Sed0009293 (gene) Chayote v1

Overview


Name	Sed0009293
Type	gene
Organism	Sechium edule (Chayote v1)
Description	B-box zinc finger family protein
Location	LG10: 8219527 .. 8221529 (-)
RNA-Seq Expression	Sed0009293
Synteny	Sed0009293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCACCCACCTCATCTTTTTATCCCTTTGTTTAATATTATATTATCTTCTTTGTTTTTGTCTATTTTTTCTCTATTATCATTGATCGTTAGGCATTATTGTTATAACCTAACAAAAGCAGCGGCCGACACCAAAAACAATCAGATATCTCAAACTGGGGGACGATCAAAATCGAATTTTGAAGATACCCTTTTCAGGTTTTGATCAAATTATGAGCAATTTGTGAAGTTTATGAGGTGGGGTTTTGATATTGAACGTAAAGTTTTGATCTTTTTAATGGATTATGTTGTGGGTGGAAATGAGTACTGAGAACAAGAACCAGTTTTGATGAGGATAATTTGTGATTCCTGTGAAAGTGCTGCAGCCACTTTGTTTTGTGCTGCTGATGAGGCTGCTCTTTGTGTAGCATGTGATGCCAAGGTAATATATATATAAAAGCTAAAGTTTCTTTTTTTTTTCTTTTTTTTTTATAAATTACCTTTTAGTTTTAGTTTAAAGGTTTGATTTTTAAGTGTTTTGTGTGTTGATTGGGCAGGTGCATATGTGCAATAAGCTTGCGAGTCGCCATGTAAGGGTTGGACTTGCAGATCCGAGTGAAGTTTCTATGTGTGATATATGTGAAAATGCACCAGGTATATATATATTAGTAATGGAGTGACCAGGTTTTATTATTTTTGTCTTGTTGAAGTTTTTTTATTTTTTATTTTATTTATTTGAGGGTTTTTTGGTTGGTTAATTTTGTGGGGGAAAAATGGTTTGCAGCTTTCTTTTACTGTGAAGTAGATGGCAGTTCTTTGTGTTTACAATGCGACGTGATTGTTCATGTTGGAGGCAAGAGAATGCACAAGAGATATCTTGTGCTGAGGCAGGGAGTTGAGGTTAGTGATTTTATCAAAATCCTAATTAACATGAAAAGATTCTCTTTAAATTTGATGGTGAAAACAATATGAAAATGGAAATATTTCTAAAACTACTTCGACCACTACACCTTTAAACTTTTACTTTGACTGATCATGTCTTTATTCTTTGTTAAGTATTGTAATAAGTTCTTTTTATGTTGTTAAATGACATGTTGCAATCAACTCTTTGTACTTAATAGAATAGTATGCCACTAAAAGTATAGCTCCACTGATATGAGTTTAACCTAGTAACAAAAATTTTACAAATTTAAATCCTCAAACACGGTTGAATATAAAAAAATAAAAATTGACTGCAATACTTAAAGCTATGTTTGATAACTATTAGGTTTTTGAAATTTAAATCAACTCTCTTACCGTATGTTTTTTCTTACTTGGATATCTACCTCTTACCTATATTTGTAGAAACCAAATCAAATTTGGATATAAAAAAAAGAGAAATACTTCTCTACACACCAAGTAGAGTGACTCTACTTGTTGCTCAAGTGTCATCACTTAGGTTCACAAAAAAAATTTCATTTCAAAGAAAAAATCAACAAACAAGAAAAGTTAAAAAATATTTATAGCTCTACGTGATGCCACATAAAAAACAAGTAAAGTCACTCTACTTGTTCATGTGTAGAGAAGTATTTCTCTAAAAAAAATAATAATTTCCAAAAGTTTGTTTTTTTTTATAAATTGGTTAACATTTACTTACTTTCCGAATAAATTTGTAAAAAATGTGAAACACATTTCACGAAGGAAGTGATTCTAACATTTAATGAAGTAGAGGAAATAATTAATCAAATTAAAATTTCAAAATTGTAATGGTTACAAACTTCAAAGTTAAAAATAGTTTGAGCACATTCTAAGAAACTCACTAGTTTGGTCATTTTTGCAGTTTCCTGGGGATAAACAAAACGATGAGGCTGAGAAAGTGAGAGGGCAAAATCAAGATGGGGTTGATAAGCATTCCAATGGAGGAGGAAATTCAAAACGGGGTAACAAAGTGATTGATTTGAACACGTAATGTTACTATACTAAATAATCAGCTGGTTATTTTGGGGTACTTTTCGAGTAATAACGTAGGAAACTTTCGTAGTCCAG

mRNA sequence

TTCCACCCACCTCATCTTTTTATCCCTTTGTTTAATATTATATTATCTTCTTTGTTTTTGTCTATTTTTTCTCTATTATCATTGATCGTTAGGCATTATTGTTATAACCTAACAAAAGCAGCGGCCGACACCAAAAACAATCAGATATCTCAAACTGGGGGACGATCAAAATCGAATTTTGAAGATACCCTTTTCAGGTTTTGATCAAATTATGAGCAATTTGTGAAGTTTATGAGGTGGGGTTTTGATATTGAACGTAAAGTTTTGATCTTTTTAATGGATTATGTTGTGGGTGGAAATGAGTACTGAGAACAAGAACCAGTTTTGATGAGGATAATTTGTGATTCCTGTGAAAGTGCTGCAGCCACTTTGTTTTGTGCTGCTGATGAGGCTGCTCTTTGTGTAGCATGTGATGCCAAGGTGCATATGTGCAATAAGCTTGCGAGTCGCCATGTAAGGGTTGGACTTGCAGATCCGAGTGAAGTTTCTATGTGTGATATATGTGAAAATGCACCAGCTTTCTTTTACTGTGAAGTAGATGGCAGTTCTTTGTGTTTACAATGCGACGTGATTGTTCATGTTGGAGGCAAGAGAATGCACAAGAGATATCTTGTGCTGAGGCAGGGAGTTGAGTTTCCTGGGGATAAACAAAACGATGAGGCTGAGAAAGTGAGAGGGCAAAATCAAGATGGGGTTGATAAGCATTCCAATGGAGGAGGAAATTCAAAACGGGGTAACAAAGTGATTGATTTGAACACGTAATGTTACTATACTAAATAATCAGCTGGTTATTTTGGGGTACTTTTCGAGTAATAACGTAGGAAACTTTCGTAGTCCAG

Coding sequence (CDS)

ATGAGGATAATTTGTGATTCCTGTGAAAGTGCTGCAGCCACTTTGTTTTGTGCTGCTGATGAGGCTGCTCTTTGTGTAGCATGTGATGCCAAGGTGCATATGTGCAATAAGCTTGCGAGTCGCCATGTAAGGGTTGGACTTGCAGATCCGAGTGAAGTTTCTATGTGTGATATATGTGAAAATGCACCAGCTTTCTTTTACTGTGAAGTAGATGGCAGTTCTTTGTGTTTACAATGCGACGTGATTGTTCATGTTGGAGGCAAGAGAATGCACAAGAGATATCTTGTGCTGAGGCAGGGAGTTGAGTTTCCTGGGGATAAACAAAACGATGAGGCTGAGAAAGTGAGAGGGCAAAATCAAGATGGGGTTGATAAGCATTCCAATGGAGGAGGAAATTCAAAACGGGGTAACAAAGTGATTGATTTGAACACGTAA

Protein sequence

MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICENAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQNDEAEKVRGQNQDGVDKHSNGGGNSKRGNKVIDLNT

Homology

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BLAST of Sed0009293 vs. NCBI nr
Match: XP_023003940.1 (B-box zinc finger protein 19-like [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 6.9e-61
Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCE+AAATLFCAADEAALC ACD KVHMCNKLASRHVRVGLA PSEVS CDICE
Sbjct: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQND---------- 120
           NAPAFFYCE+DGSSLCLQCDV+VHVGGKRMHKRYL L Q VEFPGDKQND          
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDMNVQAME 120

Query: 121 EAEKVRGQNQDGVDKHSNGGGNSKRGNKVIDLN 144
           +AE VRGQNQDGVD  SNG G+SKRGN+VIDLN
Sbjct: 121 QAETVRGQNQDGVD--SNGDGHSKRGNQVIDLN 151

[Close]

BLAST of Sed0009293 vs. NCBI nr
Match: XP_023517413.1 (B-box zinc finger protein 19-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 9.0e-61
Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCE+AAATLFCAADEAALC ACD KVHMCNKLASRHVRVGLA PSEVS CDICE
Sbjct: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQND---------- 120
           NAPAFFYCE+DGSSLCLQCDV+VHVGGKRMHKRYL L Q VEFPGDKQND          
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVLVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120

Query: 121 EAEKVRGQNQDGVDKHSNGGGNSKRGNKVIDLN 144
           +AE VRGQNQDGVD  SNG G+SKRGN+VIDLN
Sbjct: 121 QAETVRGQNQDGVD--SNGDGHSKRGNEVIDLN 151

[Close]

BLAST of Sed0009293 vs. NCBI nr
Match: XP_022963232.1 (B-box zinc finger protein 19-like [Cucurbita moschata])

HSP 1 Score: 242.7 bits (618), Expect = 2.0e-60
Identity = 124/153 (81.05%), Postives = 131/153 (85.62%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCE+AAATLFCAADEAALC ACD KVHMCNKLASRHVRVGLA PSEVS CDICE
Sbjct: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQND---------- 120
           NAPAFFYCE+DGSSLCLQCDV+VHVGGKRMHKRYL L Q VEFPGDKQND          
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120

Query: 121 EAEKVRGQNQDGVDKHSNGGGNSKRGNKVIDLN 144
           + E VRGQNQDGVD  SNG G+SKRGN+VIDLN
Sbjct: 121 QVETVRGQNQDGVD--SNGDGHSKRGNEVIDLN 151

[Close]

BLAST of Sed0009293 vs. NCBI nr
Match: KAG7026753.1 (B-box zinc finger protein 19 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.0 bits (598), Expect = 4.2e-58
Identity = 119/143 (83.22%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCE+AAATLFCAADEAALC ACD KVHMCNKLASRHVRVGLA PSEVS CDICE
Sbjct: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQNDEAEKVRGQNQ 120
           NAPAFFYCE+DGSSLCLQCDV+VHVGGKRMHKRYL L Q VEFPGDKQ+D  +    QNQ
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQHDPKDL---QNQ 120

Query: 121 DGVDKHSNGGGNSKRGNKVIDLN 144
           DGVD  SNG G+SKRGN+VIDLN
Sbjct: 121 DGVD--SNGDGHSKRGNEVIDLN 138

[Close]

BLAST of Sed0009293 vs. NCBI nr
Match: XP_008440795.1 (PREDICTED: B-box zinc finger protein 19-like isoform X1 [Cucumis melo] >KAA0025692.1 B-box zinc finger protein 19-like isoform X1 [Cucumis melo var. makuwa] >TYK12567.1 B-box zinc finger protein 19-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 231.1 bits (588), Expect = 6.0e-57
Identity = 122/167 (73.05%), Postives = 133/167 (79.64%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCESAAATLFCAADEAALC  CD KVHMCNKLASRHVRVGLA+PSEV  CDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQND---------- 120
           NAPAFFYCE+DGSSLCLQCDVIVHVGGKRMHKRYL LRQ VEFPGDK+ND          
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPME 120

Query: 121 EAEKVRGQNQD-------------GVDK-HSNGGGNSKRGNKVIDLN 144
           + EKV+GQN++             GV+K +SNG G+SKR NKVIDLN
Sbjct: 121 QVEKVKGQNEERGEIEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLN 167

[Close]

BLAST of Sed0009293 vs. ExPASy Swiss-Prot
Match: C0SVM5 (B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-49
Identity = 97/143 (67.83%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CD+CE+AAA +FCAADEAALC  CD KVHMCNKLASRHVRVGLA+PS    CDICE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQNDEAEKVRGQNQ 120
           NAPAFFYCE+DGSSLCLQCD++VHVGGKR H R+L+LRQ +EFPGDK  +   +   QNQ
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGDKPKENNTRDNLQNQ 120

Query: 121 DGVDKHSNGGGNSKRGNKVIDLN 144
             V  + NG  N K  +++IDLN
Sbjct: 121 -RVSTNGNGEANGKIDDEMIDLN 142

[Close]

BLAST of Sed0009293 vs. ExPASy Swiss-Prot
Match: Q9SJU5 (B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 4.1e-48
Identity = 96/146 (65.75%), Postives = 115/146 (78.77%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CD+CESAAA +FCAADEAALC +CD KVH CNKLASRH+RVGLADPS    CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQN--DEAEKVRGQ 120
           NAPAFFYCE+DGSSLCLQCD++VHVGGKR H+R+L+LRQ +EFPGDK N  D+      +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQK 120

Query: 121 NQDGVDKHSNGGGNSKRGNKVIDLNT 145
              G  + SNG G+    + +IDLN+
Sbjct: 121 ASSGRGQESNGNGD--HDHNMIDLNS 144

[Close]

BLAST of Sed0009293 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 2.7e-20
Identity = 51/107 (47.66%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGL-ADPSEVSMCDIC 60
           M+I C+ CE+A AT+ C ADEAALC ACD K+H  NKLA +H RV L A  S +  CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ENAPAFFYCEVDGSSLCLQCDVIVHVGGKRM--HKRYLV--LRQGVE 103
           + A  FF+C  D + LC +CDV +H     +  H+R+L+  ++ G+E
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLE 107

[Close]

BLAST of Sed0009293 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 7.5e-18
Identity = 53/117 (45.30%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPS-EVSMCDIC 60
           M+I CD CE A ATL C ADEAALC  CD +VH  NKLAS+H R+ L   S +   CDIC
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60

Query: 61  ENAPAFFYCEVDGSSLCLQCDVIVHVGGKRM--HKRYLVLRQGVEFPGDKQNDEAEK 115
               AF +C  D + LC  CD   H    R   H+R+L     V       N E EK
Sbjct: 61  LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEK 117

[Close]

BLAST of Sed0009293 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.8e-18
Identity = 51/117 (43.59%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPS-EVSMCDIC 60
           M+I CD CE A AT+ C ADEAALC  CD ++H  NKLAS+H R+ L   S +   CDIC
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  ENAPAFFYCEVDGSSLCLQCDVIVHVGGKRM--HKRYLVLRQGVEFPGDKQNDEAEK 115
           +   AF +C  D + LC  CD  +HV   R   H+R+L     V       + E EK
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEK 117

[Close]

BLAST of Sed0009293 vs. ExPASy TrEMBL
Match: A0A6J1KT68 (B-box zinc finger protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111497383 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.3e-61
Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCE+AAATLFCAADEAALC ACD KVHMCNKLASRHVRVGLA PSEVS CDICE
Sbjct: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQND---------- 120
           NAPAFFYCE+DGSSLCLQCDV+VHVGGKRMHKRYL L Q VEFPGDKQND          
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDMNVQAME 120

Query: 121 EAEKVRGQNQDGVDKHSNGGGNSKRGNKVIDLN 144
           +AE VRGQNQDGVD  SNG G+SKRGN+VIDLN
Sbjct: 121 QAETVRGQNQDGVD--SNGDGHSKRGNQVIDLN 151

[Close]

BLAST of Sed0009293 vs. ExPASy TrEMBL
Match: A0A6J1HEQ5 (B-box zinc finger protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111463506 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 9.7e-61
Identity = 124/153 (81.05%), Postives = 131/153 (85.62%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCE+AAATLFCAADEAALC ACD KVHMCNKLASRHVRVGLA PSEVS CDICE
Sbjct: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQND---------- 120
           NAPAFFYCE+DGSSLCLQCDV+VHVGGKRMHKRYL L Q VEFPGDKQND          
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120

Query: 121 EAEKVRGQNQDGVDKHSNGGGNSKRGNKVIDLN 144
           + E VRGQNQDGVD  SNG G+SKRGN+VIDLN
Sbjct: 121 QVETVRGQNQDGVD--SNGDGHSKRGNEVIDLN 151

[Close]

BLAST of Sed0009293 vs. ExPASy TrEMBL
Match: A0A5A7SKM7 (B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001490 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.9e-57
Identity = 122/167 (73.05%), Postives = 133/167 (79.64%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCESAAATLFCAADEAALC  CD KVHMCNKLASRHVRVGLA+PSEV  CDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQND---------- 120
           NAPAFFYCE+DGSSLCLQCDVIVHVGGKRMHKRYL LRQ VEFPGDK+ND          
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPME 120

Query: 121 EAEKVRGQNQD-------------GVDK-HSNGGGNSKRGNKVIDLN 144
           + EKV+GQN++             GV+K +SNG G+SKR NKVIDLN
Sbjct: 121 QVEKVKGQNEERGEIEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLN 167

[Close]

BLAST of Sed0009293 vs. ExPASy TrEMBL
Match: A0A1S3B2K6 (B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485108 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.9e-57
Identity = 122/167 (73.05%), Postives = 133/167 (79.64%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCESAAATLFCAADEAALC  CD KVHMCNKLASRHVRVGLA+PSEV  CDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQND---------- 120
           NAPAFFYCE+DGSSLCLQCDVIVHVGGKRMHKRYL LRQ VEFPGDK+ND          
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPME 120

Query: 121 EAEKVRGQNQD-------------GVDK-HSNGGGNSKRGNKVIDLN 144
           + EKV+GQN++             GV+K +SNG G+SKR NKVIDLN
Sbjct: 121 QVEKVKGQNEERGEIEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLN 167

[Close]

BLAST of Sed0009293 vs. ExPASy TrEMBL
Match: A0A6J1GE89 (B-box zinc finger protein 19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453156 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 121/168 (72.02%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CDSCE+AAATLFCAADEAALC ACDAKVHMCNKLASRHVRVGLA+PS+V  CDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSQVPRCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQND---------- 120
           NAPAFF+CE+DGSSLCLQCDVIVHVGGKRMHKRYL LRQ VEFPGD QND          
Sbjct: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPME 120

Query: 121 EAEKVRGQNQD---------------GVDKHSNGGGNSKRGNKVIDLN 144
           + E VRGQNQ+               GV  +SNG G+SKR NKVIDLN
Sbjct: 121 QVETVRGQNQERGEEIEKQEEDLRFSGVKGYSNGDGHSKRPNKVIDLN 168

[Close]

BLAST of Sed0009293 vs. TAIR 10
Match: AT4G38960.1 (B-box type zinc finger family protein )

HSP 1 Score: 197.2 bits (500), Expect = 9.0e-51
Identity = 97/143 (67.83%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CD+CE+AAA +FCAADEAALC  CD KVHMCNKLASRHVRVGLA+PS    CDICE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQNDEAEKVRGQNQ 120
           NAPAFFYCE+DGSSLCLQCD++VHVGGKR H R+L+LRQ +EFPGDK  +   +   QNQ
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGDKPKENNTRDNLQNQ 120

Query: 121 DGVDKHSNGGGNSKRGNKVIDLN 144
             V  + NG  N K  +++IDLN
Sbjct: 121 -RVSTNGNGEANGKIDDEMIDLN 142

[Close]

BLAST of Sed0009293 vs. TAIR 10
Match: AT2G21320.1 (B-box zinc finger family protein )

HSP 1 Score: 192.2 bits (487), Expect = 2.9e-49
Identity = 96/146 (65.75%), Postives = 115/146 (78.77%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGLADPSEVSMCDICE 60
           MRI+CD+CESAAA +FCAADEAALC +CD KVH CNKLASRH+RVGLADPS    CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQN--DEAEKVRGQ 120
           NAPAFFYCE+DGSSLCLQCD++VHVGGKR H+R+L+LRQ +EFPGDK N  D+      +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQK 120

Query: 121 NQDGVDKHSNGGGNSKRGNKVIDLNT 145
              G  + SNG G+    + +IDLN+
Sbjct: 121 ASSGRGQESNGNGD--HDHNMIDLNS 144

[Close]

BLAST of Sed0009293 vs. TAIR 10
Match: AT4G38960.3 (B-box type zinc finger family protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-44
Identity = 97/186 (52.15%), Postives = 114/186 (61.29%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAK----------------------------- 60
           MRI+CD+CE+AAA +FCAADEAALC  CD K                             
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60

Query: 61  --------------VHMCNKLASRHVRVGLADPSEVSMCDICENAPAFFYCEVDGSSLCL 120
                         VHMCNKLASRHVRVGLA+PS    CDICENAPAFFYCE+DGSSLCL
Sbjct: 61  IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCL 120

Query: 121 QCDVIVHVGGKRMHKRYLVLRQGVEFPGDKQNDEAEKVRGQNQDGVDKHSNGGGNSKRGN 144
           QCD++VHVGGKR H R+L+LRQ +EFPGDK  +   +   QNQ  V  + NG  N K  +
Sbjct: 121 QCDMVVHVGGKRTHGRFLLLRQRIEFPGDKPKENNTRDNLQNQ-RVSTNGNGEANGKIDD 180

[Close]

BLAST of Sed0009293 vs. TAIR 10
Match: AT4G38960.2 (B-box type zinc finger family protein )

HSP 1 Score: 147.5 bits (371), Expect = 8.2e-36
Identity = 72/110 (65.45%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 34  MCNKLASRHVRVGLADPSEVSMCDICENAPAFFYCEVDGSSLCLQCDVIVHVGGKRMHKR 93
           MCNKLASRHVRVGLA+PS    CDICENAPAFFYCE+DGSSLCLQCD++VHVGGKR H R
Sbjct: 1   MCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGR 60

Query: 94  YLVLRQGVEFPGDKQNDEAEKVRGQNQDGVDKHSNGGGNSKRGNKVIDLN 144
           +L+LRQ +EFPGDK  +   +   QNQ  V  + NG  N K  +++IDLN
Sbjct: 61  FLLLRQRIEFPGDKPKENNTRDNLQNQ-RVSTNGNGEANGKIDDEMIDLN 109

[Close]

BLAST of Sed0009293 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21
Identity = 51/107 (47.66%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 1   MRIICDSCESAAATLFCAADEAALCVACDAKVHMCNKLASRHVRVGL-ADPSEVSMCDIC 60
           M+I C+ CE+A AT+ C ADEAALC ACD K+H  NKLA +H RV L A  S +  CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ENAPAFFYCEVDGSSLCLQCDVIVHVGGKRM--HKRYLV--LRQGVE 103
           + A  FF+C  D + LC +CDV +H     +  H+R+L+  ++ G+E
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLE 107

The following BLAST results are available for this feature:

BLAST of Sed0009293 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003940.1	6.9e-61	81.70	B-box zinc finger protein 19-like [Cucurbita maxima]	[more]
XP_023517413.1	9.0e-61	81.70	B-box zinc finger protein 19-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022963232.1	2.0e-60	81.05	B-box zinc finger protein 19-like [Cucurbita moschata]	[more]
KAG7026753.1	4.2e-58	83.22	B-box zinc finger protein 19 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008440795.1	6.0e-57	73.05	PREDICTED: B-box zinc finger protein 19-like isoform X1 [Cucumis melo] >KAA00256...	[more]

BLAST of Sed0009293 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0SVM5	1.3e-49	67.83	B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1	[more]
Q9SJU5	4.1e-48	65.75	B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2	[more]
Q9SYM2	2.7e-20	47.66	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q9SID1	7.5e-18	45.30	B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2	[more]
Q96288	9.8e-18	43.59	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]

BLAST of Sed0009293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KT68	3.3e-61	81.70	B-box zinc finger protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111497383 PE...	[more]
A0A6J1HEQ5	9.7e-61	81.05	B-box zinc finger protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111463506 ...	[more]
A0A5A7SKM7	2.9e-57	73.05	B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3B2K6	2.9e-57	73.05	B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1GE89	1.1e-56	72.02	B-box zinc finger protein 19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sed0009293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38960.1	9.0e-51	67.83	B-box type zinc finger family protein	[more]
AT2G21320.1	2.9e-49	65.75	B-box zinc finger family protein	[more]
AT4G38960.3	1.6e-44	52.15	B-box type zinc finger family protein	[more]
AT4G38960.2	8.2e-36	65.45	B-box type zinc finger family protein	[more]
AT1G78600.1	2.0e-21	47.66	light-regulated zinc finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 18..63 e-value: 1.6E-9 score: 47.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 19..52 e-value: 2.4E-7 score: 30.8
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 18..63 score: 9.399432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..92
None	No IPR available	PANTHER	PTHR31832:SF5	B-BOX ZINC FINGER PROTEIN 19	coord: 1..92
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 23..63 e-value: 4.84116E-11 score: 51.5295
None	No IPR available	SUPERFAMILY	57845	B-box zinc-binding domain	coord: 17..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009293.1	Sed0009293.1	mRNA
Sed0009293.2	Sed0009293.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding