Sed0008978 (gene) Chayote v1

Overview
NameSed0008978
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG11: 27792712 .. 27798894 (-)
RNA-Seq ExpressionSed0008978
SyntenySed0008978
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGAAGAAGAAAAAAAAAACTTGAATACAGAGCAAATGCCGAAGGATTACGAGACTCGAGAGTGAAGGCTCTTTCGGATGTACAATCCTCGTCCTTCTGTTCATCTCTGTTCTGCTTCTCCATTTCATTGAACTCTGTTGTATTCAATTTCTGTAGGTAAAAATGGGTTGCCCATTTTCAAATCCTTGGAGAAGTTCCATTTGACACTCAACAATGCTTCATTGTGTGTTTGTTAGTTCTGGATTTTGAATTGAAGGGCTCGAATGCTGTGGCGCCACCTTGAAGTGGATTTTGGCTGTTCATACAATCTTGAAAGCTTCAAAGGAATTGAGCCTTTCTGAATCTAGGTTAAGTGTCACTCATCCTTCCTTTTTTATGTTTTTGCCAATGCCTTTTCTATATGTAAAATTTCCAAGGTATAATGGGATTGAGATTGGGATATTTGGAGATATCCTCCATACACCCAATAACTTAATAGCTTTGTTGTCCCATAAACTTTGGCCTTTTAGTGGATAAAGAGGCTAGTGGGGTGGAGCATGAGCAACTTTGTTTGTGGAGGTGAATTTGAAGTTTCCCTTTCTAGATATGGGTAGAGTCATGTTATGAAAGCTTCGTAAAGAATTAAAGATCGTGAGACATAAAACACACATATTTATGTGGTTTACTAACGTTGTGTTGGCTACATCCTTGGTTAGTGGAGAGAAACCGTTCTATTTTGGAGATTGTGAAGAATACAAGATGCTAGGTAAAGGGGGTAAGAGTTTAAATAGTGCACCTCTCATAAAATTCCAATACATTATTTGACTCAGCGAGATCTCGTACCGAGTACTCGTAGCGCAACATAGTTAGTTTGAGGTATTTCAATAAGTCCTTTGGCCTTTGTCATGTTGTTGGATATTTGACTTGAGAGAAATAGTAAATTTTTTGGAGGAGTCGAGAGATGTGGGAAGAGGTTTAATGTATCTTTATGAGTGCTCATACTTGGGCTTTTTTATAACTATAAGCCTGGTCGTGTTCTCTCGTTTTGGAGTCCATTTATGTAACTAGGGTTTGGATTGTTTTTGTGGGCCAGCTATGTTTTGTGCTCTTGTTTTTGTGGGCTAGTTATGTTTTGTGCTCTTGTATAGTCTTTAATTCTAAGGTTGCTATTTAGCATTTTCATCGATTTTAGTTGCATTAAATCAGTCTGACTTAAAAAAAAAAATCAGCAATATGCAAGTTTGGAAGGAGCTATGATAAGAATAGTATTGAATTTTGGAACAGTTATGAACTTGTGAGTTCAGATTATGGTGGTCACTTACCTACAAATTAATCTCCTATGAGTTTACCTTGACAACCCAATGTAATAAGGTCAACCATTGTGTCATGAGAATGATCAAGGACACTCACAGATATAAAAAAAAATATTGGAGTTTATCGACATGTTTGACTTTGGAGTTGTCCAATTCTAGTATTGATAGTGTTTATCCACATCACCACATTGATGTTTGTGATTTATTGTAATGACTGGAAAATCAGAATCTCCCACTTTACCATTTGGTATTATATTTAGCTCTACTCTACTACAATATACGAGGGGACGTGCCCCTCCCAAGACTAGGATCCTGGAGACAACAAGAGATTTTATAATTGAGTAGTTCACTTGAAGGCTCAAAACTTAAGACCTATAAGCAGGTATGAAAAAGATACCCTAAGCCTCTAGGCCCTCTACCAACAAGGCTAAACCTTGGGAATTCAAGAATTTTGAGTTTTAATAGACTTTGAGGATACATTTATATATATGATAAGTGACTTTGTGTGTTCAGGTATTTTTCTTGTTGGATCAGATGAGACTTGTTATATGTTGTGAAGGTGACCCGATGTATTAGCGACACAATTTTGTATTTTTTAAAATGAAACGGAAAAATTTCATTGATATGATGAAAAGTTACAAAAGATCAATAATTACAAAAAAACCTTTCCAATGAAAAATAAGAGTGTCACAATTTTGTTTTAACTTTTGTAGGTTTGTCTGAGGAATATCAATATCAGAAACAGATGGCGTTTTGCACAAAAGTTGCATTGCACTCATGTCTCTCCAAAACAAGGTCTAACTCTCTCATTGCCTTCTCCCTATGACCATCATAGAGTATGGTTGCTAGACTTGTTTTTCTTTACACTTTTGAGAAATATATTGCATGCTATTCAACTGTTGCGTAGCTAAGATAGCTATTTCAAACCACACTTTCATTTTGTTGGCCTTTTATAATTTTTAAAAAAATGCAGGTATTGTTGAAAGAAATTATTCATATGGTTGATGGAAATCTATGATTTTGGAGCTATTATTTTGTTCAAACATTGCGGGGATGCATGGAGGAAAAAGCCTAGAAACCTAACACAGTTAATTAAGTAATTCTTAACTTTACACAATATTTTAGAACTCGTCATGTTAAAAACATCACTAGTATTAAACTTAACATAGAAAACACAGCAAAGTAGTAGTTAATATTTGACGGCTATGCGTGGTTACCTTGTTTCAAAAAAAAAAAATTTGACGGCAATGATTTGTTATAATTTATTGAAATGTTAAGAAAAATTTGGTGTTTGCTAAATATCAAGTTAGTTTAGCATGACCTACCAACCTCGTACTAAGTGTGCTCATCGTTCGTAATTTCCAGAGAAGGAGAAGTTTTTGTGGCAGATTGGGATTTGTGTTATTTTACGGGATTTGTGGAGTGAGGGCAAGAATAGGATCTTTAGAGGCAGTGTTTTTAACACTTCAATACCTCATGGCACAAAAAAGAAGTGCAAGCTTTTTTTTTATATATAAAAATATTCATAAAGAAGAAATAGTAAATTTTATTTTTTATTTAATATTTTTTTTAAAACCTCTAAAAGCAAGATTTTTGTATTTATTAGTAATTTTTTTTAACAATATAACACCCAACTTTTTATCTGAGGCCCTCAAGGTGCAAGTCAAGGCGCTAGATATGCGCCTTGAGCCTGCGTGAGTCTGAGCGATCATTTTAAAACACTTTTAGAGGATTGAGAGGGATTGGACTTGGGTATGGTCCCTCGTTAGGTTCCATGCTTTGCTTTGAGTGTCAGTGAAGCTCTTGTTTTATAATTATTTCTTAGGTCTTATTTTACTTGATTGGATCCCCTTACTTTAGCGAGGTTTCCTTTTGTGGGCTTGTATACCCTTGTATTCTTTTATTTATTTATTGTTTATTCAGGAAAGTTCCTAAAAAACCTAGTACTAAGTGTGTTCATACATAACAATGTATCAATGTCAGGCAAGACCTTTTGTTCTACCAGTGGGGCTTACTCAACCCCAAATGATTTGCAGGTTCTTCCTTTCGCTCTCCCATGGCCTCCTTCAGGCTCGGAAAATTTCAACTCAGGAACAATTCGTTTATGGAAAGTTCAATCTCAGTCTCGATCCCTCTACTCAGCATTCTTACATGGAGCTCTCCCAGAAATTCTATGAGGCGATGAAAGCATGTGCATTGATCGGATCAGCATCCATAGCATCAAAGCTTCATGGCCAACTGATCTCGACTGGTTTGTGCTCTTCCATTTTCCTCCAAAACCATCTCTTACACACGTACTCAAAATGTGGGTTAATAAATGAGGTTCTACAGATTTTCTTTAACATTAAGCGTCCTAATGTCATTACTTGGAATACAATTCTTAGTGCGTTATTGGATTCGGGTCAAGTAAGGGAAGCAGAGAAGATGTTTGATGAAATGCCCGTTAGAGATCCTGTTTCTTGGACTGCAATGATGTCGGGATACTTCCGTAATGGTCAGGCAATGGATACTATCAAGCTTTTTGTTTCGATGTTTCGAGATTCAAATTGTGTTCCTGACTTGTTTTGTTTCTCCTGTGCTATGAAGGCTTGCAGTAATCTTGGTTATGCAAGGATAGCTCTTCAGTTGCATGGTCTCATAGAGAAATATGGTATTGGAAACAACGAAGCCGTCCAAAATTCTGTCATTGATATGTATGTTAAATGTGGTTCTGTTTATGCTGCCGAGGAAGTCTTTCTGAGGATTGAAAAGCCAAGCTTATTTAGCTGGAACAGTATGATCTATGGTTACTCTAAATTACAAAAGGTGGGAAAGGCACTTGACACTTTCATACAAATGCCTGAACGCGATTCTGTATCGTGGAATACAATCATTTCAGCATTTTCTCAACATGGTCTGCACACACAGAGCCTCAGTATGTTTGTTGAAATGTGGATTCAGGACTGTCAGCCAAATCCAATGACATATGCAAGTGTTCTTAGTGCATGTGCTAACATCTATGATCTTCAATGGGGAAAACATCTGCATGCCCGAATTGTCCGCTTTGAACCCTTTTTGGATGTTTTAGTGGGCAATGGGCTGGTCGATATGTATGCAAAATGTGGACTCATTGAGGCTTCGAAAAAGGTATTTAACTTACTAACAAAACGAAACGTAGTGACTTGGACTTCATTAATAAGTGGAATTGTGCAATTTGGTAGTCGAGAAGAAGTTTATGATATTTTTTACCGAATGAGAGAAGATTGTGTTGCTATGGATGACTTTATTCTTGCAACCATTCTTGGTGTTTGTGAAGGAGAAGAAAATATTTCAATTGGAGAGCAATTACATGCGTTTACAGTGAAGGCTGGGATGAATTCTTCTGTGCCTGTGGGCAATGCTACTGTGTCGATGTATGCAAAATGTGGAGAAATTGGAAAAGCAAGTCTTGCTTTTGAATCGATGGCTGCTCGAGATGTTATTTCATGGACTACAATGATCACTGCATTCACTCACAATGGTGATGTACAAAAAGCACAGGACTATTTTGATCGAATGCCAGCTCGTAATGTCATAAGTTGGAATTCAATGTTGGGTGCATATTTCCAAAACGGTTTTTGGGAAGAAGGTTTAAAACTGTACATTCTTATGTTAAGACAGGAAGTCAGGCCTGATTGGATCACCTTTGTTACCACGATCCGTGCTTGTTCCGAGTTAGCAATTGCAAAACTTGGAACACAGATAGTATCCCAAGTAGTAAAAGCAGGGCTTGGTTCTGATGTTTCGGTTGCTAACAGCGCAATTACCTTGTATTCTAGATGTGGTAACATTGAAGAAGCACAGACCATTTTTGACTCGATACAGGAGAAAAACCTGATTTCTTGGAACTCAATAATGGGAGGATATGCTCAAAATGGTCTAGGCAGGGAGGTGATTGAAGTTTTTCAGAACATGTTGATGGTTGGTTGTAAACCTGATCATATTACCTTTGTAGCAGTTTTATCAGGTTGCAGCCATTCAGGCCTTGTAGAAGAAGCAAAACATTACTTCAACTCCATGACTAGAGATTTTAGCATCTCTGCAACTCCCGAGCACTTTGCGTGTATGGTAGATTTGTTCGGTCGAGCTGGGTTACTGAAGCAGGCCATGGATGTGATTGATCAAATGCCATTTACGCCAAATGTCGCCATATGGGGCGCTCTACTCAGCGCTTCTAGGATCCACCACGACACTGAAATGGCAGAGCTGGCCGTGAAGAACTTGCTAGCATTGAACACCGAAAACTCCGAAAGTTACATTCTGCTTGCAAATGTCTACTCCAGTACTGGGAGATTGGAGTGTGTTTCTGATGTGAGACAAGTGATGAGAGAGAAAGGAGTTCAGAAAGATCCTGGTTGCAGCTGGATAGAGGTGTGCAACAGGGTCCATGTCTTTACTGTCAATGACACAGATCATCCACTAATTAAGGACATTTACAAGGCACTGGAAGACATTGTGAAGAAGATCAAAGACGATCATGGTTACGTCGACGCGTCAAGCTCTATTGGGTATCATAGCGAGAAGCTTGCCATTGCTTTTGGTTTGATTAGCTTGCCTGATTGGATGCCAATCCATGTGATGAAAAACCTTAGAGTTTGCAACGATTGTCACCAGGTGATGAAACTGATTTCTCTTGTTTCCATGAGGAAACTTGTTGTGCGGGATGGGCACCGATTTCATCACTTGAAGGATGGGATTTGCTCTTGTGGAGATTATTGGTAATTATAAGCCTGAATTCTGAGAGGAAAAGGAAGAAAGCTAACACATTGTTGAACTTGTTTCCACCAGAGATTATGCAAGGGAAGTGTATGGGTTATTTGTTTTCTATTTTATAGTGTTTATGTTAGGATAAATGATGAAGTGAAAGGCC

mRNA sequence

AAGAAGAAGAAGAAAAAAAAAACTTGAATACAGAGCAAATGCCGAAGGATTACGAGACTCGAGAGTGAAGGCTCTTTCGGATGTACAATCCTCGTCCTTCTGTTCATCTCTGTTCTGCTTCTCCATTTCATTGAACTCTGTTGTATTCAATTTCTGTAGGTAAAAATGGGTTGCCCATTTTCAAATCCTTGGAGAAGTTCCATTTGACACTCAACAATGCTTCATTGTGTGTTTGTTAGTTCTGGATTTTGAATTGAAGGGCTCGAATGCTGTGGCGCCACCTTGAAGTGGATTTTGGCTGTTCATACAATCTTGAAAGCTTCAAAGGAATTGAGCCTTTCTGAATCTAGGTTTGTCTGAGGAATATCAATATCAGAAACAGATGGCGTTTTGCACAAAAGTTGCATTGCACTCATGTCTCTCCAAAACAAGGTTCTTCCTTTCGCTCTCCCATGGCCTCCTTCAGGCTCGGAAAATTTCAACTCAGGAACAATTCGTTTATGGAAAGTTCAATCTCAGTCTCGATCCCTCTACTCAGCATTCTTACATGGAGCTCTCCCAGAAATTCTATGAGGCGATGAAAGCATGTGCATTGATCGGATCAGCATCCATAGCATCAAAGCTTCATGGCCAACTGATCTCGACTGGTTTGTGCTCTTCCATTTTCCTCCAAAACCATCTCTTACACACGTACTCAAAATGTGGGTTAATAAATGAGGTTCTACAGATTTTCTTTAACATTAAGCGTCCTAATGTCATTACTTGGAATACAATTCTTAGTGCGTTATTGGATTCGGGTCAAGTAAGGGAAGCAGAGAAGATGTTTGATGAAATGCCCGTTAGAGATCCTGTTTCTTGGACTGCAATGATGTCGGGATACTTCCGTAATGGCTTGCAGTAATCTTGGTTATGCAAGGATAGCTCTTCAGTTGCATGGTCTCATAGAGAAATATGGTATTGGAAACAACGAAGCCGTCCAAAATTCTGTCATTGATATGTATGTTAAATGTGGTTCTGTTTATGCTGCCGAGGAAGTCTTTCTGAGGATTGAAAAGCCAAGCTTATTTAGCTGGAACAGTATGATCTATGGTTACTCTAAATTACAAAAGGTGGGAAAGGCACTTGACACTTTCATACAAATGCCTGAACGCGATTCTGTATCGTGGAATACAATCATTTCAGCATTTTCTCAACATGGTCTGCACACACAGAGCCTCAGTATGTTTGTTGAAATGTGGATTCAGGACTGTCAGCCAAATCCAATGACATATGCAAGTGTTCTTAGTGCATGTGCTAACATCTATGATCTTCAATGGGGAAAACATCTGCATGCCCGAATTGTCCGCTTTGAACCCTTTTTGGATGTTTTAGTGGGCAATGGGCTGGTCGATATGTATGCAAAATGTGGACTCATTGAGGCTTCGAAAAAGGTATTTAACTTACTAACAAAACGAAACGTAGTGACTTGGACTTCATTAATAAGTGGAATTGTGCAATTTGGTAGTCGAGAAGAAGTTTATGATATTTTTTACCGAATGAGAGAAGATTGTGTTGCTATGGATGACTTTATTCTTGCAACCATTCTTGGTGTTTGTGAAGGAGAAGAAAATATTTCAATTGGAGAGCAATTACATGCGTTTACAGTGAAGGCTGGGATGAATTCTTCTGTGCCTGTGGGCAATGCTACTGTGTCGATGTATGCAAAATGTGGAGAAATTGGAAAAGCAAGTCTTGCTTTTGAATCGATGGCTGCTCGAGATGTTATTTCATGGACTACAATGATCACTGCATTCACTCACAATGGTGATGTACAAAAAGCACAGGACTATTTTGATCGAATGCCAGCTCGTAATGTCATAAGTTGGAATTCAATGTTGGGTGCATATTTCCAAAACGGTTTTTGGGAAGAAGGTTTAAAACTGTACATTCTTATGTTAAGACAGGAAGTCAGGCCTGATTGGATCACCTTTGTTACCACGATCCGTGCTTGTTCCGAGTTAGCAATTGCAAAACTTGGAACACAGATAGTATCCCAAGTAGTAAAAGCAGGGCTTGGTTCTGATGTTTCGGTTGCTAACAGCGCAATTACCTTGTATTCTAGATGTGGTAACATTGAAGAAGCACAGACCATTTTTGACTCGATACAGGAGAAAAACCTGATTTCTTGGAACTCAATAATGGGAGGATATGCTCAAAATGGTCTAGGCAGGGAGGTGATTGAAGTTTTTCAGAACATGTTGATGGTTGGTTGTAAACCTGATCATATTACCTTTGTAGCAGTTTTATCAGGTTGCAGCCATTCAGGCCTTGTAGAAGAAGCAAAACATTACTTCAACTCCATGACTAGAGATTTTAGCATCTCTGCAACTCCCGAGCACTTTGCGTGTATGGTAGATTTGTTCGGTCGAGCTGGGTTACTGAAGCAGGCCATGGATGTGATTGATCAAATGCCATTTACGCCAAATGTCGCCATATGGGGCGCTCTACTCAGCGCTTCTAGGATCCACCACGACACTGAAATGGCAGAGCTGGCCGTGAAGAACTTGCTAGCATTGAACACCGAAAACTCCGAAAGTTACATTCTGCTTGCAAATGTCTACTCCAGTACTGGGAGATTGGAGTGTGTTTCTGATGTGAGACAAGTGATGAGAGAGAAAGGAGTTCAGAAAGATCCTGGTTGCAGCTGGATAGAGGTGTGCAACAGGGTCCATGTCTTTACTGTCAATGACACAGATCATCCACTAATTAAGGACATTTACAAGGCACTGGAAGACATTGTGAAGAAGATCAAAGACGATCATGGTTACGTCGACGCGTCAAGCTCTATTGGGTATCATAGCGAGAAGCTTGCCATTGCTTTTGGTTTGATTAGCTTGCCTGATTGGATGCCAATCCATGTGATGAAAAACCTTAGAGTTTGCAACGATTGTCACCAGGTGATGAAACTGATTTCTCTTGTTTCCATGAGGAAACTTGTTGTGCGGGATGGGCACCGATTTCATCACTTGAAGGATGGGATTTGCTCTTGTGGAGATTATTGGTAATTATAAGCCTGAATTCTGAGAGGAAAAGGAAGAAAGCTAACACATTGTTGAACTTGTTTCCACCAGAGATTATGCAAGGGAAGTGTATGGGTTATTTGTTTTCTATTTTATAGTGTTTATGTTAGGATAAATGATGAAGTGAAAGGCC

Coding sequence (CDS)

ATGGCTTGCAGTAATCTTGGTTATGCAAGGATAGCTCTTCAGTTGCATGGTCTCATAGAGAAATATGGTATTGGAAACAACGAAGCCGTCCAAAATTCTGTCATTGATATGTATGTTAAATGTGGTTCTGTTTATGCTGCCGAGGAAGTCTTTCTGAGGATTGAAAAGCCAAGCTTATTTAGCTGGAACAGTATGATCTATGGTTACTCTAAATTACAAAAGGTGGGAAAGGCACTTGACACTTTCATACAAATGCCTGAACGCGATTCTGTATCGTGGAATACAATCATTTCAGCATTTTCTCAACATGGTCTGCACACACAGAGCCTCAGTATGTTTGTTGAAATGTGGATTCAGGACTGTCAGCCAAATCCAATGACATATGCAAGTGTTCTTAGTGCATGTGCTAACATCTATGATCTTCAATGGGGAAAACATCTGCATGCCCGAATTGTCCGCTTTGAACCCTTTTTGGATGTTTTAGTGGGCAATGGGCTGGTCGATATGTATGCAAAATGTGGACTCATTGAGGCTTCGAAAAAGGTATTTAACTTACTAACAAAACGAAACGTAGTGACTTGGACTTCATTAATAAGTGGAATTGTGCAATTTGGTAGTCGAGAAGAAGTTTATGATATTTTTTACCGAATGAGAGAAGATTGTGTTGCTATGGATGACTTTATTCTTGCAACCATTCTTGGTGTTTGTGAAGGAGAAGAAAATATTTCAATTGGAGAGCAATTACATGCGTTTACAGTGAAGGCTGGGATGAATTCTTCTGTGCCTGTGGGCAATGCTACTGTGTCGATGTATGCAAAATGTGGAGAAATTGGAAAAGCAAGTCTTGCTTTTGAATCGATGGCTGCTCGAGATGTTATTTCATGGACTACAATGATCACTGCATTCACTCACAATGGTGATGTACAAAAAGCACAGGACTATTTTGATCGAATGCCAGCTCGTAATGTCATAAGTTGGAATTCAATGTTGGGTGCATATTTCCAAAACGGTTTTTGGGAAGAAGGTTTAAAACTGTACATTCTTATGTTAAGACAGGAAGTCAGGCCTGATTGGATCACCTTTGTTACCACGATCCGTGCTTGTTCCGAGTTAGCAATTGCAAAACTTGGAACACAGATAGTATCCCAAGTAGTAAAAGCAGGGCTTGGTTCTGATGTTTCGGTTGCTAACAGCGCAATTACCTTGTATTCTAGATGTGGTAACATTGAAGAAGCACAGACCATTTTTGACTCGATACAGGAGAAAAACCTGATTTCTTGGAACTCAATAATGGGAGGATATGCTCAAAATGGTCTAGGCAGGGAGGTGATTGAAGTTTTTCAGAACATGTTGATGGTTGGTTGTAAACCTGATCATATTACCTTTGTAGCAGTTTTATCAGGTTGCAGCCATTCAGGCCTTGTAGAAGAAGCAAAACATTACTTCAACTCCATGACTAGAGATTTTAGCATCTCTGCAACTCCCGAGCACTTTGCGTGTATGGTAGATTTGTTCGGTCGAGCTGGGTTACTGAAGCAGGCCATGGATGTGATTGATCAAATGCCATTTACGCCAAATGTCGCCATATGGGGCGCTCTACTCAGCGCTTCTAGGATCCACCACGACACTGAAATGGCAGAGCTGGCCGTGAAGAACTTGCTAGCATTGAACACCGAAAACTCCGAAAGTTACATTCTGCTTGCAAATGTCTACTCCAGTACTGGGAGATTGGAGTGTGTTTCTGATGTGAGACAAGTGATGAGAGAGAAAGGAGTTCAGAAAGATCCTGGTTGCAGCTGGATAGAGGTGTGCAACAGGGTCCATGTCTTTACTGTCAATGACACAGATCATCCACTAATTAAGGACATTTACAAGGCACTGGAAGACATTGTGAAGAAGATCAAAGACGATCATGGTTACGTCGACGCGTCAAGCTCTATTGGGTATCATAGCGAGAAGCTTGCCATTGCTTTTGGTTTGATTAGCTTGCCTGATTGGATGCCAATCCATGTGATGAAAAACCTTAGAGTTTGCAACGATTGTCACCAGGTGATGAAACTGATTTCTCTTGTTTCCATGAGGAAACTTGTTGTGCGGGATGGGCACCGATTTCATCACTTGAAGGATGGGATTTGCTCTTGTGGAGATTATTGGTAA

Protein sequence

MACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDCQPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLISLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW
Homology
[Close]
BLAST of Sed0008978 vs. NCBI nr
Match: XP_038894464.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Benincasa hispida])

HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 627/717 (87.45%), Postives = 677/717 (94.42%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS++GY RIALQLHGL EKYG GNN+A+QNS+IDMY+KCG++YAAE+VFLRIEKPSLFS
Sbjct: 55  ACSSVGYVRIALQLHGLSEKYGFGNNKAIQNSIIDMYIKCGAIYAAEQVFLRIEKPSLFS 114

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSKL ++G+A DTFIQMPERDSVSWNTIIS+FSQHGLHTQSL  FVEMWIQDC
Sbjct: 115 WNSMIYGYSKLHEMGRAFDTFIQMPERDSVSWNTIISSFSQHGLHTQSLGTFVEMWIQDC 174

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPNPMTYASVLSACANI D QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 175 QPNPMTYASVLSACANICDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 234

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFY+MREDCV MDDFILATILGVCEGE+N
Sbjct: 235 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYQMREDCVTMDDFILATILGVCEGEKN 294

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH FTVK GMNSSVPVGNAT++MYAKCG++ KASLAFE+MAA+DVISWTTMIT+
Sbjct: 295 ISIGEQLHGFTVKTGMNSSVPVGNATLTMYAKCGDVEKASLAFETMAAQDVISWTTMITS 354

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FTH+G+V++A+DYFDRMP RNVISWN+MLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF
Sbjct: 355 FTHSGNVERARDYFDRMPERNVISWNAMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 414

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
           VTTI ACSELAI+KLGTQIVSQ VK GLGSDVSVANS ITLYSRCG IEEAQ IFDSIQE
Sbjct: 415 VTTISACSELAISKLGTQIVSQAVKVGLGSDVSVANSVITLYSRCGRIEEAQKIFDSIQE 474

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIEVFQNMLMVGC+PDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 475 KNLISWNSIMGGYAQNGEGRKVIEVFQNMLMVGCRPDHITYVAILSGCSHSGLVKEAKHY 534

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSMT+DF ISAT EHF CMVDLFGRAGLLK A+D+IDQMPF PN  IWGALLSA RIH 
Sbjct: 535 FNSMTKDFGISATLEHFVCMVDLFGRAGLLKPALDLIDQMPFKPNATIWGALLSACRIHR 594

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAELA+KNLL LNTEN ESYILLANVYSS+GRLECVSDVRQVMREKGVQKDPGCSWI
Sbjct: 595 DTEMAELAMKNLLELNTENFESYILLANVYSSSGRLECVSDVRQVMREKGVQKDPGCSWI 654

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT HP IKDIYKALEDI+KKIKDD+GYVD SSS+GYHSEKLAIAFGLI
Sbjct: 655 EVSNRVHVFTVNDTSHPQIKDIYKALEDIIKKIKDDYGYVDGSSSVGYHSEKLAIAFGLI 714

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLPDWMPI+VMKNLRVCNDCHQVMKLISLV+MRKLV+RDGHRFHHL++G CSCGDYW
Sbjct: 715 SLPDWMPIYVMKNLRVCNDCHQVMKLISLVAMRKLVMRDGHRFHHLQNGSCSCGDYW 771

[Close]
BLAST of Sed0008978 vs. NCBI nr
Match: XP_038894463.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 627/717 (87.45%), Postives = 677/717 (94.42%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS++GY RIALQLHGL EKYG GNN+A+QNS+IDMY+KCG++YAAE+VFLRIEKPSLFS
Sbjct: 202 ACSSVGYVRIALQLHGLSEKYGFGNNKAIQNSIIDMYIKCGAIYAAEQVFLRIEKPSLFS 261

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSKL ++G+A DTFIQMPERDSVSWNTIIS+FSQHGLHTQSL  FVEMWIQDC
Sbjct: 262 WNSMIYGYSKLHEMGRAFDTFIQMPERDSVSWNTIISSFSQHGLHTQSLGTFVEMWIQDC 321

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPNPMTYASVLSACANI D QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 322 QPNPMTYASVLSACANICDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 381

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFY+MREDCV MDDFILATILGVCEGE+N
Sbjct: 382 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYQMREDCVTMDDFILATILGVCEGEKN 441

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH FTVK GMNSSVPVGNAT++MYAKCG++ KASLAFE+MAA+DVISWTTMIT+
Sbjct: 442 ISIGEQLHGFTVKTGMNSSVPVGNATLTMYAKCGDVEKASLAFETMAAQDVISWTTMITS 501

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FTH+G+V++A+DYFDRMP RNVISWN+MLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF
Sbjct: 502 FTHSGNVERARDYFDRMPERNVISWNAMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 561

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
           VTTI ACSELAI+KLGTQIVSQ VK GLGSDVSVANS ITLYSRCG IEEAQ IFDSIQE
Sbjct: 562 VTTISACSELAISKLGTQIVSQAVKVGLGSDVSVANSVITLYSRCGRIEEAQKIFDSIQE 621

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIEVFQNMLMVGC+PDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 622 KNLISWNSIMGGYAQNGEGRKVIEVFQNMLMVGCRPDHITYVAILSGCSHSGLVKEAKHY 681

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSMT+DF ISAT EHF CMVDLFGRAGLLK A+D+IDQMPF PN  IWGALLSA RIH 
Sbjct: 682 FNSMTKDFGISATLEHFVCMVDLFGRAGLLKPALDLIDQMPFKPNATIWGALLSACRIHR 741

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAELA+KNLL LNTEN ESYILLANVYSS+GRLECVSDVRQVMREKGVQKDPGCSWI
Sbjct: 742 DTEMAELAMKNLLELNTENFESYILLANVYSSSGRLECVSDVRQVMREKGVQKDPGCSWI 801

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT HP IKDIYKALEDI+KKIKDD+GYVD SSS+GYHSEKLAIAFGLI
Sbjct: 802 EVSNRVHVFTVNDTSHPQIKDIYKALEDIIKKIKDDYGYVDGSSSVGYHSEKLAIAFGLI 861

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLPDWMPI+VMKNLRVCNDCHQVMKLISLV+MRKLV+RDGHRFHHL++G CSCGDYW
Sbjct: 862 SLPDWMPIYVMKNLRVCNDCHQVMKLISLVAMRKLVMRDGHRFHHLQNGSCSCGDYW 918

[Close]
BLAST of Sed0008978 vs. NCBI nr
Match: XP_023520697.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520698.1 pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520699.1 pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520700.1 pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520701.1 pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1315.4 bits (3403), Expect = 0.0e+00
Identity = 626/717 (87.31%), Postives = 677/717 (94.42%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS++GY RIALQLHGL  KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 202 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 261

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 262 WNSMIYGYSKLHEMGRALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 321

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPN MTYASVLSACANIYD QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 322 QPNSMTYASVLSACANIYDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 381

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 382 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 441

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KASLAFE+MAARDVISWTTMIT+
Sbjct: 442 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKASLAFETMAARDVISWTTMITS 501

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FT NG+V++AQDYFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 502 FTRNGNVERAQDYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 561

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
           VTTI +CSELAI+KLGTQI+SQ V+ GLGSDVSVANSAITLYSRCG IE+A  +FDSI+E
Sbjct: 562 VTTISSCSELAISKLGTQIISQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIRE 621

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHITFVA+LSGCSHSGLV+EAKHY
Sbjct: 622 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITFVAILSGCSHSGLVKEAKHY 681

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSMT+DF ISATPEHFACMVDLFGRAGLLK AMD+IDQMPF PNV IWG LLSA RIHH
Sbjct: 682 FNSMTKDFGISATPEHFACMVDLFGRAGLLKSAMDLIDQMPFKPNVTIWGTLLSACRIHH 741

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MREKGVQKDPGCSWI
Sbjct: 742 DTEMAEVAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMREKGVQKDPGCSWI 801

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT+HP IKDIYKALEDIVKKIKDD+GYVDAS SIGYHSEKLAIAFGLI
Sbjct: 802 EVSNRVHVFTVNDTNHPQIKDIYKALEDIVKKIKDDYGYVDASGSIGYHSEKLAIAFGLI 861

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 862 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 918

[Close]
BLAST of Sed0008978 vs. NCBI nr
Match: XP_023520702.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1315.4 bits (3403), Expect = 0.0e+00
Identity = 626/717 (87.31%), Postives = 677/717 (94.42%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS++GY RIALQLHGL  KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 174 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 233

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 234 WNSMIYGYSKLHEMGRALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 293

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPN MTYASVLSACANIYD QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 294 QPNSMTYASVLSACANIYDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 353

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 354 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 413

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KASLAFE+MAARDVISWTTMIT+
Sbjct: 414 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKASLAFETMAARDVISWTTMITS 473

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FT NG+V++AQDYFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 474 FTRNGNVERAQDYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 533

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
           VTTI +CSELAI+KLGTQI+SQ V+ GLGSDVSVANSAITLYSRCG IE+A  +FDSI+E
Sbjct: 534 VTTISSCSELAISKLGTQIISQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIRE 593

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHITFVA+LSGCSHSGLV+EAKHY
Sbjct: 594 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITFVAILSGCSHSGLVKEAKHY 653

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSMT+DF ISATPEHFACMVDLFGRAGLLK AMD+IDQMPF PNV IWG LLSA RIHH
Sbjct: 654 FNSMTKDFGISATPEHFACMVDLFGRAGLLKSAMDLIDQMPFKPNVTIWGTLLSACRIHH 713

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MREKGVQKDPGCSWI
Sbjct: 714 DTEMAEVAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMREKGVQKDPGCSWI 773

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT+HP IKDIYKALEDIVKKIKDD+GYVDAS SIGYHSEKLAIAFGLI
Sbjct: 774 EVSNRVHVFTVNDTNHPQIKDIYKALEDIVKKIKDDYGYVDASGSIGYHSEKLAIAFGLI 833

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 834 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 890

[Close]
BLAST of Sed0008978 vs. NCBI nr
Match: XP_023520703.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1315.4 bits (3403), Expect = 0.0e+00
Identity = 626/717 (87.31%), Postives = 677/717 (94.42%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS++GY RIALQLHGL  KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 55  ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 114

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 115 WNSMIYGYSKLHEMGRALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 174

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPN MTYASVLSACANIYD QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 175 QPNSMTYASVLSACANIYDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 234

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 235 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 294

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KASLAFE+MAARDVISWTTMIT+
Sbjct: 295 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKASLAFETMAARDVISWTTMITS 354

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FT NG+V++AQDYFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 355 FTRNGNVERAQDYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 414

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
           VTTI +CSELAI+KLGTQI+SQ V+ GLGSDVSVANSAITLYSRCG IE+A  +FDSI+E
Sbjct: 415 VTTISSCSELAISKLGTQIISQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIRE 474

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHITFVA+LSGCSHSGLV+EAKHY
Sbjct: 475 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITFVAILSGCSHSGLVKEAKHY 534

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSMT+DF ISATPEHFACMVDLFGRAGLLK AMD+IDQMPF PNV IWG LLSA RIHH
Sbjct: 535 FNSMTKDFGISATPEHFACMVDLFGRAGLLKSAMDLIDQMPFKPNVTIWGTLLSACRIHH 594

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MREKGVQKDPGCSWI
Sbjct: 595 DTEMAEVAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMREKGVQKDPGCSWI 654

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT+HP IKDIYKALEDIVKKIKDD+GYVDAS SIGYHSEKLAIAFGLI
Sbjct: 655 EVSNRVHVFTVNDTNHPQIKDIYKALEDIVKKIKDDYGYVDASGSIGYHSEKLAIAFGLI 714

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 715 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 771

[Close]
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 4.7e-145
Identity = 285/763 (37.35%), Postives = 437/763 (57.27%), Query Frame = 0 

Query: 5   NLGYARIALQL-HGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWN 64
           N    R   QL H  + K G+  +  + N+++++Y K G    A ++F  +   + FSWN
Sbjct: 25  NKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWN 84

Query: 65  SMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDCQP 124
           +++  YSK   +    + F Q+P+RDSVSW T+I  +   G + +++ +  +M  +  +P
Sbjct: 85  TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144

Query: 125 NPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKKVF 184
              T  +VL++ A    ++ GK +H+ IV+     +V V N L++MYAKCG    +K VF
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204

Query: 185 N-------------------------------LLTKRNVVTWTSLISGIVQFGSREEVYD 244
           +                                + +R++VTW S+ISG  Q G      D
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264

Query: 245 IFYRM-REDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAGMNSSVPVGNATVSMY 304
           IF +M R+  ++ D F LA++L  C   E + IG+Q+H+  V  G + S  V NA +SMY
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324

Query: 305 AKCGEIGKASLAFESMAARD--VISWTTMITAFTHNGDVQKAQDYFDRMPARNVISWNSM 364
           ++CG +  A    E    +D  +  +T ++  +   GD+ +A++ F  +  R+V++W +M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384

Query: 365 LGAYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELAIAKLGTQIVSQVVKAGL 424
           +  Y Q+G + E + L+  M+    RP+  T    +   S LA    G QI    VK+G 
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444

Query: 425 GSDVSVANSAITLYSRCGNIEEAQTIFDSIQ-EKNLISWNSIMGGYAQNGLGREVIEVFQ 484
              VSV+N+ IT+Y++ GNI  A   FD I+ E++ +SW S++   AQ+G   E +E+F+
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504

Query: 485 NMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATPEHFACMVDLFGRA 544
            MLM G +PDHIT+V V S C+H+GLV + + YF+ M     I  T  H+ACMVDLFGRA
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564

Query: 545 GLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLALNTENSESYILLA 604
           GLL++A + I++MP  P+V  WG+LLSA R+H + ++ ++A + LL L  ENS +Y  LA
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALA 624

Query: 605 NVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDTDHPLIKDIYKALE 664
           N+YS+ G+ E  + +R+ M++  V+K+ G SWIEV ++VHVF V D  HP   +IY  ++
Sbjct: 625 NLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMK 684

Query: 665 DIVKKIKDDHGYVDASSSI-------------GYHSEKLAIAFGLISLPDWMPIHVMKNL 719
            I  +IK   GYV  ++S+              +HSEKLAIAFGLIS PD   + +MKNL
Sbjct: 685 KIWDEIK-KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNL 744

[Close]
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.0e-143
Identity = 251/639 (39.28%), Postives = 393/639 (61.50%), Query Frame = 0 

Query: 15  LHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWNSMIYGYSKLQK 74
           +H  + K G  N   +QN +ID Y KCGS+    +VF ++ + ++++WNS++ G +KL  
Sbjct: 42  VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101

Query: 75  VGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDCQPNPMTYASVLSA 134
           + +A   F  MPERD  +WN+++S F+QH    ++L  F  M  +    N  ++ASVLSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161

Query: 135 CANIYDLQWGKHLHARIVRFEPFL-DVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVT 194
           C+ + D+  G  +H+ I +  PFL DV +G+ LVDMY+KCG +  +++VF+ +  RNVV+
Sbjct: 162 CSGLNDMNKGVQVHSLIAK-SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 221

Query: 195 WTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTV 254
           W SLI+   Q G   E  D+F  M E  V  D+  LA+++  C     I +G+++H   V
Sbjct: 222 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 281

Query: 255 KAG-MNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQ 314
           K   + + + + NA V MYAKC  I +A   F+SM  R+VI+ T+MI+ +      + A+
Sbjct: 282 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 341

Query: 315 DYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELA 374
             F +M  RNV+SWN+++  Y QNG  EE L L+ L+ R+ V P   +F   ++AC++LA
Sbjct: 342 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 401

Query: 375 IAKLGTQIVSQVVK------AGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLIS 434
              LG Q    V+K      +G   D+ V NS I +Y +CG +EE   +F  + E++ +S
Sbjct: 402 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 461

Query: 435 WNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMT 494
           WN+++ G+AQNG G E +E+F+ ML  G KPDHIT + VLS C H+G VEE +HYF+SMT
Sbjct: 462 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 521

Query: 495 RDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMA 554
           RDF ++   +H+ CMVDL GRAG L++A  +I++MP  P+  IWG+LL+A ++H +  + 
Sbjct: 522 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLG 581

Query: 555 ELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNR 614
           +   + LL +   NS  Y+LL+N+Y+  G+ E V +VR+ MR++GV K PGCSWI++   
Sbjct: 582 KYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGH 641

Query: 615 VHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASS 646
            HVF V D  HP  K I+  L+ ++ +++ +  + +  S
Sbjct: 642 DHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGS 679

[Close]
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 491.9 bits (1265), Expect = 1.2e-137
Identity = 253/731 (34.61%), Postives = 405/731 (55.40%), Query Frame = 0 

Query: 1    MACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLF 60
            +ACS  G      QLH    K G  +N  ++ +++++Y KC  +  A + FL  E  ++ 
Sbjct: 397  VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456

Query: 61   SWNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQD 120
             WN M+  Y  L  +                                 S  +F +M I++
Sbjct: 457  LWNVMLVAYGLLDDL-------------------------------RNSFRIFRQMQIEE 516

Query: 121  CQPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASK 180
              PN  TY S+L  C  + DL+ G+ +H++I++    L+  V + L+DMYAK G ++ + 
Sbjct: 517  IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 576

Query: 181  KVFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEE 240
             +      ++VV+WT++I+G  Q+   ++    F +M +  +  D+  L   +  C G +
Sbjct: 577  DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 636

Query: 241  NISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMIT 300
             +  G+Q+HA    +G +S +P  NA V++Y++CG+I ++ LAFE   A D I+W  +++
Sbjct: 637  ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 696

Query: 301  AFTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWIT 360
             F                                Q+G  EE L++++ M R+ +  +  T
Sbjct: 697  GFQ-------------------------------QSGNNEEALRVFVRMNREGIDNNNFT 756

Query: 361  FVTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQ 420
            F + ++A SE A  K G Q+ + + K G  S+  V N+ I++Y++CG+I +A+  F  + 
Sbjct: 757  FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 816

Query: 421  EKNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKH 480
             KN +SWN+I+  Y+++G G E ++ F  M+    +P+H+T V VLS CSH GLV++   
Sbjct: 817  TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIA 876

Query: 481  YFNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIH 540
            YF SM  ++ +S  PEH+ C+VD+  RAGLL +A + I +MP  P+  +W  LLSA  +H
Sbjct: 877  YFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 936

Query: 541  HDTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSW 600
             + E+ E A  +LL L  E+S +Y+LL+N+Y+ + + +     RQ M+EKGV+K+PG SW
Sbjct: 937  KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSW 996

Query: 601  IEVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSS-------------I 660
            IEV N +H F V D +HPL  +I++  +D+ K+   + GYV    S             I
Sbjct: 997  IEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLLNELQHEQKDPII 1056

Query: 661  GYHSEKLAIAFGLISLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL 719
              HSEKLAI+FGL+SLP  +PI+VMKNLRVCNDCH  +K +S VS R+++VRD +RFHH 
Sbjct: 1057 FIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHF 1064

[Close]
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 4.4e-135
Identity = 232/657 (35.31%), Postives = 400/657 (60.88%), Query Frame = 0 

Query: 78  ALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQ-DCQPNPMTYASVLSACA 137
           A   F ++P+ +S +WNT+I A++       S+  F++M  +  C PN  T+  ++ A A
Sbjct: 83  ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142

Query: 138 NIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVTWTS 197
            +  L  G+ LH   V+     DV V N L+  Y  CG ++++ KVF  + +++VV+W S
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202

Query: 198 LISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAG 257
           +I+G VQ GS ++  ++F +M  + V      +  +L  C    N+  G Q+ ++  +  
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262

Query: 258 MNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQDYFD 317
           +N ++ + NA + MY KCG I  A   F++M  +D ++WTTM+  +  + D + A++  +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322

Query: 318 RMPARNVISWNSMLGAYFQNGFWEEGLKLY-ILMLRQEVRPDWITFVTTIRACSELAIAK 377
            MP +++++WN+++ AY QNG   E L ++  L L++ ++ + IT V+T+ AC+++   +
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382

Query: 378 LGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLISWNSIMGGYA 437
           LG  I S + K G+  +  V ++ I +YS+CG++E+++ +F+S++++++  W++++GG A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442

Query: 438 QNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATP 497
            +G G E +++F  M     KP+ +TF  V   CSH+GLV+EA+  F+ M  ++ I    
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502

Query: 498 EHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLA 557
           +H+AC+VD+ GR+G L++A+  I+ MP  P+ ++WGALL A +IH +  +AE+A   LL 
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562

Query: 558 LNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDT 617
           L   N  +++LL+N+Y+  G+ E VS++R+ MR  G++K+PGCS IE+   +H F   D 
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622

Query: 618 DHPLIKDIYKALEDIVKKIKDDHGYVDASS--------------SIGYHSEKLAIAFGLI 677
            HP+ + +Y  L ++++K+K  +GY    S              S+  HSEKLAI +GLI
Sbjct: 623 AHPMSEKVYGKLHEVMEKLK-SNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI 682

Query: 678 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           S      I V+KNLRVC DCH V KLIS +  R+++VRD +RFHH ++G CSC D+W
Sbjct: 683 STEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.7e-134
Identity = 252/700 (36.00%), Postives = 410/700 (58.57%), Query Frame = 0 

Query: 32  NSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWNSMIYGYSKLQKVGKALDTFIQMPERDSV 91
           N +I  Y++ G    A ++F  + +  L SWN MI GY + + +GKA + F  MPERD  
Sbjct: 99  NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158

Query: 92  SWNTIISAFSQHGLHTQSLSMFVEMWIQDCQPNPMTYASVLSACANIYDLQWGKHLHARI 151
           SWNT++S ++Q+G    + S+F  M     + N +++ ++LSA      ++        +
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEA----CML 218

Query: 152 VRFEPFLDVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVTWTSLISGIVQFGSREEVY 211
            +      ++  N L+  + K   I  +++ F+ +  R+VV+W ++I+G  Q G  +E  
Sbjct: 219 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 278

Query: 212 DIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAGMNSSVPVGNATVSMY 271
            +F    ++    D F   T   +  G     + E+      K    + V   NA ++ Y
Sbjct: 279 QLF----DESPVQDVF---TWTAMVSGYIQNRMVEEARELFDKMPERNEVS-WNAMLAGY 338

Query: 272 AKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQDYFDRMPARNVISWNSMLG 331
            +   +  A   F+ M  R+V +W TMIT +   G + +A++ FD+MP R+ +SW +M+ 
Sbjct: 339 VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 398

Query: 332 AYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELAIAKLGTQIVSQVVKAGLGS 391
            Y Q+G   E L+L++ M R+  R +  +F + +  C+++   +LG Q+  ++VK G  +
Sbjct: 399 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 458

Query: 392 DVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLISWNSIMGGYAQNGLGREVIEVFQNML 451
              V N+ + +Y +CG+IEEA  +F  +  K+++SWN+++ GY+++G G   +  F++M 
Sbjct: 459 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 518

Query: 452 MVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATPEHFACMVDLFGRAGLL 511
             G KPD  T VAVLS CSH+GLV++ + YF +MT+D+ +    +H+ACMVDL GRAGLL
Sbjct: 519 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 578

Query: 512 KQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLALNTENSESYILLANVY 571
           + A +++  MPF P+ AIWG LL ASR+H +TE+AE A   + A+  ENS  Y+LL+N+Y
Sbjct: 579 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 638

Query: 572 SSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDTDHPLIKDIYKALEDIV 631
           +S+GR   V  +R  MR+KGV+K PG SWIE+ N+ H F+V D  HP   +I+  LE++ 
Sbjct: 639 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELD 698

Query: 632 KKIKDDHGYVDASS-------------SIGYHSEKLAIAFGLISLPDWMPIHVMKNLRVC 691
            ++K   GYV  +S              + YHSE+LA+A+G++ +    PI V+KNLRVC
Sbjct: 699 LRMK-KAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVC 758

Query: 692 NDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
            DCH  +K ++ ++ R +++RD +RFHH KDG CSCGDYW
Sbjct: 759 EDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match: A0A6J1EIC0 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita moschata OX=3662 GN=LOC111434352 PE=3 SV=1)

HSP 1 Score: 1305.0 bits (3376), Expect = 0.0e+00
Identity = 624/717 (87.03%), Postives = 675/717 (94.14%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS++GY RIALQLHGL  KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 202 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 261

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 262 WNSMIYGYSKLHEMGRALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 321

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPN MTYASVLSACANIYD QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 322 QPNSMTYASVLSACANIYDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 381

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGS+EEVYDIF RMRED V MD FILATILGVCEGEEN
Sbjct: 382 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFCRMREDRVIMDGFILATILGVCEGEEN 441

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KA+LAFE+MAARDVISWTTMIT+
Sbjct: 442 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKANLAFETMAARDVISWTTMITS 501

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FT NG+V++AQDYFDRMP RNVISWNSML AYFQNG+WEEGLKLYI MLRQEVRPDW+TF
Sbjct: 502 FTRNGNVERAQDYFDRMPERNVISWNSMLSAYFQNGYWEEGLKLYICMLRQEVRPDWVTF 561

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
           VTTI +CSELAI+KLGTQIVSQ V+ GLGSDVSVANSAITLYSRCG IE+A  +FDSIQE
Sbjct: 562 VTTISSCSELAISKLGTQIVSQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIQE 621

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 622 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITYVAILSGCSHSGLVKEAKHY 681

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSMT+DF ISATPEHFACMVDLFGRAGLLK AMD+IDQMPF PNV IWG LLSA RIHH
Sbjct: 682 FNSMTKDFGISATPEHFACMVDLFGRAGLLKSAMDLIDQMPFKPNVTIWGTLLSACRIHH 741

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MREKGVQKDPGCSWI
Sbjct: 742 DTEMAEVAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMREKGVQKDPGCSWI 801

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT+HP IKDIYKALEDIVKKIKDD+GYVDASSSIGYHSEKLAIAFGLI
Sbjct: 802 EVSNRVHVFTVNDTNHPQIKDIYKALEDIVKKIKDDYGYVDASSSIGYHSEKLAIAFGLI 861

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 862 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 918

[Close]
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match: A0A6J1I7S2 (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471635 PE=3 SV=1)

HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 618/717 (86.19%), Postives = 672/717 (93.72%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS++GY RIALQLHGL  KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 202 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 261

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 262 WNSMIYGYSKLHEMGQALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 321

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPN MTYASVLSACANIYD QWGKHLHARI+R EP LDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 322 QPNSMTYASVLSACANIYDFQWGKHLHARIMRIEPILDVLVGNGLVDMYAKCGLIEASKR 381

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 382 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 441

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KA+LAFE+MAARDVISWT MIT+
Sbjct: 442 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKANLAFETMAARDVISWTAMITS 501

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FT NG+V++AQ YFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 502 FTRNGNVERAQYYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 561

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
           VTTI +CSELAI+KLGTQIVSQ V+ GLGSDVSVANSAITLYSRCG IE+A  +FDSIQE
Sbjct: 562 VTTISSCSELAISKLGTQIVSQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIQE 621

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 622 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITYVAILSGCSHSGLVKEAKHY 681

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSM++DF I ATPEHFACMVDLFGRAGLLK AMD+I QMPF PNV IWG LLSA RIHH
Sbjct: 682 FNSMSKDFGICATPEHFACMVDLFGRAGLLKSAMDLIGQMPFKPNVTIWGTLLSACRIHH 741

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MR+KGVQKDPGCSWI
Sbjct: 742 DTEMAEMAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMRQKGVQKDPGCSWI 801

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT+HP IKDI KALEDIVKKIKDD+GYVDASSSIGYHSEKLAIAFGLI
Sbjct: 802 EVSNRVHVFTVNDTNHPQIKDICKALEDIVKKIKDDYGYVDASSSIGYHSEKLAIAFGLI 861

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 862 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 918

[Close]
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match: A0A6J1IDK4 (pentatricopeptide repeat-containing protein At2g13600-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111471635 PE=3 SV=1)

HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 618/717 (86.19%), Postives = 672/717 (93.72%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS++GY RIALQLHGL  KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 55  ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 114

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 115 WNSMIYGYSKLHEMGQALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 174

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPN MTYASVLSACANIYD QWGKHLHARI+R EP LDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 175 QPNSMTYASVLSACANIYDFQWGKHLHARIMRIEPILDVLVGNGLVDMYAKCGLIEASKR 234

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 235 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 294

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KA+LAFE+MAARDVISWT MIT+
Sbjct: 295 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKANLAFETMAARDVISWTAMITS 354

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FT NG+V++AQ YFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 355 FTRNGNVERAQYYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 414

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
           VTTI +CSELAI+KLGTQIVSQ V+ GLGSDVSVANSAITLYSRCG IE+A  +FDSIQE
Sbjct: 415 VTTISSCSELAISKLGTQIVSQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIQE 474

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 475 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITYVAILSGCSHSGLVKEAKHY 534

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSM++DF I ATPEHFACMVDLFGRAGLLK AMD+I QMPF PNV IWG LLSA RIHH
Sbjct: 535 FNSMSKDFGICATPEHFACMVDLFGRAGLLKSAMDLIGQMPFKPNVTIWGTLLSACRIHH 594

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MR+KGVQKDPGCSWI
Sbjct: 595 DTEMAEMAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMRQKGVQKDPGCSWI 654

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT+HP IKDI KALEDIVKKIKDD+GYVDASSSIGYHSEKLAIAFGLI
Sbjct: 655 EVSNRVHVFTVNDTNHPQIKDICKALEDIVKKIKDDYGYVDASSSIGYHSEKLAIAFGLI 714

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 715 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 771

[Close]
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match: A0A6J1IC44 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471635 PE=3 SV=1)

HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 618/717 (86.19%), Postives = 672/717 (93.72%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS++GY RIALQLHGL  KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 174 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 233

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 234 WNSMIYGYSKLHEMGQALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 293

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPN MTYASVLSACANIYD QWGKHLHARI+R EP LDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 294 QPNSMTYASVLSACANIYDFQWGKHLHARIMRIEPILDVLVGNGLVDMYAKCGLIEASKR 353

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 354 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 413

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KA+LAFE+MAARDVISWT MIT+
Sbjct: 414 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKANLAFETMAARDVISWTAMITS 473

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FT NG+V++AQ YFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 474 FTRNGNVERAQYYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 533

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
           VTTI +CSELAI+KLGTQIVSQ V+ GLGSDVSVANSAITLYSRCG IE+A  +FDSIQE
Sbjct: 534 VTTISSCSELAISKLGTQIVSQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIQE 593

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 594 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITYVAILSGCSHSGLVKEAKHY 653

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSM++DF I ATPEHFACMVDLFGRAGLLK AMD+I QMPF PNV IWG LLSA RIHH
Sbjct: 654 FNSMSKDFGICATPEHFACMVDLFGRAGLLKSAMDLIGQMPFKPNVTIWGTLLSACRIHH 713

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MR+KGVQKDPGCSWI
Sbjct: 714 DTEMAEMAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMRQKGVQKDPGCSWI 773

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT+HP IKDI KALEDIVKKIKDD+GYVDASSSIGYHSEKLAIAFGLI
Sbjct: 774 EVSNRVHVFTVNDTNHPQIKDICKALEDIVKKIKDDYGYVDASSSIGYHSEKLAIAFGLI 833

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 834 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 890

[Close]
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match: A0A6J1CM06 (pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charantia OX=3673 GN=LOC111012528 PE=3 SV=1)

HSP 1 Score: 1281.9 bits (3316), Expect = 0.0e+00
Identity = 616/717 (85.91%), Postives = 662/717 (92.33%), Query Frame = 0 

Query: 2   ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
           ACS+LGY RIALQLHGL+EKYG  N+EA++NSVIDMYVKCG+VYAAEEVF+RIEKPSLFS
Sbjct: 205 ACSSLGYVRIALQLHGLVEKYGFRNDEAIRNSVIDMYVKCGAVYAAEEVFMRIEKPSLFS 264

Query: 62  WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
           WNSMIYGYSK   +G+ALDTFIQMPE DSVSW+ IISAFSQHGLHTQSL MFVEMWIQDC
Sbjct: 265 WNSMIYGYSKSYGIGQALDTFIQMPEHDSVSWSMIISAFSQHGLHTQSLGMFVEMWIQDC 324

Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
           QPN +TYASVLSACAN+YDLQWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGL+EAS++
Sbjct: 325 QPNSITYASVLSACANVYDLQWGKHLHARIVRNEPFLDVLVGNGLVDMYAKCGLVEASRR 384

Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
           VFN LT+RNVVTWTSLISGI QFGSREEV+D+FYRMRE CVAMD+F LATILGVCEGEEN
Sbjct: 385 VFNSLTERNVVTWTSLISGIAQFGSREEVFDLFYRMREACVAMDEFTLATILGVCEGEEN 444

Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
           ISIGEQLH FTVK GM+SSVPVGNATV+MYAKCG I K SLAFE+M ARD++SWT MIT 
Sbjct: 445 ISIGEQLHGFTVKTGMDSSVPVGNATVTMYAKCGNIEKGSLAFETMPARDIVSWTAMITM 504

Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
           FTH+GDV+KA+DYFDRMP RNVISWNSMLGA FQNGFWEEGLKLYILMLRQEVRPDWITF
Sbjct: 505 FTHSGDVEKARDYFDRMPERNVISWNSMLGACFQNGFWEEGLKLYILMLRQEVRPDWITF 564

Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
            TTI ACSELA  KLGTQIVSQ  KAGLGSDVSVANSAITLYSRCG IEEAQ IFDSIQE
Sbjct: 565 ATTISACSELATLKLGTQIVSQAKKAGLGSDVSVANSAITLYSRCGKIEEAQNIFDSIQE 624

Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
           KNLISWNSIMGGYAQNG GR+VIEVFQNML+VGCKPDHIT+VA+LSGCSHSGLV+E KHY
Sbjct: 625 KNLISWNSIMGGYAQNGQGRKVIEVFQNMLVVGCKPDHITYVAILSGCSHSGLVKEGKHY 684

Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
           FNSMT DF IS T EHFACMVDLFGRAGLLKQ+MD+IDQMPF PN AIW ALLSA RIHH
Sbjct: 685 FNSMTEDFGISPTSEHFACMVDLFGRAGLLKQSMDLIDQMPFKPNAAIWSALLSACRIHH 744

Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
           DTEMAELA+KNLL LN E+S SYILLANVYS+ GRL+ VSDVRQ M+EKGVQKDPGCSWI
Sbjct: 745 DTEMAELAMKNLLELNVESSGSYILLANVYSNYGRLKSVSDVRQAMKEKGVQKDPGCSWI 804

Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
           EV NRVHVFTVNDT+HP  KDIYKALEDIVKKI+D +GYVD SSS+GYHSEKLAIAFGLI
Sbjct: 805 EVSNRVHVFTVNDTNHPQTKDIYKALEDIVKKIEDAYGYVDMSSSVGYHSEKLAIAFGLI 864

Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           SLP WMPIHVMKNLRVC+DCH+VMKLISLV+MRKLVVRDGHRFHHLKDGICSCGDYW
Sbjct: 865 SLPGWMPIHVMKNLRVCDDCHRVMKLISLVAMRKLVVRDGHRFHHLKDGICSCGDYW 921

[Close]
BLAST of Sed0008978 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 516.5 bits (1329), Expect = 3.3e-146
Identity = 285/763 (37.35%), Postives = 437/763 (57.27%), Query Frame = 0 

Query: 5   NLGYARIALQL-HGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWN 64
           N    R   QL H  + K G+  +  + N+++++Y K G    A ++F  +   + FSWN
Sbjct: 25  NKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWN 84

Query: 65  SMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDCQP 124
           +++  YSK   +    + F Q+P+RDSVSW T+I  +   G + +++ +  +M  +  +P
Sbjct: 85  TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144

Query: 125 NPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKKVF 184
              T  +VL++ A    ++ GK +H+ IV+     +V V N L++MYAKCG    +K VF
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204

Query: 185 N-------------------------------LLTKRNVVTWTSLISGIVQFGSREEVYD 244
           +                                + +R++VTW S+ISG  Q G      D
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264

Query: 245 IFYRM-REDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAGMNSSVPVGNATVSMY 304
           IF +M R+  ++ D F LA++L  C   E + IG+Q+H+  V  G + S  V NA +SMY
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324

Query: 305 AKCGEIGKASLAFESMAARD--VISWTTMITAFTHNGDVQKAQDYFDRMPARNVISWNSM 364
           ++CG +  A    E    +D  +  +T ++  +   GD+ +A++ F  +  R+V++W +M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384

Query: 365 LGAYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELAIAKLGTQIVSQVVKAGL 424
           +  Y Q+G + E + L+  M+    RP+  T    +   S LA    G QI    VK+G 
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444

Query: 425 GSDVSVANSAITLYSRCGNIEEAQTIFDSIQ-EKNLISWNSIMGGYAQNGLGREVIEVFQ 484
              VSV+N+ IT+Y++ GNI  A   FD I+ E++ +SW S++   AQ+G   E +E+F+
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504

Query: 485 NMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATPEHFACMVDLFGRA 544
            MLM G +PDHIT+V V S C+H+GLV + + YF+ M     I  T  H+ACMVDLFGRA
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564

Query: 545 GLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLALNTENSESYILLA 604
           GLL++A + I++MP  P+V  WG+LLSA R+H + ++ ++A + LL L  ENS +Y  LA
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALA 624

Query: 605 NVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDTDHPLIKDIYKALE 664
           N+YS+ G+ E  + +R+ M++  V+K+ G SWIEV ++VHVF V D  HP   +IY  ++
Sbjct: 625 NLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMK 684

Query: 665 DIVKKIKDDHGYVDASSSI-------------GYHSEKLAIAFGLISLPDWMPIHVMKNL 719
            I  +IK   GYV  ++S+              +HSEKLAIAFGLIS PD   + +MKNL
Sbjct: 685 KIWDEIK-KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNL 744

[Close]
BLAST of Sed0008978 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 511.1 bits (1315), Expect = 1.4e-144
Identity = 251/639 (39.28%), Postives = 393/639 (61.50%), Query Frame = 0 

Query: 15  LHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWNSMIYGYSKLQK 74
           +H  + K G  N   +QN +ID Y KCGS+    +VF ++ + ++++WNS++ G +KL  
Sbjct: 42  VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101

Query: 75  VGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDCQPNPMTYASVLSA 134
           + +A   F  MPERD  +WN+++S F+QH    ++L  F  M  +    N  ++ASVLSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161

Query: 135 CANIYDLQWGKHLHARIVRFEPFL-DVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVT 194
           C+ + D+  G  +H+ I +  PFL DV +G+ LVDMY+KCG +  +++VF+ +  RNVV+
Sbjct: 162 CSGLNDMNKGVQVHSLIAK-SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 221

Query: 195 WTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTV 254
           W SLI+   Q G   E  D+F  M E  V  D+  LA+++  C     I +G+++H   V
Sbjct: 222 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 281

Query: 255 KAG-MNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQ 314
           K   + + + + NA V MYAKC  I +A   F+SM  R+VI+ T+MI+ +      + A+
Sbjct: 282 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 341

Query: 315 DYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELA 374
             F +M  RNV+SWN+++  Y QNG  EE L L+ L+ R+ V P   +F   ++AC++LA
Sbjct: 342 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 401

Query: 375 IAKLGTQIVSQVVK------AGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLIS 434
              LG Q    V+K      +G   D+ V NS I +Y +CG +EE   +F  + E++ +S
Sbjct: 402 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 461

Query: 435 WNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMT 494
           WN+++ G+AQNG G E +E+F+ ML  G KPDHIT + VLS C H+G VEE +HYF+SMT
Sbjct: 462 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 521

Query: 495 RDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMA 554
           RDF ++   +H+ CMVDL GRAG L++A  +I++MP  P+  IWG+LL+A ++H +  + 
Sbjct: 522 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLG 581

Query: 555 ELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNR 614
           +   + LL +   NS  Y+LL+N+Y+  G+ E V +VR+ MR++GV K PGCSWI++   
Sbjct: 582 KYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGH 641

Query: 615 VHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASS 646
            HVF V D  HP  K I+  L+ ++ +++ +  + +  S
Sbjct: 642 DHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGS 679

[Close]
BLAST of Sed0008978 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 491.9 bits (1265), Expect = 8.8e-139
Identity = 253/731 (34.61%), Postives = 405/731 (55.40%), Query Frame = 0 

Query: 1    MACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLF 60
            +ACS  G      QLH    K G  +N  ++ +++++Y KC  +  A + FL  E  ++ 
Sbjct: 397  VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456

Query: 61   SWNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQD 120
             WN M+  Y  L  +                                 S  +F +M I++
Sbjct: 457  LWNVMLVAYGLLDDL-------------------------------RNSFRIFRQMQIEE 516

Query: 121  CQPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASK 180
              PN  TY S+L  C  + DL+ G+ +H++I++    L+  V + L+DMYAK G ++ + 
Sbjct: 517  IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 576

Query: 181  KVFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEE 240
             +      ++VV+WT++I+G  Q+   ++    F +M +  +  D+  L   +  C G +
Sbjct: 577  DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 636

Query: 241  NISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMIT 300
             +  G+Q+HA    +G +S +P  NA V++Y++CG+I ++ LAFE   A D I+W  +++
Sbjct: 637  ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 696

Query: 301  AFTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWIT 360
             F                                Q+G  EE L++++ M R+ +  +  T
Sbjct: 697  GFQ-------------------------------QSGNNEEALRVFVRMNREGIDNNNFT 756

Query: 361  FVTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQ 420
            F + ++A SE A  K G Q+ + + K G  S+  V N+ I++Y++CG+I +A+  F  + 
Sbjct: 757  FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 816

Query: 421  EKNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKH 480
             KN +SWN+I+  Y+++G G E ++ F  M+    +P+H+T V VLS CSH GLV++   
Sbjct: 817  TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIA 876

Query: 481  YFNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIH 540
            YF SM  ++ +S  PEH+ C+VD+  RAGLL +A + I +MP  P+  +W  LLSA  +H
Sbjct: 877  YFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 936

Query: 541  HDTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSW 600
             + E+ E A  +LL L  E+S +Y+LL+N+Y+ + + +     RQ M+EKGV+K+PG SW
Sbjct: 937  KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSW 996

Query: 601  IEVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSS-------------I 660
            IEV N +H F V D +HPL  +I++  +D+ K+   + GYV    S             I
Sbjct: 997  IEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLLNELQHEQKDPII 1056

Query: 661  GYHSEKLAIAFGLISLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL 719
              HSEKLAI+FGL+SLP  +PI+VMKNLRVCNDCH  +K +S VS R+++VRD +RFHH 
Sbjct: 1057 FIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHF 1064

[Close]
BLAST of Sed0008978 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 483.4 bits (1243), Expect = 3.1e-136
Identity = 232/657 (35.31%), Postives = 400/657 (60.88%), Query Frame = 0 

Query: 78  ALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQ-DCQPNPMTYASVLSACA 137
           A   F ++P+ +S +WNT+I A++       S+  F++M  +  C PN  T+  ++ A A
Sbjct: 83  ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142

Query: 138 NIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVTWTS 197
            +  L  G+ LH   V+     DV V N L+  Y  CG ++++ KVF  + +++VV+W S
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202

Query: 198 LISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAG 257
           +I+G VQ GS ++  ++F +M  + V      +  +L  C    N+  G Q+ ++  +  
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262

Query: 258 MNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQDYFD 317
           +N ++ + NA + MY KCG I  A   F++M  +D ++WTTM+  +  + D + A++  +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322

Query: 318 RMPARNVISWNSMLGAYFQNGFWEEGLKLY-ILMLRQEVRPDWITFVTTIRACSELAIAK 377
            MP +++++WN+++ AY QNG   E L ++  L L++ ++ + IT V+T+ AC+++   +
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382

Query: 378 LGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLISWNSIMGGYA 437
           LG  I S + K G+  +  V ++ I +YS+CG++E+++ +F+S++++++  W++++GG A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442

Query: 438 QNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATP 497
            +G G E +++F  M     KP+ +TF  V   CSH+GLV+EA+  F+ M  ++ I    
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502

Query: 498 EHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLA 557
           +H+AC+VD+ GR+G L++A+  I+ MP  P+ ++WGALL A +IH +  +AE+A   LL 
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562

Query: 558 LNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDT 617
           L   N  +++LL+N+Y+  G+ E VS++R+ MR  G++K+PGCS IE+   +H F   D 
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622

Query: 618 DHPLIKDIYKALEDIVKKIKDDHGYVDASS--------------SIGYHSEKLAIAFGLI 677
            HP+ + +Y  L ++++K+K  +GY    S              S+  HSEKLAI +GLI
Sbjct: 623 AHPMSEKVYGKLHEVMEKLK-SNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI 682

Query: 678 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
           S      I V+KNLRVC DCH V KLIS +  R+++VRD +RFHH ++G CSC D+W
Sbjct: 683 STEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of Sed0008978 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 481.5 bits (1238), Expect = 1.2e-135
Identity = 252/700 (36.00%), Postives = 410/700 (58.57%), Query Frame = 0 

Query: 32  NSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWNSMIYGYSKLQKVGKALDTFIQMPERDSV 91
           N +I  Y++ G    A ++F  + +  L SWN MI GY + + +GKA + F  MPERD  
Sbjct: 99  NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158

Query: 92  SWNTIISAFSQHGLHTQSLSMFVEMWIQDCQPNPMTYASVLSACANIYDLQWGKHLHARI 151
           SWNT++S ++Q+G    + S+F  M     + N +++ ++LSA      ++        +
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEA----CML 218

Query: 152 VRFEPFLDVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVTWTSLISGIVQFGSREEVY 211
            +      ++  N L+  + K   I  +++ F+ +  R+VV+W ++I+G  Q G  +E  
Sbjct: 219 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 278

Query: 212 DIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAGMNSSVPVGNATVSMY 271
            +F    ++    D F   T   +  G     + E+      K    + V   NA ++ Y
Sbjct: 279 QLF----DESPVQDVF---TWTAMVSGYIQNRMVEEARELFDKMPERNEVS-WNAMLAGY 338

Query: 272 AKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQDYFDRMPARNVISWNSMLG 331
            +   +  A   F+ M  R+V +W TMIT +   G + +A++ FD+MP R+ +SW +M+ 
Sbjct: 339 VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 398

Query: 332 AYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELAIAKLGTQIVSQVVKAGLGS 391
            Y Q+G   E L+L++ M R+  R +  +F + +  C+++   +LG Q+  ++VK G  +
Sbjct: 399 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 458

Query: 392 DVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLISWNSIMGGYAQNGLGREVIEVFQNML 451
              V N+ + +Y +CG+IEEA  +F  +  K+++SWN+++ GY+++G G   +  F++M 
Sbjct: 459 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 518

Query: 452 MVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATPEHFACMVDLFGRAGLL 511
             G KPD  T VAVLS CSH+GLV++ + YF +MT+D+ +    +H+ACMVDL GRAGLL
Sbjct: 519 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 578

Query: 512 KQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLALNTENSESYILLANVY 571
           + A +++  MPF P+ AIWG LL ASR+H +TE+AE A   + A+  ENS  Y+LL+N+Y
Sbjct: 579 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 638

Query: 572 SSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDTDHPLIKDIYKALEDIV 631
           +S+GR   V  +R  MR+KGV+K PG SWIE+ N+ H F+V D  HP   +I+  LE++ 
Sbjct: 639 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELD 698

Query: 632 KKIKDDHGYVDASS-------------SIGYHSEKLAIAFGLISLPDWMPIHVMKNLRVC 691
            ++K   GYV  +S              + YHSE+LA+A+G++ +    PI V+KNLRVC
Sbjct: 699 LRMK-KAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVC 758

Query: 692 NDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
            DCH  +K ++ ++ R +++RD +RFHH KDG CSCGDYW
Sbjct: 759 EDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

The following BLAST results are available for this feature:
BLAST of Sed0008978 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038894464.10.0e+0087.45pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Benincasa... [more]
XP_038894463.10.0e+0087.45pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Benincasa... [more]
XP_023520697.10.0e+0087.31pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita... [more]
XP_023520702.10.0e+0087.31pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Cucurbita... [more]
XP_023520703.10.0e+0087.31pentatricopeptide repeat-containing protein At2g13600-like isoform X3 [Cucurbita... [more]
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SHZ84.7e-14537.35Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Q9SIT72.0e-14339.28Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Q9SVP71.2e-13734.61Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
O823804.4e-13535.31Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9SY021.7e-13436.00Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EIC00.0e+0087.03pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita moschata... [more]
A0A6J1I7S20.0e+0086.19pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucurbi... [more]
A0A6J1IDK40.0e+0086.19pentatricopeptide repeat-containing protein At2g13600-like isoform X3 OS=Cucurbi... [more]
A0A6J1IC440.0e+0086.19pentatricopeptide repeat-containing protein At2g13600-like isoform X2 OS=Cucurbi... [more]
A0A6J1CM060.0e+0085.91pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charanti... [more]
BLAST of Sed0008978 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G22070.13.3e-14637.35pentatricopeptide (PPR) repeat-containing protein [more]
AT2G13600.11.4e-14439.28Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G13650.18.8e-13934.61Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G29760.13.1e-13635.31Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02750.11.2e-13536.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 145..247
e-value: 1.3E-14
score: 56.0
coord: 1..143
e-value: 5.1E-26
score: 93.1
coord: 248..375
e-value: 3.9E-28
score: 100.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 492..641
e-value: 2.3E-9
score: 39.1
coord: 376..491
e-value: 2.0E-26
score: 95.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 302..578
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 596..708
e-value: 1.6E-25
score: 89.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 164..191
e-value: 0.49
score: 10.8
coord: 60..88
e-value: 4.2E-5
score: 23.5
coord: 32..55
e-value: 0.14
score: 12.5
coord: 192..220
e-value: 7.7E-4
score: 19.5
coord: 500..521
e-value: 0.36
score: 11.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 89..137
e-value: 5.2E-9
score: 36.2
coord: 422..470
e-value: 2.0E-9
score: 37.5
coord: 321..368
e-value: 2.9E-9
score: 37.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 60..89
e-value: 7.0E-5
score: 20.7
coord: 324..358
e-value: 8.5E-7
score: 26.8
coord: 425..458
e-value: 5.4E-7
score: 27.4
coord: 192..225
e-value: 0.0027
score: 15.8
coord: 293..322
e-value: 2.9E-4
score: 18.8
coord: 91..124
e-value: 1.2E-5
score: 23.2
coord: 460..487
e-value: 7.5E-4
score: 17.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 458..488
score: 8.506026
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 58..88
score: 8.922556
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 322..356
score: 11.673842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 190..224
score: 9.284279
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..321
score: 9.536388
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 89..123
score: 10.446177
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 423..457
score: 11.498462
NoneNo IPR availablePANTHERPTHR24015:SF1900PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 304..679
coord: 2..82
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 2..82
NoneNo IPR availablePANTHERPTHR24015:SF1900PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 243..306
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 243..306
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 304..679
coord: 80..238
NoneNo IPR availablePANTHERPTHR24015:SF1900PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 80..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008978.1Sed0008978.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding