Sed0008951 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCTTTTCTCTCTCCTCCTTTCTCTCTCACACACAAACTTCAAACAAACAAAGAGAAAAACCCAAAAAAAAGCTTCAACCTTTCTCATCCATGGCTTCCCTGGTTGGCTCCTCTCCAACTTCTTCAACTCCAAACAAACCCCCCTTCTATTTTGATGAAAAATGGAAGATTTCAAAGAAACAATCCCTTAATCCTCACAGAAGGTGCTCTTTTACAAGAAAGTGCGCCAAATTGGTCAAAGAACAAAGGGCTCGATTCTACATCATGAGACGCTGCGTCACCATGCTCATCTGCTGGCACGATTACACCGACTCTTGATCCGACCCAGATCGTAAAACTCATCAATCTCAAATACCCATATGATAGAAATTGAAATTTCTCTCGTTTTTTCATATGGGTTGGTTCAGAATCCAGTTTCTGAGCAGAACAGAGCAGAATAGAGCAAGAAGATGAAGAAATGGAAATCCAATATGTTTGTGAACATCTTTTTTACTTTTTTTTCCCTGTTTACTTTTTTTTACTGTTGGGATGAAAACAGTGTGCAGAAACAAGAAAGGAAAACAGGGTTTGAAAAGGAAAGAGTATGAGAATCGGATTAAAAGAGGAATGAATCTTTAAATGAAAAAGAAACGAAACTACTTTTGATGTTTTGATTTGAATCCACTTCCATTTTGATGGCTATTGTTGTTGTTGTTGTACATGG CCCCTTTTCTCTCTCCTCCTTTCTCTCTCACACACAAACTTCAAACAAACAAAGAGAAAAACCCAAAAAAAAGCTTCAACCTTTCTCATCCATGGCTTCCCTGGTTGGCTCCTCTCCAACTTCTTCAACTCCAAACAAACCCCCCTTCTATTTTGATGAAAAATGGAAGATTTCAAAGAAACAATCCCTTAATCCTCACAGAAGGTGCTCTTTTACAAGAAAGTGCGCCAAATTGGTCAAAGAACAAAGGGCTCGATTCTACATCATGAGACGCTGCGTCACCATGCTCATCTGCTGGCACGATTACACCGACTCTTGATCCGACCCAGATCGTAAAACTCATCAATCTCAAATACCCATATGATAGAAATTGAAATTTCTCTCGTTTTTTCATATGGGTTGGTTCAGAATCCAGTTTCTGAGCAGAACAGAGCAGAATAGAGCAAGAAGATGAAGAAATGGAAATCCAATATGTTTGTGAACATCTTTTTTACTTTTTTTTCCCTGTTTACTTTTTTTTACTGTTGGGATGAAAACAGTGTGCAGAAACAAGAAAGGAAAACAGGGTTTGAAAAGGAAAGAGTATGAGAATCGGATTAAAAGAGGAATGAATCTTTAAATGAAAAAGAAACGAAACTACTTTTGATGTTTTGATTTGAATCCACTTCCATTTTGATGGCTATTGTTGTTGTTGTTGTACATGG ATGGCTTCCCTGGTTGGCTCCTCTCCAACTTCTTCAACTCCAAACAAACCCCCCTTCTATTTTGATGAAAAATGGAAGATTTCAAAGAAACAATCCCTTAATCCTCACAGAAGGTGCTCTTTTACAAGAAAGTGCGCCAAATTGGTCAAAGAACAAAGGGCTCGATTCTACATCATGAGACGCTGCGTCACCATGCTCATCTGCTGGCACGATTACACCGACTCTTGA MASLVGSSPTSSTPNKPPFYFDEKWKISKKQSLNPHRRCSFTRKCAKLVKEQRARFYIMRRCVTMLICWHDYTDS Homology
BLAST of Sed0008951 vs. NCBI nr
Match: KGN51326.1 (hypothetical protein Csa_009192 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 4.1e-25 Identity = 62/93 (66.67%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of Sed0008951 vs. NCBI nr
Match: KAG6602389.1 (hypothetical protein SDJN03_07622, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033066.1 hypothetical protein SDJN02_07119, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24 Identity = 61/90 (67.78%), Postives = 69/90 (76.67%), Query Frame = 0
BLAST of Sed0008951 vs. NCBI nr
Match: XP_022938385.1 (uncharacterized protein LOC111444651 [Cucurbita moschata] >KAG6578688.1 hypothetical protein SDJN03_23136, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016227.1 hypothetical protein SDJN02_21333, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 114.4 bits (285), Expect = 4.3e-22 Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 0
BLAST of Sed0008951 vs. NCBI nr
Match: XP_030489665.1 (uncharacterized protein LOC115706227 [Cannabis sativa] >KAF4351948.1 hypothetical protein G4B88_020576 [Cannabis sativa] >KAF4354477.1 hypothetical protein G4B88_019946 [Cannabis sativa] >KAF4365408.1 hypothetical protein F8388_012773 [Cannabis sativa] >KAF4386234.1 hypothetical protein F8388_016486 [Cannabis sativa]) HSP 1 Score: 112.5 bits (280), Expect = 1.6e-21 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Sed0008951 vs. NCBI nr
Match: KAG7998937.1 (hypothetical protein I3843_01G280700 [Carya illinoinensis]) HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21 Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.2e-12 Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.1e-09 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.1e-08 Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy Swiss-Prot
Match: Q6IM91 (Small polypeptide DEVIL 10 OS=Arabidopsis thaliana OX=3702 GN=DVL10 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.0e-07 Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.0e-07 Identity = 20/32 (62.50%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy TrEMBL
Match: A0A0A0KUB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517730 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.0e-25 Identity = 62/93 (66.67%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy TrEMBL
Match: A0A6J1FJM7 (uncharacterized protein LOC111444651 OS=Cucurbita moschata OX=3662 GN=LOC111444651 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22 Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy TrEMBL
Match: A0A7J6E7R9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012773 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 7.9e-22 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy TrEMBL
Match: A0A803P143 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 7.9e-22 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Sed0008951 vs. ExPASy TrEMBL
Match: A0A314YPC2 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_29730 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.7e-21 Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of Sed0008951 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 ) HSP 1 Score: 72.0 bits (175), Expect = 2.3e-13 Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of Sed0008951 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 ) HSP 1 Score: 63.5 bits (153), Expect = 8.1e-11 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of Sed0008951 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 ) HSP 1 Score: 59.3 bits (142), Expect = 1.5e-09 Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of Sed0008951 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein ) HSP 1 Score: 55.1 bits (131), Expect = 2.9e-08 Identity = 20/32 (62.50%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of Sed0008951 vs. TAIR 10
Match: AT4G13395.1 (ROTUNDIFOLIA like 12 ) HSP 1 Score: 55.1 bits (131), Expect = 2.9e-08 Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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