Sed0009170 (gene) Chayote v1

Overview
NameSed0009170
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG02: 51381463 .. 51383746 (-)
RNA-Seq ExpressionSed0009170
SyntenySed0009170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAATATGTCAACCAACCAGTCCATTATACCCTTGTAACACAAAAGTCAAAATCATCGACTAAATGGTAATTTCATCTAGAAAAAAAAAATCCGAATTGCCTGTTGGTAAAACCGTTAGGAGCGAAGACGACCACTCCCTTCACCTCCAACTGCCGGTATCAGTAAAATTCCTCATAGATTCAATTTTCATTCCCATTTTCTCGAACTCCATAGCCGAAGAAACCTCAAATTGATGCTTATTTCTGCAAATTCATGCCATTTATGGCTCCCAACTCCACCAACACTTCAATTTCTCCGCCACTGCGAGACTCAAAACGACGTGAATCAAATCCACGCTAGAATCATCAAATCCGGCCACTTCAAAGATTCGTCACTCACTACCAGAATCATCCTCGATTCAATTTCTTCTCCCCACAAACCGCTTGTCGATTTCGGTCGCTACGTCTTCTTCACTCGCTATGCTGTTCGGAGAATTCGTCGGAATCAGCTTTACGACGATCCGTTTCTCTGGAATGCTGTGGTGAAATCTTACTCGCACGGGAATGATCCTGTTCGAGCTCTGGTATTGTTCTGTATGATGCTTGAGAATGGATTTTGTGTTGATAGATTTTCGTTTTCTTTGATTCTTAAAGCGTGTGCTCGGGTGGGTTTGGTGGAGCATGGGAAACAGATTCATGGGTTGTTGATGAAGTTAGAAATTGGATCTGATTTGTTTCTGCTTAATTGTTTGATTGCAATGTATTTACGCTGTGGGGGTCTTGAGCTTGCACGGCAGGTGTTCGACAGAATGCCGATGCGGGATTCTGTTTCGTTTAATTCGATGATTGATGGTTATGTGAAGTGTGGGATGATTGATTTGGCTCGTGAATTGTTTGATTCTATGCCATTGAAGGATAAGAATTTGATCTCTTGGAACTCGATGATTGCTGGGTTTGTGCAAACAAAAGATGGGGTTGAGTTAGCACTGGAACTGTTTGAGAAAATGCCTGAGAGAGACTTGGTTTCTTGGAACACGGTTATTGGTGGTTTTGCTAAATGTGGGCGTATAGAATTTGCGCATCGGTTGTTCGATCGAATGCCGAGAAGAGATGTAATTAGTTGGTCTAATATGATTGATGGTTATGCTAAATTTGGTGATGTTGAGGTTGCAAGGAACTTGTTTGATGAAATGCCTGAGAAAGATGTGGTTGCCTGTAATGCCATGATGGCCGGCTACGCTCAGAATGGTTATTACACAGAAGCATTAGAAATCTTTTATGAAATGCAAAGCCAATGCAACTTATCTCCCGATGAAACGACGGTGGTGATCGCGCTTTCCGCTGTTTCTCAGCTAGGACGGATTGAGAAGGCTGCAAGTTTACATAGCTATTTAGTAGAAAATGGCTGTTCATTGATGGGGAAGGTTGGTGTTGGCCTCATTGACATGTATTCTAAATGTGGTAGCATTGAGAATGCCATGTCGATATTTGGGAGCATTGACAAAAAGGGTATTGACCATTGGAATGCTATGATCAGCGGGTTGGCGAGAAATGGTTTGGGGGAGTTAGCTTTCGCGGTGCTGATGGAAATGCAGAGGCTTTCTGTGAAACCAGATGATATCACTTTCATCGGTGTTTTGAATGCATGTGCCCACGCCGGGCTGGTGAAAGAAGGGATGATTTGTTTCGAGTTAATGAGAAAAGTTCACAATTTAGAGCCAAAGCTACAACATTATGGATGCATGGTTGACATCCTTGGCAAAGCAGGGCTTGTGGAAGGAGCATTGAAATTCACAGAAGAGATGCCTTTTGAGCCAAATGATATCATATGGAGGACTTTGCTTAGTGCTTGTCAAAACCATGAAAACTTTGCGATTGGAGAACCCATTGCCAGACATCTTATGAGGGTGGATTCTTGTAACTCAAGTTCTTATGTTCTTCTTTCGAATGTTTATGCCCGTCTCGGCCAGTGGAGCACTGCGAGCAAGGTACGGACAATGATGAAAAAGAAGAATTTAACTAAAGTTCCTGGCTGTAGTTGGATTGAACTAGAGGGAGTTGTTCATGAATTCTTGGTTCATGACAAATCTCATCCTTATGTTTCTGAGATATATTCTGTGTTGGATGGTTTTGGAACATCAAATTTACAGGTTGTTGACTGTAAATGTTAGTGTGGATTGGAAGTGCACATATGTAAAAATGTAAAAGTAGTTATCAACCGAATAATTCAATTGATTTAATGTCTTCATCTATGATTTGATTTGTTCATTTTTACCTTCTTAAAAATTATATGATTCAATCAAAC

mRNA sequence

TAAATATGTCAACCAACCAGTCCATTATACCCTTGTAACACAAAAGTCAAAATCATCGACTAAATGGTAATTTCATCTAGAAAAAAAAAATCCGAATTGCCTGTTGGTAAAACCGTTAGGAGCGAAGACGACCACTCCCTTCACCTCCAACTGCCGGTATCAGTAAAATTCCTCATAGATTCAATTTTCATTCCCATTTTCTCGAACTCCATAGCCGAAGAAACCTCAAATTGATGCTTATTTCTGCAAATTCATGCCATTTATGGCTCCCAACTCCACCAACACTTCAATTTCTCCGCCACTGCGAGACTCAAAACGACGTGAATCAAATCCACGCTAGAATCATCAAATCCGGCCACTTCAAAGATTCGTCACTCACTACCAGAATCATCCTCGATTCAATTTCTTCTCCCCACAAACCGCTTGTCGATTTCGGTCGCTACGTCTTCTTCACTCGCTATGCTGTTCGGAGAATTCGTCGGAATCAGCTTTACGACGATCCGTTTCTCTGGAATGCTGTGGTGAAATCTTACTCGCACGGGAATGATCCTGTTCGAGCTCTGGTATTGTTCTGTATGATGCTTGAGAATGGATTTTGTGTTGATAGATTTTCGTTTTCTTTGATTCTTAAAGCGTGTGCTCGGGTGGGTTTGGTGGAGCATGGGAAACAGATTCATGGGTTGTTGATGAAGTTAGAAATTGGATCTGATTTGTTTCTGCTTAATTGTTTGATTGCAATGTATTTACGCTGTGGGGGTCTTGAGCTTGCACGGCAGGTGTTCGACAGAATGCCGATGCGGGATTCTGTTTCGTTTAATTCGATGATTGATGGTTATGTGAAGTGTGGGATGATTGATTTGGCTCGTGAATTGTTTGATTCTATGCCATTGAAGGATAAGAATTTGATCTCTTGGAACTCGATGATTGCTGGGTTTGTGCAAACAAAAGATGGGGTTGAGTTAGCACTGGAACTGTTTGAGAAAATGCCTGAGAGAGACTTGGTTTCTTGGAACACGGTTATTGGTGGTTTTGCTAAATGTGGGCGTATAGAATTTGCGCATCGGTTGTTCGATCGAATGCCGAGAAGAGATGTAATTAGTTGGTCTAATATGATTGATGGTTATGCTAAATTTGGTGATGTTGAGGTTGCAAGGAACTTGTTTGATGAAATGCCTGAGAAAGATGTGGTTGCCTGTAATGCCATGATGGCCGGCTACGCTCAGAATGGTTATTACACAGAAGCATTAGAAATCTTTTATGAAATGCAAAGCCAATGCAACTTATCTCCCGATGAAACGACGGTGGTGATCGCGCTTTCCGCTGTTTCTCAGCTAGGACGGATTGAGAAGGCTGCAAGTTTACATAGCTATTTAGTAGAAAATGGCTGTTCATTGATGGGGAAGGTTGGTGTTGGCCTCATTGACATGTATTCTAAATGTGGTAGCATTGAGAATGCCATGTCGATATTTGGGAGCATTGACAAAAAGGGTATTGACCATTGGAATGCTATGATCAGCGGGTTGGCGAGAAATGGTTTGGGGGAGTTAGCTTTCGCGGTGCTGATGGAAATGCAGAGGCTTTCTGTGAAACCAGATGATATCACTTTCATCGGTGTTTTGAATGCATGTGCCCACGCCGGGCTGGTGAAAGAAGGGATGATTTGTTTCGAGTTAATGAGAAAAGTTCACAATTTAGAGCCAAAGCTACAACATTATGGATGCATGGTTGACATCCTTGGCAAAGCAGGGCTTGTGGAAGGAGCATTGAAATTCACAGAAGAGATGCCTTTTGAGCCAAATGATATCATATGGAGGACTTTGCTTAGTGCTTGTCAAAACCATGAAAACTTTGCGATTGGAGAACCCATTGCCAGACATCTTATGAGGGTGGATTCTTGTAACTCAAGTTCTTATGTTCTTCTTTCGAATGTTTATGCCCGTCTCGGCCAGTGGAGCACTGCGAGCAAGGTACGGACAATGATGAAAAAGAAGAATTTAACTAAAGTTCCTGGCTGTAGTTGGATTGAACTAGAGGGAGTTGTTCATGAATTCTTGGTTCATGACAAATCTCATCCTTATGTTTCTGAGATATATTCTGTGTTGGATGGTTTTGGAACATCAAATTTACAGGTTGTTGACTGTAAATGTTAGTGTGGATTGGAAGTGCACATATGTAAAAATGTAAAAGTAGTTATCAACCGAATAATTCAATTGATTTAATGTCTTCATCTATGATTTGATTTGTTCATTTTTACCTTCTTAAAAATTATATGATTCAATCAAAC

Coding sequence (CDS)

ATGCTTATTTCTGCAAATTCATGCCATTTATGGCTCCCAACTCCACCAACACTTCAATTTCTCCGCCACTGCGAGACTCAAAACGACGTGAATCAAATCCACGCTAGAATCATCAAATCCGGCCACTTCAAAGATTCGTCACTCACTACCAGAATCATCCTCGATTCAATTTCTTCTCCCCACAAACCGCTTGTCGATTTCGGTCGCTACGTCTTCTTCACTCGCTATGCTGTTCGGAGAATTCGTCGGAATCAGCTTTACGACGATCCGTTTCTCTGGAATGCTGTGGTGAAATCTTACTCGCACGGGAATGATCCTGTTCGAGCTCTGGTATTGTTCTGTATGATGCTTGAGAATGGATTTTGTGTTGATAGATTTTCGTTTTCTTTGATTCTTAAAGCGTGTGCTCGGGTGGGTTTGGTGGAGCATGGGAAACAGATTCATGGGTTGTTGATGAAGTTAGAAATTGGATCTGATTTGTTTCTGCTTAATTGTTTGATTGCAATGTATTTACGCTGTGGGGGTCTTGAGCTTGCACGGCAGGTGTTCGACAGAATGCCGATGCGGGATTCTGTTTCGTTTAATTCGATGATTGATGGTTATGTGAAGTGTGGGATGATTGATTTGGCTCGTGAATTGTTTGATTCTATGCCATTGAAGGATAAGAATTTGATCTCTTGGAACTCGATGATTGCTGGGTTTGTGCAAACAAAAGATGGGGTTGAGTTAGCACTGGAACTGTTTGAGAAAATGCCTGAGAGAGACTTGGTTTCTTGGAACACGGTTATTGGTGGTTTTGCTAAATGTGGGCGTATAGAATTTGCGCATCGGTTGTTCGATCGAATGCCGAGAAGAGATGTAATTAGTTGGTCTAATATGATTGATGGTTATGCTAAATTTGGTGATGTTGAGGTTGCAAGGAACTTGTTTGATGAAATGCCTGAGAAAGATGTGGTTGCCTGTAATGCCATGATGGCCGGCTACGCTCAGAATGGTTATTACACAGAAGCATTAGAAATCTTTTATGAAATGCAAAGCCAATGCAACTTATCTCCCGATGAAACGACGGTGGTGATCGCGCTTTCCGCTGTTTCTCAGCTAGGACGGATTGAGAAGGCTGCAAGTTTACATAGCTATTTAGTAGAAAATGGCTGTTCATTGATGGGGAAGGTTGGTGTTGGCCTCATTGACATGTATTCTAAATGTGGTAGCATTGAGAATGCCATGTCGATATTTGGGAGCATTGACAAAAAGGGTATTGACCATTGGAATGCTATGATCAGCGGGTTGGCGAGAAATGGTTTGGGGGAGTTAGCTTTCGCGGTGCTGATGGAAATGCAGAGGCTTTCTGTGAAACCAGATGATATCACTTTCATCGGTGTTTTGAATGCATGTGCCCACGCCGGGCTGGTGAAAGAAGGGATGATTTGTTTCGAGTTAATGAGAAAAGTTCACAATTTAGAGCCAAAGCTACAACATTATGGATGCATGGTTGACATCCTTGGCAAAGCAGGGCTTGTGGAAGGAGCATTGAAATTCACAGAAGAGATGCCTTTTGAGCCAAATGATATCATATGGAGGACTTTGCTTAGTGCTTGTCAAAACCATGAAAACTTTGCGATTGGAGAACCCATTGCCAGACATCTTATGAGGGTGGATTCTTGTAACTCAAGTTCTTATGTTCTTCTTTCGAATGTTTATGCCCGTCTCGGCCAGTGGAGCACTGCGAGCAAGGTACGGACAATGATGAAAAAGAAGAATTTAACTAAAGTTCCTGGCTGTAGTTGGATTGAACTAGAGGGAGTTGTTCATGAATTCTTGGTTCATGACAAATCTCATCCTTATGTTTCTGAGATATATTCTGTGTTGGATGGTTTTGGAACATCAAATTTACAGGTTGTTGACTGTAAATGTTAG

Protein sequence

MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHKPLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELARQVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDGVELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKFGDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVDCKC
Homology
BLAST of Sed0009170 vs. NCBI nr
Match: XP_038877671.1 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Benincasa hispida])

HSP 1 Score: 1145.6 bits (2962), Expect = 0.0e+00
Identity = 551/640 (86.09%), Postives = 598/640 (93.44%), Query Frame = 0

Query: 1   MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSP 60
           ML+SANSCH W  TP TL  LRHCETQNDVNQIHARIIK+G+FK+SSLTT+IIL+SISS 
Sbjct: 1   MLVSANSCHSWPSTPLTLLLLRHCETQNDVNQIHARIIKTGYFKNSSLTTKIILNSISST 60

Query: 61  HKPLVDFGRYVFFTRYAVRRIRRNQLY--DDPFLWNAVVKSYSHGNDPVRALVLFCMMLE 120
            KPLV+F RYVFFTR+AV+R RRN+ +  DDPFLWNAV+KSYSHGNDPVRALVLFCMMLE
Sbjct: 61  RKPLVEFARYVFFTRHAVQRTRRNRDHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120

Query: 121 NGFCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLEL 180
           NGF VD+FSFSLILKACARV LVE GKQIHGLLMKLEIGS+LFLLNCLIAMYLRCG +E 
Sbjct: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEF 180

Query: 181 ARQVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTK 240
           ARQVFDRMPM+DSVS+NSMIDGYVKCGMIDLARELFDSMP +DKNLISWNSM+ GF QTK
Sbjct: 181 ARQVFDRMPMQDSVSYNSMIDGYVKCGMIDLARELFDSMPSEDKNLISWNSMLGGFAQTK 240

Query: 241 DGVELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYA 300
           DGV LALELFEKMPERDLVSWNT+IGGFAKCGRIEFAH LF+RMP+RDVISWSNMIDGYA
Sbjct: 241 DGVGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300

Query: 301 KFGDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVV 360
           K GD+EVARNLFDEMPEKDVVA NAMMAGYAQNGYY+EALEIF++MQ Q NLSPDETT+V
Sbjct: 301 KLGDIEVARNLFDEMPEKDVVAFNAMMAGYAQNGYYSEALEIFHKMQRQTNLSPDETTLV 360

Query: 361 IALSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKK 420
           +ALSAVSQLGRIEKAAS+HSYLVENG S+MGKVGV LIDMYSKCGSIENAM IF  I++K
Sbjct: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGIEQK 420

Query: 421 GIDHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICF 480
           GI+HWNAMISG+ARNGLGELAF +L+EMQRLSVKPD ITFIGVLNACAHAGLVKEGMICF
Sbjct: 421 GINHWNAMISGMARNGLGELAFGMLVEMQRLSVKPDGITFIGVLNACAHAGLVKEGMICF 480

Query: 481 ELMRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHEN 540
           ELMRKVH LEPKLQHYGCMVDILGKAGL+EGALKF EEMP EPNDIIWRTLLSACQNHEN
Sbjct: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLIEGALKFIEEMPIEPNDIIWRTLLSACQNHEN 540

Query: 541 FAIGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIE 600
           FA+GEPIA++LMR+DSCNSSSYV+LSN+YARLG W+ ASKVR  MKK+NLTKVPGCSWIE
Sbjct: 541 FAMGEPIAKYLMRMDSCNSSSYVILSNIYARLGLWTAASKVRMTMKKQNLTKVPGCSWIE 600

Query: 601 LEGVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVDCKC 639
           LEGVVHEFLV DKSHP+VSEIYSVLDGFGTSNLQV+DCKC
Sbjct: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 640

BLAST of Sed0009170 vs. NCBI nr
Match: XP_004133915.1 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucumis sativus])

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 541/638 (84.80%), Postives = 590/638 (92.48%), Query Frame = 0

Query: 1   MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSP 60
           ML+ ANSCHLW  TPPTL  LRHCETQNDVNQ+HARIIK+G+ K+SSLTT+IIL+SISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENG 120
           HKPLV+F RYVFFTRYAV+RIRRN L DDPFLWNAV+KSYSHGN+PVRALVLFCMMLENG
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENG 120

Query: 121 FCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELAR 180
           FCVD+FSFSLILKACARV LVE GKQIHGLLMKLEIGS+LFLLNCLIAMYLRCG +E AR
Sbjct: 121 FCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFAR 180

Query: 181 QVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDG 240
           QVFDRMP++DSVS+NSMIDGYVK G IDLARELFDSMPL+DKNLISWNSM+ GF QTKDG
Sbjct: 181 QVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDG 240

Query: 241 VELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKF 300
           + LALELFEKMPERDLVSWNT+IGGFAKCGRIEFAH LF+RMP+RDVISWSNMIDGYAK 
Sbjct: 241 IGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKL 300

Query: 301 GDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIA 360
           GD++VAR LFDEMP+KDVVA N +MAGYAQNGYYTEALEIF+EMQ Q NLSPDETT+V+A
Sbjct: 301 GDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVA 360

Query: 361 LSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGI 420
           LSA+SQLG +EKAAS+H+Y +ENG S+ GKV V LIDMYSKCGSIENA+ IF  +D+KGI
Sbjct: 361 LSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGI 420

Query: 421 DHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFEL 480
           DHWNAMISG+ARNGLG+LAF +L+EM RLSVKPD ITFIGVLNACAHAGLVKEG+ICFEL
Sbjct: 421 DHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFEL 480

Query: 481 MRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFA 540
           MRKVH LEPKLQHYGCMVDILGKAGLVEGALKF EEMP EPNDIIWRTLLSACQNHENF 
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFT 540

Query: 541 IGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELE 600
           IGE IA+HLM +DSCNSSSYVLLSN+YARLG WS ASKVR MMKK+NLTKVPGCSWIELE
Sbjct: 541 IGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELE 600

Query: 601 GVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVDCKC 639
           GVVHEFLV DKSHPYVSEIYSVLDGFG SNLQV+DCKC
Sbjct: 601 GVVHEFLVRDKSHPYVSEIYSVLDGFGASNLQVIDCKC 638

BLAST of Sed0009170 vs. NCBI nr
Match: KAG7028669.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1140.6 bits (2949), Expect = 0.0e+00
Identity = 546/637 (85.71%), Postives = 585/637 (91.84%), Query Frame = 0

Query: 1   MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSP 60
           MLIS+NSCHLW  TP TL  LR CETQNDVNQIHARIIK+G FKDSSL T+IIL+SISSP
Sbjct: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106

Query: 61  HKPLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENG 120
           H+PLV+F RYVFFTRYAV+RIRRN L DDPFLWNAV+KSYSHGN P+RALVLFCMMLENG
Sbjct: 107 HRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 166

Query: 121 FCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELAR 180
           FCVD+FSFSLILKACARVGLVE GKQIHG LMKLEIGS+LFLLNCLI +Y+RCG +E+AR
Sbjct: 167 FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR 226

Query: 181 QVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDG 240
           QVFDRMPM+DSVS+NSMIDGYVKCG++DLARELFDSMPLK+KNLISWNSMI GF QTKDG
Sbjct: 227 QVFDRMPMQDSVSYNSMIDGYVKCGLVDLARELFDSMPLKEKNLISWNSMIGGFAQTKDG 286

Query: 241 VELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKF 300
           VELALELFEKMPERDLVSWNT+IGGFAKCGR+EFAH LFDRMP+RDVISWSNMIDGYAK 
Sbjct: 287 VELALELFEKMPERDLVSWNTIIGGFAKCGRMEFAHHLFDRMPKRDVISWSNMIDGYAKL 346

Query: 301 GDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIA 360
           GD+EVARNLFDEMPEKDVVA NAMMAGYAQNGYYTEALEIFY MQ Q NLSP+ETT+ IA
Sbjct: 347 GDIEVARNLFDEMPEKDVVAYNAMMAGYAQNGYYTEALEIFYTMQRQRNLSPEETTLAIA 406

Query: 361 LSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGI 420
            SAVSQLG +EKA S+HSYLVENG SLMGKVGVGLIDMYSKCGSIENAMSIF  ID+KGI
Sbjct: 407 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 466

Query: 421 DHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFEL 480
           DHWNAMISG+ARN LGELAF +LMEMQRLSV PDDITFIGVLNACAHAGLVKEG ICFEL
Sbjct: 467 DHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 526

Query: 481 MRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFA 540
           MRKVH LEPKLQHYGCMVDILGKAGL+E ALKF EEMP EPNDIIWRTLLSACQNHE F 
Sbjct: 527 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 586

Query: 541 IGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELE 600
           IGEPIA+HLMR DSCNSSSYVLLSN+Y RLG WS AS+VRTMMKK+ LTK PGCSWIELE
Sbjct: 587 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELE 646

Query: 601 GVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVDCK 638
           GVVHEFLVHDKSHP V+EIY VLDG+ TSNLQ +D K
Sbjct: 647 GVVHEFLVHDKSHPLVTEIYLVLDGYETSNLQDIDGK 683

BLAST of Sed0009170 vs. NCBI nr
Match: KAG6597201.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 546/635 (85.98%), Postives = 584/635 (91.97%), Query Frame = 0

Query: 1   MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSP 60
           MLIS+NSCHLW  TP TL  LR CETQNDVNQIHARIIK+G FKDSSL T+IIL+SISSP
Sbjct: 1   MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 60

Query: 61  HKPLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENG 120
           H+PLV+F RYVFFTRYAV+RIRRN L DDPFLWNAV+KSYSHGN P+RALVLFCMMLENG
Sbjct: 61  HRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 120

Query: 121 FCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELAR 180
           FCVD+FSFSLILKACARVGLVE GKQIHG LMKLEIGS+LFLLNCLI +Y+RCG +E+AR
Sbjct: 121 FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITVYIRCGEIEVAR 180

Query: 181 QVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDG 240
           QVFDRMPM+DSVS+NSMIDGYVKCG++DLARELFDSMPLK+KNLISWNSMI GF QTKDG
Sbjct: 181 QVFDRMPMQDSVSYNSMIDGYVKCGLVDLARELFDSMPLKEKNLISWNSMIGGFAQTKDG 240

Query: 241 VELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKF 300
           VELALELFEKMPERDLVSWNT+IGGFAKCGR+EFAH LFDRMP+RDVISWSNMIDGYAK 
Sbjct: 241 VELALELFEKMPERDLVSWNTIIGGFAKCGRMEFAHHLFDRMPKRDVISWSNMIDGYAKL 300

Query: 301 GDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIA 360
           GD+EVARNLFDEMPEKDVVA NAMMAGYAQNGYYTEALEIFY MQ Q NLSP+ETT+ IA
Sbjct: 301 GDIEVARNLFDEMPEKDVVAYNAMMAGYAQNGYYTEALEIFYTMQRQRNLSPEETTLAIA 360

Query: 361 LSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGI 420
            SAVSQLG +EKA S+HSYLVENG SLMGKVGVGLIDMYSKCGSIENAMSIF  ID+KGI
Sbjct: 361 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 420

Query: 421 DHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFEL 480
           DHWNAMISG+ARNGLGELAF +LMEMQRLSV PDDITFIGVLNACAHAGLVKEG ICFEL
Sbjct: 421 DHWNAMISGMARNGLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 480

Query: 481 MRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFA 540
           MRKVH LEPKLQHYGCMVDILGKAGL+E ALKF EEMP EPNDIIWRTLLSACQNHE F 
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 540

Query: 541 IGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELE 600
           IGEPIA+HLMR DSCNSSSYVLLSN+Y RLG WS ASKVRTMMKK+ LTK PGCSWIEL+
Sbjct: 541 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASKVRTMMKKRKLTKTPGCSWIELK 600

Query: 601 GVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVD 636
           GVVHEFLVHDKSHP V+EIY VLDG  TSNLQ +D
Sbjct: 601 GVVHEFLVHDKSHPLVTEIYFVLDGCETSNLQDID 635

BLAST of Sed0009170 vs. NCBI nr
Match: XP_008438168.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucumis melo] >KAA0049043.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17521.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 543/638 (85.11%), Postives = 588/638 (92.16%), Query Frame = 0

Query: 1   MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSP 60
           ML+ ANSCHLW  TPPTL  LRHCETQNDVNQ+HARIIK+G+ K+SSLTT+IIL+SISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENG 120
           HKPLV+F RYVFFTRYAV+RIRR+ L DDPFLWNAV+KSYSHGNDPVRALVLFCMMLENG
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIRRSHLDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENG 120

Query: 121 FCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELAR 180
           FCVD+FSFSLILKACARV LVE GKQIHGLLMKLEIGS+LFLLNCLIAMYLRCG +E AR
Sbjct: 121 FCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFAR 180

Query: 181 QVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDG 240
           QVFD MP++DSVS+NSMIDGYVK G IDLARELFDSMPL DKNLISWNSM+ GF QTKDG
Sbjct: 181 QVFDTMPVQDSVSYNSMIDGYVKSGTIDLARELFDSMPLGDKNLISWNSMLGGFAQTKDG 240

Query: 241 VELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKF 300
           + LALELFEKMPERDLVSWNT+IGGFAKCGRIEFAH LF+RMP+RDVISWSNMIDGYAK 
Sbjct: 241 IGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKL 300

Query: 301 GDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIA 360
           GD++VAR LFDEMP+KDVVA N MMAGYAQNGYYTEALEIF++MQ Q NLSPDETT+V+A
Sbjct: 301 GDIKVARTLFDEMPDKDVVAFNTMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVA 360

Query: 361 LSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGI 420
           LSA+SQLG IEKAAS+H+Y VENG S+ GKV V LIDMYSKCGSIENA  IF  +D+KGI
Sbjct: 361 LSAISQLGHIEKAASMHNYFVENGISVTGKVAVALIDMYSKCGSIENAKLIFDGVDQKGI 420

Query: 421 DHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFEL 480
           DHWNAMISG+ARNGLG+LAF +L+EM RL VKPD ITFIGVLNACAHAGLVKEG+ICFEL
Sbjct: 421 DHWNAMISGMARNGLGKLAFEMLVEMHRLPVKPDGITFIGVLNACAHAGLVKEGLICFEL 480

Query: 481 MRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFA 540
           MRKVH LEPKLQHYGCMVDILGKAGLVEGALKF EEMP EPNDIIWRTLLSACQNHENFA
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFA 540

Query: 541 IGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELE 600
           IGE IA+HLMR+DSCNSSSYVLLSN+Y+RLG WS ASKVR  MKKKNLTKVPGCSWIELE
Sbjct: 541 IGELIAKHLMRMDSCNSSSYVLLSNIYSRLGLWSAASKVRMTMKKKNLTKVPGCSWIELE 600

Query: 601 GVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVDCKC 639
           GVVHEFLV DKSHPYVSEIYSVLDGFGTSNLQV+DCKC
Sbjct: 601 GVVHEFLVRDKSHPYVSEIYSVLDGFGTSNLQVIDCKC 638

BLAST of Sed0009170 vs. ExPASy Swiss-Prot
Match: O22137 (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR4 PE=1 SV=2)

HSP 1 Score: 766.5 bits (1978), Expect = 2.3e-220
Identity = 363/592 (61.32%), Postives = 459/592 (77.53%), Query Frame = 0

Query: 17  TLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHKPLVDFGRYVFFTRY 76
           T+  L  C+T +DVNQIH R+IK+G  K+S+LTTRI+L   SS    L DF R VF   Y
Sbjct: 15  TIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFH-EY 74

Query: 77  AVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCVDRFSFSLILKACA 136
            V      ++ +DPFLWNAV+KS+SHG DP +AL+L C+MLENG  VD+FS SL+LKAC+
Sbjct: 75  HVCSFSFGEV-EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACS 134

Query: 137 RVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELARQVFDRMPMRDSVSFNS 196
           R+G V+ G QIHG L K  + SDLFL NCLI +YL+CG L L+RQ+FDRMP RDSVS+NS
Sbjct: 135 RLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNS 194

Query: 197 MIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDGVELALELFEKMPERDL 256
           MIDGYVKCG+I  ARELFD MP++ KNLISWNSMI+G+ QT DGV++A +LF  MPE+DL
Sbjct: 195 MIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDL 254

Query: 257 VSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKFGDVEVARNLFDEMPEK 316
           +SWN++I G+ K GRIE A  LFD MPRRDV++W+ MIDGYAK G V  A+ LFD+MP +
Sbjct: 255 ISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR 314

Query: 317 DVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSAVSQLGRIEKAASL 376
           DVVA N+MMAGY QN Y+ EALEIF +M+ + +L PD+TT+VI L A++QLGR+ KA  +
Sbjct: 315 DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDM 374

Query: 377 HSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHWNAMISGLARNGLG 436
           H Y+VE    L GK+GV LIDMYSKCGSI++AM +F  I+ K IDHWNAMI GLA +GLG
Sbjct: 375 HLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLG 434

Query: 437 ELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRKVHNLEPKLQHYGC 496
           E AF +L++++RLS+KPDDITF+GVLNAC+H+GLVKEG++CFELMR+ H +EP+LQHYGC
Sbjct: 435 ESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 494

Query: 497 MVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGEPIARHLMRVDSCN 556
           MVDIL ++G +E A    EEMP EPND+IWRT L+AC +H+ F  GE +A+HL+     N
Sbjct: 495 MVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYN 554

Query: 557 SSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVVHEFLV 609
            SSYVLLSN+YA  G W    +VRTMMK++ + K+PGCSWIEL+G VHEF V
Sbjct: 555 PSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604

BLAST of Sed0009170 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 1.7e-122
Identity = 233/619 (37.64%), Postives = 371/619 (59.94%), Query Frame = 0

Query: 16  PTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHKPLVDFGRYVFFTR 75
           P+L  L +C+T   +  IHA++IK G    +   +++I   I SPH   + +   VF T 
Sbjct: 35  PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT- 94

Query: 76  YAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCVDRFSFSLILKAC 135
                I+   L     +WN + + ++  +DPV AL L+  M+  G   + ++F  +LK+C
Sbjct: 95  -----IQEPNL----LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 154

Query: 136 ARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELARQVFDRMPMRDSVSFN 195
           A+    + G+QIHG ++KL    DL++   LI+MY++ G LE A +VFD+ P RD VS+ 
Sbjct: 155 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 214

Query: 196 SMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDGVELALELFEKMPER- 255
           ++I GY   G I+ A++LFD +P+KD  ++SWN+MI+G+ +T +  E ALELF+ M +  
Sbjct: 215 ALIKGYASRGYIENAQKLFDEIPVKD--VVSWNAMISGYAETGNYKE-ALELFKDMMKTN 274

Query: 256 ---DLVSWNTVIGGFAKCGRIEFAHRLF----DRMPRRDVISWSNMIDGYAKFGDVEVAR 315
              D  +  TV+   A+ G IE   ++     D     ++   + +ID Y+K G++E A 
Sbjct: 275 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 334

Query: 316 NLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSAVSQL 375
            LF+ +P KDV++ N ++ GY     Y EAL +F EM  +   +P++ T++  L A + L
Sbjct: 335 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM-LRSGETPNDVTMLSILPACAHL 394

Query: 376 GRIEKAASLHSYLVE--NGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHWNA 435
           G I+    +H Y+ +   G +    +   LIDMY+KCG IE A  +F SI  K +  WNA
Sbjct: 395 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 454

Query: 436 MISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRKVH 495
           MI G A +G  + +F +   M+++ ++PDDITF+G+L+AC+H+G++  G   F  M + +
Sbjct: 455 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 514

Query: 496 NLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGEPI 555
            + PKL+HYGCM+D+LG +GL + A +    M  EP+ +IW +LL AC+ H N  +GE  
Sbjct: 515 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 574

Query: 556 ARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVVHE 615
           A +L++++  N  SYVLLSN+YA  G+W+  +K R ++  K + KVPGCS IE++ VVHE
Sbjct: 575 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 634

Query: 616 FLVHDKSHPYVSEIYSVLD 625
           F++ DK HP   EIY +L+
Sbjct: 635 FIIGDKFHPRNREIYGMLE 639

BLAST of Sed0009170 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.2e-120
Identity = 225/616 (36.53%), Postives = 353/616 (57.31%), Query Frame = 0

Query: 18  LQFLRHCETQNDVNQIHARIIKSGHFKD----SSLTTRIILDSISSPHKPLVDFGRYVFF 77
           +  +  C +   + Q H  +I++G F D    S L     L S +S     +++ R VF 
Sbjct: 34  ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS-----LEYARKVF- 93

Query: 78  TRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCV-DRFSFSLIL 137
                  I +     + F WN ++++Y+ G DPV ++  F  M+    C  ++++F  ++
Sbjct: 94  -----DEIPK----PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 153

Query: 138 KACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELARQVFDRMPMRDSV 197
           KA A V  +  G+ +HG+ +K  +GSD+F+ N LI  Y  CG L+ A +VF  +  +D V
Sbjct: 154 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 213

Query: 198 SFNSMIDGYVKCGMIDLARELFDSMPLKD-----KNLISWNSMIAGFVQTKDGVELALEL 257
           S+NSMI+G+V+ G  D A ELF  M  +D       ++   S  A     + G ++   +
Sbjct: 214 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 273

Query: 258 FEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKFGDVEVAR 317
            E     +L   N ++  + KCG IE A RLFD M  +D ++W+ M+DGYA   D E AR
Sbjct: 274 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 333

Query: 318 NLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSAVSQL 377
            + + MP+KD+VA NA+++ Y QNG   EAL +F+E+Q Q N+  ++ T+V  LSA +Q+
Sbjct: 334 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 393

Query: 378 GRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHWNAMI 437
           G +E    +HSY+ ++G  +   V   LI MYSKCG +E +  +F S++K+ +  W+AMI
Sbjct: 394 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 453

Query: 438 SGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRKVHNL 497
            GLA +G G  A  +  +MQ  +VKP+ +TF  V  AC+H GLV E    F  M   + +
Sbjct: 454 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 513

Query: 498 EPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGEPIAR 557
            P+ +HY C+VD+LG++G +E A+KF E MP  P+  +W  LL AC+ H N  + E    
Sbjct: 514 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT 573

Query: 558 HLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVVHEFL 617
            L+ ++  N  ++VLLSN+YA+LG+W   S++R  M+   L K PGCS IE++G++HEFL
Sbjct: 574 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 633

Query: 618 VHDKSHPYVSEIYSVL 624
             D +HP   ++Y  L
Sbjct: 634 SGDNAHPMSEKVYGKL 634

BLAST of Sed0009170 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.1e-113
Identity = 231/636 (36.32%), Postives = 351/636 (55.19%), Query Frame = 0

Query: 3   ISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHK 62
           I+ NS H ++   P L  L  C+    + QI A++I +G   D   ++R+I     S   
Sbjct: 42  INWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE-- 101

Query: 63  PLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFC 122
                 RY+ ++   ++ I    +    F WN  ++ +S   +P  + +L+  ML +G C
Sbjct: 102 -----SRYLDYSVKILKGIENPNI----FSWNVTIRGFSESENPKESFLLYKQMLRHGCC 161

Query: 123 ---VDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELA 182
               D F++ ++ K CA + L   G  I G ++KL +     + N  I M+  CG +E A
Sbjct: 162 ESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENA 221

Query: 183 RQVFDRMPMRDSVSFNSMIDGYVKCGMIDLA---RELFDSMPLKDKN-----LISWNSMI 242
           R+VFD  P+RD VS+N +I+GY K G  + A    +L +S  +K  +     L+S  SM+
Sbjct: 222 RKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSML 281

Query: 243 AGFVQTKDGVELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWS 302
               + K+  E   E   +M    +   N ++  F+KCG I  A R+FD + +R ++SW+
Sbjct: 282 GDLNRGKEFYEYVKENGLRM---TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWT 341

Query: 303 NMIDGYAKFGDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLS 362
            MI GYA+ G ++V+R LFD+M EKDVV  NAM+ G  Q     +AL +F EMQ+  N  
Sbjct: 342 TMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS-NTK 401

Query: 363 PDETTVVIALSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSI 422
           PDE T++  LSA SQLG ++    +H Y+ +   SL   +G  L+DMY+KCG+I  A+S+
Sbjct: 402 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 461

Query: 423 FGSIDKKGIDHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLV 482
           F  I  +    + A+I GLA +G    A +   EM    + PD+ITFIG+L+AC H G++
Sbjct: 462 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 521

Query: 483 KEGMICFELMRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLS 542
           + G   F  M+   NL P+L+HY  MVD+LG+AGL+E A +  E MP E +  +W  LL 
Sbjct: 522 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLF 581

Query: 543 ACQNHENFAIGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKV 602
            C+ H N  +GE  A+ L+ +D  +S  YVLL  +Y     W  A + R MM ++ + K+
Sbjct: 582 GCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKI 641

Query: 603 PGCSWIELEGVVHEFLVHDKSHPYVSEIYSVLDGFG 628
           PGCS IE+ G+V EF+V DKS P   +IY  L   G
Sbjct: 642 PGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLG 662

BLAST of Sed0009170 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 5.5e-113
Identity = 219/610 (35.90%), Postives = 342/610 (56.07%), Query Frame = 0

Query: 18  LQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHKPLVDFGRYVFFTRYA 77
           LQ L  C   N V Q+HA+II+    +D  +  ++I  ++S   +           T  A
Sbjct: 23  LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLI-SALSLCRQ-----------TNLA 82

Query: 78  VRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCVDRFSFSLILKACAR 137
           VR   + Q   +  L N+++++++  + P +A  +F  M   G   D F++  +LKAC+ 
Sbjct: 83  VRVFNQVQ-EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 142

Query: 138 VGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLEL--ARQVFDRMPMRDSVSFN 197
              +   K +H  + KL + SD+++ N LI  Y RCGGL +  A ++F++M  RD+VS+N
Sbjct: 143 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 202

Query: 198 SMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDGVELALELFEKMPERD 257
           SM+ G VK G +  AR LFD                                  +MP+RD
Sbjct: 203 SMLGGLVKAGELRDARRLFD----------------------------------EMPQRD 262

Query: 258 LVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKFGDVEVARNLFDEM-- 317
           L+SWNT++ G+A+C  +  A  LF++MP R+ +SWS M+ GY+K GD+E+AR +FD+M  
Sbjct: 263 LISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 322

Query: 318 PEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSAVSQLGRIEKA 377
           P K+VV    ++AGYA+ G   EA  +  +M +   L  D   V+  L+A ++ G +   
Sbjct: 323 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS-GLKFDAAAVISILAACTESGLLSLG 382

Query: 378 ASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHWNAMISGLARN 437
             +HS L  +       V   L+DMY+KCG+++ A  +F  I KK +  WN M+ GL  +
Sbjct: 383 MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVH 442

Query: 438 GLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRKVHNLEPKLQH 497
           G G+ A  +   M+R  ++PD +TFI VL +C HAGL+ EG+  F  M KV++L P+++H
Sbjct: 443 GHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH 502

Query: 498 YGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGEPIARHLMRVD 557
           YGC+VD+LG+ G ++ A+K  + MP EPN +IW  LL AC+ H    I + +  +L+++D
Sbjct: 503 YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 562

Query: 558 SCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVVHEFLVHDKSH 617
            C+  +Y LLSN+YA    W   + +R+ MK   + K  G S +ELE  +HEF V DKSH
Sbjct: 563 PCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSH 584

Query: 618 PYVSEIYSVL 624
           P   +IY +L
Sbjct: 623 PKSDQIYQML 584

BLAST of Sed0009170 vs. ExPASy TrEMBL
Match: A0A0A0L4E1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126180 PE=4 SV=1)

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 541/638 (84.80%), Postives = 590/638 (92.48%), Query Frame = 0

Query: 1   MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSP 60
           ML+ ANSCHLW  TPPTL  LRHCETQNDVNQ+HARIIK+G+ K+SSLTT+IIL+SISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENG 120
           HKPLV+F RYVFFTRYAV+RIRRN L DDPFLWNAV+KSYSHGN+PVRALVLFCMMLENG
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENG 120

Query: 121 FCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELAR 180
           FCVD+FSFSLILKACARV LVE GKQIHGLLMKLEIGS+LFLLNCLIAMYLRCG +E AR
Sbjct: 121 FCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFAR 180

Query: 181 QVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDG 240
           QVFDRMP++DSVS+NSMIDGYVK G IDLARELFDSMPL+DKNLISWNSM+ GF QTKDG
Sbjct: 181 QVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDG 240

Query: 241 VELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKF 300
           + LALELFEKMPERDLVSWNT+IGGFAKCGRIEFAH LF+RMP+RDVISWSNMIDGYAK 
Sbjct: 241 IGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKL 300

Query: 301 GDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIA 360
           GD++VAR LFDEMP+KDVVA N +MAGYAQNGYYTEALEIF+EMQ Q NLSPDETT+V+A
Sbjct: 301 GDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVA 360

Query: 361 LSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGI 420
           LSA+SQLG +EKAAS+H+Y +ENG S+ GKV V LIDMYSKCGSIENA+ IF  +D+KGI
Sbjct: 361 LSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGI 420

Query: 421 DHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFEL 480
           DHWNAMISG+ARNGLG+LAF +L+EM RLSVKPD ITFIGVLNACAHAGLVKEG+ICFEL
Sbjct: 421 DHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFEL 480

Query: 481 MRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFA 540
           MRKVH LEPKLQHYGCMVDILGKAGLVEGALKF EEMP EPNDIIWRTLLSACQNHENF 
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFT 540

Query: 541 IGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELE 600
           IGE IA+HLM +DSCNSSSYVLLSN+YARLG WS ASKVR MMKK+NLTKVPGCSWIELE
Sbjct: 541 IGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELE 600

Query: 601 GVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVDCKC 639
           GVVHEFLV DKSHPYVSEIYSVLDGFG SNLQV+DCKC
Sbjct: 601 GVVHEFLVRDKSHPYVSEIYSVLDGFGASNLQVIDCKC 638

BLAST of Sed0009170 vs. ExPASy TrEMBL
Match: A0A5A7TZK8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003890 PE=4 SV=1)

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 543/638 (85.11%), Postives = 588/638 (92.16%), Query Frame = 0

Query: 1   MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSP 60
           ML+ ANSCHLW  TPPTL  LRHCETQNDVNQ+HARIIK+G+ K+SSLTT+IIL+SISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENG 120
           HKPLV+F RYVFFTRYAV+RIRR+ L DDPFLWNAV+KSYSHGNDPVRALVLFCMMLENG
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIRRSHLDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENG 120

Query: 121 FCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELAR 180
           FCVD+FSFSLILKACARV LVE GKQIHGLLMKLEIGS+LFLLNCLIAMYLRCG +E AR
Sbjct: 121 FCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFAR 180

Query: 181 QVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDG 240
           QVFD MP++DSVS+NSMIDGYVK G IDLARELFDSMPL DKNLISWNSM+ GF QTKDG
Sbjct: 181 QVFDTMPVQDSVSYNSMIDGYVKSGTIDLARELFDSMPLGDKNLISWNSMLGGFAQTKDG 240

Query: 241 VELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKF 300
           + LALELFEKMPERDLVSWNT+IGGFAKCGRIEFAH LF+RMP+RDVISWSNMIDGYAK 
Sbjct: 241 IGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKL 300

Query: 301 GDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIA 360
           GD++VAR LFDEMP+KDVVA N MMAGYAQNGYYTEALEIF++MQ Q NLSPDETT+V+A
Sbjct: 301 GDIKVARTLFDEMPDKDVVAFNTMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVA 360

Query: 361 LSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGI 420
           LSA+SQLG IEKAAS+H+Y VENG S+ GKV V LIDMYSKCGSIENA  IF  +D+KGI
Sbjct: 361 LSAISQLGHIEKAASMHNYFVENGISVTGKVAVALIDMYSKCGSIENAKLIFDGVDQKGI 420

Query: 421 DHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFEL 480
           DHWNAMISG+ARNGLG+LAF +L+EM RL VKPD ITFIGVLNACAHAGLVKEG+ICFEL
Sbjct: 421 DHWNAMISGMARNGLGKLAFEMLVEMHRLPVKPDGITFIGVLNACAHAGLVKEGLICFEL 480

Query: 481 MRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFA 540
           MRKVH LEPKLQHYGCMVDILGKAGLVEGALKF EEMP EPNDIIWRTLLSACQNHENFA
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFA 540

Query: 541 IGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELE 600
           IGE IA+HLMR+DSCNSSSYVLLSN+Y+RLG WS ASKVR  MKKKNLTKVPGCSWIELE
Sbjct: 541 IGELIAKHLMRMDSCNSSSYVLLSNIYSRLGLWSAASKVRMTMKKKNLTKVPGCSWIELE 600

Query: 601 GVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVDCKC 639
           GVVHEFLV DKSHPYVSEIYSVLDGFGTSNLQV+DCKC
Sbjct: 601 GVVHEFLVRDKSHPYVSEIYSVLDGFGTSNLQVIDCKC 638

BLAST of Sed0009170 vs. ExPASy TrEMBL
Match: A0A1S3AWC2 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483356 PE=4 SV=1)

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 543/638 (85.11%), Postives = 588/638 (92.16%), Query Frame = 0

Query: 1   MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSP 60
           ML+ ANSCHLW  TPPTL  LRHCETQNDVNQ+HARIIK+G+ K+SSLTT+IIL+SISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENG 120
           HKPLV+F RYVFFTRYAV+RIRR+ L DDPFLWNAV+KSYSHGNDPVRALVLFCMMLENG
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIRRSHLDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENG 120

Query: 121 FCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELAR 180
           FCVD+FSFSLILKACARV LVE GKQIHGLLMKLEIGS+LFLLNCLIAMYLRCG +E AR
Sbjct: 121 FCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFAR 180

Query: 181 QVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDG 240
           QVFD MP++DSVS+NSMIDGYVK G IDLARELFDSMPL DKNLISWNSM+ GF QTKDG
Sbjct: 181 QVFDTMPVQDSVSYNSMIDGYVKSGTIDLARELFDSMPLGDKNLISWNSMLGGFAQTKDG 240

Query: 241 VELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKF 300
           + LALELFEKMPERDLVSWNT+IGGFAKCGRIEFAH LF+RMP+RDVISWSNMIDGYAK 
Sbjct: 241 IGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKL 300

Query: 301 GDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIA 360
           GD++VAR LFDEMP+KDVVA N MMAGYAQNGYYTEALEIF++MQ Q NLSPDETT+V+A
Sbjct: 301 GDIKVARTLFDEMPDKDVVAFNTMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVA 360

Query: 361 LSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGI 420
           LSA+SQLG IEKAAS+H+Y VENG S+ GKV V LIDMYSKCGSIENA  IF  +D+KGI
Sbjct: 361 LSAISQLGHIEKAASMHNYFVENGISVTGKVAVALIDMYSKCGSIENAKLIFDGVDQKGI 420

Query: 421 DHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFEL 480
           DHWNAMISG+ARNGLG+LAF +L+EM RL VKPD ITFIGVLNACAHAGLVKEG+ICFEL
Sbjct: 421 DHWNAMISGMARNGLGKLAFEMLVEMHRLPVKPDGITFIGVLNACAHAGLVKEGLICFEL 480

Query: 481 MRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFA 540
           MRKVH LEPKLQHYGCMVDILGKAGLVEGALKF EEMP EPNDIIWRTLLSACQNHENFA
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFA 540

Query: 541 IGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELE 600
           IGE IA+HLMR+DSCNSSSYVLLSN+Y+RLG WS ASKVR  MKKKNLTKVPGCSWIELE
Sbjct: 541 IGELIAKHLMRMDSCNSSSYVLLSNIYSRLGLWSAASKVRMTMKKKNLTKVPGCSWIELE 600

Query: 601 GVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVDCKC 639
           GVVHEFLV DKSHPYVSEIYSVLDGFGTSNLQV+DCKC
Sbjct: 601 GVVHEFLVRDKSHPYVSEIYSVLDGFGTSNLQVIDCKC 638

BLAST of Sed0009170 vs. ExPASy TrEMBL
Match: A0A6J1ID28 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111472705 PE=4 SV=1)

HSP 1 Score: 1130.9 bits (2924), Expect = 0.0e+00
Identity = 539/628 (85.83%), Postives = 579/628 (92.20%), Query Frame = 0

Query: 4   SANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHKP 63
           + NSCHLW  TP TL  LR CETQNDVNQIHARIIK+G FKDSSL T+IIL+SISSP++P
Sbjct: 22  NCNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPNRP 81

Query: 64  LVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCV 123
           LV+F RYVFFT YAV+RIRRN   DDPFLWNAV+KSYSHGNDP+RALVLFCMMLENGFCV
Sbjct: 82  LVEFARYVFFTSYAVQRIRRNHFVDDPFLWNAVIKSYSHGNDPIRALVLFCMMLENGFCV 141

Query: 124 DRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELARQVF 183
           D+FSFSLILKACARVGLVE GKQIHG LMKLEIGS+LFLLNCLIA+Y+RCG +E+ARQVF
Sbjct: 142 DKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLIALYIRCGEIEVARQVF 201

Query: 184 DRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDGVEL 243
           DRMPM+DSVS+NSMIDGYVKCG++DLARELFDSMPLK+KNLISWNSMI GF QTKDGVEL
Sbjct: 202 DRMPMQDSVSYNSMIDGYVKCGLVDLARELFDSMPLKEKNLISWNSMIGGFAQTKDGVEL 261

Query: 244 ALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKFGDV 303
           ALELFEKMPERDLVSWNT+IGGFAKCGR+EFAH LFDRMP+RDVISWSNMIDGYAK GD+
Sbjct: 262 ALELFEKMPERDLVSWNTIIGGFAKCGRMEFAHHLFDRMPKRDVISWSNMIDGYAKLGDI 321

Query: 304 EVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSA 363
           EVARNLFDEMPEKDVVA NAMMAGY QNGYYTEALEIFY MQ Q NLSP+ETT+ IA SA
Sbjct: 322 EVARNLFDEMPEKDVVAYNAMMAGYTQNGYYTEALEIFYTMQRQRNLSPEETTLAIAFSA 381

Query: 364 VSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHW 423
           VSQLG +EKA S+HSYLVENG SLMGKVGVGLIDMYSKCGSIENAMSIF  ID+KGIDHW
Sbjct: 382 VSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHW 441

Query: 424 NAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRK 483
           NAMISG+ARNGLGELAF +LMEMQRLSV PDDITFIGVLNACAHAGLVKEG ICFELMRK
Sbjct: 442 NAMISGMARNGLGELAFEMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRK 501

Query: 484 VHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGE 543
           VH LEPKLQHYGCMVDILGKAGL+E ALKF EEMP EPNDIIWRTLLSACQNHENF IGE
Sbjct: 502 VHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGE 561

Query: 544 PIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVV 603
           PIA+HLMR+DSCNSSSYVLLSN+Y RLG WS ASKVRTMMKK+ LTK+PGCSWIEL+GVV
Sbjct: 562 PIAKHLMRMDSCNSSSYVLLSNIYTRLGLWSAASKVRTMMKKRKLTKIPGCSWIELKGVV 621

Query: 604 HEFLVHDKSHPYVSEIYSVLDGFGTSNL 632
           HEFLVHDKSHP V+EIY VLDG  TSNL
Sbjct: 622 HEFLVHDKSHPLVTEIYFVLDGCETSNL 649

BLAST of Sed0009170 vs. ExPASy TrEMBL
Match: A0A6J1D128 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016038 PE=4 SV=1)

HSP 1 Score: 1122.5 bits (2902), Expect = 0.0e+00
Identity = 545/639 (85.29%), Postives = 589/639 (92.18%), Query Frame = 0

Query: 1   MLISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSP 60
           M++SANS   W   PPTL  LRHCETQ++VNQIHARIIKSG  K+SSLTTRIIL+SISSP
Sbjct: 1   MVVSANSWQPWPSIPPTL-LLRHCETQSEVNQIHARIIKSGCLKNSSLTTRIILNSISSP 60

Query: 61  HKPLVDFGRYVFFTRYAVRRIRRNQL-YDDPFLWNAVVKSYSHGNDPVRALVLFCMMLEN 120
           H+PLV+F RYVFFTRYAV RIRRN+   DDPFLWNAV+KSYSHGNDP+RALVLFCMMLEN
Sbjct: 61  HRPLVEFARYVFFTRYAVERIRRNRRDDDDPFLWNAVIKSYSHGNDPIRALVLFCMMLEN 120

Query: 121 GFCVDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELA 180
           GF VD+FSFSLILKACARV LVE GKQIHGLLMKLEIGS+LFLLNCLI MYLRCG +E A
Sbjct: 121 GFSVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLITMYLRCGDIEFA 180

Query: 181 RQVFDRMPMRDSVSFNSMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKD 240
           RQVFDRMP +DSVS+NSMIDGYVK GM+D ARELFDSMPL+DKNLISWNSMI GF QT+D
Sbjct: 181 RQVFDRMPRQDSVSYNSMIDGYVKSGMVDSARELFDSMPLEDKNLISWNSMIGGFAQTED 240

Query: 241 GVELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAK 300
           GVE ALELFEKMPERDLVSWNTVIGGFAKCGRIEFAH LF++MPRRDVISWSN+IDGYAK
Sbjct: 241 GVEFALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHSLFNQMPRRDVISWSNLIDGYAK 300

Query: 301 FGDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVI 360
            G++EVARNLFDEMPEKDVVACNAMMAGY QNGY T+AL+IF  MQSQ NLSPD+TT+VI
Sbjct: 301 LGNIEVARNLFDEMPEKDVVACNAMMAGYVQNGYCTKALKIFNMMQSQSNLSPDKTTLVI 360

Query: 361 ALSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKG 420
           ALSAVSQLGRI+KAAS+HSYL+ENG SLMGKVGV LIDMYSKCGSI NAMSIF  I++KG
Sbjct: 361 ALSAVSQLGRIDKAASIHSYLIENGFSLMGKVGVALIDMYSKCGSINNAMSIFEGIEEKG 420

Query: 421 IDHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFE 480
           IDHWNAMISG+ARNGLGE AF +L+EMQ+LSVKPDDITFIGVLNACAHAGLVKEGMICFE
Sbjct: 421 IDHWNAMISGMARNGLGESAFDMLVEMQKLSVKPDDITFIGVLNACAHAGLVKEGMICFE 480

Query: 481 LMRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENF 540
           LMRKVH LEPKLQHYGCMVDILGKAGL+EGALKF EEMP EPNDIIWRTLLSACQNHENF
Sbjct: 481 LMRKVHKLEPKLQHYGCMVDILGKAGLIEGALKFIEEMPIEPNDIIWRTLLSACQNHENF 540

Query: 541 AIGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIEL 600
           AIGE IARHLMR+DSCNSSSYVLLSN+YA LG WS ASKVRTMMKK+NLTKVPG SWIEL
Sbjct: 541 AIGESIARHLMRLDSCNSSSYVLLSNIYAGLGLWSAASKVRTMMKKRNLTKVPGRSWIEL 600

Query: 601 EGVVHEFLVHDKSHPYVSEIYSVLDGFGTSNLQVVDCKC 639
           EGVVHEFLVHDKSHP+V+EIYSVLDG GTSNLQV+DCKC
Sbjct: 601 EGVVHEFLVHDKSHPHVTEIYSVLDGLGTSNLQVIDCKC 638

BLAST of Sed0009170 vs. TAIR 10
Match: AT2G45350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 766.5 bits (1978), Expect = 1.6e-221
Identity = 363/592 (61.32%), Postives = 459/592 (77.53%), Query Frame = 0

Query: 17  TLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHKPLVDFGRYVFFTRY 76
           T+  L  C+T +DVNQIH R+IK+G  K+S+LTTRI+L   SS    L DF R VF   Y
Sbjct: 15  TIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFH-EY 74

Query: 77  AVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCVDRFSFSLILKACA 136
            V      ++ +DPFLWNAV+KS+SHG DP +AL+L C+MLENG  VD+FS SL+LKAC+
Sbjct: 75  HVCSFSFGEV-EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACS 134

Query: 137 RVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELARQVFDRMPMRDSVSFNS 196
           R+G V+ G QIHG L K  + SDLFL NCLI +YL+CG L L+RQ+FDRMP RDSVS+NS
Sbjct: 135 RLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNS 194

Query: 197 MIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDGVELALELFEKMPERDL 256
           MIDGYVKCG+I  ARELFD MP++ KNLISWNSMI+G+ QT DGV++A +LF  MPE+DL
Sbjct: 195 MIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDL 254

Query: 257 VSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKFGDVEVARNLFDEMPEK 316
           +SWN++I G+ K GRIE A  LFD MPRRDV++W+ MIDGYAK G V  A+ LFD+MP +
Sbjct: 255 ISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR 314

Query: 317 DVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSAVSQLGRIEKAASL 376
           DVVA N+MMAGY QN Y+ EALEIF +M+ + +L PD+TT+VI L A++QLGR+ KA  +
Sbjct: 315 DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDM 374

Query: 377 HSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHWNAMISGLARNGLG 436
           H Y+VE    L GK+GV LIDMYSKCGSI++AM +F  I+ K IDHWNAMI GLA +GLG
Sbjct: 375 HLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLG 434

Query: 437 ELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRKVHNLEPKLQHYGC 496
           E AF +L++++RLS+KPDDITF+GVLNAC+H+GLVKEG++CFELMR+ H +EP+LQHYGC
Sbjct: 435 ESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 494

Query: 497 MVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGEPIARHLMRVDSCN 556
           MVDIL ++G +E A    EEMP EPND+IWRT L+AC +H+ F  GE +A+HL+     N
Sbjct: 495 MVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYN 554

Query: 557 SSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVVHEFLV 609
            SSYVLLSN+YA  G W    +VRTMMK++ + K+PGCSWIEL+G VHEF V
Sbjct: 555 PSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604

BLAST of Sed0009170 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 441.4 bits (1134), Expect = 1.2e-123
Identity = 233/619 (37.64%), Postives = 371/619 (59.94%), Query Frame = 0

Query: 16  PTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHKPLVDFGRYVFFTR 75
           P+L  L +C+T   +  IHA++IK G    +   +++I   I SPH   + +   VF T 
Sbjct: 35  PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT- 94

Query: 76  YAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCVDRFSFSLILKAC 135
                I+   L     +WN + + ++  +DPV AL L+  M+  G   + ++F  +LK+C
Sbjct: 95  -----IQEPNL----LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 154

Query: 136 ARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELARQVFDRMPMRDSVSFN 195
           A+    + G+QIHG ++KL    DL++   LI+MY++ G LE A +VFD+ P RD VS+ 
Sbjct: 155 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 214

Query: 196 SMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDGVELALELFEKMPER- 255
           ++I GY   G I+ A++LFD +P+KD  ++SWN+MI+G+ +T +  E ALELF+ M +  
Sbjct: 215 ALIKGYASRGYIENAQKLFDEIPVKD--VVSWNAMISGYAETGNYKE-ALELFKDMMKTN 274

Query: 256 ---DLVSWNTVIGGFAKCGRIEFAHRLF----DRMPRRDVISWSNMIDGYAKFGDVEVAR 315
              D  +  TV+   A+ G IE   ++     D     ++   + +ID Y+K G++E A 
Sbjct: 275 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 334

Query: 316 NLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSAVSQL 375
            LF+ +P KDV++ N ++ GY     Y EAL +F EM  +   +P++ T++  L A + L
Sbjct: 335 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM-LRSGETPNDVTMLSILPACAHL 394

Query: 376 GRIEKAASLHSYLVE--NGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHWNA 435
           G I+    +H Y+ +   G +    +   LIDMY+KCG IE A  +F SI  K +  WNA
Sbjct: 395 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 454

Query: 436 MISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRKVH 495
           MI G A +G  + +F +   M+++ ++PDDITF+G+L+AC+H+G++  G   F  M + +
Sbjct: 455 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 514

Query: 496 NLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGEPI 555
            + PKL+HYGCM+D+LG +GL + A +    M  EP+ +IW +LL AC+ H N  +GE  
Sbjct: 515 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 574

Query: 556 ARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVVHE 615
           A +L++++  N  SYVLLSN+YA  G+W+  +K R ++  K + KVPGCS IE++ VVHE
Sbjct: 575 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 634

Query: 616 FLVHDKSHPYVSEIYSVLD 625
           F++ DK HP   EIY +L+
Sbjct: 635 FIIGDKFHPRNREIYGMLE 639

BLAST of Sed0009170 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 435.3 bits (1118), Expect = 8.7e-122
Identity = 225/616 (36.53%), Postives = 353/616 (57.31%), Query Frame = 0

Query: 18  LQFLRHCETQNDVNQIHARIIKSGHFKD----SSLTTRIILDSISSPHKPLVDFGRYVFF 77
           +  +  C +   + Q H  +I++G F D    S L     L S +S     +++ R VF 
Sbjct: 34  ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS-----LEYARKVF- 93

Query: 78  TRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCV-DRFSFSLIL 137
                  I +     + F WN ++++Y+ G DPV ++  F  M+    C  ++++F  ++
Sbjct: 94  -----DEIPK----PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 153

Query: 138 KACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELARQVFDRMPMRDSV 197
           KA A V  +  G+ +HG+ +K  +GSD+F+ N LI  Y  CG L+ A +VF  +  +D V
Sbjct: 154 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 213

Query: 198 SFNSMIDGYVKCGMIDLARELFDSMPLKD-----KNLISWNSMIAGFVQTKDGVELALEL 257
           S+NSMI+G+V+ G  D A ELF  M  +D       ++   S  A     + G ++   +
Sbjct: 214 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 273

Query: 258 FEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKFGDVEVAR 317
            E     +L   N ++  + KCG IE A RLFD M  +D ++W+ M+DGYA   D E AR
Sbjct: 274 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 333

Query: 318 NLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSAVSQL 377
            + + MP+KD+VA NA+++ Y QNG   EAL +F+E+Q Q N+  ++ T+V  LSA +Q+
Sbjct: 334 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 393

Query: 378 GRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHWNAMI 437
           G +E    +HSY+ ++G  +   V   LI MYSKCG +E +  +F S++K+ +  W+AMI
Sbjct: 394 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 453

Query: 438 SGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRKVHNL 497
            GLA +G G  A  +  +MQ  +VKP+ +TF  V  AC+H GLV E    F  M   + +
Sbjct: 454 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 513

Query: 498 EPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGEPIAR 557
            P+ +HY C+VD+LG++G +E A+KF E MP  P+  +W  LL AC+ H N  + E    
Sbjct: 514 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT 573

Query: 558 HLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVVHEFL 617
            L+ ++  N  ++VLLSN+YA+LG+W   S++R  M+   L K PGCS IE++G++HEFL
Sbjct: 574 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 633

Query: 618 VHDKSHPYVSEIYSVL 624
             D +HP   ++Y  L
Sbjct: 634 SGDNAHPMSEKVYGKL 634

BLAST of Sed0009170 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 412.1 bits (1058), Expect = 7.9e-115
Identity = 231/636 (36.32%), Postives = 351/636 (55.19%), Query Frame = 0

Query: 3   ISANSCHLWLPTPPTLQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHK 62
           I+ NS H ++   P L  L  C+    + QI A++I +G   D   ++R+I     S   
Sbjct: 42  INWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE-- 101

Query: 63  PLVDFGRYVFFTRYAVRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFC 122
                 RY+ ++   ++ I    +    F WN  ++ +S   +P  + +L+  ML +G C
Sbjct: 102 -----SRYLDYSVKILKGIENPNI----FSWNVTIRGFSESENPKESFLLYKQMLRHGCC 161

Query: 123 ---VDRFSFSLILKACARVGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLELA 182
               D F++ ++ K CA + L   G  I G ++KL +     + N  I M+  CG +E A
Sbjct: 162 ESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENA 221

Query: 183 RQVFDRMPMRDSVSFNSMIDGYVKCGMIDLA---RELFDSMPLKDKN-----LISWNSMI 242
           R+VFD  P+RD VS+N +I+GY K G  + A    +L +S  +K  +     L+S  SM+
Sbjct: 222 RKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSML 281

Query: 243 AGFVQTKDGVELALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWS 302
               + K+  E   E   +M    +   N ++  F+KCG I  A R+FD + +R ++SW+
Sbjct: 282 GDLNRGKEFYEYVKENGLRM---TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWT 341

Query: 303 NMIDGYAKFGDVEVARNLFDEMPEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLS 362
            MI GYA+ G ++V+R LFD+M EKDVV  NAM+ G  Q     +AL +F EMQ+  N  
Sbjct: 342 TMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS-NTK 401

Query: 363 PDETTVVIALSAVSQLGRIEKAASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSI 422
           PDE T++  LSA SQLG ++    +H Y+ +   SL   +G  L+DMY+KCG+I  A+S+
Sbjct: 402 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 461

Query: 423 FGSIDKKGIDHWNAMISGLARNGLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLV 482
           F  I  +    + A+I GLA +G    A +   EM    + PD+ITFIG+L+AC H G++
Sbjct: 462 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 521

Query: 483 KEGMICFELMRKVHNLEPKLQHYGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLS 542
           + G   F  M+   NL P+L+HY  MVD+LG+AGL+E A +  E MP E +  +W  LL 
Sbjct: 522 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLF 581

Query: 543 ACQNHENFAIGEPIARHLMRVDSCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKV 602
            C+ H N  +GE  A+ L+ +D  +S  YVLL  +Y     W  A + R MM ++ + K+
Sbjct: 582 GCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKI 641

Query: 603 PGCSWIELEGVVHEFLVHDKSHPYVSEIYSVLDGFG 628
           PGCS IE+ G+V EF+V DKS P   +IY  L   G
Sbjct: 642 PGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLG 662

BLAST of Sed0009170 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 409.8 bits (1052), Expect = 3.9e-114
Identity = 219/610 (35.90%), Postives = 342/610 (56.07%), Query Frame = 0

Query: 18  LQFLRHCETQNDVNQIHARIIKSGHFKDSSLTTRIILDSISSPHKPLVDFGRYVFFTRYA 77
           LQ L  C   N V Q+HA+II+    +D  +  ++I  ++S   +           T  A
Sbjct: 23  LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLI-SALSLCRQ-----------TNLA 82

Query: 78  VRRIRRNQLYDDPFLWNAVVKSYSHGNDPVRALVLFCMMLENGFCVDRFSFSLILKACAR 137
           VR   + Q   +  L N+++++++  + P +A  +F  M   G   D F++  +LKAC+ 
Sbjct: 83  VRVFNQVQ-EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 142

Query: 138 VGLVEHGKQIHGLLMKLEIGSDLFLLNCLIAMYLRCGGLEL--ARQVFDRMPMRDSVSFN 197
              +   K +H  + KL + SD+++ N LI  Y RCGGL +  A ++F++M  RD+VS+N
Sbjct: 143 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 202

Query: 198 SMIDGYVKCGMIDLARELFDSMPLKDKNLISWNSMIAGFVQTKDGVELALELFEKMPERD 257
           SM+ G VK G +  AR LFD                                  +MP+RD
Sbjct: 203 SMLGGLVKAGELRDARRLFD----------------------------------EMPQRD 262

Query: 258 LVSWNTVIGGFAKCGRIEFAHRLFDRMPRRDVISWSNMIDGYAKFGDVEVARNLFDEM-- 317
           L+SWNT++ G+A+C  +  A  LF++MP R+ +SWS M+ GY+K GD+E+AR +FD+M  
Sbjct: 263 LISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 322

Query: 318 PEKDVVACNAMMAGYAQNGYYTEALEIFYEMQSQCNLSPDETTVVIALSAVSQLGRIEKA 377
           P K+VV    ++AGYA+ G   EA  +  +M +   L  D   V+  L+A ++ G +   
Sbjct: 323 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS-GLKFDAAAVISILAACTESGLLSLG 382

Query: 378 ASLHSYLVENGCSLMGKVGVGLIDMYSKCGSIENAMSIFGSIDKKGIDHWNAMISGLARN 437
             +HS L  +       V   L+DMY+KCG+++ A  +F  I KK +  WN M+ GL  +
Sbjct: 383 MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVH 442

Query: 438 GLGELAFAVLMEMQRLSVKPDDITFIGVLNACAHAGLVKEGMICFELMRKVHNLEPKLQH 497
           G G+ A  +   M+R  ++PD +TFI VL +C HAGL+ EG+  F  M KV++L P+++H
Sbjct: 443 GHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH 502

Query: 498 YGCMVDILGKAGLVEGALKFTEEMPFEPNDIIWRTLLSACQNHENFAIGEPIARHLMRVD 557
           YGC+VD+LG+ G ++ A+K  + MP EPN +IW  LL AC+ H    I + +  +L+++D
Sbjct: 503 YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 562

Query: 558 SCNSSSYVLLSNVYARLGQWSTASKVRTMMKKKNLTKVPGCSWIELEGVVHEFLVHDKSH 617
            C+  +Y LLSN+YA    W   + +R+ MK   + K  G S +ELE  +HEF V DKSH
Sbjct: 563 PCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSH 584

Query: 618 PYVSEIYSVL 624
           P   +IY +L
Sbjct: 623 PKSDQIYQML 584

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038877671.10.0e+0086.09pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Benincasa ... [more]
XP_004133915.10.0e+0084.80pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucumis sa... [more]
KAG7028669.10.0e+0085.71Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
KAG6597201.10.0e+0085.98Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_008438168.10.0e+0085.11PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic ... [more]
Match NameE-valueIdentityDescription
O221372.3e-22061.32Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidop... [more]
Q9LN011.7e-12237.64Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823801.2e-12036.53Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9SJZ31.1e-11336.32Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
Q9LS725.5e-11335.90Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0L4E10.0e+0084.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126180 PE=4 SV=1[more]
A0A5A7TZK80.0e+0085.11Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AWC20.0e+0085.11pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucumis ... [more]
A0A6J1ID280.0e+0085.83pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucurbit... [more]
A0A6J1D1280.0e+0085.29pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Momordic... [more]
Match NameE-valueIdentityDescription
AT2G45350.11.6e-22161.32Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08070.11.2e-12337.64Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.18.7e-12236.53Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G22410.17.9e-11536.32SLOW GROWTH 1 [more]
AT3G29230.13.9e-11435.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 192..218
e-value: 9.4E-8
score: 31.8
coord: 225..255
e-value: 0.0089
score: 16.2
coord: 559..587
e-value: 0.58
score: 10.5
coord: 164..189
e-value: 0.042
score: 14.1
coord: 395..420
e-value: 0.026
score: 14.8
coord: 257..286
e-value: 2.7E-7
score: 30.4
coord: 92..121
e-value: 0.0013
score: 18.8
coord: 494..517
e-value: 0.041
score: 14.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 316..363
e-value: 9.8E-10
score: 38.5
coord: 423..466
e-value: 2.5E-11
score: 43.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 423..454
e-value: 1.4E-6
score: 26.1
coord: 225..257
e-value: 2.3E-4
score: 19.1
coord: 92..124
e-value: 2.9E-5
score: 21.9
coord: 257..287
e-value: 9.8E-7
score: 26.6
coord: 288..319
e-value: 3.7E-6
score: 24.8
coord: 319..354
e-value: 1.1E-7
score: 29.6
coord: 192..217
e-value: 4.2E-7
score: 27.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 419..453
score: 10.303679
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 190..224
score: 10.972319
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 89..123
score: 9.448698
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..289
score: 11.761533
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 317..347
score: 10.303679
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 163..285
e-value: 1.1E-30
score: 109.1
coord: 393..613
e-value: 1.2E-39
score: 138.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 286..391
e-value: 4.5E-24
score: 86.8
coord: 17..162
e-value: 1.5E-10
score: 42.7
NoneNo IPR availablePANTHERPTHR47928:SF67REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 240..624
coord: 1..173
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 175..217
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 207..237
NoneNo IPR availablePANTHERPTHR47928:SF67REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 175..217
coord: 207..237
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 240..624
coord: 1..173

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0009170.1Sed0009170.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1900865 chloroplast RNA modification
biological_process GO:0016556 mRNA modification
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding