Sed0009042 (gene) Chayote v1

Overview


Name	Sed0009042
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein CutA
Location	LG04: 1335529 .. 1338600 (+)
RNA-Seq Expression	Sed0009042
Synteny	Sed0009042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCGCTCTCTGCAGCAGAGCCGCGACTCCATTGCTATCGTCTTCTTCGATACGACGTCGTTTACCGCTGGTTGGCGCGTTTTGCGTACTGAGCTTCGGATTCTCCAATCTCTTCATCTCCAGAACGGGTTCCGCTCTCTCTCTGCCGTTCTTCCCTCTCTTGAGGTACTTCTTTTCGATTCTTGCTGTGAATTTGCTCTGTACTGAAGGATTTGTTTATGTTCTTTGATTGTTGATCCGTTTTCTGATGGAAAATGTTTATCAGATCGAAGTTTGGCGGTCAAGGACCGGCTAGGAACGTCCATTTGATTAAGATGGAAGGAAGTAGTGCAGCTGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAATAGGGAAGCAGGTTTTGTTCTATCTCTTTGTGCGTTATTTGAGGTTTTGAGTTAATTGATTACTTATTGTTGTTTTGTACGTTTGGATAACTATGATCGGTATATCGGATTGCGATGGATGTTTGTAATCGCTATAATTTATGTTTGTGGTTTCCGGTATCTTCTATACGGCTTTGACTTGGTCTTTTTCAGTCAATGTAGGTGATAAGCCTATCAGGCTGATTTTAGCAGCGTACATTTTGGTTAATGGTAATGTTGTGGTGTATTGATCGAATCGTATTGGAGTTGGCGATATGGTTTTAGTGTTGTTCTTGTTATGTTAGTAACATCTTCACTATAAGACGGTGTTGGTGAAAACTTATGTTGGCTACTGATGGAGTTGAGTGGATTTTGATCATCTTGTTGATTATGTGTTAGGTATACTTAGTGTATTGTACGAATAATTATCAGCCCCCCGGTAAACAAGTGATGAGTTGTAGCTCAACTAGATTTTATTGTAATGGTTGCAGAACTGTCCGGTTATTTTTCTTTCCACTCATGTGGGTGAATAATGTTCTGAGATAGTAAGCTTTGAGTAGCCCAGAGTACTAAGTATTGAATTTGTATTACTCCCCCTTTGAAATATATAACAAATTTGTGGAATTGGTATGAAAATTTTTTGGACTATGAAATACTCTACCAGTCCACCTCTAATTTTTCATACAAAAGATTCTAGGACCATAAGGCCTTTTGTTTTCTTAATTTTTCTTTCTTTCTATTATTCAGTTTCAACATCTTTATTTCCTTTTTTAGTGTGCTCTATTAGAATGAGTCCAATCCAACTTTTCATATTCATTTGCATTATGTTTTCTTGTTTTTTTTTTTGTGTCCACATATTTATATATTTCTTAGAAAGAAAATGACATATCAAACCATATAAATTAAGTGTCTTGCAAGTGTTGGAACAATGTCTGGCGCATAGTCTGTTGCATAAGACTGATTTTTCATAGTCTGCAGGTAAGAAATTGGCAGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATCGTACCTGGTATGTGCATTTCCTCAACCTCTGCTCGTCAGCTTAAAGTCACAGAATGCATTGCTCACAGTTTGTCAAAGATATCATGCCGACAATATTTATAATTCATTCTTAAATAATATTATCCTCTTAAGTTTTCTATTCATATCAATGAAGTTGCTTCTGACCATTGAAAATTGATGCTAACTGGATCTTCCCTTGTTAGAACTACCTTACTTGATCATGTTGGGACAAAATTGCGTTTCTTTTGATCAACTAACACTTGAGATCTTGTGATTTCACACAAGGAACTGATGCTTGAAGACACTTCCACAGCCCTGTTTTATCATTATTATTTCTTCAATTGCCAGCCATTGCCTTCATTTTCTTTTATAGCCTTCTTTTCATTGTATTGCCACTGCTTATGTCAATATGAGTTCTCAGACTTCTTAAATGCAGGTATAGAATCTGTTTACCAGTGGAAGGGAGAGGTACGATTTTTCATTTTCTCCAATTGATATACAGTCATCAAGTATATGATTGCTTGTTTGTCTTGACCAAAAAAGAATTCAACTATAGGCTTTTTGTTTGTGGTTGACACAGATCCAGACAGACCCTGAGGAACTTTTGATTATAAAAACCAGGCAATCACTTCTGGGTGCCCTGACCGATCATGTTAAGGCAAATCACCCATATGAGTAAGCCTTACATTCTTCCTCTGTACTGTATGTTTGCTCGACTATTCTTTTTGTGTTTATTCATTTTCAATATTGGGGGAACAATGGAGCAGAATGGCAAATAGAGTTGTAAACTTTGAACTTTTTTTTGCTTATTGGCTAAAGGGCTAATAGAATTGTAAACTTTGACTGTTTTTGCTTGGCTATAAAATTAAGATTTAAGGGTATTTTTGCTATTTTGTACTTATGCTTATGAGTATTTTGTTATTCTTTTGCTCAACTATTCTTTTTTTGTTTTTGTTACTTTGAACCGTTTTTGCTTATTGGCTAAAGGGGGGTGTTTGTTTGACATATTTAGGTAGGATTTAGGTTAAGGAGTTATATTGAGTAGTTAAAAATCGAGAGTTGTGTCAAAAACTCGTTTGGATGTAGTGTCTGTGTAAGAGGAGTTAGAGTCAAAACCTTGTTTGGATATAGATTTAAATGAGTAGTTATTATTAGTAGTTAAAAAAGAAATGATTAAAAATGAATGGTTAAAAATGAGTTATTTTGAAATGAATGATTAAAAATAAGTGGTTAGAAATGATTTACTAGTTATAAATGAATGATTAAAAATGAATGGTTAGAGTTGAAAGTTATTTTTAAAGTAAATTTGATGAGTTAATAAAAATTCATTTGGATGTAGATTTTCGAAGAGGAGTTAATAAATCCTAAAACTAAATCCTACCTAAATATGTCAAACAAACAGCCCCAAAAAGTCATTAGCAAATGAGATGTTGGTTGTCTGTTTCTTGTTGAACCCTTGGGCCTCGAGTGTTGAGACACTCTTCGTAGTAGGGGTAATCAGGGAGATGTTTTGAAAGCCATATTTTTTTCTCCTTCAAGGATTTACCTCCATTTTTTCCACAGGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCCTCGAGTACCTCGAGTGGATCAAGAGCAGCACAAGGGACTGA

mRNA sequence

ATGGCGTTCGCTCTCTGCAGCAGAGCCGCGACTCCATTGCTATCGTCTTCTTCGATACGACGTCGTTTACCGCTGGTTGGCGCGTTTTGCGTACTGAGCTTCGGATTCTCCAATCTCTTCATCTCCAGAACGGGTTCCGCTCTCTCTCTGCCGTTCTTCCCTCTCTTGAGATCGAAGTTTGGCGGTCAAGGACCGGCTAGGAACGTCCATTTGATTAAGATGGAAGGAAGTAGTGCAGCTGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAATAGGGAAGCAGGTAAGAAATTGGCAGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATCGTACCTGGTATAGAATCTGTTTACCAGTGGAAGGGAGAGATCCAGACAGACCCTGAGGAACTTTTGATTATAAAAACCAGGCAATCACTTCTGGGTGCCCTGACCGATCATGTTAAGGCAAATCACCCATATGAGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCCTCGAGTACCTCGAGTGGATCAAGAGCAGCACAAGGGACTGA

Coding sequence (CDS)

ATGGCGTTCGCTCTCTGCAGCAGAGCCGCGACTCCATTGCTATCGTCTTCTTCGATACGACGTCGTTTACCGCTGGTTGGCGCGTTTTGCGTACTGAGCTTCGGATTCTCCAATCTCTTCATCTCCAGAACGGGTTCCGCTCTCTCTCTGCCGTTCTTCCCTCTCTTGAGATCGAAGTTTGGCGGTCAAGGACCGGCTAGGAACGTCCATTTGATTAAGATGGAAGGAAGTAGTGCAGCTGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAATAGGGAAGCAGGTAAGAAATTGGCAGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATCGTACCTGGTATAGAATCTGTTTACCAGTGGAAGGGAGAGATCCAGACAGACCCTGAGGAACTTTTGATTATAAAAACCAGGCAATCACTTCTGGGTGCCCTGACCGATCATGTTAAGGCAAATCACCCATATGAGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCCTCGAGTACCTCGAGTGGATCAAGAGCAGCACAAGGGACTGA

Protein sequence

MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKFGGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTRD

Homology

[Close]

BLAST of Sed0009042 vs. NCBI nr
Match: XP_022997267.1 (protein CutA, chloroplastic [Cucurbita maxima])

HSP 1 Score: 340.9 bits (873), Expect = 6.9e-90
Identity = 172/185 (92.97%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF LCSR ATPLLS S +RRRLPLVGAFCVLSFGFSNLF+SRTGSALSLPF PLLRS F
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           G QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS+EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSVEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. NCBI nr
Match: XP_023545579.1 (protein CutA, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 171/185 (92.43%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF LCSR ATPLLS S +RRRLPLVGAFCVLSFGFSNLF+S+TGSALSLPF PLLRS F
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSKTGSALSLPFAPLLRSTF 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           G QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS+EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSMEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. NCBI nr
Match: KAG7029661.1 (Protein CutA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338.6 bits (867), Expect = 3.4e-89
Identity = 172/185 (92.97%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF LCSR ATPLLSSS +RRRLPLVGAFCVLS GFSNLF+SRTGSALSLPF PLLRS F
Sbjct: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           G QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. NCBI nr
Match: XP_004152609.1 (protein CutA, chloroplastic [Cucumis sativus] >KGN62736.1 hypothetical protein Csa_022362 [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 4.5e-89
Identity = 170/185 (91.89%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF L SRAATPL++S ++RRRLPLVGAFCVLSFG SNLF+S+TGSALSLPF PLLRSK 
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
            GQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. NCBI nr
Match: XP_008444893.1 (PREDICTED: protein CutA, chloroplastic [Cucumis melo])

HSP 1 Score: 337.4 bits (864), Expect = 7.7e-89
Identity = 169/185 (91.35%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF L SRAATPL+S  ++RRRLPLVGAFCVLSFG SNLF+S+TGSALS+PF PLLRSK 
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
            GQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. ExPASy Swiss-Prot
Match: P93009 (Protein CutA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CUTA PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.4e-54
Identity = 117/185 (63.24%), Postives = 139/185 (75.14%), Query Frame = 0


Query: 5   LCSRAATPLLSSSSIRRRLPLVGAFCVLS-FGFSNLFIS---RTGSALSLPFFPLLRSKF 64
           + S   T L +    RR  P+VGAFCVLS    S+L  S   ++G A S    PLLRSKF
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
             +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 184
           VY+W+G++Q+D EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YLEW+K
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWLK 180

Query: 185 SSTRD 186
           +STR+
Sbjct: 181 NSTRN 182

[Close]

BLAST of Sed0009042 vs. ExPASy Swiss-Prot
Match: Q109R6 (Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CUTA1 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.6e-47
Identity = 102/177 (57.63%), Postives = 121/177 (68.36%), Query Frame = 0


Query: 9   AATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKFGGQGPARN 68
           AA   LS   +RRR P+ GA   LS G                        F G     +
Sbjct: 23  AAAAGLSPLLLRRRAPIAGALLFLSLG-----------------------AFAGVRSLSS 82

Query: 69  VHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEI 128
               +ME +S  VPSIVVYVTVPN+EAGK+LA SI+ EKLAACVNIVPGIESVY W+G++
Sbjct: 83  SASARMESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKV 142

Query: 129 QTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTRD 186
           QTD EELLIIKTR+SLL ALT+HVKANH Y+VPEVIALPI GG+L+YLEW+K+STR+
Sbjct: 143 QTDAEELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 176

[Close]

BLAST of Sed0009042 vs. ExPASy Swiss-Prot
Match: O60888 (Protein CutA OS=Homo sapiens OX=9606 GN=CUTA PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26
Identity = 54/111 (48.65%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 75  EGSSAAVPSIV--VYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQTDP 134
           +  S  VP  V   +VT PN +  K++A ++V+++LAACVN++P I S+Y+WKG+I+ D 
Sbjct: 58  DSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDS 117

Query: 135 EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSST 184
           E L++IKT+ SL+ ALTD V++ HPYEV EVIALP+  G+  YL+W++  T
Sbjct: 118 EVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVT 168

[Close]

BLAST of Sed0009042 vs. ExPASy Swiss-Prot
Match: Q7SIA8 (Divalent-cation tolerance protein CutA OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=cutA PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-25
Identity = 50/99 (50.51%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 85  VVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQTDPEELLIIKTRQSL 144
           VV +TVP+ E  + +A+++V+E+LAACVNIVPG+ S+Y+W+GE+  D E LL++KT    
Sbjct: 4   VVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHA 63

Query: 145 LGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSST 184
              L + VKA HPY VPE++ALPI  G+ EYL+W++ +T
Sbjct: 64  FPKLKERVKALHPYTVPEIVALPIAEGNREYLDWLRENT 102

[Close]

BLAST of Sed0009042 vs. ExPASy Swiss-Prot
Match: P69678 (Protein CutA OS=Bos taurus OX=9913 GN=CUTA PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.6e-25
Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 0


Query: 27  GAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKFGGQGPARNVHLIKMEGSSAAVPSIV- 86
           GA  +LS  +    +      L LP    L S   G  PA+          SA VP  V 
Sbjct: 14  GAALLLSLFWMPTLLPAASRLLLLP--RALLSMASGSPPAQP----SSSSRSAYVPGSVS 73

Query: 87  -VYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQTDPEELLIIKTRQSL 146
             +VT PN +  K++A ++V+++L ACVN+VP I S+Y+WKG+I+ D E L++IKT+ SL
Sbjct: 74  AAFVTCPNEKVAKEIARAVVEKRL-ACVNLVPQITSIYEWKGKIEEDSEVLMMIKTQSSL 133

Query: 147 LGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSST 184
           + ALTD V++ HPYEV EVIALP+  G+  YL+W++  T
Sbjct: 134 VPALTDFVRSVHPYEVAEVIALPVEQGNSPYLQWVRQVT 165

[Close]

BLAST of Sed0009042 vs. ExPASy TrEMBL
Match: A0A6J1K4I7 (protein CutA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492224 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.4e-90
Identity = 172/185 (92.97%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF LCSR ATPLLS S +RRRLPLVGAFCVLSFGFSNLF+SRTGSALSLPF PLLRS F
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           G QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS+EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSVEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. ExPASy TrEMBL
Match: A0A0A0LRU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370360 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 170/185 (91.89%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF L SRAATPL++S ++RRRLPLVGAFCVLSFG SNLF+S+TGSALSLPF PLLRSK 
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
            GQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. ExPASy TrEMBL
Match: A0A1S3BBF3 (protein CutA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488107 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.7e-89
Identity = 169/185 (91.35%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF L SRAATPL+S  ++RRRLPLVGAFCVLSFG SNLF+S+TGSALS+PF PLLRSK 
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
            GQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. ExPASy TrEMBL
Match: A0A6J1HF76 (protein CutA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462991 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 171/185 (92.43%), Postives = 175/185 (94.59%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF LCSR ATPLLSSS +RRRLPLVGAFCVLS GFSNLF+SRTGSALSLPF PLLRS F
Sbjct: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           G QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. ExPASy TrEMBL
Match: A0A5A7VD29 (Protein CutA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004450 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88
Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MAFALCSRAATPLLSSSSIRRRLPLVGAFCVLSFGFSNLFISRTGSALSLPFFPLLRSKF 60
           MAF L SRAATPL+S  ++RRRLPLVGAFCVLSFG SNLF+S+TGSALSLPF PLLRSK 
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
            GQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQTDPEELLIIKTRQSLLGALTDHVKA HPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKAIHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTRD 186
           SST+D
Sbjct: 181 SSTKD 185

[Close]

BLAST of Sed0009042 vs. TAIR 10
Match: AT2G33740.2 (Nitrogen regulatory PII-like, alpha/beta )

HSP 1 Score: 211.8 bits (538), Expect = 4.5e-55
Identity = 117/185 (63.24%), Postives = 139/185 (75.14%), Query Frame = 0


Query: 5   LCSRAATPLLSSSSIRRRLPLVGAFCVLS-FGFSNLFIS---RTGSALSLPFFPLLRSKF 64
           + S   T L +    RR  P+VGAFCVLS    S+L  S   ++G A S    PLLRSKF
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
             +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 184
           VY+W+G++Q+D EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YLEW+K
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWLK 180

Query: 185 SSTRD 186
           +STR+
Sbjct: 181 NSTRN 182

[Close]

BLAST of Sed0009042 vs. TAIR 10
Match: AT2G33740.1 (Nitrogen regulatory PII-like, alpha/beta )

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-42
Identity = 98/159 (61.64%), Postives = 115/159 (72.33%), Query Frame = 0


Query: 5   LCSRAATPLLSSSSIRRRLPLVGAFCVLS-FGFSNLFIS---RTGSALSLPFFPLLRSKF 64
           + S   T L +    RR  P+VGAFCVLS    S+L  S   ++G A S    PLLRSKF
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  GGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
             +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYE 160
           VY+W+G++Q+D EELLIIKTRQSLL  LT+HV ANH YE
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYE 156

The following BLAST results are available for this feature:

BLAST of Sed0009042 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997267.1	6.9e-90	92.97	protein CutA, chloroplastic [Cucurbita maxima]	[more]
XP_023545579.1	1.2e-89	92.43	protein CutA, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG7029661.1	3.4e-89	92.97	Protein CutA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004152609.1	4.5e-89	91.89	protein CutA, chloroplastic [Cucumis sativus] >KGN62736.1 hypothetical protein C...	[more]
XP_008444893.1	7.7e-89	91.35	PREDICTED: protein CutA, chloroplastic [Cucumis melo]	[more]

BLAST of Sed0009042 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93009	6.4e-54	63.24	Protein CutA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CUTA PE=1 SV=1	[more]
Q109R6	2.6e-47	57.63	Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CUTA1 ...	[more]
O60888	1.9e-26	48.65	Protein CutA OS=Homo sapiens OX=9606 GN=CUTA PE=1 SV=2	[more]
Q7SIA8	2.8e-25	50.51	Divalent-cation tolerance protein CutA OS=Thermus thermophilus (strain ATCC 2763...	[more]
P69678	3.6e-25	42.14	Protein CutA OS=Bos taurus OX=9913 GN=CUTA PE=1 SV=1	[more]

BLAST of Sed0009042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K4I7	3.4e-90	92.97	protein CutA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492224 PE=3 SV=...	[more]
A0A0A0LRU0	2.2e-89	91.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370360 PE=3 SV=1	[more]
A0A1S3BBF3	3.7e-89	91.35	protein CutA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488107 PE=3 SV=1	[more]
A0A6J1HF76	1.4e-88	92.43	protein CutA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462991 PE=3 S...	[more]
A0A5A7VD29	1.8e-88	91.35	Protein CutA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004450 P...	[more]

BLAST of Sed0009042 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33740.2	4.5e-55	63.24	Nitrogen regulatory PII-like, alpha/beta	[more]
AT2G33740.1	1.2e-42	61.64	Nitrogen regulatory PII-like, alpha/beta	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004323	Divalent ion tolerance protein, CutA	PFAM	PF03091	CutA1	coord: 84..181 e-value: 3.9E-38 score: 129.3
IPR004323	Divalent ion tolerance protein, CutA	PANTHER	PTHR23419	DIVALENT CATION TOLERANCE CUTA-RELATED	coord: 8..183
IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GENE3D	3.30.70.120		coord: 64..184 e-value: 1.9E-49 score: 168.2
None	No IPR available	PANTHER	PTHR23419:SF8	FI09726P	coord: 8..183
IPR011322	Nitrogen regulatory PII-like, alpha/beta	SUPERFAMILY	54913	GlnB-like	coord: 83..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009042.1	Sed0009042.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010038	response to metal ion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005507	copper ion binding