Sed0009072 (gene) Chayote v1

Overview
NameSed0009072
Typegene
OrganismSechium edule (Chayote v1)
DescriptionEmbryo defective
LocationLG04: 43526489 .. 43529292 (-)
RNA-Seq ExpressionSed0009072
SyntenySed0009072
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCGGGTCGGGCTCGGGAGTAAGGCTTCCCAAAAACCCTCCCACAGATACCAAATTCCTGTATCGCCGATTAATTTCCGAATCCATGTCGTCGGCGACACTAATCGTCGGCCTTTCTTCAAACGTAGCCCTAAAGCTTCCTCGTCTCACTCCCATTTCATCGTCCCGTTTATCCCATCGACCCCAAACCCTAAACGCTCCATGTTCTTTCTCCCCTCTCAAAATTCAGCCCATTTCCCACAAACCCACAAGAATTTTCTATGGTTTATCGCATAATCTTAGTGGGTTTTTCATTTCCAGGAACTTGAAATCTTTCGCTGTCTCTGCCGGAGATGGTGAAGCTCAGAACGGTGATACAGGGGAGAGTACTATGCCGGAGCGCTTCAGGTACTTGACCAAAGAAGCTCCTGATCCTCCTCTGAGGTGGCCTTTCTTTGTCGGTAATTTCTTTACTCTTTACAATTTTCTTACTTGTTTTGATGGTTTTGAATCTCTGTTTTCTTAGTAAAAACACTTCATGTCAGTCTAATCTTGCTGGTGAGTTTGCTATTGTTGAATTGGTAGAAAAGATTGTGAAAAATTTTCAGATTTTGAAGGCCCCATTTGATAACCATTTCGTTTTTTGTTTTTGGTTTATGAAATTTAAGTTTACAACAACTATTTTACCGTGACTTTTTTCTTATTTGGATATCTACATCTTACCTATATTTTAAGAAATAAAACCAAAATTTGGAAATAAAAAAAAGTAGCTTTAAAACCTTGTTTTTGTCTTTGAAATTTGGTTAGTATTCACTACTTTCTTAAGGAAAGACGGATACATTGTAGGAAAGATGGAGATAGAAAATTTGAGTAGAAATAAGCTTAAATTTTATAAAACAAAAACAAAAAACCAAATGGCTATTAAACGGGGCCTAAATGAATCACCCATGCTTATACAATGGCGTCTAATTTTGTAAACTCTTTGCAGTTCTGGTTGGATTTAGTTTGTTGATAAAATTCTTTTTGGAATTTCATTCATTGTCACGTGGGCATCTCTGTATCTGCAATGATTTTTTTAAGCTATACAGGCTGTTTTCATTTGATTGCATAGGCTGTGTTTTAAACTTGACACTGAACATGTTTGATATGTCATTTGTCCAAACTATTCAATGCGTTTAGGAGTTTTGTTATCTTTAGGTTTCCTTCAATCATATGTATATATAATGTACTGAATTCATATTCGTGGGATCTGTTTGAATCTTGTTCATTAACATTTCTTTCTGATAAAGAAAATTAGTTAGCTTAACCTGGTTCGATAATTATTTGGATTTTGAGGATTTAGCCTAAAAATACTACTCTCATCTAAAGTTTCTGTGTTTTGTTATCTGCATTTATGGTTTATATATGGTTTTTAAAAATCAAACCAAGTTTTGAAGGAAAAAAAAGCAGCTTTCAATTTTTTTTATTTTATCTTTTTCGAGTTTTACTAATAAGTTCAAATACTTTCCTAAGAAATATGGATCACATTGTAGGGAAATGATATGAAAACAATCCAGGAAAAGATAAACAATTTAACTTGTTCATGGGTCAAGAGGGCCTTAGAAAACTAATTGATGGGTTCAATCTATGATGGCTATCTTTCTAGGAATTAATTTCCTACGAGTTTCTTTGACATCCAAATATTGTAGGGTCAGGTGGTATGTCCCGTGACACTAGTTGAGATGCACAAAAGCAAGGATAGTCACGGATTAAAAAAGTGCAGATTTTGTATCTGTCTTTTGGCCTAAACCATACTTCCCACAGTATTAGCAGCTTCTTTTTTCTGCCTCGTTCTCTGTCACCAACAGAATACTTCAACATTGTTTATATGAGTACTCGTTCGTCTATCCTATAATATAATCGATATCGTTATTGGAAGATGAATTTCTGTCTCACCTTTGATTATTATGCAGCTCTGGTGTTTATTCTCTATGCTTGGAGAGCAGTCTTGTTTGAACTTGGTAACTGGAGAAAGGCTGTTCTTGGCATCTTTCGTTTTGTGGGATACTTATTGAAAGGTGCCTTGGCCCTCACCCTCTATGTTATCGGAGATCCTATCACTTCTTTGATAAGAGGCATTGAAACTGCATTTTACACGATTCGATCTTTCTACTCGAGCATTCTCGCATATGCTCCCGTTCCTGAATTGACTACAATAATCGTACTAGCTTCGGCCGTTCTTGCAATTTCAGAAGCCAGTGCCCCTGATTCTGTCAGCAGTCAACCATATCTCCTAACGATATCTGGCCTTGCTGGCTATGCAGCCGTGCGAAGTTACATTTCCGAGCCGTTCTTCTGGACGATTCTTTTATGTCTATACGGATTCTCTCGGTTTGTCAAAAAGAGAGACGATGTAACTTCTGCATTGCCCGCAGCTGCTGTTTTTGCTGCCATTGGAGAGCCATGGGTGAGAATCTTGGCTGTTGGTTCATTTCTAGCTTTGGCCATTTATGAACATTGGAAGAAGCTTTCACAAGGAAAGAAAGAAGATGAAGAAGCTGTGTATGAGAGAGGTGTTCCATTGCCTCTTGTGGGTGCAGCCTTAGCTATTGGAATCCATGCTGCTGCCAAATGGGCTGGATATAGACACTTAACCTGGATGATTGCATGAACACAAAGAACTTCAATTTTGATTTGAGTTTGTGAATGTAATTAATTAGTGTTATGCATTGGTGTAACAGTGGAGCTTATGCTTATGAAGATGATGGTTTCAAAAGAAAAAACCTTTTATTTTATCTTTTTATTTATAGTTTGAATATTGTCGAGAGTCTTTCTAGTTTAATCAGC

mRNA sequence

GTCGGGTCGGGCTCGGGAGTAAGGCTTCCCAAAAACCCTCCCACAGATACCAAATTCCTGTATCGCCGATTAATTTCCGAATCCATGTCGTCGGCGACACTAATCGTCGGCCTTTCTTCAAACGTAGCCCTAAAGCTTCCTCGTCTCACTCCCATTTCATCGTCCCGTTTATCCCATCGACCCCAAACCCTAAACGCTCCATGTTCTTTCTCCCCTCTCAAAATTCAGCCCATTTCCCACAAACCCACAAGAATTTTCTATGGTTTATCGCATAATCTTAGTGGGTTTTTCATTTCCAGGAACTTGAAATCTTTCGCTGTCTCTGCCGGAGATGGTGAAGCTCAGAACGGTGATACAGGGGAGAGTACTATGCCGGAGCGCTTCAGGTACTTGACCAAAGAAGCTCCTGATCCTCCTCTGAGGTGGCCTTTCTTTGTCGCTCTGGTGTTTATTCTCTATGCTTGGAGAGCAGTCTTGTTTGAACTTGGTAACTGGAGAAAGGCTGTTCTTGGCATCTTTCGTTTTGTGGGATACTTATTGAAAGGTGCCTTGGCCCTCACCCTCTATGTTATCGGAGATCCTATCACTTCTTTGATAAGAGGCATTGAAACTGCATTTTACACGATTCGATCTTTCTACTCGAGCATTCTCGCATATGCTCCCGTTCCTGAATTGACTACAATAATCGTACTAGCTTCGGCCGTTCTTGCAATTTCAGAAGCCAGTGCCCCTGATTCTGTCAGCAGTCAACCATATCTCCTAACGATATCTGGCCTTGCTGGCTATGCAGCCGTGCGAAGTTACATTTCCGAGCCGTTCTTCTGGACGATTCTTTTATGTCTATACGGATTCTCTCGGTTTGTCAAAAAGAGAGACGATGTAACTTCTGCATTGCCCGCAGCTGCTGTTTTTGCTGCCATTGGAGAGCCATGGGTGAGAATCTTGGCTGTTGGTTCATTTCTAGCTTTGGCCATTTATGAACATTGGAAGAAGCTTTCACAAGGAAAGAAAGAAGATGAAGAAGCTGTGTATGAGAGAGGTGTTCCATTGCCTCTTGTGGGTGCAGCCTTAGCTATTGGAATCCATGCTGCTGCCAAATGGGCTGGATATAGACACTTAACCTGGATGATTGCATGAACACAAAGAACTTCAATTTTGATTTGAGTTTGTGAATGTAATTAATTAGTGTTATGCATTGGTGTAACAGTGGAGCTTATGCTTATGAAGATGATGGTTTCAAAAGAAAAAACCTTTTATTTTATCTTTTTATTTATAGTTTGAATATTGTCGAGAGTCTTTCTAGTTTAATCAGC

Coding sequence (CDS)

ATGTCGTCGGCGACACTAATCGTCGGCCTTTCTTCAAACGTAGCCCTAAAGCTTCCTCGTCTCACTCCCATTTCATCGTCCCGTTTATCCCATCGACCCCAAACCCTAAACGCTCCATGTTCTTTCTCCCCTCTCAAAATTCAGCCCATTTCCCACAAACCCACAAGAATTTTCTATGGTTTATCGCATAATCTTAGTGGGTTTTTCATTTCCAGGAACTTGAAATCTTTCGCTGTCTCTGCCGGAGATGGTGAAGCTCAGAACGGTGATACAGGGGAGAGTACTATGCCGGAGCGCTTCAGGTACTTGACCAAAGAAGCTCCTGATCCTCCTCTGAGGTGGCCTTTCTTTGTCGCTCTGGTGTTTATTCTCTATGCTTGGAGAGCAGTCTTGTTTGAACTTGGTAACTGGAGAAAGGCTGTTCTTGGCATCTTTCGTTTTGTGGGATACTTATTGAAAGGTGCCTTGGCCCTCACCCTCTATGTTATCGGAGATCCTATCACTTCTTTGATAAGAGGCATTGAAACTGCATTTTACACGATTCGATCTTTCTACTCGAGCATTCTCGCATATGCTCCCGTTCCTGAATTGACTACAATAATCGTACTAGCTTCGGCCGTTCTTGCAATTTCAGAAGCCAGTGCCCCTGATTCTGTCAGCAGTCAACCATATCTCCTAACGATATCTGGCCTTGCTGGCTATGCAGCCGTGCGAAGTTACATTTCCGAGCCGTTCTTCTGGACGATTCTTTTATGTCTATACGGATTCTCTCGGTTTGTCAAAAAGAGAGACGATGTAACTTCTGCATTGCCCGCAGCTGCTGTTTTTGCTGCCATTGGAGAGCCATGGGTGAGAATCTTGGCTGTTGGTTCATTTCTAGCTTTGGCCATTTATGAACATTGGAAGAAGCTTTCACAAGGAAAGAAAGAAGATGAAGAAGCTGTGTATGAGAGAGGTGTTCCATTGCCTCTTGTGGGTGCAGCCTTAGCTATTGGAATCCATGCTGCTGCCAAATGGGCTGGATATAGACACTTAACCTGGATGATTGCATGA

Protein sequence

MSSATLIVGLSSNVALKLPRLTPISSSRLSHRPQTLNAPCSFSPLKIQPISHKPTRIFYGLSHNLSGFFISRNLKSFAVSAGDGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVFILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIRSFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYISEPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWKKLSQGKKEDEEAVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMIA
Homology
[Close]
BLAST of Sed0009072 vs. NCBI nr
Match: XP_022147809.1 (uncharacterized protein LOC111016656 [Momordica charantia])

HSP 1 Score: 537.0 bits (1382), Expect = 1.2e-148
Identity = 285/356 (80.06%), Postives = 303/356 (85.11%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRP--QTLNAPCSFSPLKIQPISHKPTRIFYG 62
           S  LI GLSSN+ALKLP LT ISSSRL  RP  Q  N P S SPLKIQ + HKP R    
Sbjct: 2   STALIAGLSSNLALKLPLLTAISSSRLRVRPQNQNQNVPFSCSPLKIQSLWHKPARDCNV 61

Query: 63  LSHNLSGFFISRNLKSFAVSAGD---GEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFF 122
           LSHNL    ISR L SF VSAGD    EAQN + GESTMPERFRYLTKEAPDPP+RWPFF
Sbjct: 62  LSHNLIASLISRKLGSFTVSAGDAAASEAQNDERGESTMPERFRYLTKEAPDPPVRWPFF 121

Query: 123 VALVFILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETA 182
           VAL FI+YAWRAVLFEL NWRK VLGIFRFVGYLLKG+LAL  YVIGDPITS+IRG+ETA
Sbjct: 122 VALAFIIYAWRAVLFELANWRKLVLGIFRFVGYLLKGSLALVFYVIGDPITSMIRGMETA 181

Query: 183 FYTIRSFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAV 242
           FYTIRSFYS I+AYAPVPELTTIIVLASAVLAISEAS PDS+SSQPYLLTISGLAGYAAV
Sbjct: 182 FYTIRSFYSGIVAYAPVPELTTIIVLASAVLAISEASVPDSISSQPYLLTISGLAGYAAV 241

Query: 243 RSYISEPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAI 302
           R YISEPFFWTILLC+Y FSRF+KKRDDVTSALPAAA FAAIGEPWVRILA+GSF+ALAI
Sbjct: 242 RGYISEPFFWTILLCVYSFSRFIKKRDDVTSALPAAATFAAIGEPWVRILALGSFMALAI 301

Query: 303 YEHWKKLSQGKK----EDEEAVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
             HWKKLS+GKK    EDEEAV +RGVPLPL+G ALAIGI +AAKWAGYRHLTWMI
Sbjct: 302 SHHWKKLSEGKKEDKVEDEEAVNQRGVPLPLLGVALAIGIRSAAKWAGYRHLTWMI 357

[Close]
BLAST of Sed0009072 vs. NCBI nr
Match: XP_038906583.1 (uncharacterized protein LOC120092540 isoform X1 [Benincasa hispida])

HSP 1 Score: 535.0 bits (1377), Expect = 4.7e-148
Identity = 282/351 (80.34%), Postives = 300/351 (85.47%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRPQTLNAPCSFSPLKIQPISHKPTRIFYGLS 62
           + TLI GLSSN  LK P L+ ISSS L+ RPQT NAP S  P KIQ +   P R    LS
Sbjct: 2   ATTLISGLSSN--LKPPLLSAISSSPLTLRPQTQNAPFSNFPFKIQNLWLNPARNSNVLS 61

Query: 63  HNLSGFFISRNLKSFAVSAGDGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVF 122
           HN SGF ISR L+SF V AGD EAQN D GESTMPERFRYLTKEAPDPP+RWPFFVAL F
Sbjct: 62  HNRSGFLISRKLESFTVFAGDSEAQNDDRGESTMPERFRYLTKEAPDPPVRWPFFVALAF 121

Query: 123 ILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIR 182
           ILYAWRAVLFEL NWRKAV G+F FVGY+LKGALAL LYVIGDPITS+IRGIETAFYTIR
Sbjct: 122 ILYAWRAVLFELANWRKAVFGVFGFVGYILKGALALVLYVIGDPITSMIRGIETAFYTIR 181

Query: 183 SFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYIS 242
           SFYS I+AYAP+PELTTII+LAS VLAISEASAPDSVSSQPYLLTISGLAGY  VR YIS
Sbjct: 182 SFYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYTVVRGYIS 241

Query: 243 EPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWK 302
           EPFFWTILLC+YGFSRFVKKR+DVTSALP AAVFAAIGEPWVRILA+GSFLALAI  HWK
Sbjct: 242 EPFFWTILLCVYGFSRFVKKRNDVTSALPVAAVFAAIGEPWVRILAMGSFLALAIAHHWK 301

Query: 303 KLSQGKK----EDEEAVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
           KLSQGKK    EDE+ VY+R VPLPL+G ALAIGIHAAAKWAGYRHLTWMI
Sbjct: 302 KLSQGKKEDEYEDEKGVYQRDVPLPLLGVALAIGIHAAAKWAGYRHLTWMI 350

[Close]
BLAST of Sed0009072 vs. NCBI nr
Match: KAG6579373.1 (hypothetical protein SDJN03_23821, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 512.7 bits (1319), Expect = 2.5e-141
Identity = 270/347 (77.81%), Postives = 294/347 (84.73%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRPQTLNAPCSFSPLKIQPISHKPTRIFYGLS 62
           +  LI GLSS   LKLP LT ISSS L+ RP++ N     SP KI  I +KPTR    LS
Sbjct: 2   ATALIAGLSS--TLKLPLLTAISSSPLNFRPKSQNVQFCSSPYKIHTIWNKPTRNCNVLS 61

Query: 63  HNLSGFFISRNLKSFAVSAGDGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVF 122
           HNLSGF ISR L  F VSAG  E QN D  E TMPERFRYLTKEAPDPP+RWPFFVAL F
Sbjct: 62  HNLSGFLISRGLGPFTVSAGAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAF 121

Query: 123 ILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIR 182
           ILYAWRAV FELGNWRKAVL IF FVGY+LKGALAL LYVIGDPITS+IRGIET FYTIR
Sbjct: 122 ILYAWRAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIR 181

Query: 183 SFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYIS 242
           SFYSS++AYAPVPELTT+I+LAS V+AISEAS PDSVS+QPYLLT+SGLA YAAVR+YIS
Sbjct: 182 SFYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYIS 241

Query: 243 EPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWK 302
           EPFFWTILL +Y FS+FVKKRDDVTSALPAAAVFAAIGEPWVRILA+GSF+ LAI+ HWK
Sbjct: 242 EPFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWK 301

Query: 303 KLSQGKKEDEEAVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
           K+SQG KE EE VYER VP+PL+GAALAIGIHAAAKWAGYRHLTWMI
Sbjct: 302 KVSQG-KEREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMI 345

[Close]
BLAST of Sed0009072 vs. NCBI nr
Match: XP_022922438.1 (uncharacterized protein LOC111430430 [Cucurbita moschata])

HSP 1 Score: 511.9 bits (1317), Expect = 4.3e-141
Identity = 269/347 (77.52%), Postives = 295/347 (85.01%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRPQTLNAPCSFSPLKIQPISHKPTRIFYGLS 62
           +  LI GLSS   LKLP LT ISSS L+ RP++ N     SP KI  I +KPTR    LS
Sbjct: 2   ATALIAGLSS--TLKLPLLTAISSSPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLS 61

Query: 63  HNLSGFFISRNLKSFAVSAGDGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVF 122
           HNLSGF ISR+L  F VSAG  E QN D  E TMPERFRYLTKEAPDPP+RWPFFVAL F
Sbjct: 62  HNLSGFLISRSLGPFTVSAGAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAF 121

Query: 123 ILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIR 182
           ILYAW+AV FELGNWRKAVL IF FVGY+LKGALAL LYVIGDPITS+IRGIET FYTIR
Sbjct: 122 ILYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIR 181

Query: 183 SFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYIS 242
           SFYSS++AYAPVPELTT+I+LAS V+AISEAS PDSVS+QPYLLT+SGLA YAAVR+YIS
Sbjct: 182 SFYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYIS 241

Query: 243 EPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWK 302
           EPFFWTILL +Y FS+FVKKRDDVTSALPAAAVFAAIGEPWVRILA+GSF+ LAI+ HWK
Sbjct: 242 EPFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWK 301

Query: 303 KLSQGKKEDEEAVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
           K+SQG KE EE VYER VP+PL+GAALAIGIHAAAKWAGYRHLTWMI
Sbjct: 302 KVSQG-KEREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMI 345

[Close]
BLAST of Sed0009072 vs. NCBI nr
Match: XP_022973013.1 (uncharacterized protein LOC111471530 [Cucurbita maxima])

HSP 1 Score: 511.9 bits (1317), Expect = 4.3e-141
Identity = 268/347 (77.23%), Postives = 294/347 (84.73%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRPQTLNAPCSFSPLKIQPISHKPTRIFYGLS 62
           +  LI GLSS   LKLP LT ISSS L+ RP++ N     SP KI  I +KPTR    LS
Sbjct: 2   ATALIAGLSS--TLKLPLLTAISSSPLNFRPKSQNVQFCSSPYKIHTIWNKPTRNCNVLS 61

Query: 63  HNLSGFFISRNLKSFAVSAGDGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVF 122
           HNLSGF ISR+L SF  SAG  E QN D  E TMPERFRYLTKEAPDPP+RWPFFVAL F
Sbjct: 62  HNLSGFLISRSLGSFTASAGAVEPQNNDREEGTMPERFRYLTKEAPDPPVRWPFFVALAF 121

Query: 123 ILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIR 182
           ILYAWRAV FELGNWRKAVL IF FVGY+LKGALAL LYVIGDPITS+IRGIET FYTIR
Sbjct: 122 ILYAWRAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIR 181

Query: 183 SFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYIS 242
           SFYSS++AYAPVPELTT+I+LAS V+AISEAS PDSVS+QPYLLT+SGLAGY AVR+YIS
Sbjct: 182 SFYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLAGYTAVRAYIS 241

Query: 243 EPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWK 302
           EPFFWT LL +Y FS+FVKKRDDVTSALPAAAVFAAIGEPWVRILA+GSF+ LAI+ HWK
Sbjct: 242 EPFFWTFLLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWK 301

Query: 303 KLSQGKKEDEEAVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
           K+SQG KE EE +YER VP+PL+GAALAIGIHAAAKWAGYRHLTWMI
Sbjct: 302 KVSQG-KEREEGMYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMI 345

[Close]
BLAST of Sed0009072 vs. ExPASy TrEMBL
Match: A0A6J1D242 (uncharacterized protein LOC111016656 OS=Momordica charantia OX=3673 GN=LOC111016656 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 6.0e-149
Identity = 285/356 (80.06%), Postives = 303/356 (85.11%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRP--QTLNAPCSFSPLKIQPISHKPTRIFYG 62
           S  LI GLSSN+ALKLP LT ISSSRL  RP  Q  N P S SPLKIQ + HKP R    
Sbjct: 2   STALIAGLSSNLALKLPLLTAISSSRLRVRPQNQNQNVPFSCSPLKIQSLWHKPARDCNV 61

Query: 63  LSHNLSGFFISRNLKSFAVSAGD---GEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFF 122
           LSHNL    ISR L SF VSAGD    EAQN + GESTMPERFRYLTKEAPDPP+RWPFF
Sbjct: 62  LSHNLIASLISRKLGSFTVSAGDAAASEAQNDERGESTMPERFRYLTKEAPDPPVRWPFF 121

Query: 123 VALVFILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETA 182
           VAL FI+YAWRAVLFEL NWRK VLGIFRFVGYLLKG+LAL  YVIGDPITS+IRG+ETA
Sbjct: 122 VALAFIIYAWRAVLFELANWRKLVLGIFRFVGYLLKGSLALVFYVIGDPITSMIRGMETA 181

Query: 183 FYTIRSFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAV 242
           FYTIRSFYS I+AYAPVPELTTIIVLASAVLAISEAS PDS+SSQPYLLTISGLAGYAAV
Sbjct: 182 FYTIRSFYSGIVAYAPVPELTTIIVLASAVLAISEASVPDSISSQPYLLTISGLAGYAAV 241

Query: 243 RSYISEPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAI 302
           R YISEPFFWTILLC+Y FSRF+KKRDDVTSALPAAA FAAIGEPWVRILA+GSF+ALAI
Sbjct: 242 RGYISEPFFWTILLCVYSFSRFIKKRDDVTSALPAAATFAAIGEPWVRILALGSFMALAI 301

Query: 303 YEHWKKLSQGKK----EDEEAVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
             HWKKLS+GKK    EDEEAV +RGVPLPL+G ALAIGI +AAKWAGYRHLTWMI
Sbjct: 302 SHHWKKLSEGKKEDKVEDEEAVNQRGVPLPLLGVALAIGIRSAAKWAGYRHLTWMI 357

[Close]
BLAST of Sed0009072 vs. ExPASy TrEMBL
Match: A0A6J1IBT2 (uncharacterized protein LOC111471530 OS=Cucurbita maxima OX=3661 GN=LOC111471530 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.1e-141
Identity = 268/347 (77.23%), Postives = 294/347 (84.73%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRPQTLNAPCSFSPLKIQPISHKPTRIFYGLS 62
           +  LI GLSS   LKLP LT ISSS L+ RP++ N     SP KI  I +KPTR    LS
Sbjct: 2   ATALIAGLSS--TLKLPLLTAISSSPLNFRPKSQNVQFCSSPYKIHTIWNKPTRNCNVLS 61

Query: 63  HNLSGFFISRNLKSFAVSAGDGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVF 122
           HNLSGF ISR+L SF  SAG  E QN D  E TMPERFRYLTKEAPDPP+RWPFFVAL F
Sbjct: 62  HNLSGFLISRSLGSFTASAGAVEPQNNDREEGTMPERFRYLTKEAPDPPVRWPFFVALAF 121

Query: 123 ILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIR 182
           ILYAWRAV FELGNWRKAVL IF FVGY+LKGALAL LYVIGDPITS+IRGIET FYTIR
Sbjct: 122 ILYAWRAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIR 181

Query: 183 SFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYIS 242
           SFYSS++AYAPVPELTT+I+LAS V+AISEAS PDSVS+QPYLLT+SGLAGY AVR+YIS
Sbjct: 182 SFYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLAGYTAVRAYIS 241

Query: 243 EPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWK 302
           EPFFWT LL +Y FS+FVKKRDDVTSALPAAAVFAAIGEPWVRILA+GSF+ LAI+ HWK
Sbjct: 242 EPFFWTFLLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWK 301

Query: 303 KLSQGKKEDEEAVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
           K+SQG KE EE +YER VP+PL+GAALAIGIHAAAKWAGYRHLTWMI
Sbjct: 302 KVSQG-KEREEGMYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMI 345

[Close]
BLAST of Sed0009072 vs. ExPASy TrEMBL
Match: A0A6J1E6L3 (uncharacterized protein LOC111430430 OS=Cucurbita moschata OX=3662 GN=LOC111430430 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.1e-141
Identity = 269/347 (77.52%), Postives = 295/347 (85.01%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRPQTLNAPCSFSPLKIQPISHKPTRIFYGLS 62
           +  LI GLSS   LKLP LT ISSS L+ RP++ N     SP KI  I +KPTR    LS
Sbjct: 2   ATALIAGLSS--TLKLPLLTAISSSPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLS 61

Query: 63  HNLSGFFISRNLKSFAVSAGDGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVF 122
           HNLSGF ISR+L  F VSAG  E QN D  E TMPERFRYLTKEAPDPP+RWPFFVAL F
Sbjct: 62  HNLSGFLISRSLGPFTVSAGAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAF 121

Query: 123 ILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIR 182
           ILYAW+AV FELGNWRKAVL IF FVGY+LKGALAL LYVIGDPITS+IRGIET FYTIR
Sbjct: 122 ILYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIR 181

Query: 183 SFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYIS 242
           SFYSS++AYAPVPELTT+I+LAS V+AISEAS PDSVS+QPYLLT+SGLA YAAVR+YIS
Sbjct: 182 SFYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYIS 241

Query: 243 EPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWK 302
           EPFFWTILL +Y FS+FVKKRDDVTSALPAAAVFAAIGEPWVRILA+GSF+ LAI+ HWK
Sbjct: 242 EPFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWK 301

Query: 303 KLSQGKKEDEEAVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
           K+SQG KE EE VYER VP+PL+GAALAIGIHAAAKWAGYRHLTWMI
Sbjct: 302 KVSQG-KEREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMI 345

[Close]
BLAST of Sed0009072 vs. ExPASy TrEMBL
Match: A0A1S3ATW7 (uncharacterized protein LOC103482911 OS=Cucumis melo OX=3656 GN=LOC103482911 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.3e-140
Identity = 270/349 (77.36%), Postives = 294/349 (84.24%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRPQTLNAPCSFSPLKIQPISHKPTRIFYGLS 62
           + +LI  LSSN  LKLP L+ ISSS  + R QT   P S SP KIQ +   PTR    LS
Sbjct: 2   ATSLIAALSSN--LKLPILSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLS 61

Query: 63  HNLSGFFISRNLKSFAVSAGDGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVF 122
           HN SGF ISR L+SF V A D EAQ+ D  EST+PERFRYLTKEAPDPP+RWPFFVAL F
Sbjct: 62  HNRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPF 121

Query: 123 ILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIR 182
           +LYAWRAVLFELGNWRK V+ +F FV  +LKGALAL LYVIGDPITS+IRGIETAFYTIR
Sbjct: 122 LLYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIR 181

Query: 183 SFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYIS 242
           SFYSSI+AYAP+PELTTIIVLASA+LAISEASAPDSVSSQPYLLT+SGLAGY AVR YIS
Sbjct: 182 SFYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYIS 241

Query: 243 EPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWK 302
           EPFFWTILLC+YG+S FVKKR+DVTSALPAA VFAAIGEPWVRILA+GSFLALAI  HWK
Sbjct: 242 EPFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWK 301

Query: 303 KLSQGKKEDEE--AVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
           KLSQGKKEDE+   VY   VPLPL+G ALAIGIHAAAKWAGYRHLTWMI
Sbjct: 302 KLSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMI 348

[Close]
BLAST of Sed0009072 vs. ExPASy TrEMBL
Match: A0A0A0KM42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141030 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 7.9e-133
Identity = 262/349 (75.07%), Postives = 286/349 (81.95%), Query Frame = 0 

Query: 3   SATLIVGLSSNVALKLPRLTPISSSRLSHRPQTLNAPCSFSPLKIQPISHKPTRIFYGLS 62
           + TLI  LSSN  LKLP L+ ISSS  + R QT   P S SP  IQ +   PTR    +S
Sbjct: 2   ATTLIASLSSN--LKLPLLSAISSSPSTFRRQTQTVPFSNSP--IQTLWLNPTRNCNVIS 61

Query: 63  HNLSGFFISRNLKSFAVSAGDGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVF 122
           HN SGF ISR L+SF V A D EAQ+ D  ESTMPERFRYL KE  DPP+RWPFFVAL F
Sbjct: 62  HNRSGFLISRKLESFTVFAADFEAQSDDREESTMPERFRYLAKEGSDPPVRWPFFVALPF 121

Query: 123 ILYAWRAVLFELGNWRKAVLGIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIR 182
           +LYAWRAVLFELGNWRK V+ +  FV  LLKGALAL LYVIGDPITS+IRGIETAFYTIR
Sbjct: 122 LLYAWRAVLFELGNWRKIVVNLVGFVVSLLKGALALILYVIGDPITSVIRGIETAFYTIR 181

Query: 183 SFYSSILAYAPVPELTTIIVLASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYIS 242
           SF+SSI+AYAPV ELTTII+LAS VLAISEASAPDSV SQPYLLT+SGLAGYAAVR YIS
Sbjct: 182 SFHSSIVAYAPVSELTTIIILASTVLAISEASAPDSVRSQPYLLTLSGLAGYAAVRGYIS 241

Query: 243 EPFFWTILLCLYGFSRFVKKRDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWK 302
           EPFFWTILLC+YG+S FVKKR+DV+SALPAAAVFAAIGEPWVRILA+GSFLALAI  HWK
Sbjct: 242 EPFFWTILLCVYGYSSFVKKRNDVSSALPAAAVFAAIGEPWVRILAMGSFLALAITHHWK 301

Query: 303 KLSQGKKEDEE--AVYERGVPLPLVGAALAIGIHAAAKWAGYRHLTWMI 350
            LSQGKKEDE+   VY   +PLPL+G ALAIGIH AAKWAGYRHLTWMI
Sbjct: 302 NLSQGKKEDEDEKGVYRWDIPLPLLGVALAIGIHGAAKWAGYRHLTWMI 346

[Close]
BLAST of Sed0009072 vs. TAIR 10
Match: AT4G28210.1 (embryo defective 1923 )

HSP 1 Score: 347.8 bits (891), Expect = 1.0e-95
Identity = 174/267 (65.17%), Postives = 213/267 (79.78%), Query Frame = 0 

Query: 83  DGEAQNGDTGESTMPERFRYLTKEAPDPPLRWPFFVALVFILYAWRAVLFELGNWRKAVL 142
           + +A+     ESTMP+RFRYLTKEAPD P+ WP+FVAL F++YAWRAVLFEL NWRKA  
Sbjct: 84  EDDAERFARRESTMPDRFRYLTKEAPDSPIIWPWFVALGFLVYAWRAVLFELSNWRKAAF 143

Query: 143 GIFRFVGYLLKGALALTLYVIGDPITSLIRGIETAFYTIRSFYSSILAYAPVPELTTIIV 202
            I  FVG L K ALAL  + IGDPITSLI  +ETA Y++R+FYS I+AY PV ELTT+I+
Sbjct: 144 AILAFVGDLSKFALALVFHFIGDPITSLISLVETAMYSVRAFYSGIVAYTPVRELTTVIL 203

Query: 203 LASAVLAISEASAPDSVSSQPYLLTISGLAGYAAVRSYISEPFFWTILLCLYGFSRFVKK 262
           LAS+VLAI EA AP+S+S QPY++TI+GL GYAAV+SYISEPFFWT+LL LYG+SR +KK
Sbjct: 204 LASSVLAIGEAVAPESISKQPYVVTIAGLVGYAAVQSYISEPFFWTVLLGLYGYSRLIKK 263

Query: 263 RDDVTSALPAAAVFAAIGEPWVRILAVGSFLALAIYEHWKKLSQGKKEDEEAVYERGVPL 322
           RDDVTSALP+AAV A +GEPWVR++A+  +LALA+Y +  K S    E+E  +  R  P+
Sbjct: 264 RDDVTSALPSAAVLAGVGEPWVRVVAITGYLALAMYHNSTKTS---SEEESQILRRAPPM 323

Query: 323 PLVGAALAIGIHAAAKWAGYRHLTWMI 350
           PL+ AALAIG+  AAKWAGYRHLTWMI
Sbjct: 324 PLLAAALAIGVRLAAKWAGYRHLTWMI 347

The following BLAST results are available for this feature:
BLAST of Sed0009072 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022147809.11.2e-14880.06uncharacterized protein LOC111016656 [Momordica charantia][more]
XP_038906583.14.7e-14880.34uncharacterized protein LOC120092540 isoform X1 [Benincasa hispida][more]
KAG6579373.12.5e-14177.81hypothetical protein SDJN03_23821, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022922438.14.3e-14177.52uncharacterized protein LOC111430430 [Cucurbita moschata][more]
XP_022973013.14.3e-14177.23uncharacterized protein LOC111471530 [Cucurbita maxima][more]
BLAST of Sed0009072 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0009072 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D2426.0e-14980.06uncharacterized protein LOC111016656 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1IBT22.1e-14177.23uncharacterized protein LOC111471530 OS=Cucurbita maxima OX=3661 GN=LOC111471530... [more]
A0A6J1E6L32.1e-14177.52uncharacterized protein LOC111430430 OS=Cucurbita moschata OX=3662 GN=LOC1114304... [more]
A0A1S3ATW72.3e-14077.36uncharacterized protein LOC103482911 OS=Cucumis melo OX=3656 GN=LOC103482911 PE=... [more]
A0A0A0KM427.9e-13375.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141030 PE=4 SV=1[more]
BLAST of Sed0009072 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G28210.11.0e-9565.17embryo defective 1923 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0009072.1Sed0009072.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009409 response to cold
cellular_component GO:0016021 integral component of membrane