Sed0009285 (gene) Chayote v1

Overview


Name	Sed0009285
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ferredoxin
Location	LG01: 25152296 .. 25154001 (+)
RNA-Seq Expression	Sed0009285
Synteny	Sed0009285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACTTAATTAGAGGGAGGAAGAAGGGCATTGGAGTAATTTGAAAAGAGAATTAAAATAGAAGCGTTGGTAAAGACTGAAAACCTAAGTCGCCAACTCAGGAGTGATCGCAAAAGCAAAAGTAAAAGCAAACACTCTCAACATCTACCGGCGGCGTCAGGGCTTTCAGTTTTGATCGCAAAGCTCTCTCTCTCTCTCTGTAAGATCTCTCTCTTTTCTGTTTTCTCCTGATCGGATCATCGTTATTCTGCCAATTTTTTATGCTCCTTATGTGGATCAAACTGAACTGATGCCTATTACACACTCTTGATTTCCGTTGATTCTTCTTTTTTATAAATTTCGGAGTACTTCTCGATTTTGATTCCGCCGGATTTTCTTTTTCCACCAACTTCCTGTGCATGCACGATTATATCTTTGCTTCTTTCTAATCCAAATGTCCAGTTGTTGTTGCTGGTTCTATACAACTTCTCTTTGCTTTCTGCAATCTTTTGGATCTTGACCTTTTTTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTGCTTTTTGAGTCTCTAATCATACGCGGAAGGCGTCGTTTCTTTATTCTCCTTTTCTAACCTGCTATGGATGTTTGTGTTTTATCTTTTTTTCCACTGTTTTAGAATCGACTTATTATTGGTTACTTAGTCTATGATTTATCAGTTTAAAATTCATTTTCATTCAAGAATGAACCTACTGTTCTTTCGATTTCTGGAACTTGGTTGGATGAGTGTAGTATCTTGAAACGTTAGGAAGATATTTTGTACCCAAGATTTGTATGAATTACTTTCATGTGGTAATAATATGTATGGTTTCAATTCAAGTGTAGACGTAGTCAAGATTGATGTGTAATTCATCCTCTATTGTGTGTCATAGATGATTTCACTTTATTTCTGTTTAAATTCCCTAATTTTATTTTCATGCCCTCGACTATATATCCATTCAGCTCCGATCCGAACATGTCGACCGTGCAACTCTCCACATCCTGCTTGATCAGACATGTAGCACCGAGGAAAACATCTGCTGCCCTTGTTCGGAGGCCATCGTCCTTGGGGTCCATTCGGAACGTATCCCAGGCATTTGGATTGAAATCTTCCTCATTCAGAGTCTCAGCAATGGCTTCTTACAAAGTGAAATTAATTGGACCGGATGGTGAAGAGAATGAGTTTGAGGCCCCTGATGATGCTTACATTCTTGACTCCGCCGAGAGTGCTGGATTGGATCTACCTTACTCTTGCAGGGCTGGGGCTTGCTCTACTTGTGCTGGTCAAGTAGTTTCCGGGGCAGTGGACCAGTCGGATGGATCGTTCTTGGACGAAAAGCAGATGGAGACGGGGTATGTCCTAACCTGCGTCGCATATCCACAATCCGACTGTGTCATCCACACACACAAGGAAGGTGATTTGTACTGATTTCTTTGTTGGTGTGCATTTCATCAGCTCAATCTGATTGGAACTCCAATCATGGGTTAGACTTTATGATTAGTCTTTGAGGTTGATATGTCTGTCTCTAGAATTGTGTTCGTACTACAGCAAATTTATGTTAATGCTTTAGTGTAAGGTGAAGCTTTGAACATTATTCATGAATAATGGATTTTCCTGTTGCCATGTATGGTAGGTGATGGAAATACCTACTTCTGATGGCTTTAATTTAATTAAGGTTAAAATATCACCCTTTATTTTGTATTTTGA

mRNA sequence

GGACTTAATTAGAGGGAGGAAGAAGGGCATTGGAGTAATTTGAAAAGAGAATTAAAATAGAAGCGTTGGTAAAGACTGAAAACCTAAGTCGCCAACTCAGGAGTGATCGCAAAAGCAAAAGTAAAAGCAAACACTCTCAACATCTACCGGCGGCGTCAGGGCTTTCAGTTTTGATCGCAAAGCTCTCTCTCTCTCTCTCTCCGATCCGAACATGTCGACCGTGCAACTCTCCACATCCTGCTTGATCAGACATGTAGCACCGAGGAAAACATCTGCTGCCCTTGTTCGGAGGCCATCGTCCTTGGGGTCCATTCGGAACGTATCCCAGGCATTTGGATTGAAATCTTCCTCATTCAGAGTCTCAGCAATGGCTTCTTACAAAGTGAAATTAATTGGACCGGATGGTGAAGAGAATGAGTTTGAGGCCCCTGATGATGCTTACATTCTTGACTCCGCCGAGAGTGCTGGATTGGATCTACCTTACTCTTGCAGGGCTGGGGCTTGCTCTACTTGTGCTGGTCAAGTAGTTTCCGGGGCAGTGGACCAGTCGGATGGATCGTTCTTGGACGAAAAGCAGATGGAGACGGGGTATGTCCTAACCTGCGTCGCATATCCACAATCCGACTGTGTCATCCACACACACAAGGAAGGTGATTTGTACTGATTTCTTTGTTGGTGTGCATTTCATCAGCTCAATCTGATTGGAACTCCAATCATGGGTTAGACTTTATGATTAGTCTTTGAGGTTGATATGTCTGTCTCTAGAATTGTGTTCGTACTACAGCAAATTTATGTTAATGCTTTAGTGTAAGGTGAAGCTTTGAACATTATTCATGAATAATGGATTTTCCTGTTGCCATGTATGGTAGGTGATGGAAATACCTACTTCTGATGGCTTTAATTTAATTAAGGTTAAAATATCACCCTTTATTTTGTATTTTGA

Coding sequence (CDS)

ATGTCGACCGTGCAACTCTCCACATCCTGCTTGATCAGACATGTAGCACCGAGGAAAACATCTGCTGCCCTTGTTCGGAGGCCATCGTCCTTGGGGTCCATTCGGAACGTATCCCAGGCATTTGGATTGAAATCTTCCTCATTCAGAGTCTCAGCAATGGCTTCTTACAAAGTGAAATTAATTGGACCGGATGGTGAAGAGAATGAGTTTGAGGCCCCTGATGATGCTTACATTCTTGACTCCGCCGAGAGTGCTGGATTGGATCTACCTTACTCTTGCAGGGCTGGGGCTTGCTCTACTTGTGCTGGTCAAGTAGTTTCCGGGGCAGTGGACCAGTCGGATGGATCGTTCTTGGACGAAAAGCAGATGGAGACGGGGTATGTCCTAACCTGCGTCGCATATCCACAATCCGACTGTGTCATCCACACACACAAGGAAGGTGATTTGTACTGA

Protein sequence

MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMASYKVKLIGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDEKQMETGYVLTCVAYPQSDCVIHTHKEGDLY

Homology

[Close]

BLAST of Sed0009285 vs. NCBI nr
Match: XP_022990479.1 (ferredoxin, root R-B2-like [Cucurbita maxima] >XP_022990480.1 ferredoxin, root R-B2-like [Cucurbita maxima])

HSP 1 Score: 261.9 bits (668), Expect = 3.3e-66
Identity = 131/150 (87.33%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMASYKVKL 60
           MSTV+L TSCLIR+  PRK S ALV+RPSSLGS RNVS+AFGLKSSSF+VSAMASYKVKL
Sbjct: 1   MSTVRLPTSCLIRNATPRK-SCALVQRPSSLGSFRNVSRAFGLKSSSFKVSAMASYKVKL 60

Query: 61  IGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDE 120
           IGP+GEENEFEAPDD YILDSAESAGLDLPYSCRAGACSTCAGQVVSG VDQ+DGSFLD+
Sbjct: 61  IGPNGEENEFEAPDDTYILDSAESAGLDLPYSCRAGACSTCAGQVVSGTVDQADGSFLDD 120

Query: 121 KQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           +QME GYVLTCVAYPQSDCVIHTHKEGDL+
Sbjct: 121 QQMEKGYVLTCVAYPQSDCVIHTHKEGDLF 149

[Close]

BLAST of Sed0009285 vs. NCBI nr
Match: XP_023533022.1 (ferredoxin, root R-B2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65
Identity = 129/150 (86.00%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMASYKVKL 60
           MSTV+L TSCLIR+  PRK S ALV+RPSSLGS R+VS+AFGLK+SSF+VSAMASYKVKL
Sbjct: 1   MSTVRLPTSCLIRNATPRK-SCALVQRPSSLGSFRSVSRAFGLKASSFKVSAMASYKVKL 60

Query: 61  IGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDE 120
           IGP+GEENEFEAPDD YILDSAESAGLDLPYSCRAGACSTCAGQVVSG VDQ+DGSFLD+
Sbjct: 61  IGPNGEENEFEAPDDTYILDSAESAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 120

Query: 121 KQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           +QME GYVLTCVAYPQSDCVIHTHKEGDL+
Sbjct: 121 QQMEKGYVLTCVAYPQSDCVIHTHKEGDLF 149

[Close]

BLAST of Sed0009285 vs. NCBI nr
Match: XP_022134447.1 (ferredoxin, root R-B2-like [Momordica charantia])

HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65
Identity = 127/150 (84.67%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMASYKVKL 60
           MST+ LSTSC+++   PR+ S ALV+RPSSLG+ RNVS+AFGLKSSSFRVSAMASYKVKL
Sbjct: 1   MSTISLSTSCMVKSATPRR-SYALVQRPSSLGAFRNVSRAFGLKSSSFRVSAMASYKVKL 60

Query: 61  IGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDE 120
           IGP+GEENEFEAPDDAYILDSAE+AGLDLPYSCRAGACSTCAGQ+VSG VDQSDGSFLD+
Sbjct: 61  IGPNGEENEFEAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQIVSGEVDQSDGSFLDD 120

Query: 121 KQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
            QME GY+LTCVAYPQSDCVIHTHKEGDLY
Sbjct: 121 NQMEKGYLLTCVAYPQSDCVIHTHKEGDLY 149

[Close]

BLAST of Sed0009285 vs. NCBI nr
Match: KAG7032935.1 (Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.7 bits (657), Expect = 6.3e-65
Identity = 129/150 (86.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMASYKVKL 60
           MSTV+L TSCLIR+  PRK S ALV+RPSSL S R+VS+AFGLKSSSF+VSAMASYKVKL
Sbjct: 10  MSTVRLPTSCLIRNATPRK-SCALVQRPSSLSSFRSVSRAFGLKSSSFKVSAMASYKVKL 69

Query: 61  IGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDE 120
           IGP+GEENEFEAPDD YILDSAESAGLDLPYSCRAGACSTCAGQVVSG VDQ+DGSFLD+
Sbjct: 70  IGPNGEENEFEAPDDTYILDSAESAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 129

Query: 121 KQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           +QME GYVLTCVAYPQSDCVIHTHKEGDL+
Sbjct: 130 QQMEKGYVLTCVAYPQSDCVIHTHKEGDLF 158

[Close]

BLAST of Sed0009285 vs. NCBI nr
Match: KAG6602256.1 (Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.7 bits (657), Expect = 6.3e-65
Identity = 129/150 (86.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMASYKVKL 60
           MSTV+L TSCLIR+  PRK S ALV+RPSSL S R+VS+AFGLKSSSF+VSAMASYKVKL
Sbjct: 382 MSTVRLPTSCLIRNATPRK-SCALVQRPSSLSSFRSVSRAFGLKSSSFKVSAMASYKVKL 441

Query: 61  IGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDE 120
           IGP+GEENEFEAPDD YILDSAESAGLDLPYSCRAGACSTCAGQVVSG VDQ+DGSFLD+
Sbjct: 442 IGPNGEENEFEAPDDTYILDSAESAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 501

Query: 121 KQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           +QME GYVLTCVAYPQSDCVIHTHKEGDL+
Sbjct: 502 QQMEKGYVLTCVAYPQSDCVIHTHKEGDLF 530

[Close]

BLAST of Sed0009285 vs. ExPASy Swiss-Prot
Match: P27788 (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 7.7e-50
Identity = 100/152 (65.79%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MSTVQLSTSC-LIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSS-SFRVSAMASYKV 60
           MST   +TSC L+ +V   + S   V+ PSSL     V++   LK+S    VSAMA YKV
Sbjct: 1   MSTSTFATSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKV 60

Query: 61  KLIGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFL 120
           KL+GP+GEE+EF+APDDAYILD+AE+AG++LPYSCRAGACSTCAG++ SG+VDQSDGSFL
Sbjct: 61  KLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFL 120

Query: 121 DEKQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           D+ Q E GYVLTCV+YP+SDCVIHTHKEGDLY
Sbjct: 121 DDGQQEEGYVLTCVSYPKSDCVIHTHKEGDLY 152

[Close]

BLAST of Sed0009285 vs. ExPASy Swiss-Prot
Match: Q9ZQG8 (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.0e-46
Identity = 95/155 (61.29%), Postives = 121/155 (78.06%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPS---SLGSIRNVSQAFGLKSS--SFRVSAMAS 60
           M+TV++S++ + + V   +T+  L+   S   S+GS + VS++FGLK S  S   +  A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 61  YKVKLIGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDG 120
           YKVKL+GPDG+E+EFE  DD YILD+AE AG+DLPYSCRAGACSTCAGQ+VSG VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 121 SFLDEKQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           SFL++  +E GYVLTCVAYPQSDCVIHTHKE +L+
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155

[Close]

BLAST of Sed0009285 vs. ExPASy Swiss-Prot
Match: P14937 (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-39
Identity = 74/97 (76.29%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 54  ASYKVKLIGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQS 113
           A YKVKLIGP+GEENEFE  DD +ILD+AE AG+DLPYSCRAGACSTCAGQ+V G VDQS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 114 DGSFLDEKQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           +GSFL++   E G+VLTCVAYPQSDCVIHTHKE +L+
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETELF 98

[Close]

BLAST of Sed0009285 vs. ExPASy Swiss-Prot
Match: P94044 (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-39
Identity = 84/155 (54.19%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 6   LSTSCLIRHVAPRK--------TSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMAS-- 65
           +ST+   R  APR         T+A      S  G  R  ++A G + SS  V++ A+  
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFAGHARQAARASGPRLSSRFVASAAAVL 60

Query: 66  YKVKLIGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDG 125
           +KVKL+GPDG E+EFEAPDD YIL++AE+AG++LP+SCRAG+CSTCAG++ +G VDQS+G
Sbjct: 61  HKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEG 120

Query: 126 SFLDEKQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           SFLD+ QM  GY+LTC++YP++DCVIHTHKE DLY
Sbjct: 121 SFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDLY 155

[Close]

BLAST of Sed0009285 vs. ExPASy Swiss-Prot
Match: P14936 (Ferredoxin, root R-B1 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.8e-39
Identity = 74/97 (76.29%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 54  ASYKVKLIGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQS 113
           A YKVKLIGPDG+ENEF+ PDD YILD+AE AG+DLPYSCRAGACSTCAG++  G VDQS
Sbjct: 2   AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQS 61

Query: 114 DGSFLDEKQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           DGSFL++   E GYVLTCVAYPQSD VIHTHKE +L+
Sbjct: 62  DGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEELF 98

[Close]

BLAST of Sed0009285 vs. ExPASy TrEMBL
Match: A0A6J1JQ79 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111487329 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 131/150 (87.33%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMASYKVKL 60
           MSTV+L TSCLIR+  PRK S ALV+RPSSLGS RNVS+AFGLKSSSF+VSAMASYKVKL
Sbjct: 1   MSTVRLPTSCLIRNATPRK-SCALVQRPSSLGSFRNVSRAFGLKSSSFKVSAMASYKVKL 60

Query: 61  IGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDE 120
           IGP+GEENEFEAPDD YILDSAESAGLDLPYSCRAGACSTCAGQVVSG VDQ+DGSFLD+
Sbjct: 61  IGPNGEENEFEAPDDTYILDSAESAGLDLPYSCRAGACSTCAGQVVSGTVDQADGSFLDD 120

Query: 121 KQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           +QME GYVLTCVAYPQSDCVIHTHKEGDL+
Sbjct: 121 QQMEKGYVLTCVAYPQSDCVIHTHKEGDLF 149

[Close]

BLAST of Sed0009285 vs. ExPASy TrEMBL
Match: A0A6J1BZM5 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111006691 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 127/150 (84.67%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMASYKVKL 60
           MST+ LSTSC+++   PR+ S ALV+RPSSLG+ RNVS+AFGLKSSSFRVSAMASYKVKL
Sbjct: 1   MSTISLSTSCMVKSATPRR-SYALVQRPSSLGAFRNVSRAFGLKSSSFRVSAMASYKVKL 60

Query: 61  IGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDE 120
           IGP+GEENEFEAPDDAYILDSAE+AGLDLPYSCRAGACSTCAGQ+VSG VDQSDGSFLD+
Sbjct: 61  IGPNGEENEFEAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQIVSGEVDQSDGSFLDD 120

Query: 121 KQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
            QME GY+LTCVAYPQSDCVIHTHKEGDLY
Sbjct: 121 NQMEKGYLLTCVAYPQSDCVIHTHKEGDLY 149

[Close]

BLAST of Sed0009285 vs. ExPASy TrEMBL
Match: A0A6J1E8R7 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111430444 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.0e-65
Identity = 129/150 (86.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMASYKVKL 60
           MSTV+L TSCLIR+  PRK S ALV+RPSSL S R+VS+AFGLKSSSF+VSAMASYKVKL
Sbjct: 1   MSTVRLPTSCLIRNATPRK-SCALVQRPSSLSSFRSVSRAFGLKSSSFKVSAMASYKVKL 60

Query: 61  IGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDE 120
           IGP+GEENEFEAPDD YILDSAESAGLDLPYSCRAGACSTCAGQVVSG VDQ+DGSFLD+
Sbjct: 61  IGPNGEENEFEAPDDTYILDSAESAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 120

Query: 121 KQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           +QME GYVLTCVAYPQSDCVIHTHKEGDL+
Sbjct: 121 QQMEKGYVLTCVAYPQSDCVIHTHKEGDLF 149

[Close]

BLAST of Sed0009285 vs. ExPASy TrEMBL
Match: A0A6J1K096 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111489026 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.3e-63
Identity = 126/151 (83.44%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMA-SYKVK 60
           MS + L TSCLI+   PR+ S ALV+RPSSLGS R+VS+AFGLKSSSF+V+AMA +YKVK
Sbjct: 1   MSAINLPTSCLIKSATPRR-SCALVQRPSSLGSFRSVSRAFGLKSSSFKVTAMATTYKVK 60

Query: 61  LIGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLD 120
           LIGP+GEENEFEAPDDAYILDSAE AGLDLPYSCRAGACSTCAGQVVSG VDQSDGSFLD
Sbjct: 61  LIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLD 120

Query: 121 EKQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           + QME GYVLTCVAYPQSDCVIHTHKEGDLY
Sbjct: 121 DNQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 150

[Close]

BLAST of Sed0009285 vs. ExPASy TrEMBL
Match: A0A6J1FEX9 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444864 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62
Identity = 125/151 (82.78%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPSSLGSIRNVSQAFGLKSSSFRVSAMA-SYKVK 60
           MS + L TSCLI+   PR+ S ALV+RPSSL S+R+VS+AFGLKSSSF+V+AMA +YKVK
Sbjct: 1   MSAINLPTSCLIKSATPRR-SCALVQRPSSLRSVRSVSRAFGLKSSSFKVTAMATTYKVK 60

Query: 61  LIGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLD 120
           LIGP+GEENEFEAPDDAYILDSAE AGLDLPYSCRAGACSTCAGQVVSG VDQSDGSFLD
Sbjct: 61  LIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLD 120

Query: 121 EKQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           + QME GYVLTCVAYPQSDCVIHTHKEGDLY
Sbjct: 121 DNQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 150

[Close]

BLAST of Sed0009285 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 187.6 bits (475), Expect = 7.4e-48
Identity = 95/155 (61.29%), Postives = 121/155 (78.06%), Query Frame = 0


Query: 1   MSTVQLSTSCLIRHVAPRKTSAALVRRPS---SLGSIRNVSQAFGLKSS--SFRVSAMAS 60
           M+TV++S++ + + V   +T+  L+   S   S+GS + VS++FGLK S  S   +  A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 61  YKVKLIGPDGEENEFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDG 120
           YKVKL+GPDG+E+EFE  DD YILD+AE AG+DLPYSCRAGACSTCAGQ+VSG VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 121 SFLDEKQMETGYVLTCVAYPQSDCVIHTHKEGDLY 151
           SFL++  +E GYVLTCVAYPQSDCVIHTHKE +L+
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155

[Close]

BLAST of Sed0009285 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 155.2 bits (391), Expect = 4.1e-38
Identity = 84/134 (62.69%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 21  SAALVRR---PSSLGSI--RNVSQAFGLKSSSF---RVSAMASYKVKLIGPDGEENEFEA 80
           S + +RR   P SL S+   N    FGLKSS+    RV+AMA+YKVK I P+GE+ E E 
Sbjct: 12  STSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGEQ-EVEC 71

Query: 81  PDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDEKQMETGYVLTCV 140
            +D Y+LD+AE AGLDLPYSCRAG+CS+CAG+VVSG++DQSD SFLD++QM  GYVLTCV
Sbjct: 72  EEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCV 131

Query: 141 AYPQSDCVIHTHKE 147
           AYP SD VI THKE
Sbjct: 132 AYPTSDVVIETHKE 144

[Close]

BLAST of Sed0009285 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-36
Identity = 78/127 (61.42%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 28  PSSLGSI--RNVSQAFGLKSSSF---RVSAMASYKVKLIGPDGEENEFEAPDDAYILDSA 87
           P SL S+   N    FGLKS +    RV+AMA+YKVK I P+G E E E  DD Y+LD+A
Sbjct: 22  PISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEG-ELEVECDDDVYVLDAA 81

Query: 88  ESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDEKQMETGYVLTCVAYPQSDCVIH 147
           E AG+DLPYSCRAG+CS+CAG+VVSG+VDQSD SFLD++Q+  G+VLTC AYP SD  I 
Sbjct: 82  EEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIE 141

Query: 148 THKEGDL 150
           THKE D+
Sbjct: 142 THKEEDI 147

[Close]

BLAST of Sed0009285 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-33
Identity = 68/117 (58.12%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 36  NVSQAFGLKSSS---FRVSAMASYKVKLIGPDGEENEFEAPDDAYILDSAESAGLDLPYS 95
           N +  FGL SS     +V A  S KVKLI P+GEE E E  +D  IL+SAE+AGL+LPYS
Sbjct: 31  NNTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYS 90

Query: 96  CRAGACSTCAGQVVSGAVDQSDGSFLDEKQMETGYVLTCVAYPQSDCVIHTHKEGDL 150
           CR+G C TC G++VSG VDQS GSFL+E+Q++ GY+LTC+A P  DCV++THK+ DL
Sbjct: 91  CRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147

[Close]

BLAST of Sed0009285 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 9.8e-16
Identity = 53/141 (37.59%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 17  PRKTSAALVRRPSSLGS----IRNVSQAFGLKSSSF----RVSAMASYKVKLIGPDGEEN 76
           P +TS   + +P    S    +RN + +      +F    R+ A A YKV ++  DG+  
Sbjct: 7   PTQTSTISLPKPYLSNSFSFPLRNATLSTTTNRRNFLTTGRIIARA-YKV-VVEHDGKTT 66

Query: 77  EFEAPDDAYILDSAESAGLDLPYSCRAGACSTCAGQVVSGAVDQSDGSFLDEKQMETGYV 136
           E E   D  IL  A  +GLD+PY C  G C TC  ++V+G VDQS G  L +  +E GY 
Sbjct: 67  ELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLSDDVVERGYT 126

Query: 137 LTCVAYPQSDCVIHTHKEGDL 150
           L C +YP SDC I    E +L
Sbjct: 127 LLCASYPTSDCHIKMIPEEEL 144

The following BLAST results are available for this feature:

BLAST of Sed0009285 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990479.1	3.3e-66	87.33	ferredoxin, root R-B2-like [Cucurbita maxima] >XP_022990480.1 ferredoxin, root R...	[more]
XP_023533022.1	2.8e-65	86.00	ferredoxin, root R-B2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022134447.1	2.8e-65	84.67	ferredoxin, root R-B2-like [Momordica charantia]	[more]
KAG7032935.1	6.3e-65	86.00	Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6602256.1	6.3e-65	86.00	Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0009285 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27788	7.7e-50	65.79	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
Q9ZQG8	1.0e-46	61.29	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
P14937	1.6e-39	76.29	Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]
P94044	2.1e-39	54.19	Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1	[more]
P14936	2.8e-39	76.29	Ferredoxin, root R-B1 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]

BLAST of Sed0009285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQ79	1.6e-66	87.33	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111487329 PE=3 SV=1	[more]
A0A6J1BZM5	1.4e-65	84.67	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111006691 PE=3 SV=1	[more]
A0A6J1E8R7	3.0e-65	86.00	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111430444 PE=3 SV=1	[more]
A0A6J1K096	8.3e-63	83.44	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111489026 PE=3 SV=1	[more]
A0A6J1FEX9	3.1e-62	82.78	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444864 PE=3 SV=1	[more]

BLAST of Sed0009285 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27510.1	7.4e-48	61.29	ferredoxin 3	[more]
AT1G10960.1	4.1e-38	62.69	ferredoxin 1	[more]
AT1G60950.1	2.9e-36	61.42	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	1.8e-33	58.12	ferredoxin 4	[more]
AT4G14890.1	9.8e-16	37.59	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 53..150 e-value: 6.7E-36 score: 124.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 63..136 e-value: 1.2E-19 score: 70.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 56..147 score: 12.931115
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 58..142 e-value: 2.56703E-31 score: 105.555
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 54..150 e-value: 2.5E-49 score: 163.0
None	No IPR available	PANTHER	PTHR43112:SF31	FERREDOXIN	coord: 1..150
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 1..150
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 93..101
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 40..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009285.1	Sed0009285.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding