Sed0009193 (gene) Chayote v1

Overview


Name	Sed0009193
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein of unknown function (DUF3464)
Location	LG13: 766177 .. 767122 (+)
RNA-Seq Expression	Sed0009193
Synteny	Sed0009193

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCATTGATATTATAAAAAAATCTAAATAATATGAAAAATATATTTTTAGGATGATGAAAAATGAAAACTGAAACACCACCGTCCACCTCACAAAAAAGGTTCTTCGGATAAGATTTCCGGCGATAAAACAAAACAAACAGAACCAAAACCAAAATCAAAGCCGCCATGAAAGCTCTGGTGTGTTCCTTTCACCAACCTCTCCACCGCTCAAAACCACCGCCATGGAAGAATCAAACAAACCAAATCAACGCCTCGAAAACCCCAAACAATCTCAAAATTCCCACAAAAACATCCCGAGCCCAAATCCAACCAAACGCCAAAGGCTTCCCCGGTAATTCTCCGGCGAAAGACACAGAATCCGCCGCCGCGAAAAAGCTCTCCGGCCAAACCAACGGCGGCGACGACGACGACGAAATTCCAGAGGCCGTAGCGAAGAGGATCATAACGAGGATCTTGACGTTCGTGGGAGCTCCGTTAGCATTGGGCGTTACATTGCTGAAGATTTTGGAGGCGATTAAAGAGAACGGCGTTTGGGAAGTGCCGATTTGGGTGCCGTTTTTGACGATTTTTGTGACGTTTGGCGCTTCGGCGTTGGGGATTGCTTATGGGGCTTTGTCGGCGTGTTTGGATCCGGAGGAAGAAGGTAGCCTGTTTGGATGGGAGCAAGTGGAGAAGAATTGGGTGGAGATGTGGAAGGAGGAAGATGAAGCTGCCAATCGCTGAGGAAAGTAAAGGAAACGAAACTAATTGGGTCTGTTTGGTTACGAGTGTATCGTATCCAGAATAGCTTTCCTCCGTTTAATCACTGTGTTTTGTGATTATTATTTCTCACATATATGAACTGTGTTTGGTTAATCGATTAAGAGTTTTTAGCACTTTTTTTAACACATGGGTTAGTGTTCGGGTTATATATATATATTTGAGTACATATTGATAGAGGGGGA

mRNA sequence

TCCCATTGATATTATAAAAAAATCTAAATAATATGAAAAATATATTTTTAGGATGATGAAAAATGAAAACTGAAACACCACCGTCCACCTCACAAAAAAGGTTCTTCGGATAAGATTTCCGGCGATAAAACAAAACAAACAGAACCAAAACCAAAATCAAAGCCGCCATGAAAGCTCTGGTGTGTTCCTTTCACCAACCTCTCCACCGCTCAAAACCACCGCCATGGAAGAATCAAACAAACCAAATCAACGCCTCGAAAACCCCAAACAATCTCAAAATTCCCACAAAAACATCCCGAGCCCAAATCCAACCAAACGCCAAAGGCTTCCCCGGTAATTCTCCGGCGAAAGACACAGAATCCGCCGCCGCGAAAAAGCTCTCCGGCCAAACCAACGGCGGCGACGACGACGACGAAATTCCAGAGGCCGTAGCGAAGAGGATCATAACGAGGATCTTGACGTTCGTGGGAGCTCCGTTAGCATTGGGCGTTACATTGCTGAAGATTTTGGAGGCGATTAAAGAGAACGGCGTTTGGGAAGTGCCGATTTGGGTGCCGTTTTTGACGATTTTTGTGACGTTTGGCGCTTCGGCGTTGGGGATTGCTTATGGGGCTTTGTCGGCGTGTTTGGATCCGGAGGAAGAAGGTAGCCTGTTTGGATGGGAGCAAGTGGAGAAGAATTGGGTGGAGATGTGGAAGGAGGAAGATGAAGCTGCCAATCGCTGAGGAAAGTAAAGGAAACGAAACTAATTGGGTCTGTTTGGTTACGAGTGTATCGTATCCAGAATAGCTTTCCTCCGTTTAATCACTGTGTTTTGTGATTATTATTTCTCACATATATGAACTGTGTTTGGTTAATCGATTAAGAGTTTTTAGCACTTTTTTTAACACATGGGTTAGTGTTCGGGTTATATATATATATTTGAGTACATATTGATAGAGGGGGA

Coding sequence (CDS)

ATGAAAGCTCTGGTGTGTTCCTTTCACCAACCTCTCCACCGCTCAAAACCACCGCCATGGAAGAATCAAACAAACCAAATCAACGCCTCGAAAACCCCAAACAATCTCAAAATTCCCACAAAAACATCCCGAGCCCAAATCCAACCAAACGCCAAAGGCTTCCCCGGTAATTCTCCGGCGAAAGACACAGAATCCGCCGCCGCGAAAAAGCTCTCCGGCCAAACCAACGGCGGCGACGACGACGACGAAATTCCAGAGGCCGTAGCGAAGAGGATCATAACGAGGATCTTGACGTTCGTGGGAGCTCCGTTAGCATTGGGCGTTACATTGCTGAAGATTTTGGAGGCGATTAAAGAGAACGGCGTTTGGGAAGTGCCGATTTGGGTGCCGTTTTTGACGATTTTTGTGACGTTTGGCGCTTCGGCGTTGGGGATTGCTTATGGGGCTTTGTCGGCGTGTTTGGATCCGGAGGAAGAAGGTAGCCTGTTTGGATGGGAGCAAGTGGAGAAGAATTGGGTGGAGATGTGGAAGGAGGAAGATGAAGCTGCCAATCGCTGA

Protein sequence

MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEAANR

Homology

[Close]

BLAST of Sed0009193 vs. NCBI nr
Match: XP_022944901.1 (uncharacterized protein PAM68-like [Cucurbita moschata])

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-60
Identity = 129/186 (69.35%), Postives = 149/186 (80.11%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SP 60
           MKALVCSF   LH SKPPPWK Q ++I+ S T  NL+I T+TSR QIQ NAKGF G+ + 
Sbjct: 1   MKALVCSFRHALHLSKPPPWK-QRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPAT 60

Query: 61  AKDTESAAAKKLSGQTN---GGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEA 120
           AKD E+ A KK SGQ N   GG DDDEIPEAVAKRIITRIL FVG P+A GVTL+KILEA
Sbjct: 61  AKDRET-AVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEA 120

Query: 121 IKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMW 180
           + E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMW
Sbjct: 121 VHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMW 180

Query: 181 KEEDEA 183
           KEEDEA
Sbjct: 181 KEEDEA 184

[Close]

BLAST of Sed0009193 vs. NCBI nr
Match: KAG6574203.1 (putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.0 bits (619), Expect = 2.0e-60
Identity = 129/188 (68.62%), Postives = 149/188 (79.26%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SP 60
           MKALVCSF   LH SKPPPWK Q ++I+ S    NL+I T+TSR QIQ NAKGF G+ + 
Sbjct: 1   MKALVCSFRHALHLSKPPPWK-QRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPAT 60

Query: 61  AKDTESAAAKKLSGQTN-----GGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKIL 120
           AKD E+ A KK SGQ N     GGDDDDEIPEAVAKRIITRIL FVG P+A GVTL+KIL
Sbjct: 61  AKDRET-AVKKPSGQNNSRDGGGGDDDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKIL 120

Query: 121 EAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVE 180
           EA+ E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVE
Sbjct: 121 EAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVE 180

Query: 181 MWKEEDEA 183
           MWKEEDEA
Sbjct: 181 MWKEEDEA 186

[Close]

BLAST of Sed0009193 vs. NCBI nr
Match: XP_023541387.1 (uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 8.3e-59
Identity = 127/187 (67.91%), Postives = 147/187 (78.61%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SP 60
           MKALVCSF   L  SKPPPWK Q ++I+ S    NL+I T+TSR QIQ NAKGF G+ + 
Sbjct: 1   MKALVCSFRHALDLSKPPPWK-QRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPAT 60

Query: 61  AKDTESAAAKKLSGQTN----GGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILE 120
           AKD E+ A KK SGQ N    GG DDDEIPEAVAKRIITRIL FVG P+A GVTL+KILE
Sbjct: 61  AKDRET-AVKKPSGQNNSRGGGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILE 120

Query: 121 AIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEM 180
           A+ E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEM
Sbjct: 121 AVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEM 180

Query: 181 WKEEDEA 183
           WKEEDEA
Sbjct: 181 WKEEDEA 185

[Close]

BLAST of Sed0009193 vs. NCBI nr
Match: XP_022968628.1 (uncharacterized protein PAM68-like [Cucurbita maxima])

HSP 1 Score: 235.7 bits (600), Expect = 3.1e-58
Identity = 126/185 (68.11%), Postives = 146/185 (78.92%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SP 60
           MKALVCSF   L  SKPPPWK Q ++I+ S T  NL++ T TSR QIQ NAKGF G+ + 
Sbjct: 1   MKALVCSFRHALDLSKPPPWK-QRSRIDNSTTTKNLRVFTGTSRGQIQLNAKGFTGSPAT 60

Query: 61  AKDTESAAAKKLSGQTNG--GDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEAI 120
           AKD E+ A KKLS Q N   G DDDEIPEAVAKRIITRIL FVG P+A GVTL+KILEA+
Sbjct: 61  AKDRET-AVKKLSDQNNSRDGGDDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEAV 120

Query: 121 KENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWK 180
            E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEA 183
           EEDEA
Sbjct: 181 EEDEA 183

[Close]

BLAST of Sed0009193 vs. NCBI nr
Match: KAG7013265.1 (putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.0 bits (598), Expect = 5.4e-58
Identity = 126/186 (67.74%), Postives = 146/186 (78.49%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SP 60
           MKALVCSF   L  SKPPPWK Q ++I+ S    NL+I T+TSR QIQ NAKGF G+ + 
Sbjct: 1   MKALVCSFRHALDLSKPPPWK-QRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPAT 60

Query: 61  AKDTESAAAKKLSGQTN---GGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEA 120
           AKD E+ A KK SGQ N   GG  DDEIPEAVAKRIITRIL FVG P+A GVTL+KILEA
Sbjct: 61  AKDRET-AVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEA 120

Query: 121 IKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMW 180
           + E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMW
Sbjct: 121 VHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMW 180

Query: 181 KEEDEA 183
           KEEDEA
Sbjct: 181 KEEDEA 184

[Close]

BLAST of Sed0009193 vs. ExPASy Swiss-Prot
Match: Q9LTD9 (Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-29
Identity = 76/180 (42.22%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTS-RAQIQPNAKGFPGNSP 60
           M+AL+CS     HR  P    ++T     S  P  L    K    +++    KGF     
Sbjct: 1   MRALLCS-----HRLLPLSSLSRTTVKTKSHNPKTLYPNNKPRWESKLHAGPKGF----- 60

Query: 61  AKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKE 120
                S  ++K        +DD  IP+ V +R++ RI+  VG PL LGV +LK+LE +K+
Sbjct: 61  ---QSSRTSEKPGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVLKD 120

Query: 121 NGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEE 180
             VW+VP+WVP+LT  VTFG+SALGIAYG+LS  LDP +  SLFG ++ ++NWVEMWKE+
Sbjct: 121 RNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWKED 167

[Close]

BLAST of Sed0009193 vs. ExPASy Swiss-Prot
Match: O49668 (Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.8e-17
Identity = 61/207 (29.47%), Postives = 94/207 (45.41%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINA----------SKTPNNLKIPTKTSRAQIQP- 60
           M ++ CSF    HR           Q ++          S+ P ++    +   ++I P 
Sbjct: 1   MASVPCSFKLSAHRRSSSKLDGNNKQCSSLVERLRDKTKSQVPKSITCINRLEISRIAPL 60

Query: 61  -----NAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDE--------------IPEAVAK 120
                + KGF    P K T+ +   K   Q++  DDD++              IPE V  
Sbjct: 61  HATMNSPKGF--GPPPKKTKKSKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEIVTN 120

Query: 121 RIITRILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGAL 178
           R+I+R+   VG PL +G+        +K     +VP WVPF+  FV FG +  G++YG +
Sbjct: 121 RMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIV 180

[Close]

BLAST of Sed0009193 vs. ExPASy TrEMBL
Match: A0A6J1FZC0 (uncharacterized protein PAM68-like OS=Cucurbita moschata OX=3662 GN=LOC111449293 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.3e-61
Identity = 129/186 (69.35%), Postives = 149/186 (80.11%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SP 60
           MKALVCSF   LH SKPPPWK Q ++I+ S T  NL+I T+TSR QIQ NAKGF G+ + 
Sbjct: 1   MKALVCSFRHALHLSKPPPWK-QRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPAT 60

Query: 61  AKDTESAAAKKLSGQTN---GGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEA 120
           AKD E+ A KK SGQ N   GG DDDEIPEAVAKRIITRIL FVG P+A GVTL+KILEA
Sbjct: 61  AKDRET-AVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEA 120

Query: 121 IKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMW 180
           + E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMW
Sbjct: 121 VHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMW 180

Query: 181 KEEDEA 183
           KEEDEA
Sbjct: 181 KEEDEA 184

[Close]

BLAST of Sed0009193 vs. ExPASy TrEMBL
Match: A0A6J1HYL3 (uncharacterized protein PAM68-like OS=Cucurbita maxima OX=3661 GN=LOC111467790 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.5e-58
Identity = 126/185 (68.11%), Postives = 146/185 (78.92%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SP 60
           MKALVCSF   L  SKPPPWK Q ++I+ S T  NL++ T TSR QIQ NAKGF G+ + 
Sbjct: 1   MKALVCSFRHALDLSKPPPWK-QRSRIDNSTTTKNLRVFTGTSRGQIQLNAKGFTGSPAT 60

Query: 61  AKDTESAAAKKLSGQTNG--GDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEAI 120
           AKD E+ A KKLS Q N   G DDDEIPEAVAKRIITRIL FVG P+A GVTL+KILEA+
Sbjct: 61  AKDRET-AVKKLSDQNNSRDGGDDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEAV 120

Query: 121 KENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWK 180
            E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEA 183
           EEDEA
Sbjct: 181 EEDEA 183

[Close]

BLAST of Sed0009193 vs. ExPASy TrEMBL
Match: A0A6J1CGP3 (uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC111011500 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 115/184 (62.50%), Postives = 138/184 (75.00%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPA 60
           MKAL+CS+ Q LH S+PPPWK + ++IN S    NL   ++ +R  ++ NAKGF G    
Sbjct: 1   MKALLCSYRQALHLSEPPPWKPR-SRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPAT 60

Query: 61  KDTESAAAKKLSGQTN-GGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKE 120
                AAA+K+SGQ N   DDDDEI EAV+ RIITRIL FVG P+A GV LLKI E IKE
Sbjct: 61  AKEREAAARKISGQNNSSNDDDDEISEAVSNRIITRILAFVGVPMAFGVALLKIFETIKE 120

Query: 121 NGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEE 180
             VW+VPIW+PFLT F+TFGAS +GIAYG LSA LDPE+EGSLFGWE+ +KNWVEMWKEE
Sbjct: 121 QKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEE 180

Query: 181 DEAA 184
           DEA+
Sbjct: 181 DEAS 183

[Close]

BLAST of Sed0009193 vs. ExPASy TrEMBL
Match: A0A5A7STB5 (Putative Sterol regulatory element-binding protein cleavage-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001970 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.1e-54
Identity = 113/183 (61.75%), Postives = 129/183 (70.49%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPA 60
           MK+  CSF Q L   KPPP   +T  IN S    NL   T TSR Q+Q NAKGF G+   
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  KDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKEN 120
                 AAK LSGQ N  DDDDEIPEAV  RIITRIL FVG P+A GVTLLKI +AIKE 
Sbjct: 61  AKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQ 120

Query: 121 GVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEED 180
            +W+VPIWVPF T F+TFGAS +GIAYG LS  LDPE++GS+ GWE+ +KNWVEMWKEED
Sbjct: 121 NLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEED 180

Query: 181 EAA 184
           E +
Sbjct: 181 EVS 183

[Close]

BLAST of Sed0009193 vs. ExPASy TrEMBL
Match: A0A1S3AZ57 (uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.1e-54
Identity = 113/183 (61.75%), Postives = 129/183 (70.49%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPA 60
           MK+  CSF Q L   KPPP   +T  IN S    NL   T TSR Q+Q NAKGF G+   
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  KDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKEN 120
                 AAK LSGQ N  DDDDEIPEAV  RIITRIL FVG P+A GVTLLKI +AIKE 
Sbjct: 61  AKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQ 120

Query: 121 GVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEED 180
            +W+VPIWVPF T F+TFGAS +GIAYG LS  LDPE++GS+ GWE+ +KNWVEMWKEED
Sbjct: 121 NLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEED 180

Query: 181 EAA 184
           E +
Sbjct: 181 EVS 183

[Close]

BLAST of Sed0009193 vs. TAIR 10
Match: AT5G52780.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 76/180 (42.22%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTS-RAQIQPNAKGFPGNSP 60
           M+AL+CS     HR  P    ++T     S  P  L    K    +++    KGF     
Sbjct: 1   MRALLCS-----HRLLPLSSLSRTTVKTKSHNPKTLYPNNKPRWESKLHAGPKGF----- 60

Query: 61  AKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKE 120
                S  ++K        +DD  IP+ V +R++ RI+  VG PL LGV +LK+LE +K+
Sbjct: 61  ---QSSRTSEKPGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVLKD 120

Query: 121 NGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEE 180
             VW+VP+WVP+LT  VTFG+SALGIAYG+LS  LDP +  SLFG ++ ++NWVEMWKE+
Sbjct: 121 RNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWKED 167

[Close]

BLAST of Sed0009193 vs. TAIR 10
Match: AT4G19100.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-18
Identity = 61/207 (29.47%), Postives = 94/207 (45.41%), Query Frame = 0


Query: 1   MKALVCSFHQPLHRSKPPPWKNQTNQINA----------SKTPNNLKIPTKTSRAQIQP- 60
           M ++ CSF    HR           Q ++          S+ P ++    +   ++I P 
Sbjct: 1   MASVPCSFKLSAHRRSSSKLDGNNKQCSSLVERLRDKTKSQVPKSITCINRLEISRIAPL 60

Query: 61  -----NAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDE--------------IPEAVAK 120
                + KGF    P K T+ +   K   Q++  DDD++              IPE V  
Sbjct: 61  HATMNSPKGF--GPPPKKTKKSKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEIVTN 120

Query: 121 RIITRILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGAL 178
           R+I+R+   VG PL +G+        +K     +VP WVPF+  FV FG +  G++YG +
Sbjct: 121 RMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIV 180

The following BLAST results are available for this feature:

BLAST of Sed0009193 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944901.1	1.5e-60	69.35	uncharacterized protein PAM68-like [Cucurbita moschata]	[more]
KAG6574203.1	2.0e-60	68.62	putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023541387.1	8.3e-59	67.91	uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968628.1	3.1e-58	68.11	uncharacterized protein PAM68-like [Cucurbita maxima]	[more]
KAG7013265.1	5.4e-58	67.74	putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of Sed0009193 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTD9	1.9e-29	42.22	Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 ...	[more]
O49668	4.8e-17	29.47	Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1	[more]

BLAST of Sed0009193 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZC0	7.3e-61	69.35	uncharacterized protein PAM68-like OS=Cucurbita moschata OX=3662 GN=LOC111449293...	[more]
A0A6J1HYL3	1.5e-58	68.11	uncharacterized protein PAM68-like OS=Cucurbita maxima OX=3661 GN=LOC111467790 P...	[more]
A0A6J1CGP3	1.2e-55	62.50	uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC11101150...	[more]
A0A5A7STB5	5.1e-54	61.75	Putative Sterol regulatory element-binding protein cleavage-activating protein O...	[more]
A0A1S3AZ57	5.1e-54	61.75	uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 ...	[more]

BLAST of Sed0009193 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52780.1	1.3e-30	42.22	Protein of unknown function (DUF3464)	[more]
AT4G19100.1	3.4e-18	29.47	Protein of unknown function (DUF3464)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021855	PAM68-like	PFAM	PF11947	DUF3464	coord: 50..178 e-value: 6.5E-37 score: 126.6
IPR021855	PAM68-like	PANTHER	PTHR34575	PROTEIN PAM68, CHLOROPLASTIC	coord: 1..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..83
None	No IPR available	PANTHER	PTHR34575:SF6	EXPRESSED PROTEIN	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009193.1	Sed0009193.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane