Sed0009150 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATATCCCTTTCTGTGTAAAGTTCATATAGAGACCCCCTTATCCCCTTCTCTCTTTCTCTACCAGAAAAGTCAGTACCCATCGCCCAACCGCCGCCGGTTGGTACCACCAAACCCTAATCCCTGACCGTCACCGGAGCAAGATCCGAAATCTCCGCCACGACGGAGTGGTGACGGATGGAGGTTCTGCTCGGTCCTCCGTCGTATGCTCCGCCGCCCACGCCGTACTCCGCCGCATCTCTCTCGCCGGATACTCCCTCCGCCGACGCGGAGACGCTTAATCCGTCCGGTTCGGCTCTCCGCGAGTCCGGATCTGGTAGTTCGATCGGCGAAAACTCGTCGGAGAGCTCGTCGTCGATTGGAGTTCCGGACGATGAGTCCGATGATGGAGTTCAGAGCAAGGCGAAGGAGGAAGGAGGATTATGCGGATTAGATTCGCTCGAAGACGCTCTTCCAATCAAGTAAGTTTCTCTAAATCCCTATCTCTCAAATTTCGCCCTAGAAAATCGTAATCATAGCCGAAAACGGCGATTGAACTCTGAAATCTGCGATTAACGACACGAATTGAAGATTGAACTCTTCAATTTCCGATTCATTACACGAATTGAAGATTTCGCGGTGTGTATTGTGATGAACATTGTCAGAAGGGGATTATCGAGGCATTTCTCGGGGAAATCGAAGTCGTTTGCGAGTTTATCAGACGCGATTGAGGTGAAGGATTTGGAGAAGCCGGAGAATGCATTCAACAAGAGGAGAAGGATTGTCATGGCGTCGAAATGGTCGAGAAGAGGCTCGTTCTACAACTGGCCGAACCCTAAATCGATGCCGCTGCTAGCTCTGAACGAAGACGAAGACGAAGAAGAAGAAGAAGAAGAAACAAAACAGGTTGAGGTTTCAGTTTCAGATTCAGATTCAGATTCAGAAGTGAAGGATCGAAGAAGACGAAGTGTAGGGCAAAGGTTCAAATCCATGAGCTGTTTTGATCTGCAAGAGTATGAACAGCAATGATTTGTTCTTCACTTTTCCAAATCTTCTCTCTAAAACAAACTATATTTTACCTTTTCTATTTTTTTTTTTTATGTTTGTAGATAAGTTAATAATATAGATTTTATCTTTTTTTCTTTTTTTTTTGCTTGGACTTTATCTAGTTGCTGTGTATAATTATATTTTATCCAATGTATATGTATATATATTGTCGTGTCGTGTTTGAATGATTTATTACTTGATTGCTTTACCGAC AAATATCCCTTTCTGTGTAAAGTTCATATAGAGACCCCCTTATCCCCTTCTCTCTTTCTCTACCAGAAAAGTCAGTACCCATCGCCCAACCGCCGCCGGTTGGTACCACCAAACCCTAATCCCTGACCGTCACCGGAGCAAGATCCGAAATCTCCGCCACGACGGAGTGGTGACGGATGGAGGTTCTGCTCGGTCCTCCGTCGTATGCTCCGCCGCCCACGCCGTACTCCGCCGCATCTCTCTCGCCGGATACTCCCTCCGCCGACGCGGAGACGCTTAATCCGTCCGGTTCGGCTCTCCGCGAGTCCGGATCTGGTAGTTCGATCGGCGAAAACTCGTCGGAGAGCTCGTCGTCGATTGGAGTTCCGGACGATGAGTCCGATGATGGAGTTCAGAGCAAGGCGAAGGAGGAAGGAGGATTATGCGGATTAGATTCGCTCGAAGACGCTCTTCCAATCAAAAGGGGATTATCGAGGCATTTCTCGGGGAAATCGAAGTCGTTTGCGAGTTTATCAGACGCGATTGAGGTGAAGGATTTGGAGAAGCCGGAGAATGCATTCAACAAGAGGAGAAGGATTGTCATGGCGTCGAAATGGTCGAGAAGAGGCTCGTTCTACAACTGGCCGAACCCTAAATCGATGCCGCTGCTAGCTCTGAACGAAGACGAAGACGAAGAAGAAGAAGAAGAAGAAACAAAACAGGTTGAGGTTTCAGTTTCAGATTCAGATTCAGATTCAGAAGTGAAGGATCGAAGAAGACGAAGTGTAGGGCAAAGGTTCAAATCCATGAGCTGTTTTGATCTGCAAGAGTATGAACAGCAATGATTTGTTCTTCACTTTTCCAAATCTTCTCTCTAAAACAAACTATATTTTACCTTTTCTATTTTTTTTTTTTATGTTTGTAGATAAGTTAATAATATAGATTTTATCTTTTTTTCTTTTTTTTTTGCTTGGACTTTATCTAGTTGCTGTGTATAATTATATTTTATCCAATGTATATGTATATATATTGTCGTGTCGTGTTTGAATGATTTATTACTTGATTGCTTTACCGAC ATGGAGGTTCTGCTCGGTCCTCCGTCGTATGCTCCGCCGCCCACGCCGTACTCCGCCGCATCTCTCTCGCCGGATACTCCCTCCGCCGACGCGGAGACGCTTAATCCGTCCGGTTCGGCTCTCCGCGAGTCCGGATCTGGTAGTTCGATCGGCGAAAACTCGTCGGAGAGCTCGTCGTCGATTGGAGTTCCGGACGATGAGTCCGATGATGGAGTTCAGAGCAAGGCGAAGGAGGAAGGAGGATTATGCGGATTAGATTCGCTCGAAGACGCTCTTCCAATCAAAAGGGGATTATCGAGGCATTTCTCGGGGAAATCGAAGTCGTTTGCGAGTTTATCAGACGCGATTGAGGTGAAGGATTTGGAGAAGCCGGAGAATGCATTCAACAAGAGGAGAAGGATTGTCATGGCGTCGAAATGGTCGAGAAGAGGCTCGTTCTACAACTGGCCGAACCCTAAATCGATGCCGCTGCTAGCTCTGAACGAAGACGAAGACGAAGAAGAAGAAGAAGAAGAAACAAAACAGGTTGAGGTTTCAGTTTCAGATTCAGATTCAGATTCAGAAGTGAAGGATCGAAGAAGACGAAGTGTAGGGCAAAGGTTCAAATCCATGAGCTGTTTTGATCTGCAAGAGTATGAACAGCAATGA MEVLLGPPSYAPPPTPYSAASLSPDTPSADAETLNPSGSALRESGSGSSIGENSSESSSSIGVPDDESDDGVQSKAKEEGGLCGLDSLEDALPIKRGLSRHFSGKSKSFASLSDAIEVKDLEKPENAFNKRRRIVMASKWSRRGSFYNWPNPKSMPLLALNEDEDEEEEEEETKQVEVSVSDSDSDSEVKDRRRRSVGQRFKSMSCFDLQEYEQQ Homology
BLAST of Sed0009150 vs. NCBI nr
Match: XP_038898503.1 (uncharacterized protein LOC120086121 [Benincasa hispida]) HSP 1 Score: 243.0 bits (619), Expect = 2.3e-60 Identity = 150/232 (64.66%), Postives = 172/232 (74.14%), Query Frame = 0
BLAST of Sed0009150 vs. NCBI nr
Match: XP_004136309.2 (uncharacterized protein LOC101218277 [Cucumis sativus] >KGN60173.1 hypothetical protein Csa_002443 [Cucumis sativus]) HSP 1 Score: 237.7 bits (605), Expect = 9.6e-59 Identity = 155/234 (66.24%), Postives = 175/234 (74.79%), Query Frame = 0
BLAST of Sed0009150 vs. NCBI nr
Match: XP_008466301.1 (PREDICTED: uncharacterized protein LOC103503753 [Cucumis melo]) HSP 1 Score: 236.1 bits (601), Expect = 2.8e-58 Identity = 152/233 (65.24%), Postives = 175/233 (75.11%), Query Frame = 0
BLAST of Sed0009150 vs. NCBI nr
Match: XP_022137206.1 (transcription initiation factor TFIID subunit 7-like [Momordica charantia]) HSP 1 Score: 231.9 bits (590), Expect = 5.3e-57 Identity = 144/238 (60.50%), Postives = 172/238 (72.27%), Query Frame = 0
BLAST of Sed0009150 vs. NCBI nr
Match: XP_022981755.1 (uncharacterized protein LOC111480811 [Cucurbita maxima]) HSP 1 Score: 231.1 bits (588), Expect = 9.0e-57 Identity = 145/226 (64.16%), Postives = 170/226 (75.22%), Query Frame = 0
BLAST of Sed0009150 vs. ExPASy TrEMBL
Match: A0A0A0LEH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881860 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 4.7e-59 Identity = 155/234 (66.24%), Postives = 175/234 (74.79%), Query Frame = 0
BLAST of Sed0009150 vs. ExPASy TrEMBL
Match: A0A1S3CQX1 (uncharacterized protein LOC103503753 OS=Cucumis melo OX=3656 GN=LOC103503753 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 1.4e-58 Identity = 152/233 (65.24%), Postives = 175/233 (75.11%), Query Frame = 0
BLAST of Sed0009150 vs. ExPASy TrEMBL
Match: A0A6J1C5V2 (transcription initiation factor TFIID subunit 7-like OS=Momordica charantia OX=3673 GN=LOC111008707 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 2.6e-57 Identity = 144/238 (60.50%), Postives = 172/238 (72.27%), Query Frame = 0
BLAST of Sed0009150 vs. ExPASy TrEMBL
Match: A0A6J1J0I5 (uncharacterized protein LOC111480811 OS=Cucurbita maxima OX=3661 GN=LOC111480811 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 4.4e-57 Identity = 145/226 (64.16%), Postives = 170/226 (75.22%), Query Frame = 0
BLAST of Sed0009150 vs. ExPASy TrEMBL
Match: A0A6J1FKY0 (uncharacterized protein LOC111446357 OS=Cucurbita moschata OX=3662 GN=LOC111446357 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 5.7e-57 Identity = 145/225 (64.44%), Postives = 170/225 (75.56%), Query Frame = 0
BLAST of Sed0009150 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 110.5 bits (275), Expect = 1.7e-24 Identity = 88/230 (38.26%), Postives = 130/230 (56.52%), Query Frame = 0
BLAST of Sed0009150 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 102.4 bits (254), Expect = 4.5e-22 Identity = 81/191 (42.41%), Postives = 107/191 (56.02%), Query Frame = 0
BLAST of Sed0009150 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 93.6 bits (231), Expect = 2.1e-19 Identity = 67/169 (39.64%), Postives = 97/169 (57.40%), Query Frame = 0
BLAST of Sed0009150 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 5.5e-12 Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 0
BLAST of Sed0009150 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 3.0e-10 Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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