Sed0009244 (gene) Chayote v1

Overview


Name	Sed0009244
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box protein
Location	LG04: 11193364 .. 11196728 (-)
RNA-Seq Expression	Sed0009244
Synteny	Sed0009244

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCATTTCTTGAAATTCAAATCAAAGATCGAGTTGTAATTTTCAATCCCTTCTTCTTCACGAATTTGGCGGAGTTTTTCAATTCGCTCGATTCGCAGGTTTGTTTCGATTTCGTCCATTTCCATTTCTCTGTTTCGTTTCGATTCGATTCTCGCTGCATTTCTTGAATGTTTCTGATTTGCAATACATTCATGTGTTTTAGGGTTTACTTTTAGCATCTTTTTCGAGGTGGGATTTTCTTTTTTCCGCCGTTCTTGATGTTTCTGATGAATTTCACTTGTAGTTTGAATGTTCAAGAACTCATTTACGTGTTTGAATTTTTCCGTGGCAGGTTGTTTCTTTTTTAATTATTGATGTTTAGGGTTTATTGAAGTAGTTGCAAAGGCGTTTAGGGTTTTTGTTTTTTGGTGAATGGGGAAAGTGAGTGAAGGGATGGGGAAGGTGTTTTCGGATGGTAGGGAGTCGAAATTGAAGAGGGGAAGGCGGCCGCAGCTGCGGTGCTCTAAGGGCCCGGTTGCTAAATCTTGTACTGATCTTGGGAAGAAAAGGGTGGCTGTATTGGATGCTGTAAATACAAAGAGGAACAATGTGGTGTTTGAGGATACGGCTTCTGATACAAGTCCTTTGATGTTGTCCCCTGTGAAATTGGTGATGCATATCAATCATATTGGCACCCCAAGAACTCCTCGAGTCGAAGACTGCGAATCGGAGTCACGATTGGAATCTCTGCCTATAGATCTATTGGTATTGTTGCTATACATCTTATTATTTTTTTTATTCCTAGACAAAAACGTGTTAATCTTGAAGCTATGTCAATTGCACTAAATCAAACATTTTCCGTCTTTATTTTCAAAATGTAAGAATTTTCTGTTGCCTTTTGCTTATACTCTAAGAAGCACGGACACGAGATATGGATACGACATGACACGGACATGTAGATACACCATTCGGATACGTCGTGTTATCGATCATTTGAAACAAACAAGTTTTAAATGAGGTGTCCGCAAAATGTCTGAAATTAAAAATAATAATAATGAAGGAGGACACGGAATTTCGAGTGCCGGACATGTGTCCGAAGAGTGTCGGGAGGTATCGTTGTTGGACACGTTTTCGATACAGATACTTTGTCAAAATAGAAGTGTCTGTGCTTCCTAGCTTATACTAGCCTATCATTTGAGCTGTTACTTTTGAAACGTTTGTTCGTTTAATAGTTGATGGCCTTTTAGTTTTGTTCTAGTGTTAAGCAGATGTCTCTTATCTTCAAAGTGAAGAGTCGGAATAAATTTCTTGCGTGCCATCTCATTATGTGAAGATTATGTAAGAACAGAGTAGCCATGACCTACTTTTAGTAAAAATGACAAAACCTTTTCCTGTGCTAGTCGGCAACTTAAAGCTAAAACTCTAGCAACCATGGTGACTTGCCTTAGTGATGAAATAAGGGTCTCATAAGTGTTTATAGGTTAGGCATTCATTCTATGGTGGCTACCTATTTAAGAAGTTCCCTAGGGGGGGTGCTATGGTCAAAGTCTTGAACTTTGAAGGTGTGTTCCCTTCAAGGTTTCAGGTTCGAAACTCACTTGTGACATTAATTTGTAGACACCTCCTGTGTCTTCATTCCTTTGATGTCTCCTAATTTCTGGCCTAGGGACGAGCGTGGTTATCCTGAATATAGTGGTGCGAAGCTCCGATTTCTCGGTTTCTATAAAAAAAACTACAAGTTACCTTGGCATACAAATGTTGTAGGTGGTTTGTCTTGTGAGATTATTCAAGATGTGCGTAAGCTAACCTATATACTCGCGATATAAAAAAAAATTATCAACTTATAAAAGCCAAGTTCTTTTGATCTGTGAATAAAAAAATTCTTTGATCCGTGAATACAAAAAGTTCTTTGATCTTGATGGAGATGCTTCACTATGCATAGAAATTTGATGCACTCATAATGATTAATTTCTTAATATTTTTTTACATCCAAATGTTGTATGATTAGGCCGATGTCCCATGAGAATAGTTGAGATGCGTGTACACTAGACCAAACACTCACGGATATAAATAATAATAATAAAATAATGACCTGATCTGATATCTGTGTCTGTACTATTTGAACATGATTTGATAAGAAATGAGATTTGCACTGTAATGGATATTAATCTTAAGATCTGTTTTGCTGCTGATCTAATGTTTTCAATTTATAACTCGAAGGTGAAAGTACTTTGCCATTTACACCACGACCAACTGAAGGCTGTGTTCCATGTCTCTCGACGGATCATAAAGGCTGTAAGTCTTAGTCTCTGTCTGCCAGAAATTCATCACAATCACATCTCTTGGAGGTTGATGACCCTTTTTCTTAAACAGGCTTTGATGGCTAGACAATTCTACTTTAACTACACAACTCCAGATCGATCCAGACAGGAGATGTTGAAATCAACCACCCCTCGACCCGCTGAACAGCTTCCCTTACTAAGGTTGATATTCTTTGTGTTCATTTAAACATTTACTTTCATTTGTTCTATAATTTTACTACGATTTTGGGCGGTTAAGTCATATGCCTTTTGTTGAATTATGTTAAACCACCAATCAATCCAAAAGCCTAAGCTGATGGATTGGGGTAAATTTAATTATATCAACCAACACTCCCCCTCACTTGTGGGCTTTGAAATTTGAGAAATGCCCTACAAGTGGACTTTTAATTTTAATTGGGGATGAAATGACTTGGCAGGGATTCGAACTCATGACCTTCTGCTCTGATACCATGTTGAATTATGTTAAACCACCAATCAATCCAAAAGCCTAAGCTGATGGATTGGGGTAAATTTAATTATATCAACCAACACCTTTCACCTAGAGTTAAGAGTTCAAATTCTCGCGTTCATATTAATCTGACTTGAAACAATGATGCACAGCAAGGGAGATGGCAAAGGCTTGTCATTGCCGAGCCCTCGCACTCCCAAAGCACCAAGACATGGCCCTCGTCCACCATCTCGTCTCAAAGTTTCAGAGACGAGGCAGGTTGCTGCTGTTCTGTTTCAAGAATCAGCCTTTCCTCCAAAATGCACGGTTCCATCTGTTATATCTAAACCTCTATGCAAATCCTTGGCTTCCAACCGGGTTCTGTTTTACGAGGACGAGTTGTGCCAAGCTGTTGATCAAAACAAACTTCTTTGAATGATGTAGTTGGCAAGTTGGCTGCTGTTTTCTGTATATAGGCTTTTCTCTTTTTGCCTGTAGCAGGTTGGTTGGGGTTCAGCCAATATAGGAATTCTGCAAATTTTATAGCTGCATTTGATGCAGACTTAGGTATCATCTCATGGAACTTCTTGTTCTCTTGGAGTGATGGTTGGAATGATTGTTTCTGACTGTAGCTGTGGG

mRNA sequence

GGCATTTCTTGAAATTCAAATCAAAGATCGAGTTGTAATTTTCAATCCCTTCTTCTTCACGAATTTGGCGGAGTTTTTCAATTCGCTCGATTCGCAGGTTTGTTTCGATTTCGTCCATTTCCATTTCTCTGTTTCGTTTCGATTCGATTCTCGCTGCATTTCTTGAATGTTTCTGATTTGCAATACATTCATGTGTTTTAGGGTTTACTTTTAGCATCTTTTTCGAGGTGGGATTTTCTTTTTTCCGCCGTTCTTGATGTTTCTGATGAATTTCACTTGTAGTTTGAATGTTCAAGAACTCATTTACGTGTTTGAATTTTTCCGTGGCAGGTTGTTTCTTTTTTAATTATTGATGTTTAGGGTTTATTGAAGTAGTTGCAAAGGCGTTTAGGGTTTTTGTTTTTTGGTGAATGGGGAAAGTGAGTGAAGGGATGGGGAAGGTGTTTTCGGATGGTAGGGAGTCGAAATTGAAGAGGGGAAGGCGGCCGCAGCTGCGGTGCTCTAAGGGCCCGGTTGCTAAATCTTGTACTGATCTTGGGAAGAAAAGGGTGGCTGTATTGGATGCTGTAAATACAAAGAGGAACAATGTGGTGTTTGAGGATACGGCTTCTGATACAAGTCCTTTGATGTTGTCCCCTGTGAAATTGGTGATGCATATCAATCATATTGGCACCCCAAGAACTCCTCGAGTCGAAGACTGCGAATCGGAGTCACGATTGGAATCTCTGCCTATAGATCTATTGGTGAAAGTACTTTGCCATTTACACCACGACCAACTGAAGGCTGTGTTCCATGTCTCTCGACGGATCATAAAGGCTGCTTTGATGGCTAGACAATTCTACTTTAACTACACAACTCCAGATCGATCCAGACAGGAGATGTTGAAATCAACCACCCCTCGACCCGCTGAACAGCTTCCCTTACTAAGCAAGGGAGATGGCAAAGGCTTGTCATTGCCGAGCCCTCGCACTCCCAAAGCACCAAGACATGGCCCTCGTCCACCATCTCGTCTCAAAGTTTCAGAGACGAGGCAGGTTGCTGCTGTTCTGTTTCAAGAATCAGCCTTTCCTCCAAAATGCACGGTTCCATCTGTTATATCTAAACCTCTATGCAAATCCTTGGCTTCCAACCGGGTTCTGTTTTACGAGGACGAGTTGTGCCAAGCTGTTGATCAAAACAAACTTCTTTGAATGATGTAGTTGGCAAGTTGGCTGCTGTTTTCTGTATATAGGCTTTTCTCTTTTTGCCTGTAGCAGGTTGGTTGGGGTTCAGCCAATATAGGAATTCTGCAAATTTTATAGCTGCATTTGATGCAGACTTAGGTATCATCTCATGGAACTTCTTGTTCTCTTGGAGTGATGGTTGGAATGATTGTTTCTGACTGTAGCTGTGGG

Coding sequence (CDS)

ATGGGGAAAGTGAGTGAAGGGATGGGGAAGGTGTTTTCGGATGGTAGGGAGTCGAAATTGAAGAGGGGAAGGCGGCCGCAGCTGCGGTGCTCTAAGGGCCCGGTTGCTAAATCTTGTACTGATCTTGGGAAGAAAAGGGTGGCTGTATTGGATGCTGTAAATACAAAGAGGAACAATGTGGTGTTTGAGGATACGGCTTCTGATACAAGTCCTTTGATGTTGTCCCCTGTGAAATTGGTGATGCATATCAATCATATTGGCACCCCAAGAACTCCTCGAGTCGAAGACTGCGAATCGGAGTCACGATTGGAATCTCTGCCTATAGATCTATTGGTGAAAGTACTTTGCCATTTACACCACGACCAACTGAAGGCTGTGTTCCATGTCTCTCGACGGATCATAAAGGCTGCTTTGATGGCTAGACAATTCTACTTTAACTACACAACTCCAGATCGATCCAGACAGGAGATGTTGAAATCAACCACCCCTCGACCCGCTGAACAGCTTCCCTTACTAAGCAAGGGAGATGGCAAAGGCTTGTCATTGCCGAGCCCTCGCACTCCCAAAGCACCAAGACATGGCCCTCGTCCACCATCTCGTCTCAAAGTTTCAGAGACGAGGCAGGTTGCTGCTGTTCTGTTTCAAGAATCAGCCTTTCCTCCAAAATGCACGGTTCCATCTGTTATATCTAAACCTCTATGCAAATCCTTGGCTTCCAACCGGGTTCTGTTTTACGAGGACGAGTTGTGCCAAGCTGTTGATCAAAACAAACTTCTTTGA

Protein sequence

MGKVSEGMGKVFSDGRESKLKRGRRPQLRCSKGPVAKSCTDLGKKRVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRPAEQLPLLSKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTVPSVISKPLCKSLASNRVLFYEDELCQAVDQNKLL

Homology

[Close]

BLAST of Sed0009244 vs. NCBI nr
Match: XP_004146154.1 (F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g35930 [Cucumis sativus] >KGN55645.1 hypothetical protein Csa_011427 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 3.2e-109
Identity = 212/266 (79.70%), Postives = 227/266 (85.34%), Query Frame = 0


Query: 8   MGKVFSDGRE-SKLKRGRR--------------PQLRCSKGPVAKSCTDLGKKRVAVLDA 67
           MGKVF++ RE  KLKR RR               +LRCSKG VAKSCTDLG+KRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  VNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPIDLLV 127
             TKR NVV ED  SD SPLMLSPVKLVMHINHIGTP+TPRVEDCESESRLESLP+DLLV
Sbjct: 61  GKTKR-NVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRPAEQLPLL 187
           K+LCHLHHDQL+AVFHVS+RI KA L+ARQF+FNYTTPDRSRQEML+ TTPRP E  P +
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTVPSVISKP 247
           +KGDGKG SLPSP TPKAPRHGPRPPSRLKVSE RQVAAVLFQESAFPP+C VPSVISKP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEDELCQAVDQNKL 259
           LCKSLASNRVLFYEDELCQAV QNKL
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Sed0009244 vs. NCBI nr
Match: XP_022943859.1 (F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027800.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.2 bits (1040), Expect = 4.2e-109
Identity = 212/273 (77.66%), Postives = 226/273 (82.78%), Query Frame = 0


Query: 1   MGKVSEGMGKVFSDGRES-KLKRGRR--------------PQLRCSKGPVAKSCTDLGKK 60
           MGKV EGMG+ FS+ RES KLKR RR               +LRCSKG V KSCT LG+K
Sbjct: 1   MGKVKEGMGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLES 120
           RVAVLDA  TKRNN   ED  SD SPLMLSPVKLVMHINHI TPRTPRVE CESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRP 180
           LP+DLLVKVLCHLHHDQL+AVFHVS+RI KA LMARQF+FNYTTPDRSRQEML++TTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 AEQLPLLSKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTV 240
            E  P +SKGDGKG SLPSP TPKAPRHGPRPPSRLKVSE RQVAAVLFQE+ FP +C V
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMV 240

Query: 241 PSVISKPLCKSLASNRVLFYEDELCQAVDQNKL 259
           PSVI KPLCKSLASNRVLFYE+ELCQAV QNKL
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKL 273

[Close]

BLAST of Sed0009244 vs. NCBI nr
Match: XP_023538881.1 (F-box protein At4g35930 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.1 bits (1037), Expect = 9.3e-109
Identity = 212/273 (77.66%), Postives = 225/273 (82.42%), Query Frame = 0


Query: 1   MGKVSEGMGKVFSDGRES-KLKRGRR--------------PQLRCSKGPVAKSCTDLGKK 60
           MGKV EGMG+ F + RES KLKR RR               +LRCSKG V KSCT LG+K
Sbjct: 1   MGKVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLES 120
           RVAVLDA  TKRNN   ED  SD SPLMLSPVKLVMHINHI TPRTPRVE CESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRP 180
           LP+DLLVKVLCHLHHDQL+AVFHVS+RI KA LMARQF+FNYTTPDRSRQEML++TTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 AEQLPLLSKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTV 240
            E  P +SKGDGKG SLPSP TPKAPRHGPRPPSRLKVSE RQVAAVLFQES FP +C V
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMV 240

Query: 241 PSVISKPLCKSLASNRVLFYEDELCQAVDQNKL 259
           PSVI KPLCKSLASNRVLFYE+ELCQAV QNKL
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKL 273

[Close]

BLAST of Sed0009244 vs. NCBI nr
Match: XP_008448525.1 (PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [Cucumis melo var. makuwa] >TYK11403.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 404.1 bits (1037), Expect = 9.3e-109
Identity = 211/266 (79.32%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 8   MGKVFSDGRE-SKLKRGRR--------------PQLRCSKGPVAKSCTDLGKKRVAVLDA 67
           MGKVF++ RE  KLKR RR               QLRCSKG VAKSCTDLG+KRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  VNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPIDLLV 127
              KRN V+ ED  SD SPLMLSPVKLVMHINHIGTP+TPRVEDCESESRLESLP+DLLV
Sbjct: 61  GKAKRNGVL-EDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRPAEQLPLL 187
           K+LCHLHHDQL+AVFHVS+RI KA L+ARQF+FNYTTPDRSRQEML+ TTPRP E  P +
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTVPSVISKP 247
           +KGDGKG SLPSP TPKAPRHGPRPPSRLKVSE RQVAAVLFQESAFPP+C VPSVISKP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEDELCQAVDQNKL 259
           LCKSLASNRVLFYEDELCQAV QNKL
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Sed0009244 vs. NCBI nr
Match: XP_022971547.1 (F-box protein At4g35930 [Cucurbita maxima])

HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108
Identity = 212/273 (77.66%), Postives = 224/273 (82.05%), Query Frame = 0


Query: 1   MGKVSEGMGKVFSDGRES-KLKRGRR--------------PQLRCSKGPVAKSCTDLGKK 60
           MGKV EGMG  FS+ RES KLKR RR               +LRCSKG V KSCT LG+K
Sbjct: 1   MGKVKEGMGDAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLES 120
           RVAVLDA  TKRNN   ED  SD SPLMLSPVKLVMHINHI TPRTPRVE CESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRP 180
           LP+DLLVKVLCHLHHDQL+AVFHVS+RI KA LMARQF+FNYTTPDRSRQEML++TTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 AEQLPLLSKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTV 240
            E  P +SKGDGKG SLPSP  PKAPRHGPRPPSRLKVSE RQVAAVLFQES FP +C V
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHAPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPARCMV 240

Query: 241 PSVISKPLCKSLASNRVLFYEDELCQAVDQNKL 259
           PSVI KPLCKSLASNRVLFYE+ELCQAV QNKL
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKL 273

[Close]

BLAST of Sed0009244 vs. ExPASy Swiss-Prot
Match: Q5XF11 (F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.0e-62
Identity = 134/261 (51.34%), Postives = 166/261 (63.60%), Query Frame = 0


Query: 37  KSCTDLGKKRVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVK------------------ 96
           KSC DLGKKRV V D  + + N +  E   S  SPLMLSPV                   
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 97  -----------------LVMHINHIGTPRTPRVEDCESESRLESLPIDLLVKVLCHLHHD 156
                            +VM    + TP+TP+ + C SES+LESLP+DLLVK++CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 157 QLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRPAEQLPLLSKGDGKGLS 216
           QLKAVFHVS+RI  A ++ARQ++FNYTTPDRSRQEML+  TP P  + P   +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWP-FRRGDGNPTM 240

Query: 217 LPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQ-ESAFPPKCTVPSVISKP-LCKSLAS 259
           + SP TPKAP+H PRPPSR K++E +Q+ AVLFQ ++ FP +C VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of Sed0009244 vs. ExPASy Swiss-Prot
Match: O65416 (F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 2.5e-08
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 0


Query: 23  GRRPQLRCSKGPVAKSCTDLGKKRVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVKLVMH 82
           G   +L    G V +    LG+KR+ +   V    +    E      SP + S +K    
Sbjct: 51  GEEEELELGLGSV-RFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKR--- 110

Query: 83  INHIGTPRTPRVEDCESE-SRLESLPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMAR 142
                  R   V    SE SRLE LP DLL++V+C + H+ LK++  VS+ I +A+L+A+
Sbjct: 111 ----QRSRITIVSSSSSEKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAK 170

Query: 143 QFYFNYTTPDRSR 155
             +F YTTP ++R
Sbjct: 171 TLHFAYTTPKKTR 175

[Close]

BLAST of Sed0009244 vs. ExPASy Swiss-Prot
Match: Q8GX77 (F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.4e-08
Identity = 26/57 (45.61%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 98  ESESR-LESLPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRS 154
           E +SR LE LP+D+LV+++C + H+ LK +FHVS+ I +A ++A+Q +F Y+TP ++
Sbjct: 75  EGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 131

[Close]

BLAST of Sed0009244 vs. ExPASy Swiss-Prot
Match: Q9S9T6 (F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 90  RTPRVEDCES-ESRLESLPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYT 149
           + P  E  ES  S LE+L  D+L++VLCH+ H+ L  +  VS+ I KA + A++ +F+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 150 TPDR 153
           TP +
Sbjct: 110 TPKK 113

[Close]

BLAST of Sed0009244 vs. ExPASy TrEMBL
Match: A0A0A0L111 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.6e-109
Identity = 212/266 (79.70%), Postives = 227/266 (85.34%), Query Frame = 0


Query: 8   MGKVFSDGRE-SKLKRGRR--------------PQLRCSKGPVAKSCTDLGKKRVAVLDA 67
           MGKVF++ RE  KLKR RR               +LRCSKG VAKSCTDLG+KRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  VNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPIDLLV 127
             TKR NVV ED  SD SPLMLSPVKLVMHINHIGTP+TPRVEDCESESRLESLP+DLLV
Sbjct: 61  GKTKR-NVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRPAEQLPLL 187
           K+LCHLHHDQL+AVFHVS+RI KA L+ARQF+FNYTTPDRSRQEML+ TTPRP E  P +
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTVPSVISKP 247
           +KGDGKG SLPSP TPKAPRHGPRPPSRLKVSE RQVAAVLFQESAFPP+C VPSVISKP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEDELCQAVDQNKL 259
           LCKSLASNRVLFYEDELCQAV QNKL
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Sed0009244 vs. ExPASy TrEMBL
Match: A0A6J1FVG9 (F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.0e-109
Identity = 212/273 (77.66%), Postives = 226/273 (82.78%), Query Frame = 0


Query: 1   MGKVSEGMGKVFSDGRES-KLKRGRR--------------PQLRCSKGPVAKSCTDLGKK 60
           MGKV EGMG+ FS+ RES KLKR RR               +LRCSKG V KSCT LG+K
Sbjct: 1   MGKVKEGMGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLES 120
           RVAVLDA  TKRNN   ED  SD SPLMLSPVKLVMHINHI TPRTPRVE CESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRP 180
           LP+DLLVKVLCHLHHDQL+AVFHVS+RI KA LMARQF+FNYTTPDRSRQEML++TTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 AEQLPLLSKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTV 240
            E  P +SKGDGKG SLPSP TPKAPRHGPRPPSRLKVSE RQVAAVLFQE+ FP +C V
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMV 240

Query: 241 PSVISKPLCKSLASNRVLFYEDELCQAVDQNKL 259
           PSVI KPLCKSLASNRVLFYE+ELCQAV QNKL
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKL 273

[Close]

BLAST of Sed0009244 vs. ExPASy TrEMBL
Match: A0A5A7UEK6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.5e-109
Identity = 211/266 (79.32%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 8   MGKVFSDGRE-SKLKRGRR--------------PQLRCSKGPVAKSCTDLGKKRVAVLDA 67
           MGKVF++ RE  KLKR RR               QLRCSKG VAKSCTDLG+KRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  VNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPIDLLV 127
              KRN V+ ED  SD SPLMLSPVKLVMHINHIGTP+TPRVEDCESESRLESLP+DLLV
Sbjct: 61  GKAKRNGVL-EDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRPAEQLPLL 187
           K+LCHLHHDQL+AVFHVS+RI KA L+ARQF+FNYTTPDRSRQEML+ TTPRP E  P +
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTVPSVISKP 247
           +KGDGKG SLPSP TPKAPRHGPRPPSRLKVSE RQVAAVLFQESAFPP+C VPSVISKP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEDELCQAVDQNKL 259
           LCKSLASNRVLFYEDELCQAV QNKL
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Sed0009244 vs. ExPASy TrEMBL
Match: A0A1S3BKS0 (F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.5e-109
Identity = 211/266 (79.32%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 8   MGKVFSDGRE-SKLKRGRR--------------PQLRCSKGPVAKSCTDLGKKRVAVLDA 67
           MGKVF++ RE  KLKR RR               QLRCSKG VAKSCTDLG+KRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  VNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPIDLLV 127
              KRN V+ ED  SD SPLMLSPVKLVMHINHIGTP+TPRVEDCESESRLESLP+DLLV
Sbjct: 61  GKAKRNGVL-EDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRPAEQLPLL 187
           K+LCHLHHDQL+AVFHVS+RI KA L+ARQF+FNYTTPDRSRQEML+ TTPRP E  P +
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTVPSVISKP 247
           +KGDGKG SLPSP TPKAPRHGPRPPSRLKVSE RQVAAVLFQESAFPP+C VPSVISKP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEDELCQAVDQNKL 259
           LCKSLASNRVLFYEDELCQAV QNKL
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Sed0009244 vs. ExPASy TrEMBL
Match: A0A6J1I293 (F-box protein At4g35930 OS=Cucurbita maxima OX=3661 GN=LOC111470231 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.9e-109
Identity = 212/273 (77.66%), Postives = 224/273 (82.05%), Query Frame = 0


Query: 1   MGKVSEGMGKVFSDGRES-KLKRGRR--------------PQLRCSKGPVAKSCTDLGKK 60
           MGKV EGMG  FS+ RES KLKR RR               +LRCSKG V KSCT LG+K
Sbjct: 1   MGKVKEGMGDAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLES 120
           RVAVLDA  TKRNN   ED  SD SPLMLSPVKLVMHINHI TPRTPRVE CESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRP 180
           LP+DLLVKVLCHLHHDQL+AVFHVS+RI KA LMARQF+FNYTTPDRSRQEML++TTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 AEQLPLLSKGDGKGLSLPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQESAFPPKCTV 240
            E  P +SKGDGKG SLPSP  PKAPRHGPRPPSRLKVSE RQVAAVLFQES FP +C V
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHAPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPARCMV 240

Query: 241 PSVISKPLCKSLASNRVLFYEDELCQAVDQNKL 259
           PSVI KPLCKSLASNRVLFYE+ELCQAV QNKL
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKL 273

[Close]

BLAST of Sed0009244 vs. TAIR 10
Match: AT4G35930.1 (F-box family protein )

HSP 1 Score: 239.6 bits (610), Expect = 2.8e-63
Identity = 134/261 (51.34%), Postives = 166/261 (63.60%), Query Frame = 0


Query: 37  KSCTDLGKKRVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVK------------------ 96
           KSC DLGKKRV V D  + + N +  E   S  SPLMLSPV                   
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 97  -----------------LVMHINHIGTPRTPRVEDCESESRLESLPIDLLVKVLCHLHHD 156
                            +VM    + TP+TP+ + C SES+LESLP+DLLVK++CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 157 QLKAVFHVSRRIIKAALMARQFYFNYTTPDRSRQEMLKSTTPRPAEQLPLLSKGDGKGLS 216
           QLKAVFHVS+RI  A ++ARQ++FNYTTPDRSRQEML+  TP P  + P   +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWP-FRRGDGNPTM 240

Query: 217 LPSPRTPKAPRHGPRPPSRLKVSETRQVAAVLFQ-ESAFPPKCTVPSVISKP-LCKSLAS 259
           + SP TPKAP+H PRPPSR K++E +Q+ AVLFQ ++ FP +C VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of Sed0009244 vs. TAIR 10
Match: AT4G21510.1 (F-box family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 0


Query: 23  GRRPQLRCSKGPVAKSCTDLGKKRVAVLDAVNTKRNNVVFEDTASDTSPLMLSPVKLVMH 82
           G   +L    G V +    LG+KR+ +   V    +    E      SP + S +K    
Sbjct: 51  GEEEELELGLGSV-RFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKR--- 110

Query: 83  INHIGTPRTPRVEDCESE-SRLESLPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMAR 142
                  R   V    SE SRLE LP DLL++V+C + H+ LK++  VS+ I +A+L+A+
Sbjct: 111 ----QRSRITIVSSSSSEKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAK 170

Query: 143 QFYFNYTTPDRSR 155
             +F YTTP ++R
Sbjct: 171 TLHFAYTTPKKTR 175

[Close]

BLAST of Sed0009244 vs. TAIR 10
Match: AT1G61340.1 (F-box family protein )

HSP 1 Score: 59.3 bits (142), Expect = 5.3e-09
Identity = 26/57 (45.61%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 98  ESESR-LESLPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRS 154
           E +SR LE LP+D+LV+++C + H+ LK +FHVS+ I +A ++A+Q +F Y+TP ++
Sbjct: 75  EGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 131

[Close]

BLAST of Sed0009244 vs. TAIR 10
Match: AT4G05010.1 (F-box family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 90  RTPRVEDCES-ESRLESLPIDLLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYT 149
           + P  E  ES  S LE+L  D+L++VLCH+ H+ L  +  VS+ I KA + A++ +F+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 150 TPDR 153
           TP +
Sbjct: 110 TPKK 113

[Close]

BLAST of Sed0009244 vs. TAIR 10
Match: AT1G61340.2 (F-box family protein )

HSP 1 Score: 45.4 bits (106), Expect = 7.9e-05
Identity = 17/44 (38.64%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 110 LLVKVLCHLHHDQLKAVFHVSRRIIKAALMARQFYFNYTTPDRS 154
           ++V+++C + H+ LK +FHVS+ I +A ++A+Q +F Y+TP ++
Sbjct: 134 VIVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 177

The following BLAST results are available for this feature:

BLAST of Sed0009244 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146154.1	3.2e-109	79.70	F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g3593...	[more]
XP_022943859.1	4.2e-109	77.66	F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partia...	[more]
XP_023538881.1	9.3e-109	77.66	F-box protein At4g35930 [Cucurbita pepo subsp. pepo]	[more]
XP_008448525.1	9.3e-109	79.32	PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [C...	[more]
XP_022971547.1	1.2e-108	77.66	F-box protein At4g35930 [Cucurbita maxima]	[more]

BLAST of Sed0009244 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF11	4.0e-62	51.34	F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1	[more]
O65416	2.5e-08	33.08	F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2	[more]
Q8GX77	7.4e-08	45.61	F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1	[more]
Q9S9T6	2.0e-05	40.63	F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1	[more]

BLAST of Sed0009244 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L111	1.6e-109	79.70	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 ...	[more]
A0A6J1FVG9	2.0e-109	77.66	F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1	[more]
A0A5A7UEK6	4.5e-109	79.32	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 ...	[more]
A0A1S3BKS0	4.5e-109	79.32	F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1	[more]
A0A6J1I293	5.9e-109	77.66	F-box protein At4g35930 OS=Cucurbita maxima OX=3661 GN=LOC111470231 PE=4 SV=1	[more]

BLAST of Sed0009244 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35930.1	2.8e-63	51.34	F-box family protein	[more]
AT4G21510.1	1.8e-09	33.08	F-box family protein	[more]
AT1G61340.1	5.3e-09	45.61	F-box family protein	[more]
AT4G05010.1	1.4e-06	40.63	F-box family protein	[more]
AT1G61340.2	7.9e-05	38.64	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR34049:SF2	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 17..259
None	No IPR available	PANTHER	PTHR34049	F-BOX PROTEIN SKIP27	coord: 17..259
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 100..148 score: 8.59666
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 92..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009244.1	Sed0009244.1	mRNA
Sed0009244.2	Sed0009244.2	mRNA
Sed0009244.3	Sed0009244.3	mRNA
Sed0009244.4	Sed0009244.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding