Sed0008906 (gene) Chayote v1

Overview


Name	Sed0008906
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cyclin-dependent protein kinase inhibitor SMR6-like
Location	LG06: 41479458 .. 41479813 (+)
RNA-Seq Expression	Sed0008906
Synteny	Sed0008906

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTTTTCCCACCACCCTAAAAATGGGACTTTCAGAGAATTTCCAAGAAGATATGGGCTTGGAATCCGACCCCAAAAAATGTGTCATTTCCGGAATTCAATTACGATCTCCTTTAATGCCCATTTACACAAATCCGGTTCTCAAAGAACCCGATCACGGCCGCGGCGCTGAGGACCAACCGTCGACACCGACCGGCAACGACAGTCGAATCCGGTCCGGTTCGAAGTGCCCACCCGCCCCGAAGAAGAGAAGATCTTCGCTCAAATTCAACCACGCCGGCGACGTTAGACCGTTCTTCAAGCCTCCGGATTTAGAGGCTGTCTTTTTGTCGACATGTCGACAACACACTAATTGA

mRNA sequence

CCCTTTTTCCCACCACCCTAAAAATGGGACTTTCAGAGAATTTCCAAGAAGATATGGGCTTGGAATCCGACCCCAAAAAATGTGTCATTTCCGGAATTCAATTACGATCTCCTTTAATGCCCATTTACACAAATCCGGTTCTCAAAGAACCCGATCACGGCCGCGGCGCTGAGGACCAACCGTCGACACCGACCGGCAACGACAGTCGAATCCGGTCCGGTTCGAAGTGCCCACCCGCCCCGAAGAAGAGAAGATCTTCGCTCAAATTCAACCACGCCGGCGACGTTAGACCGTTCTTCAAGCCTCCGGATTTAGAGGCTGTCTTTTTGTCGACATGTCGACAACACACTAATTGA

Coding sequence (CDS)

ATGGGACTTTCAGAGAATTTCCAAGAAGATATGGGCTTGGAATCCGACCCCAAAAAATGTGTCATTTCCGGAATTCAATTACGATCTCCTTTAATGCCCATTTACACAAATCCGGTTCTCAAAGAACCCGATCACGGCCGCGGCGCTGAGGACCAACCGTCGACACCGACCGGCAACGACAGTCGAATCCGGTCCGGTTCGAAGTGCCCACCCGCCCCGAAGAAGAGAAGATCTTCGCTCAAATTCAACCACGCCGGCGACGTTAGACCGTTCTTCAAGCCTCCGGATTTAGAGGCTGTCTTTTTGTCGACATGTCGACAACACACTAATTGA

Protein sequence

MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFLSTCRQHTN

Homology

[Close]

BLAST of Sed0008906 vs. NCBI nr
Match: XP_022957284.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita moschata])

HSP 1 Score: 144.4 bits (363), Expect = 5.7e-31
Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 1   MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGND 60
           MG SENFQ+ MG + DP+K VI+GIQ R PL+PIYTN + KE DH    EDQP TPTG+D
Sbjct: 1   MGFSENFQDHMGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDH-CDTEDQPPTPTGDD 60

Query: 61  SRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF 102
            RIRSGSKCPPAPKKR+SS+KFNH G+VR FFKPPDLE VF
Sbjct: 61  CRIRSGSKCPPAPKKRKSSMKFNH-GNVRQFFKPPDLEVVF 99

[Close]

BLAST of Sed0008906 vs. NCBI nr
Match: KAG6601529.1 (Cyclin-dependent protein kinase inhibitor SMR8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 11  MGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCP 70
           MG + DP+K VI+GIQ R PL+PIYTNP+ KE DH    EDQP TPTG+D RIRSGSKCP
Sbjct: 1   MGFQFDPRKWVITGIQSRPPLVPIYTNPIHKELDH-CDTEDQPPTPTGDDCRIRSGSKCP 60

Query: 71  PAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF 102
           PAPKKR+SS+KFNH G+VR FFKPPDLE VF
Sbjct: 61  PAPKKRKSSMKFNH-GNVRQFFKPPDLEVVF 89

[Close]

BLAST of Sed0008906 vs. NCBI nr
Match: KAE8648709.1 (hypothetical protein Csa_009216 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-22
Identity = 64/100 (64.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 1   MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGND 60
           M  SENF++DMG E DP+K VI+GIQLR PL+      + KE  H    EDQP TPTG++
Sbjct: 1   MPFSENFRKDMGFEFDPEKWVITGIQLRPPLL----LTINKEHSHCDN-EDQPPTPTGDE 60

Query: 61  SRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV 101
            RI SGSKCPPAPKK +SSLKFNH G+VR FFKPPDLE V
Sbjct: 61  CRILSGSKCPPAPKKPKSSLKFNH-GNVRQFFKPPDLELV 94

[Close]

BLAST of Sed0008906 vs. NCBI nr
Match: XP_022726574.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Durio zibethinus])

HSP 1 Score: 107.5 bits (267), Expect = 7.7e-20
Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVL--KEPDHGRGAEDQPSTPTG 60
           MG+S   Q D GLES+ +K V++G+ LR+PL PIYTNPV   KE D  +G E + +TP G
Sbjct: 1   MGVSGKPQVDGGLESEGQKWVLAGVSLRAPLKPIYTNPVEKDKESDDEQGDESRSTTPRG 60

Query: 61  NDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFLS 104
            +++I +   CPPAP+KR+ SLKFN+ G VR FF PPDLE+VF S
Sbjct: 61  EEAKIPTILTCPPAPRKRKPSLKFNY-GSVREFFTPPDLESVFKS 104

[Close]

BLAST of Sed0008906 vs. NCBI nr
Match: KAA0034281.1 (hypothetical protein E6C27_scaffold65G002800 [Cucumis melo var. makuwa] >TYK15638.1 hypothetical protein E5676_scaffold35G001350 [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-19
Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 11  MGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCP 70
           MG E DP+K VI+GIQLR PL+      + KE +H    EDQP TPTG++ RIRSGSKCP
Sbjct: 1   MGFEFDPEKWVITGIQLRPPLL----LTINKEHNHCDN-EDQPPTPTGDECRIRSGSKCP 60

Query: 71  PAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF 102
           PAPKK +SSLKFNH+ ++R FFKPPDLE VF
Sbjct: 61  PAPKKPKSSLKFNHS-NMRQFFKPPDLEVVF 85

[Close]

BLAST of Sed0008906 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-12
Identity = 49/110 (44.55%), Postives = 65/110 (59.09%), Query Frame = 0


Query: 1   MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTN----PVL---KEPDHGRGAEDQP 60
           MG S+  Q + GLESD KK VI+GI +R+ L P+ T     P +    E D     E+  
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  STPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPP-DLEAVFL 103
           +TPT  +++I    +CPPAP+KRR +LK   +  VR FF PP DLE VFL
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKC-RSNVVREFFTPPSDLETVFL 109

[Close]

BLAST of Sed0008906 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-10
Identity = 40/99 (40.40%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 7   FQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ---PSTPTGNDSRI 66
           F       ++ KKCVI+GI L S + PI  +            ED+   P+TPT +  RI
Sbjct: 11  FDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVS-----NTEDEDLCPTTPTADSVRI 70

Query: 67  RSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL 103
            +   CPPAPKKR+ +LK ++    R FF PPDLE VF+
Sbjct: 71  PTVIPCPPAPKKRKLTLKVSYG--PREFFSPPDLETVFI 102

[Close]

BLAST of Sed0008906 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.4e-10
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 15  SDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ-PSTPTGNDSRIRSGSKCPPAP 74
           +D KK VI+GI  RSPL  I  +P +   +     +DQ P+TPT    RI     CP AP
Sbjct: 19  TDGKKWVIAGIPSRSPLKQINLSPGVTVTE--TEEQDQCPTTPTAVSVRIPRVPPCPAAP 78

Query: 75  KKRRSSLKFNHAGDVRPFFKPPDLEAVFL 103
           KKR+ SLK ++    R +F PPDLE VF+
Sbjct: 79  KKRKPSLKCSYVTVTRDYFSPPDLETVFI 105

[Close]

BLAST of Sed0008906 vs. ExPASy TrEMBL
Match: A0A6J1H1H9 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita moschata OX=3662 GN=LOC111458725 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-31
Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 1   MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGND 60
           MG SENFQ+ MG + DP+K VI+GIQ R PL+PIYTN + KE DH    EDQP TPTG+D
Sbjct: 1   MGFSENFQDHMGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDH-CDTEDQPPTPTGDD 60

Query: 61  SRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF 102
            RIRSGSKCPPAPKKR+SS+KFNH G+VR FFKPPDLE VF
Sbjct: 61  CRIRSGSKCPPAPKKRKSSMKFNH-GNVRQFFKPPDLEVVF 99

[Close]

BLAST of Sed0008906 vs. ExPASy TrEMBL
Match: A0A0A0KVI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598740 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.1e-23
Identity = 64/100 (64.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 1   MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGND 60
           M  SENF++DMG E DP+K VI+GIQLR PL+      + KE  H    EDQP TPTG++
Sbjct: 1   MPFSENFRKDMGFEFDPEKWVITGIQLRPPLL----LTINKEHSHCDN-EDQPPTPTGDE 60

Query: 61  SRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV 101
            RI SGSKCPPAPKK +SSLKFNH G+VR FFKPPDLE V
Sbjct: 61  CRILSGSKCPPAPKKPKSSLKFNH-GNVRQFFKPPDLELV 94

[Close]

BLAST of Sed0008906 vs. ExPASy TrEMBL
Match: A0A6P5XE04 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Durio zibethinus OX=66656 GN=LOC111282655 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.7e-20
Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVL--KEPDHGRGAEDQPSTPTG 60
           MG+S   Q D GLES+ +K V++G+ LR+PL PIYTNPV   KE D  +G E + +TP G
Sbjct: 1   MGVSGKPQVDGGLESEGQKWVLAGVSLRAPLKPIYTNPVEKDKESDDEQGDESRSTTPRG 60

Query: 61  NDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFLS 104
            +++I +   CPPAP+KR+ SLKFN+ G VR FF PPDLE+VF S
Sbjct: 61  EEAKIPTILTCPPAPRKRKPSLKFNY-GSVREFFTPPDLESVFKS 104

[Close]

BLAST of Sed0008906 vs. ExPASy TrEMBL
Match: A0A5A7SXV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001350 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.3e-20
Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 11  MGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCP 70
           MG E DP+K VI+GIQLR PL+      + KE +H    EDQP TPTG++ RIRSGSKCP
Sbjct: 1   MGFEFDPEKWVITGIQLRPPLL----LTINKEHNHCDN-EDQPPTPTGDECRIRSGSKCP 60

Query: 71  PAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF 102
           PAPKK +SSLKFNH+ ++R FFKPPDLE VF
Sbjct: 61  PAPKKPKSSLKFNHS-NMRQFFKPPDLEVVF 85

[Close]

BLAST of Sed0008906 vs. ExPASy TrEMBL
Match: A0A2I4EHV5 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Juglans regia OX=51240 GN=LOC108989720 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.1e-19
Identity = 57/101 (56.44%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 2   GLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDS 61
           G +   Q D GLESD KK VI+GI LR+PL PIYTNPV +      G+E+  +TPTG ++
Sbjct: 5   GKALQLQADGGLESDGKKWVIAGIPLRAPLKPIYTNPV-ETWAGSDGSEECSTTPTGEEA 64

Query: 62  RIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL 103
           RI +   CPPAP+KR+SSLK N+ G VR FF PPDLE+VF+
Sbjct: 65  RIPTRLTCPPAPRKRKSSLKCNYGG-VREFFTPPDLESVFI 103

[Close]

BLAST of Sed0008906 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 8.8e-14
Identity = 49/110 (44.55%), Postives = 65/110 (59.09%), Query Frame = 0


Query: 1   MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTN----PVL---KEPDHGRGAEDQP 60
           MG S+  Q + GLESD KK VI+GI +R+ L P+ T     P +    E D     E+  
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  STPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPP-DLEAVFL 103
           +TPT  +++I    +CPPAP+KRR +LK   +  VR FF PP DLE VFL
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKC-RSNVVREFFTPPSDLETVFL 109

[Close]

BLAST of Sed0008906 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-11
Identity = 40/99 (40.40%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 7   FQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ---PSTPTGNDSRI 66
           F       ++ KKCVI+GI L S + PI  +            ED+   P+TPT +  RI
Sbjct: 11  FDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVS-----NTEDEDLCPTTPTADSVRI 70

Query: 67  RSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL 103
            +   CPPAPKKR+ +LK ++    R FF PPDLE VF+
Sbjct: 71  PTVIPCPPAPKKRKLTLKVSYG--PREFFSPPDLETVFI 102

[Close]

BLAST of Sed0008906 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-11
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 15  SDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ-PSTPTGNDSRIRSGSKCPPAP 74
           +D KK VI+GI  RSPL  I  +P +   +     +DQ P+TPT    RI     CP AP
Sbjct: 19  TDGKKWVIAGIPSRSPLKQINLSPGVTVTE--TEEQDQCPTTPTAVSVRIPRVPPCPAAP 78

Query: 75  KKRRSSLKFNHAGDVRPFFKPPDLEAVFL 103
           KKR+ SLK ++    R +F PPDLE VF+
Sbjct: 79  KKRKPSLKCSYVTVTRDYFSPPDLETVFI 105

The following BLAST results are available for this feature:

BLAST of Sed0008906 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957284.1	5.7e-31	71.29	cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita moschata]	[more]
KAG6601529.1	1.3e-27	72.53	Cyclin-dependent protein kinase inhibitor SMR8, partial [Cucurbita argyrosperma ...	[more]
KAE8648709.1	1.3e-22	64.00	hypothetical protein Csa_009216 [Cucumis sativus]	[more]
XP_022726574.1	7.7e-20	54.29	cyclin-dependent protein kinase inhibitor SMR6-like [Durio zibethinus]	[more]
KAA0034281.1	1.3e-19	63.74	hypothetical protein E6C27_scaffold65G002800 [Cucumis melo var. makuwa] >TYK1563...	[more]

BLAST of Sed0008906 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q29Q81	1.2e-12	44.55	Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q1G3Y4	2.6e-10	40.40	Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SAD3	3.4e-10	44.94	Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Sed0008906 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1H9	2.7e-31	71.29	cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita moschata OX=366...	[more]
A0A0A0KVI5	6.1e-23	64.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598740 PE=4 SV=1	[more]
A0A6P5XE04	3.7e-20	54.29	cyclin-dependent protein kinase inhibitor SMR6-like OS=Durio zibethinus OX=66656...	[more]
A0A5A7SXV2	6.3e-20	63.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2I4EHV5	3.1e-19	56.44	cyclin-dependent protein kinase inhibitor SMR6-like OS=Juglans regia OX=51240 GN...	[more]

BLAST of Sed0008906 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40460.1	8.8e-14	44.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G60783.1	1.8e-11	40.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10690.1	2.4e-11	44.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..89
None	No IPR available	PANTHER	PTHR33142:SF48	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR15	coord: 1..104
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008906.1	Sed0008906.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus