Sed0009283 (gene) Chayote v1

Overview


Name	Sed0009283
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein 230
Location	LG10: 7604523 .. 7607964 (-)
RNA-Seq Expression	Sed0009283
Synteny	Sed0009283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCTAGAAGAAATGTTTGTTACAACTCCCTTGCCACTGATGATAAGGATCTTGATTATGATGGAAGTCAGTATGACCCTCGTTTTTACTATACACCAAAAGCTTTTGATAAGATCCCGTGGAAATCCATTGCTCTGGCAATGTTCCTTTTATCTCTTGGATCATTGCTTCTCTTTCTTTCGTATTTCGTATTAACGGGGCACAAGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGGTTTCTGTAACAGCCCAGTTTCCTATTCCAGTTTTTGAGGTGCCTTCGGGTCAAGATTCAGTTGTTTGGTTGGGTCATTAGAGCGGTTTTGACCCTTGGGGGTATTTTGGTCTTTTGGCTCCCCGGGCAGAATTTGTGGTTTTCAGGGCTTCGAGGTAGCTCCTGCCTTTGTCGAGGCTTGTTTGTTGTTGGCTGCGAGTCCCGAGGTGTTTGGGCTAGTCGGTTGGATGCTCGGTTGTGGTTTGGGCTTTGGCAAAGTGATGGTTGGTTGAGTGCTTCCTTTGGGATTCGAGCCCGAGCCCTTATTGTTGATTTGGGAGTTGGATTTAAGTGAGTTTTATTTATTGGAAAAGGTTGCTTCAGTCGGGTCTCGAAGGAGGAAGCCGGGAAATGGGATTTTGAGGTTTTAAAAAGTGGATAAGGTTTGAATTGGATAAAATCCCATTTATTTCCTTTTATTCCCATTTTTCTTTTATTTTCCCATTTTCTTTTCTAAATCCCCATTTTCTCTCTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCGAGCCCTCACCCTAGCCCGAGCCAGGCCCTCCTCGGCTCGCCCACCTAGCCCGCAGAGCGGATCATCGACCCACCTCGGCGCTCGCTCGCGATGATGCTGCGTCGCCCGAGCCCACCCCCTACGCGCCCTGTGTCGCCAGCCCTAGCCCTTCACCCGCGTCGCATAGTGTCGCCCAGCCAGGTCGCGTCGCCCGTGTCGTCCGCGCCCGTGTCGGCCAGATCGCGCGTCCTGTAGCCCGTGGCGTCATGTCGCTCGCGCCCGCGCGCTGTCCCTGTGCCGAGCCGCTCCGCGCGCCAGCTCCCGCGCCCGCGTGCCCCTGTGTCGCTCGCGGGCCCATCCGCGCGCAGCCCAGCGCTCCAGTGCCCAGCCCTGCGCCCCTCAGCGCCCAACTGCTGCCTCGCCCGTGCAGCCAGCTCGTTCGCGTGTCAGCCGCGCCTCGTGAGTTGCTCCCGAGCCGAGCCCTATTTATTTTATTATATTTAGGCCTATTTTTATGATTATTGATGTGTTTGTTTGGCTCGCTATAGGTTGCTCGGGTTCGATCGTAGTTAGGTTTGTTGTGTGTTTTTGCCTTCCGACCAAGTAAGGATTTCTTACCGGAGTTGTGTGGGCCCTACGATATATTATGTGATTGTTGATTATATGCTTGTTTGTGTTTATTGACATGTTTAGTGATAAGTGATCTATTCTGAATTCCCGACTGGCATGATTTCCTATATTGTTTCTCATGTTAGTCCATGCTAGGTTGTTCCTTTCTGGCATGCTCGTATCTGTTCTTGCTTCGTAGTATCATGCTAGGTTCGTTGTATTCTTATTGAGCACGTATTGGATTGATTGGATTGTTTGCTGATTGCTATGACAAGTTAGAGTTCAGGTAGATAGCATCATCCGGGTCGGGTGCATAACGAACCTTGCATCCCCGACAGGGACGTACGAGATGGAGCTCCGTCCCTGATCCCGTTAGGGACTAGCTAACCCTAACGGCGGGCCCCACAATCTTGGGTGAGGGTGGCAGACTGTTAAATGCCCCAACGGTCGAGATGATGACTTGGCATTGCCTTGTCCCCGACAGCCGGCAATTCCTCAGCGTGTTTCGGCGGTAGCCCTTGAGTTGCCACTTGATAGGGCAAGGACGGTTTCCTGGTGTAAGCCTACCACGACCCGTGCCTTAGCCTCAGGTGCGGTGGTTCAGGCTGACATAGTTCACGTGTCCAGGTCTCACACCCCTATGTCGGTGACACCGATCCGGAGATTTAGTTAGGCGTGGTGATTGGACATGGGGCTTGCCACTAGATCCGGCACCCCATAGTCTGCGCGAAGCGCGTGGCGCGCGAACGCTCATTATAGCGCCGACCGGAGAGCTCCTCGGGATCTTGAGCTAGTGCACCTTTCGTCGACAGTAGACAGGCTGAGGCCGAGACTTGTTTCTCGTATAGGGCTTATTGTCTGGTGAGTTATTTCCGGACTAAGACCCTGAGTTGGCATCCGAGGCCCAAGTGTGGGCTAAGCTATGTGCTCTATTCTGTGTTTATATTCATAGCTTGCATACCTTTCTGCTAGATGACCATGTGTATCGTATTGTACCCCGGTTGGGGATTCTTACTGAGTAATTCGTTACTCACCCTTATTATGTGGTTTTCCATAGGTAGCCATGGTGCGAGACAGGATGGCTGGAGGAGGAGCTGTGATCATGGAAACCCGTTGTTCAACTCTGAGTTTTATGTTTATGATTTAAATGTCCTCTGAATGCATGTAGTTGGGCACGGAGCCCTAGGGTGTTTACTGAATGTATTTCCGGATTCTAGCATTGTTGTAACTATTGTAAAGTTGTATGTTTTAAATAAATCTCTGATCAGAGTGAGTTTTGTAAATGTATTTGCCTTGGAACAGGTGCTTGGAAACAGGGACATGTTCCAGGAATTGATGTTGATTTTTAAATGGATGTTTTATGTTTTAGTTTTTACTTAGAATCCGAACACCATCTTGCGAATTTTCTGTAGATTTGAATGCATGCATTGAGGTAACGGTCTATTTTAGAACCCTTTCGGGTCGCGTCGTTACAGTTTCTTACCTTATGGTCTATTGACTGACTAATGGATTCTGTTTTTTAAACGATTCTGATGATCTAATGCAATGTTGTGAGTTAATAGTGTTGTGCGTCCACCCTTAAGTTACTGTCATTTGGGTTGGCCTAGCAATCAAATAAAGTGCTTATAAACAACAAAGTTCTTAGAGGTTCTGTGATCTGTGGTGATCACCAAATGTAGTAAGGTTAGGTAATTATCCCGTGAGAATAGTTGAGGTGTGATATTAAAAAATAAATTATTTGGTTCGTGCTTCGCATGCAACTATGGTACATCTTTGTCATTCTTAGAATTTTGGTTATTATTTATTTTCTTTCTTTTCTTTCACACAATGCCAAATGTATCCGAAGTCTACAATGGAGAGTAAATCAAAGTTATGTTATTATTGATTGATTGAATGACAATTGTGGAAGTGCTGTTGACTCATCCTGTTTTAGAAGGATTATAATCTGAACAACTTTTGCTTTATCGGCGCAGGCTTTTACGACACGGGATTGCTTATTATGCATGGAGGAGTGCCAACGGATATCGCTTTGCTTCCATTCCTGATTACTAG

mRNA sequence

ATGGAATCTAGAAGAAATGTTTGTTACAACTCCCTTGCCACTGATGATAAGGATCTTGATTATGATGGAAGTCAGTATGACCCTCGTTTTTACTATACACCAAAAGCTTTTGATAAGATCCCGTGGAAATCCATTGCTCTGGCAATGTTCCTTTTATCTCTTGGATCATTGCTTCTCTTTCTTTCGTATTTCGTATTAACGGGGCACAAGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGGTTTCTGTAACAGCCCAGCTTTTACGACACGGGATTGCTTATTATGCATGGAGGAGTGCCAACGGATATCGCTTTGCTTCCATTCCTGATTACTAG

Coding sequence (CDS)

ATGGAATCTAGAAGAAATGTTTGTTACAACTCCCTTGCCACTGATGATAAGGATCTTGATTATGATGGAAGTCAGTATGACCCTCGTTTTTACTATACACCAAAAGCTTTTGATAAGATCCCGTGGAAATCCATTGCTCTGGCAATGTTCCTTTTATCTCTTGGATCATTGCTTCTCTTTCTTTCGTATTTCGTATTAACGGGGCACAAGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGGTTTCTGTAACAGCCCAGCTTTTACGACACGGGATTGCTTATTATGCATGGAGGAGTGCCAACGGATATCGCTTTGCTTCCATTCCTGATTACTAG

Protein sequence

MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALGVSVTAQLLRHGIAYYAWRSANGYRFASIPDY

Homology

[Close]

BLAST of Sed0009283 vs. NCBI nr
Match: XP_023521905.1 (transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-43
Identity = 94/116 (81.03%), Postives = 99/116 (85.34%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRRNV Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGSLLLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Sed0009283 vs. NCBI nr
Match: XP_022961740.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembrane protein 230-like [Cucurbita moschata] >KAG6602515.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033189.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183.7 bits (465), Expect = 8.8e-43
Identity = 93/116 (80.17%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRRNV Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Sed0009283 vs. NCBI nr
Match: XP_022990725.1 (transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022990727.1 transmembrane protein 230-like [Cucurbita maxima])

HSP 1 Score: 180.3 bits (456), Expect = 9.7e-42
Identity = 92/116 (79.31%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRR+V Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGSLLLF
Sbjct: 1   MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGY FASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYCFASIPDY 116

[Close]

BLAST of Sed0009283 vs. NCBI nr
Match: XP_022939930.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022939931.1 transmembrane protein 230-like [Cucurbita moschata] >XP_022993688.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993689.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993690.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023549544.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023549545.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6578563.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-41
Identity = 91/116 (78.45%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRRNV Y+SL+TDD DLD DG+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Sed0009283 vs. NCBI nr
Match: XP_038889462.1 (transmembrane protein 230 [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 3.7e-41
Identity = 92/116 (79.31%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRRNV Y SLATDD DLD +GS YDPRFYYTPKAFDKIPWKSIALA+FLL LG LLLF
Sbjct: 1   MASRRNVRYRSLATDDNDLDSEGSPYDPRFYYTPKAFDKIPWKSIALAIFLLVLGILLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Sed0009283 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.0e-05
Identity = 38/112 (33.93%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 7   VCYNSLA-TDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFV 66
           V Y+ LA TDD  +D    +  P          KIP+K+IALA+ L  +G+ L+ +   +
Sbjct: 17  VKYSKLASTDDGYIDLQFKKSPP----------KIPYKAIALAVVLFMIGTFLIIIGALL 76

Query: 67  LTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY 116
           L G+   G   +A  +L +G+ V      H  IAYYA +   GY +  IPD+
Sbjct: 77  LAGYISKGGTDRAIPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Sed0009283 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.6e-05
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 0


Query: 22  DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGL 81
           D    D +F  TP    KIP+K+IALA  L  +G+ L+ +   +L+G+   G   +A  +
Sbjct: 26  DDGYIDLQFKKTP---PKIPYKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPV 85

Query: 82  LALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY 116
           L +G+ V      H  IAYYA +   GY +  IPD+
Sbjct: 86  LIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Sed0009283 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-05
Identity = 38/112 (33.93%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 7   VCYNSLA-TDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFV 66
           V Y+ LA TDD  +D    +  P          KIP+K+IALA  L  +G+ L+ +   +
Sbjct: 17  VKYSRLASTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY 116
           L+G+   G   +A  +L +G+ V      H  IAYYA +   GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Sed0009283 vs. ExPASy Swiss-Prot
Match: Q5R8X3 (Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-05
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 0


Query: 22  DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGL 81
           D    D +F  TP    KIP+K+IALA  L  +G+ L+ +   +L+G+   G   +A  +
Sbjct: 26  DDGYIDLQFKKTP---PKIPYKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPV 85

Query: 82  LALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY 116
           L +G+ V      H  IAYYA +   GY +  IPD+
Sbjct: 86  LIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Sed0009283 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 7.6e-05
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 0


Query: 22  DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGL 81
           D    D +F  +P    KIP+K+IALA  L  +G+ L+ +   +L+G+   G   +A  +
Sbjct: 26  DDGYIDLQFKKSP---PKIPYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPV 85

Query: 82  LALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY 116
           L +G+ V      H  IAYYA +   GY +  IPD+
Sbjct: 86  LIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Sed0009283 vs. ExPASy TrEMBL
Match: A0A6J1HAY7 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.3e-43
Identity = 93/116 (80.17%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRRNV Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Sed0009283 vs. ExPASy TrEMBL
Match: A0A6J1JQW3 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.7e-42
Identity = 92/116 (79.31%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRR+V Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGSLLLF
Sbjct: 1   MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGY FASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYCFASIPDY 116

[Close]

BLAST of Sed0009283 vs. ExPASy TrEMBL
Match: A0A6J1K312 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.2e-42
Identity = 91/116 (78.45%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRRNV Y+SL+TDD DLD DG+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Sed0009283 vs. ExPASy TrEMBL
Match: A0A6J1FP54 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111445649 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.2e-42
Identity = 91/116 (78.45%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRRNV Y+SL+TDD DLD DG+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Sed0009283 vs. ExPASy TrEMBL
Match: A0A1S3C9X7 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.0e-41
Identity = 89/116 (76.72%), Postives = 99/116 (85.34%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLF 60
           M SRRN+ Y+SLA+DD D+D +GS++DPRFYYTPKAFDKIPWKSIALA+FLL LGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYYAWRSANGYRFASIPDY 116
           LSYFVLTGH AGEKSQAYGLLALG ++         IAYYAWR ANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Sed0009283 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 122.1 bits (305), Expect = 2.9e-28
Identity = 64/121 (52.89%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 1   MESRRNVCYNSLATDDKDLDY-----DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLG 60
           M SRR+V Y  L  D+ D  Y     +   +DPRF Y+PKAFD++PWKSIALA+FLL LG
Sbjct: 1   MASRRSVRYAQLPGDEDDEGYGNGVGERRDFDPRFDYSPKAFDRVPWKSIALAVFLLFLG 60

Query: 61  SLLLFLSYFVLTGHKAGEKSQAYGLLALGV-SVTAQLLRHGIAYYAWRSANGYRFASIPD 116
            LLL LS+F+  GH  G+ SQ Y LL LG+ +         IAYY+WR A GYRFA+IP 
Sbjct: 61  CLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRIAYYSWRGAEGYRFAAIPS 120

The following BLAST results are available for this feature:

BLAST of Sed0009283 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521905.1	3.0e-43	81.03	transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 tran...	[more]
XP_022961740.1	8.8e-43	80.17	transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembran...	[more]
XP_022990725.1	9.7e-42	79.31	transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane ...	[more]
XP_022939930.1	1.3e-41	78.45	transmembrane protein 230-like [Cucurbita moschata] >XP_022939931.1 transmembran...	[more]
XP_038889462.1	3.7e-41	79.31	transmembrane protein 230 [Benincasa hispida]	[more]

BLAST of Sed0009283 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLH4	2.0e-05	33.93	Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1	[more]
Q96A57	2.6e-05	35.42	Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1	[more]
Q8CIB6	4.4e-05	33.93	Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1	[more]
Q5R8X3	4.4e-05	35.42	Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1	[more]
Q5BJP5	7.6e-05	34.38	Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1	[more]

BLAST of Sed0009283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAY7	4.3e-43	80.17	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=...	[more]
A0A6J1JQW3	4.7e-42	79.31	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1	[more]
A0A6J1K312	6.2e-42	78.45	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1	[more]
A0A6J1FP54	6.2e-42	78.45	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111445649 PE=3 SV=...	[more]
A0A1S3C9X7	4.0e-41	76.72	Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1	[more]

BLAST of Sed0009283 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29170.1	2.9e-28	52.89	Eukaryotic protein of unknown function (DUF872)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Transmembrane protein 230/134	PFAM	PF05915	DUF872	coord: 40..115 e-value: 1.5E-13 score: 50.9
None	No IPR available	PANTHER	PTHR15664:SF0	TRANSMEMBRANE PROTEIN 230	coord: 1..115
IPR044234	Transmembrane protein 230	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009283.1	Sed0009283.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005776	autophagosome
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane