Sed0009308 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATATGCAAGTAACCAAGGTATGTCTCTATTTCCTCTTTTTTTTTTTACATGCCATTGATGAAAACTTGAAGAGAAATATGTAAAATTTTGAATTATAGAAACTAAATGGAAAAATATAACCAACCATGAGTATATTAAATAGTATGTGATTGTATGTCAAAACTAATTGGTACTGGAGTTGGTAGTATATATATCTTATAAATATATTAAAATTCCTCTTGTTTTTAGTGTTGGACAATATGAGAATGAAATCAAATACTTGCTTAAGTTTTATCGACTTGGGTTTGGATTCAAATTTGTGAATCAAATAACTATTTGGAACTCTAGTTTCATTTTAAAATTTTGGTCATGAGAAAAGTAGTCATAATATCTCAAAAATGCATTGAAAACTTCTATCGCTTCGAATATGTGATAAAATAAGAATTTTTGACGCAATATATTATATAACTTAGTATTTATGAGATTATATGTTTGAATCTTTCTTCTCTCGACATTATTGAGAAAATGAAAAACATAATAGTGATTTGATGGTTTTGATGAACAGGAGGTAGAGCACAAAAATGCAAAAGGTGAAACAATGGAGAAAGTAGTAGAGACCGTAGATTATCGGACATCAGCAGGGAAACCACAGGAAAAGAGGACCGTGCAGGTTATACATCACCCCAATCCAAACACCAAGCAAGATTTCGCCACCAGCGGCGGCGTTTTGGCCGGTGCCGCGGCCGCCGTCGCAAACACCCTCCAATCTGCTCAGGAAGCCATCTCTCGCAAATAA ATGAATATGCAAGTAACCAAGGAGGTAGAGCACAAAAATGCAAAAGGTGAAACAATGGAGAAAGTAGTAGAGACCGTAGATTATCGGACATCAGCAGGGAAACCACAGGAAAAGAGGACCGTGCAGGTTATACATCACCCCAATCCAAACACCAAGCAAGATTTCGCCACCAGCGGCGGCGTTTTGGCCGGTGCCGCGGCCGCCGTCGCAAACACCCTCCAATCTGCTCAGGAAGCCATCTCTCGCAAATAA ATGAATATGCAAGTAACCAAGGAGGTAGAGCACAAAAATGCAAAAGGTGAAACAATGGAGAAAGTAGTAGAGACCGTAGATTATCGGACATCAGCAGGGAAACCACAGGAAAAGAGGACCGTGCAGGTTATACATCACCCCAATCCAAACACCAAGCAAGATTTCGCCACCAGCGGCGGCGTTTTGGCCGGTGCCGCGGCCGCCGTCGCAAACACCCTCCAATCTGCTCAGGAAGCCATCTCTCGCAAATAA MNMQVTKEVEHKNAKGETMEKVVETVDYRTSAGKPQEKRTVQVIHHPNPNTKQDFATSGGVLAGAAAAVANTLQSAQEAISRK Homology
BLAST of Sed0009308 vs. NCBI nr
Match: XP_022947813.1 (uncharacterized protein LOC111451572 [Cucurbita moschata] >XP_023007040.1 uncharacterized protein LOC111499649 [Cucurbita maxima] >XP_023532058.1 uncharacterized protein LOC111794336 [Cucurbita pepo subsp. pepo] >KAG6605184.1 hypothetical protein SDJN03_02501, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 108.2 bits (269), Expect = 3.4e-20 Identity = 61/83 (73.49%), Postives = 72/83 (86.75%), Query Frame = 0
BLAST of Sed0009308 vs. NCBI nr
Match: KAG7035166.1 (hypothetical protein SDJN02_01961, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 104.0 bits (258), Expect = 6.4e-19 Identity = 59/81 (72.84%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of Sed0009308 vs. NCBI nr
Match: XP_031737171.1 (uncharacterized protein LOC105434696 [Cucumis sativus]) HSP 1 Score: 101.3 bits (251), Expect = 4.2e-18 Identity = 59/83 (71.08%), Postives = 71/83 (85.54%), Query Frame = 0
BLAST of Sed0009308 vs. NCBI nr
Match: XP_016902934.1 (PREDICTED: uncharacterized protein LOC103501120 [Cucumis melo]) HSP 1 Score: 99.8 bits (247), Expect = 1.2e-17 Identity = 58/84 (69.05%), Postives = 71/84 (84.52%), Query Frame = 0
BLAST of Sed0009308 vs. NCBI nr
Match: XP_038902745.1 (uncharacterized protein LOC120089373 [Benincasa hispida]) HSP 1 Score: 99.8 bits (247), Expect = 1.2e-17 Identity = 60/82 (73.17%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Sed0009308 vs. ExPASy TrEMBL
Match: A0A6J1L1V6 (uncharacterized protein LOC111499649 OS=Cucurbita maxima OX=3661 GN=LOC111499649 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20 Identity = 61/83 (73.49%), Postives = 72/83 (86.75%), Query Frame = 0
BLAST of Sed0009308 vs. ExPASy TrEMBL
Match: A0A6J1G7N3 (uncharacterized protein LOC111451572 OS=Cucurbita moschata OX=3662 GN=LOC111451572 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20 Identity = 61/83 (73.49%), Postives = 72/83 (86.75%), Query Frame = 0
BLAST of Sed0009308 vs. ExPASy TrEMBL
Match: A0A1S4E3Y2 (uncharacterized protein LOC103501120 OS=Cucumis melo OX=3656 GN=LOC103501120 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.9e-18 Identity = 58/84 (69.05%), Postives = 71/84 (84.52%), Query Frame = 0
BLAST of Sed0009308 vs. ExPASy TrEMBL
Match: A0A0A0LNC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G427870 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 7.2e-16 Identity = 54/79 (68.35%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of Sed0009308 vs. ExPASy TrEMBL
Match: A0A5A7VM80 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00210 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.7e-15 Identity = 53/78 (67.95%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of Sed0009308 vs. TAIR 10
Match: AT5G67265.1 (unknown protein. ) HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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