Sed0008919 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAATCCTATTTCGTTTGGATCCCCACATGCTGACAAGATAACAAGACCTTAACTAAATAATCGTAGGACATCAAAATTTTGGAGACATATCTGAACAACTACTATGTCGTAACATATGTCAAACCTAACATATCAGGACTCTATTGAGCACTAATTTTGAAACAGGCTAAAACACACTTGCATCTATAAATCCCCCCATTTGCAGACTCTGCTCATTTACCCAACTTTCCCAGCTCTGACACAATCATTTTCTTTCCCCCATTTCCCTGAATCCAAACACCCACCTAGAGAGGAAAAGAAAAGAAAAAAATGGTTTCCATTGACAGTAGTAGTGTTCAAGCATCACCACCATCCACAGAACCAAATTCCAGTCCAAGGATATCATTCTCTTCTGAGTTTCTTGATGAAAGCAACTTCATTTCCATCACCCCCAATTCCCATACAGAGAGGGATCAAGAAATTTACAAGAGATCAGAGAAGCTGGCATGGAGTGCTGATTTTGAGTTCCTTTCCAACAAAGTTAGCAGCCACTCCATGATTGCAGCAGATGAGCTCTTCTTTGAAGGGAAGCTTCTCCCCTTTTGGGAAATGCAACAACAAGAGAGGCTCAACAAAATCACCCTCAAATCTCCAAAACATGTAGAAGAAGACTTTGTGGAGATTGAGGTAAAAAAAGAGGCAGAGAACAAAGTGAATTGGTTCCTCGACGACGACCCGTCTCCGAGGCCGCCGAAATGCACTGTTCTCTGGAAAGAATTGCTGAGGTTGAAGAAGCAACGAGCTGTGCTATCGCCGTCGTCTTCTTCGTCGTCGTCGTCGTCTTCTTCCAAGTCGATGGCGGATGCAGCCACCACAGAGGAAGGCAAGGAAGGGAAAACAGCAATCAACAAAGATAAGAATGTGAAGAGGATGAAGAAAGGATTGGAGAGAACAAGATCAGCCAGTATAAGAATAAGGCCTATGATTAATGTGCCAATCTGCACACAGGTGAAGAGCAGTGTTTTGCCACCCTTGTTCCCACTTAAGAAAGGAAGGTTTGAGATGAGAAGATGAAATTAGCTAAAGATCTCATTTCTTGACACTTTTTTTCAACTTTCTTTCTTTCTGAGTGTAT CCCAAATCCTATTTCGTTTGGATCCCCACATGCTGACAAGATAACAAGACCTTAACTAAATAATCGTAGGACATCAAAATTTTGGAGACATATCTGAACAACTACTATGTCGTAACATATGTCAAACCTAACATATCAGGACTCTATTGAGCACTAATTTTGAAACAGGCTAAAACACACTTGCATCTATAAATCCCCCCATTTGCAGACTCTGCTCATTTACCCAACTTTCCCAGCTCTGACACAATCATTTTCTTTCCCCCATTTCCCTGAATCCAAACACCCACCTAGAGAGGAAAAGAAAAGAAAAAAATGGTTTCCATTGACAGTAGTAGTGTTCAAGCATCACCACCATCCACAGAACCAAATTCCAGTCCAAGGATATCATTCTCTTCTGAGTTTCTTGATGAAAGCAACTTCATTTCCATCACCCCCAATTCCCATACAGAGAGGGATCAAGAAATTTACAAGAGATCAGAGAAGCTGGCATGGAGTGCTGATTTTGAGTTCCTTTCCAACAAAGTTAGCAGCCACTCCATGATTGCAGCAGATGAGCTCTTCTTTGAAGGGAAGCTTCTCCCCTTTTGGGAAATGCAACAACAAGAGAGGCTCAACAAAATCACCCTCAAATCTCCAAAACATGTAGAAGAAGACTTTGTGGAGATTGAGGTAAAAAAAGAGGCAGAGAACAAAGTGAATTGGTTCCTCGACGACGACCCGTCTCCGAGGCCGCCGAAATGCACTGTTCTCTGGAAAGAATTGCTGAGGTTGAAGAAGCAACGAGCTGTGCTATCGCCGTCGTCTTCTTCGTCGTCGTCGTCGTCTTCTTCCAAGTCGATGGCGGATGCAGCCACCACAGAGGAAGGCAAGGAAGGGAAAACAGCAATCAACAAAGATAAGAATGTGAAGAGGATGAAGAAAGGATTGGAGAGAACAAGATCAGCCAGTATAAGAATAAGGCCTATGATTAATGTGCCAATCTGCACACAGGTGAAGAGCAGTGTTTTGCCACCCTTGTTCCCACTTAAGAAAGGAAGGTTTGAGATGAGAAGATGAAATTAGCTAAAGATCTCATTTCTTGACACTTTTTTTCAACTTTCTTTCTTTCTGAGTGTAT ATGGTTTCCATTGACAGTAGTAGTGTTCAAGCATCACCACCATCCACAGAACCAAATTCCAGTCCAAGGATATCATTCTCTTCTGAGTTTCTTGATGAAAGCAACTTCATTTCCATCACCCCCAATTCCCATACAGAGAGGGATCAAGAAATTTACAAGAGATCAGAGAAGCTGGCATGGAGTGCTGATTTTGAGTTCCTTTCCAACAAAGTTAGCAGCCACTCCATGATTGCAGCAGATGAGCTCTTCTTTGAAGGGAAGCTTCTCCCCTTTTGGGAAATGCAACAACAAGAGAGGCTCAACAAAATCACCCTCAAATCTCCAAAACATGTAGAAGAAGACTTTGTGGAGATTGAGGTAAAAAAAGAGGCAGAGAACAAAGTGAATTGGTTCCTCGACGACGACCCGTCTCCGAGGCCGCCGAAATGCACTGTTCTCTGGAAAGAATTGCTGAGGTTGAAGAAGCAACGAGCTGTGCTATCGCCGTCGTCTTCTTCGTCGTCGTCGTCGTCTTCTTCCAAGTCGATGGCGGATGCAGCCACCACAGAGGAAGGCAAGGAAGGGAAAACAGCAATCAACAAAGATAAGAATGTGAAGAGGATGAAGAAAGGATTGGAGAGAACAAGATCAGCCAGTATAAGAATAAGGCCTATGATTAATGTGCCAATCTGCACACAGGTGAAGAGCAGTGTTTTGCCACCCTTGTTCCCACTTAAGAAAGGAAGGTTTGAGATGAGAAGATGA MVSIDSSSVQASPPSTEPNSSPRISFSSEFLDESNFISITPNSHTERDQEIYKRSEKLAWSADFEFLSNKVSSHSMIAADELFFEGKLLPFWEMQQQERLNKITLKSPKHVEEDFVEIEVKKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRAVLSPSSSSSSSSSSSKSMADAATTEEGKEGKTAINKDKNVKRMKKGLERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKKGRFEMRR Homology
BLAST of Sed0008919 vs. NCBI nr
Match: XP_038876013.1 (uncharacterized protein LOC120068347 [Benincasa hispida]) HSP 1 Score: 385.2 bits (988), Expect = 4.3e-103 Identity = 222/259 (85.71%), Postives = 229/259 (88.42%), Query Frame = 0
BLAST of Sed0008919 vs. NCBI nr
Match: XP_022138704.1 (uncharacterized protein LOC111009802 [Momordica charantia]) HSP 1 Score: 383.6 bits (984), Expect = 1.2e-102 Identity = 218/261 (83.52%), Postives = 228/261 (87.36%), Query Frame = 0
BLAST of Sed0008919 vs. NCBI nr
Match: XP_004140154.1 (uncharacterized protein LOC101216953 [Cucumis sativus] >KAE8647357.1 hypothetical protein Csa_003743 [Cucumis sativus]) HSP 1 Score: 379.8 bits (974), Expect = 1.8e-101 Identity = 222/261 (85.06%), Postives = 230/261 (88.12%), Query Frame = 0
BLAST of Sed0008919 vs. NCBI nr
Match: XP_008449565.1 (PREDICTED: uncharacterized protein LOC103491410 [Cucumis melo] >KAA0061706.1 SEY1 [Cucumis melo var. makuwa] >TYK21181.1 SEY1 [Cucumis melo var. makuwa]) HSP 1 Score: 377.1 bits (967), Expect = 1.2e-100 Identity = 220/261 (84.29%), Postives = 229/261 (87.74%), Query Frame = 0
BLAST of Sed0008919 vs. NCBI nr
Match: XP_022930387.1 (uncharacterized protein LOC111436849 [Cucurbita moschata] >XP_023000022.1 uncharacterized protein LOC111494331 [Cucurbita maxima] >XP_023513461.1 uncharacterized protein LOC111778063 [Cucurbita pepo subsp. pepo] >KAG7026246.1 hypothetical protein SDJN02_12745, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 366.7 bits (940), Expect = 1.6e-97 Identity = 210/254 (82.68%), Postives = 225/254 (88.58%), Query Frame = 0
BLAST of Sed0008919 vs. ExPASy TrEMBL
Match: A0A6J1CAV2 (uncharacterized protein LOC111009802 OS=Momordica charantia OX=3673 GN=LOC111009802 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 6.0e-103 Identity = 218/261 (83.52%), Postives = 228/261 (87.36%), Query Frame = 0
BLAST of Sed0008919 vs. ExPASy TrEMBL
Match: A0A5D3DC08 (SEY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00530 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 5.7e-101 Identity = 220/261 (84.29%), Postives = 229/261 (87.74%), Query Frame = 0
BLAST of Sed0008919 vs. ExPASy TrEMBL
Match: A0A1S3BMY8 (uncharacterized protein LOC103491410 OS=Cucumis melo OX=3656 GN=LOC103491410 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 5.7e-101 Identity = 220/261 (84.29%), Postives = 229/261 (87.74%), Query Frame = 0
BLAST of Sed0008919 vs. ExPASy TrEMBL
Match: A0A6J1KCD5 (uncharacterized protein LOC111494331 OS=Cucurbita maxima OX=3661 GN=LOC111494331 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 7.6e-98 Identity = 210/254 (82.68%), Postives = 225/254 (88.58%), Query Frame = 0
BLAST of Sed0008919 vs. ExPASy TrEMBL
Match: A0A6J1EQC3 (uncharacterized protein LOC111436849 OS=Cucurbita moschata OX=3662 GN=LOC111436849 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 7.6e-98 Identity = 210/254 (82.68%), Postives = 225/254 (88.58%), Query Frame = 0
BLAST of Sed0008919 vs. TAIR 10
Match: AT3G05980.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). ) HSP 1 Score: 199.9 bits (507), Expect = 2.4e-51 Identity = 137/255 (53.73%), Postives = 167/255 (65.49%), Query Frame = 0
BLAST of Sed0008919 vs. TAIR 10
Match: AT5G19340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits to 906 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other Eukaryotes - 766 (source: NCBI BLink). ) HSP 1 Score: 181.8 bits (460), Expect = 6.7e-46 Identity = 130/279 (46.59%), Postives = 169/279 (60.57%), Query Frame = 0
BLAST of Sed0008919 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06 Identity = 53/139 (38.13%), Postives = 71/139 (51.08%), Query Frame = 0
BLAST of Sed0008919 vs. TAIR 10
Match: AT3G12970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56020.1); Has 2408 Blast hits to 418 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 198; Fungi - 63; Plants - 125; Viruses - 13; Other Eukaryotes - 1968 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 6.8e-06 Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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