAAAACAAATATGTGTGAATTAAAATAAAAATATTTGAGGTAATTAAAAGTTTGCAAGTTGCAAGAGAATGTTTAAGGAGGTACATTTAACTCAATATATGTAATGGGATAAAGAATGATAAAAATATATGAGATAGAACATTAGGGAGTTGTTTATTTTAATCTTTGAAATAATAAAATTGTTAAATATAAATATATTGATAAGTTGTTTATTTTATTTTTAACATAAATTTAATATGTGGACTAAACGTGAGCATTTTTTAAAATGTCAAAAGTAAAATGTTTATATTAAAACCATAGAACCAGATTGAAATTAGATTCCAAAATAAGTAGGAAAAGAAAAAGAAATTTAAAAACTTTTCTATCTAAGTGATTTCTTTTTATTAACTACCCAATCCTATGGACGTAAAAGTCCAAACTTAAGTCTAGTTTCATATTCTAATTTTTTCTAAAAGAAAAGTTTCATACACTAAATTCTTAGTAGATATCTCGAATAAAATAAATTAAAAAAAAATTCTTCAAAATTTAAATTTCAATCTCTTACTCTAAGGGATCTACTACTCATATTCTAATTTAAATTATTGTTATCTTAACTAAGTTGAAGTTCAGGCTCATTCTAATTTAACAGAGACGAAGCAATCCTTGTTCTTCGTCAAAGTCAGACTGGCCCAAATACTCTGCGATGACGTCATCATAGACGTCATCAACGCCGACCAGGCTTGCATTGTCGAAGAGGTTGGAGCCTACGCTGGCATGGCCTTCCCCGTCGCCTGAATGACTGACCCCCAACTCATCAAGGAAATCAAACAGGTCGTTACCATTCCCGTCATGGCCAAAGCCCGAATCGGCCATTTCGTTGATGCTCAGATTCTCAAAGCTATCGATATCGATTACGTTGACGAGAGCGAAGTTCTCACTCTCGTCAACGAAGATAACCACATCAACAAGCACAACTTTTGCATTCCCTTCGTTTGCGGCTGCTGCAACCTCGGCGAGGCGGTGCGCCGCATTTGCGAGGGCGCGGCCATGATCCGGACGAAGGGAGAGGCTGGCACTGGGAATATCATTGAGGCGGTGCGACACGTGCGGTCCGTGATTTTACTCTTAAGCCACACTTTAAGGTAGTATGATATGATATATATATATATACACACACTCCAG

Coding sequence (CDS)

ATGACTGACCCCCAACTCATCAAGGAAATCAAACAGGTCGTTACCATTCCCGTCATGGCCAAAGCCCGAATCGGCCATTTCGTTGATGCTCAGATTCTCAAAGCTATCGATATCGATTACGTTGACGAGAGCGAAGTTCTCACTCTCGTCAACGAAGATAACCACATCAACAAGCACAACTTTTGCATTCCCTTCGTTTGCGGCTGCTGCAACCTCGGCGAGGCGGTGCGCCGCATTTGCGAGGGCGCGGCCATGATCCGGACGAAGGGAGAGGCTGGCACTGGGAATATCATTGAGGCGGTGCGACACGTGCGGTCCGTGATTTTACTCTTAAGCCACACTTTAAGGTAG

Protein sequence

MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHNFCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVILLLSHTLR

Homology

[Close]

BLAST of Sed0009363 vs. NCBI nr
Match: PNX55479.1 (pyridoxal biosynthesis protein PDX1.3 [Trifolium pratense] >GAU48448.1 hypothetical protein TSUD_383450 [Trifolium subterraneum])

HSP 1 Score: 190.3 bits (482), Expect = 9.5e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 79  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 138

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 139 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVL 186

[Close]

BLAST of Sed0009363 vs. NCBI nr
Match: TXG58805.1 (hypothetical protein EZV62_016634 [Acer yangbiense])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 77  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 137 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM 184

[Close]

BLAST of Sed0009363 vs. NCBI nr
Match: XP_019439657.1 (PREDICTED: pyridoxal 5'-phosphate synthase subunit PDX1.3 [Lupinus angustifolius] >OIW14052.1 hypothetical protein TanjilG_11397 [Lupinus angustifolius])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 77  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 137 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM 184

[Close]

BLAST of Sed0009363 vs. NCBI nr
Match: KAF1895042.1 (hypothetical protein Lal_00022539 [Lupinus albus])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 77  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 137 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM 184

[Close]

BLAST of Sed0009363 vs. NCBI nr
Match: KAE9598954.1 (putative pyridoxal 5'-phosphate synthase (glutamine hydrolyzing) [Lupinus albus])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 77  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 137 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM 184

[Close]

BLAST of Sed0009363 vs. ExPASy Swiss-Prot
Match: Q8L940 (Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana OX=3702 GN=PDX13 PE=1 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-46
Identity = 93/107 (86.92%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQ+IKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDY+DESEVLTL +ED+HINKHN
Sbjct: 77  MSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTLADEDHHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSV 108
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV
Sbjct: 137 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSV 183

[Close]

BLAST of Sed0009363 vs. ExPASy Swiss-Prot
Match: O80448 (Pyridoxal 5'-phosphate synthase subunit PDX1.1 OS=Arabidopsis thaliana OX=3702 GN=PDX11 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.8e-46
Identity = 90/107 (84.11%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DP++IKEIK  VTIPVMAKARIGHFV+AQIL+AI +DYVDESEVLTL +EDNHINKHN
Sbjct: 78  MSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADEDNHINKHN 137

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSV 108
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGN++EAVRHVRSV
Sbjct: 138 FKIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSV 184

[Close]

BLAST of Sed0009363 vs. ExPASy Swiss-Prot
Match: Q39963 (Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Hevea brasiliensis OX=3981 GN=PDX1 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.8e-46
Identity = 93/108 (86.11%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLT  +E+NHINKHN
Sbjct: 77  MSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGN+IEAVRHVRSV+
Sbjct: 137 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHVRSVM 184

[Close]

BLAST of Sed0009363 vs. ExPASy Swiss-Prot
Match: Q9FT25 (Pyridoxal 5'-phosphate synthase subunit PDX1 OS=Phaseolus vulgaris OX=3885 GN=PDX1 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.9e-46
Identity = 93/108 (86.11%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIK+ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL ++ NHINKHN
Sbjct: 80  MSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADDANHINKHN 139

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 140 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM 187

[Close]

BLAST of Sed0009363 vs. ExPASy Swiss-Prot
Match: Q9AT63 (Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Ginkgo biloba OX=3311 GN=PDX1 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 8.4e-44
Identity = 88/108 (81.48%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DP LIKEIK  VTIPVMAKARIGHFV+AQIL+AI IDY+DESEVLT  ++ +HINKHN
Sbjct: 77  MSDPGLIKEIKSAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTPADDXHHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGN+IEAVRHVRSV+
Sbjct: 137 FRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVIEAVRHVRSVL 184

[Close]

BLAST of Sed0009363 vs. ExPASy TrEMBL
Match: A0A2Z6NWE5 (SOR_SNZ domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_383450 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.6e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 79  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 138

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 139 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVL 186

[Close]

BLAST of Sed0009363 vs. ExPASy TrEMBL
Match: A0A2K3JN70 (Pyridoxal biosynthesis protein PDX1.3 OS=Trifolium pratense OX=57577 GN=L195_g049108 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.6e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 79  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 138

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 139 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVL 186

[Close]

BLAST of Sed0009363 vs. ExPASy TrEMBL
Match: A0A5B7BC32 (SOR_SNZ domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_035229 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.0e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 78  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 137

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 138 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM 185

[Close]

BLAST of Sed0009363 vs. ExPASy TrEMBL
Match: A0A6A5PDI7 (SOR_SNZ domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00022539 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.0e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 77  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 137 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM 184

[Close]

BLAST of Sed0009363 vs. ExPASy TrEMBL
Match: A0A6A4PCH9 (Putative pyridoxal 5'-phosphate synthase (Glutamine hydrolyzing) OS=Lupinus albus OX=3870 GN=Lalb_Chr15g0086471 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.0e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQLIKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDYVDESEVLTL +EDNHINKHN
Sbjct: 77  MSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSVI 109
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV+
Sbjct: 137 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM 184

[Close]

BLAST of Sed0009363 vs. TAIR 10
Match: AT5G01410.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-47
Identity = 93/107 (86.92%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DPQ+IKEIKQ VTIPVMAKARIGHFV+AQIL+AI IDY+DESEVLTL +ED+HINKHN
Sbjct: 77  MSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTLADEDHHINKHN 136

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSV 108
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGNIIEAVRHVRSV
Sbjct: 137 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSV 183

[Close]

BLAST of Sed0009363 vs. TAIR 10
Match: AT2G38230.1 (pyridoxine biosynthesis 1.1 )

HSP 1 Score: 184.5 bits (467), Expect = 4.9e-47
Identity = 90/107 (84.11%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M+DP++IKEIK  VTIPVMAKARIGHFV+AQIL+AI +DYVDESEVLTL +EDNHINKHN
Sbjct: 78  MSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADEDNHINKHN 137

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGEAGTGNIIEAVRHVRSV 108
           F IPFVCGC NLGEA+RRI EGAAMIRTKGEAGTGN++EAVRHVRSV
Sbjct: 138 FKIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSV 184

[Close]

BLAST of Sed0009363 vs. TAIR 10
Match: AT3G16050.1 (pyridoxine biosynthesis 1.2 )

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-33
Identity = 64/109 (58.72%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MTDPQLIKEIKQVVTIPVMAKARIGHFVDAQILKAIDIDYVDESEVLTLVNEDNHINKHN 60
           M DP LIKE+K+ V++PVMA+AR+GHFV+AQIL+++ +DY+DESE++++ ++D+ INKHN
Sbjct: 81  MPDPVLIKEVKRAVSVPVMARARVGHFVEAQILESLAVDYIDESEIISVADDDHFINKHN 140

Query: 61  FCIPFVCGCCNLGEAVRRICEGAAMIRTKGE-AGTGNIIEAVRHVRSVI 109
           F  PF+CGC + GEA+RRI EGAAMIR +G+   TGNI E V++VRS++
Sbjct: 141 FRSPFICGCRDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLM 189

The following BLAST results are available for this feature:

BLAST of Sed0009363 vs. NCBI nr


Match Name	E-value	Identity	Description
PNX55479.1	9.5e-45	88.89	pyridoxal biosynthesis protein PDX1.3 [Trifolium pratense] >GAU48448.1 hypotheti...	[more]
TXG58805.1	1.2e-44	88.89	hypothetical protein EZV62_016634 [Acer yangbiense]	[more]
XP_019439657.1	1.2e-44	88.89	PREDICTED: pyridoxal 5'-phosphate synthase subunit PDX1.3 [Lupinus angustifolius...	[more]
KAF1895042.1	1.2e-44	88.89	hypothetical protein Lal_00022539 [Lupinus albus]	[more]
KAE9598954.1	1.2e-44	88.89	putative pyridoxal 5'-phosphate synthase (glutamine hydrolyzing) [Lupinus albus]	[more]

BLAST of Sed0009363 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L940	1.8e-46	86.92	Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana OX=3702 G...	[more]
O80448	6.8e-46	84.11	Pyridoxal 5'-phosphate synthase subunit PDX1.1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q39963	6.8e-46	86.11	Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Hevea brasiliensis OX=3...	[more]
Q9FT25	8.9e-46	86.11	Pyridoxal 5'-phosphate synthase subunit PDX1 OS=Phaseolus vulgaris OX=3885 GN=PD...	[more]
Q9AT63	8.4e-44	81.48	Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Ginkgo biloba OX=3311 G...	[more]

BLAST of Sed0009363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2Z6NWE5	4.6e-45	88.89	SOR_SNZ domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_3834...	[more]
A0A2K3JN70	4.6e-45	88.89	Pyridoxal biosynthesis protein PDX1.3 OS=Trifolium pratense OX=57577 GN=L195_g04...	[more]
A0A5B7BC32	6.0e-45	88.89	SOR_SNZ domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_035229 ...	[more]
A0A6A5PDI7	6.0e-45	88.89	SOR_SNZ domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00022539 PE=3 ...	[more]
A0A6A4PCH9	6.0e-45	88.89	Putative pyridoxal 5'-phosphate synthase (Glutamine hydrolyzing) OS=Lupinus albu...	[more]

BLAST of Sed0009363 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01410.1	1.3e-47	86.92	Aldolase-type TIM barrel family protein	[more]
AT2G38230.1	4.9e-47	84.11	pyridoxine biosynthesis 1.1	[more]
AT3G16050.1	2.3e-33	58.72	pyridoxine biosynthesis 1.2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 1..113 e-value: 1.5E-57 score: 196.8
IPR033755	PdxS/SNZ N-terminal domain	PFAM	PF01680	SOR_SNZ	coord: 1..108 e-value: 5.1E-58 score: 196.3
None	No IPR available	PANTHER	PTHR31829:SF0	PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATED	coord: 1..108
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PANTHER	PTHR31829	PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATED	coord: 1..108
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PROSITE	PS51129	PDXS_SNZ_2	coord: 1..116 score: 56.669731
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009363.1	Sed0009363.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006520	cellular amino acid metabolic process
biological_process	GO:0042823	pyridoxal phosphate biosynthetic process
biological_process	GO:0008615	pyridoxine biosynthetic process
biological_process	GO:0042819	vitamin B6 biosynthetic process
molecular_function	GO:0016843	amine-lyase activity
molecular_function	GO:0003824	catalytic activity