Sed0009245 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCTCTCAAACTTCAATGGAACCGGCGTAGGATTCGGTACAATACATTCAATAATCTTGATATTTCGTACATTTTTTTATTTGTTCTTGGACTGATTCTCGCTCTTATTTTCTTCCTATGAAGGTTTTGGTGTCGGTTGCGGGTTCGGCGTAGGATGGGGTTTTGGAGGTATGTAGCGTCTTAACCCACTTTTTATCCATCGTTTTTTGCCCTTCAACTTGGGTTCTTTCGTTTGCCTGCTATACGTTGTGAGATTTTTCCTGAATTTCTAAAATTATTTTATCAGGCATTTTGTAGATCATCAGATACTGCATTCTTTTTTTTTTAATTAGATTGGATTTCAATGTATTAATTGGGTGAAACCTGCTAAAATGAATTGTGAGAATGTCATGAAATGGATGCCACAGAACTCTGAGCGATTGGAGTTATCAATTGAAAAAGATTTGGCTTATTTGAAATGATTTGGCTTTTTCTTGTTTAATCTGTAGTTGGTTCTTGATGTTGTCTCTGTCTCTATTATTTTGAGAGACCTATGTGCACGCTTCTTGAATTGGTTAAAGCTGATCTATTGGCGTTAGTGATCTTAAAATGTTAAACCATCATTGATGAATGTAGTGATGTGAGCCCACAAATATTGGAGGAGACAACATTATAAAAACGGTCTCCAATCAAGAGAAATGTAGCTTCAAGAATAATTACAAAAAAGTTTAGAAACTGAAGCATAGAGAGAAACATAGATTCTAATGAGACACCACACATCAGGCCAAGAATGATCAACGCCTCTAAAAATTATATTGCTTCTTTTTCTCAAAAGCCCCACAAAATGGAACACACGTTAGGTTCACTCCATAGTGACCATCTAACAAGAAATTAATTTTTTACGAGTTTCTTTGACAACTAAATGATAGTTTCTTGACTGCCCTTACCTCATTTGCATCAGTGTGTATTTGTGAGTGAAATCTACCATTTACATTACGCTAAAGAAGTAAATAAACATGTTGGCTAAATGGCTCATAATTTTGTTCTTGACTGCCTCTAATTTGAATGTACTGGCATCTTGTGAATACCACCAACTGTTGAAAGAAATCAGACAGTTGTTCCTCAGGTTTAGAAATAAGGGTGTTTGCTGCCCTGGATACCTAAAGAGTACTCTTTTGTTTATTATTATTATTATTATTATTATTATTATATTTTGTAAAATCTTGACGGGCTAGAATCTAAGGTTTGTGCCTCTGTTGTAAGGTGTAACTTATCTTATTTTTCTCCTTTGTTGTTGTTGGGAATACAAAGAAAGCAGTGATCCCACATTGGTTAAATAAGAGGTAGATCATGGGTTTATTAGGGGGGATAAACATCTCCATTGGTATAAGACCTTTTGGATGAAACCAAAAATAAAGTCATGAGGGCTTATGCTCAAAAGTGGATAATATTATATCAACGTGGAGATTCGGGTGGGTTTGTCGTCCTTTTAACGGCTGTTTAGGATATTAAAAGAGTGATACTTTATGTTGGTATCATTCTTTATTGGAAAGTTTGTATTTCATACTTGAGGCATATTTAAAAAGTAAAAATCAGATTTTATACTTGAGGATTTTAGAGTTAGAAGAGTCTGAAACTGTATGTTGGTATCGTTCTTTATTGTAAGGTTTGTAGTTCACAAGTTTCAATGGAAGATTAGGTTTTGATGATTATATTTAAGTTTAGCTTTAATGTAAAAATCCGTAACTGAACTGTCTCATGACAAATATGAATATAAGTAATTAAACTGGATTTTGATTGCCACATAGAAACCTTATAAGTTATGGCCCTGAATATAACCTCTAAGATTCAATTGTATATTCCATTATTTCCCTTTAAACTTCCCAGGCACATATTATTCTTTAACATGGCAGAAGTAGCATCTCTTCCATTGCATGCCTCACCCGAACAAAAATGTTAATTTTGCAGGAATGCCTTTGAACTTCTTGGGCCTTGGTGCGGGTAACCAGCTGATACCTTGAACACAATTTTTCCTTCAATGCATTCATTGATCTGATTGCGCTGAGTTATCATATTTTTTAATCCCTTTTATGTAGGGGGTGGATGTGGCGTTGGATTGGGACTTGGATGGGGCTTCGGCACAGCTTTCGGGAGCAAGTATAGGTCCTCCAGGATGATATTTCAGGGAATGGAATTTGAGAACAAGGATCAAAATCAAAATTATGTTGGCAAGGACTCAAAAGATGTAACCCGAAAGTCCGGAGGAGATTGA ATGGTTCTCTCAAACTTCAATGGAACCGGCGTAGGATTCGGTTTTGGTGTCGGTTGCGGGTTCGGCGTAGGATGGGGTTTTGGAGGAATGCCTTTGAACTTCTTGGGCCTTGGTGCGGGGGGTGGATGTGGCGTTGGATTGGGACTTGGATGGGGCTTCGGCACAGCTTTCGGGAGCAAGTATAGGTCCTCCAGGATGATATTTCAGGGAATGGAATTTGAGAACAAGGATCAAAATCAAAATTATGTTGGCAAGGACTCAAAAGATGTAACCCGAAAGTCCGGAGGAGATTGA ATGGTTCTCTCAAACTTCAATGGAACCGGCGTAGGATTCGGTTTTGGTGTCGGTTGCGGGTTCGGCGTAGGATGGGGTTTTGGAGGAATGCCTTTGAACTTCTTGGGCCTTGGTGCGGGGGGTGGATGTGGCGTTGGATTGGGACTTGGATGGGGCTTCGGCACAGCTTTCGGGAGCAAGTATAGGTCCTCCAGGATGATATTTCAGGGAATGGAATTTGAGAACAAGGATCAAAATCAAAATTATGTTGGCAAGGACTCAAAAGATGTAACCCGAAAGTCCGGAGGAGATTGA MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKSGGD Homology
BLAST of Sed0009245 vs. NCBI nr
Match: XP_004141282.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 168.3 bits (425), Expect = 3.2e-38 Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Sed0009245 vs. NCBI nr
Match: XP_022937244.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita moschata] >XP_022937245.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita moschata] >XP_022937246.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita moschata] >XP_023535926.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >KAG6591411.1 hypothetical protein SDJN03_13757, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 165.6 bits (418), Expect = 2.1e-37 Identity = 81/94 (86.17%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of Sed0009245 vs. NCBI nr
Match: XP_022977146.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita maxima] >XP_022977147.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita maxima] >XP_022977148.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita maxima] >XP_022977149.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 165.2 bits (417), Expect = 2.7e-37 Identity = 81/94 (86.17%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Sed0009245 vs. NCBI nr
Match: XP_008452624.1 (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 164.9 bits (416), Expect = 3.6e-37 Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of Sed0009245 vs. NCBI nr
Match: XP_022159826.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X1 [Momordica charantia]) HSP 1 Score: 164.1 bits (414), Expect = 6.1e-37 Identity = 82/94 (87.23%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Sed0009245 vs. ExPASy Swiss-Prot
Match: Q8VY77 (Protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TGD5 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 8.9e-31 Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of Sed0009245 vs. ExPASy TrEMBL
Match: A0A0A0L0F8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642340 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38 Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Sed0009245 vs. ExPASy TrEMBL
Match: A0A6J1F9U6 (protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443591 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.0e-37 Identity = 81/94 (86.17%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of Sed0009245 vs. ExPASy TrEMBL
Match: A0A6J1IHM9 (protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477300 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37 Identity = 81/94 (86.17%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Sed0009245 vs. ExPASy TrEMBL
Match: A0A1S3BVF8 (protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493589 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37 Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of Sed0009245 vs. ExPASy TrEMBL
Match: A0A6J1E543 (protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026129 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 3.0e-37 Identity = 82/94 (87.23%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Sed0009245 vs. TAIR 10
Match: AT1G27695.1 (glycine-rich protein ) HSP 1 Score: 134.0 bits (336), Expect = 6.3e-32 Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of Sed0009245 vs. TAIR 10
Match: AT1G27695.2 (glycine-rich protein ) HSP 1 Score: 134.0 bits (336), Expect = 6.3e-32 Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|