Sed0009130 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGCATTTGGCTTACAAGGAGCAGCCACTTCTTATGATTGGGAGTTTTGTGAGCAGTATATGGAGGATATCAAATCAGTTTCTACAAGGCTTCAGGTGGATGCTATCTTGGCAGCCACCTAGGGACCATATATTGAAAATCAATACTGAAAATCTATATAGATGTGGAATTGGGGTGATTGTGCGTAACAAGAAGGGAGAGGTAATGTTCTCTTCTTGTTGAACGATTGCAGGAATTGTGGATTCAGAAATTGTCGAAGCTTTAGCGGTTCAAGAGGGAGTATCAATGGTTGTGGATTTGGGTTTCAGGGAGGTTGAAGTGGAAACAGATGCATCTCGTGTTCCTTCTTTTCTTCAAAAATGCGAGTTTAGTAGAACTGAAGTGGGTTTTATCATAGACGAGACTTTGTCCTTAGCTGCAGCATTAACGAAGGTATCCTTTTCATGGTGTGCAAGAGATGCCAACGGTCTTGCTCATCACCTAGCTCGTATGGCAGCAGAAGAAGTTTTGAATGCTAATTGGATGGAAGATGTTCCAGAGAATCTCAGAGAAGATTACATAATTGAAATGACGAATTCTCTTGTCCAAGAAAGGGAAGAGAGTCTCCTACCTTAA ATGAGGCATTTGGCTTACAAGGAGCAGCCACTTCTTATGATTGGGAGTTTTGTGAGCAGAATTGTGGATTCAGAAATTGTCGAAGCTTTAGCGGTTCAAGAGGGAGTATCAATGGTTGTGGATTTGGGTTTCAGGGAGGTTGAAGTGGAAACAGATGCATCTCGTGTTCCTTCTTTTCTTCAAAAATGCGAGTTTAGTAGAACTGAAGTGGGTTTTATCATAGACGAGACTTTGTCCTTAGCTGCAGCATTAACGAAGGTATCCTTTTCATGGTGTGCAAGAGATGCCAACGGTCTTGCTCATCACCTAGCTCGTATGGCAGCAGAAGAAGTTTTGAATGCTAATTGGATGGAAGATGTTCCAGAGAATCTCAGAGAAGATTACATAATTGAAATGACGAATTCTCTTGTCCAAGAAAGGGAAGAGAGTCTCCTACCTTAA ATGAGGCATTTGGCTTACAAGGAGCAGCCACTTCTTATGATTGGGAGTTTTGTGAGCAGAATTGTGGATTCAGAAATTGTCGAAGCTTTAGCGGTTCAAGAGGGAGTATCAATGGTTGTGGATTTGGGTTTCAGGGAGGTTGAAGTGGAAACAGATGCATCTCGTGTTCCTTCTTTTCTTCAAAAATGCGAGTTTAGTAGAACTGAAGTGGGTTTTATCATAGACGAGACTTTGTCCTTAGCTGCAGCATTAACGAAGGTATCCTTTTCATGGTGTGCAAGAGATGCCAACGGTCTTGCTCATCACCTAGCTCGTATGGCAGCAGAAGAAGTTTTGAATGCTAATTGGATGGAAGATGTTCCAGAGAATCTCAGAGAAGATTACATAATTGAAATGACGAATTCTCTTGTCCAAGAAAGGGAAGAGAGTCTCCTACCTTAA MRHLAYKEQPLLMIGSFVSRIVDSEIVEALAVQEGVSMVVDLGFREVEVETDASRVPSFLQKCEFSRTEVGFIIDETLSLAAALTKVSFSWCARDANGLAHHLARMAAEEVLNANWMEDVPENLREDYIIEMTNSLVQEREESLLP Homology
BLAST of Sed0009130 vs. NCBI nr
Match: XP_021744937.1 (uncharacterized protein LOC110710901 [Chenopodium quinoa]) HSP 1 Score: 68.9 bits (167), Expect = 4.0e-08 Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of Sed0009130 vs. NCBI nr
Match: XP_021747929.1 (uncharacterized protein LOC110713793 [Chenopodium quinoa]) HSP 1 Score: 68.6 bits (166), Expect = 5.2e-08 Identity = 37/115 (32.17%), Postives = 68/115 (59.13%), Query Frame = 0
BLAST of Sed0009130 vs. NCBI nr
Match: KAG2565207.1 (hypothetical protein PVAP13_7NG002334 [Panicum virgatum]) HSP 1 Score: 68.2 bits (165), Expect = 6.9e-08 Identity = 34/118 (28.81%), Postives = 65/118 (55.08%), Query Frame = 0
BLAST of Sed0009130 vs. NCBI nr
Match: XP_023892531.1 (uncharacterized protein LOC112004513 [Quercus suber]) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-07 Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 0
BLAST of Sed0009130 vs. NCBI nr
Match: KAF5945963.1 (hypothetical protein HYC85_016191 [Camellia sinensis]) HSP 1 Score: 65.5 bits (158), Expect = 4.4e-07 Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Sed0009130 vs. ExPASy TrEMBL
Match: A0A803KQ76 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 6.7e-09 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 0
BLAST of Sed0009130 vs. ExPASy TrEMBL
Match: A0A2N9EK22 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2801 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.9e-08 Identity = 40/105 (38.10%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of Sed0009130 vs. ExPASy TrEMBL
Match: A0A803MB59 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.5e-08 Identity = 36/113 (31.86%), Postives = 66/113 (58.41%), Query Frame = 0
BLAST of Sed0009130 vs. ExPASy TrEMBL
Match: A0A2N9GYK3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32597 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.5e-08 Identity = 40/105 (38.10%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of Sed0009130 vs. ExPASy TrEMBL
Match: A0A2N9EQW7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4942 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 9.7e-08 Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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