Sed0008901 (gene) Chayote v1

Overview


Name	Sed0008901
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Thioredoxin
Location	LG11: 25975493 .. 25977857 (-)
RNA-Seq Expression	Sed0008901
Synteny	Sed0008901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGAATTCCACGATTACTCCGTGAACAAAGTCAAATGCAAGGGTAGTTTGGTAAATGCACCAAACCAAGAGAAAAGCAGGCGCATTTCTCTTCCTATATAAACCCTCTGCCCCTTCTTCTCCAAATTCATCGCTTCGTTTTCCATTACAGTCGAAATTTTTCTGCCGAACATATCTGTTTCTCTTTGATCCAATGGCTGATGAAGGGCAAGTGGTTGCGATCCACAAGATTGAAGAGTTCGATCCAATAGTCGCCCAAGGAGCTGATAAACTGGTACGGTTTTCGCTTTCCGATTGATTTGTTTTCTCATTTGTGATTTCCATGGAGTTTTTTATTCGGTCGGTATGTTTATTGAAGCGTTTTTCGTTACTAACGATTTCGATTGGGTTATTGCTGTGGGAGTTTGTTTGGTGATTTTGGTGGGGGAAATAATCGCGACCGGTTTGTTAGGGTTTTTGATGTTGATGTCTGACGTCTGATCTCTTGAGTCCTGGCTAGTTGAATTCGATTGTCTCGTTTTTTTTTTCTTTCTATTTTTACTGTTCAATTCTTTTTGTGTATTTAAATTTGATGGTGTTATTCTTGTCCCCAAGGGGTGAAAACTTGGGCTTTGGGCTTTGAGGGTATGCTCCCCTCAAGGTCTCAACTTCGAGACTCACCTGTGATAACACTCCTTCCATGTCTCCAATGCCTGGCTTAGGGACGGGTGTGGCTACCCTTGTTTCAAAAATTTGATGGTGTTATTCTGCTTTGATGTTACTTCACTGGATTTTGATGGTGTTGGTAGGGTCTTGGAGTCTTTTATGTTTCTTGGAAGTTCCTTATTCGAAACCCACTAGCAGCATGAGTGAGCTTAATTATAAATCCTTTGTTATGCGACCGGCATAGGTTCTTGTGGGACAGGTGCGGGTGCCTTAGTATGTAGTGGGTCGAGCTTAGGTGCCCCATGGAGGGTGTCCAGTGGGATGAAGCTCCGATGATCGGTAACAAAAAAGTATTACTTCACATACCAATGTTGTAGGATTAAGCTATATGGCTCGTCACAATAGTCAAAATCCACTAGGACTACAAGTGAACTAAATTATAAAATCTTTTGGGTTGGCGTAGGTGGGATGGGCGCAAGTTCCCCCTATTTTGTGGGACGGGTGCAAGTGCACTTGTTTGGAGTGGGATGCGCGTAGGTGCCCCCACTACGGGATGAGCACCAGTGCCTCCTACTCCAGTATGTTGGGATGGGTGCAGGTGTGAGGTGCCTCGGTATGGAGCGGGGATGGGAACTAGTGCCCCGTGCTCCAGTTTGTAGTAGGGCGGGCGCAATTGTCTCATTATATAGTGGAGGCGAAGTTTTGATTTCTGATTAAATATATTATTTTACTCAATATTATTAGTTTCAGCTTGACAGTCCGGATTTTGTTCCTGATGTTTCTACCACTTTATTTGATAGATTGTGGTGGACTTTACTGCTTCCTGGTGCCCACCATGCCGTTTCATTGCTCCAGTATTCGCAGATTTGGCTAAGGGCAACCCTGGTACCATTTTCCTGAAAGTAGACGTCGATGAAGTCAAAGTAATGAAACTTGGACCCTCTCAACTTTTTGCAAAATTACTAAATTATGCCCACTTTGTTGCTTTGCGATCTTTTTGGTGCAGTGGGATTGAATTGTCCCTTTTTCTAACAATGGCTTCTGTTTCTCTGCAGGAAATATCCGAGAGGTACGAGGTTACAGCGATGCCGACCTTTGTTTTTCTGAAAGGAGGGAAAGAAGTTCATAGGATTATTGGTGCTGACAAAGCTGAGCTGGGGAAGAAAGTGAAGGAGCTGAACACTGCTGCTCCTGCTGCAACTTCTACTGCTTAGGTGGTCAGCTTTGATGAGCTTTCTCCCTCTTATTATTATGTTGTATTGATGATTCTGGTTTTGAGTTTGTTCTACTTCTGGATTTCTTGACGTCCTGTCTGAGATGTTTACTTTTGTGTTAAGGATGTTTGTAAAAGATATTTGTAGAATAAGATTTGATGTTTCACTTTTGAATTCAGTGTCGTTTGGAAGTTTACAGATAACTTCTTTTGTGTGGTAAGGAGAAAGAAATGAAACAACTAAGCTCCATGGCCAATGGTCACTATTTGTTTGTTTCATCTTTTGTTACCATAAAAATTTAAAAGTTTCATTGAATTTGGCTAAGAATTCAAAAGAATAGATGAAACATGATCAAATTAGTCAAGAAAGTAGTTCCTTTTGCTTTTGATTCTCCTTTTTCTCTCAGCTGTAGAAAAGTCTTTATGCTGTTTTATGGTTGGTTGAATTTCTCATTTTTGTGTTGGCCCTCCAATTTGTGCTTTATGCCTAATCAGGTTGAATGGGAT

mRNA sequence

CACGAATTCCACGATTACTCCGTGAACAAAGTCAAATGCAAGGGTAGTTTGGTAAATGCACCAAACCAAGAGAAAAGCAGGCGCATTTCTCTTCCTATATAAACCCTCTGCCCCTTCTTCTCCAAATTCATCGCTTCGTTTTCCATTACAGTCGAAATTTTTCTGCCGAACATATCTGTTTCTCTTTGATCCAATGGCTGATGAAGGGCAAGTGGTTGCGATCCACAAGATTGAAGAGTTCGATCCAATAGTCGCCCAAGGAGCTGATAAACTGATTGTGGTGGACTTTACTGCTTCCTGGTGCCCACCATGCCGTTTCATTGCTCCAGTATTCGCAGATTTGGCTAAGGGCAACCCTGGTACCATTTTCCTGAAAGTAGACGTCGATGAAGTCAAAGAAATATCCGAGAGGTACGAGGTTACAGCGATGCCGACCTTTGTTTTTCTGAAAGGAGGGAAAGAAGTTCATAGGATTATTGGTGCTGACAAAGCTGAGCTGGGGAAGAAAGTGAAGGAGCTGAACACTGCTGCTCCTGCTGCAACTTCTACTGCTTAGGTGGTCAGCTTTGATGAGCTTTCTCCCTCTTATTATTATGTTGTATTGATGATTCTGGTTTTGAGTTTGTTCTACTTCTGGATTTCTTGACGTCCTGTCTGAGATGTTTACTTTTGTGTTAAGGATGTTTGTAAAAGATATTTGTAGAATAAGATTTGATGTTTCACTTTTGAATTCAGTGTCGTTTGGAAGTTTACAGATAACTTCTTTTGTGTGGTAAGGAGAAAGAAATGAAACAACTAAGCTCCATGGCCAATGGTCACTATTTGTTTGTTTCATCTTTTGTTACCATAAAAATTTAAAAGTTTCATTGAATTTGGCTAAGAATTCAAAAGAATAGATGAAACATGATCAAATTAGTCAAGAAAGTAGTTCCTTTTGCTTTTGATTCTCCTTTTTCTCTCAGCTGTAGAAAAGTCTTTATGCTGTTTTATGGTTGGTTGAATTTCTCATTTTTGTGTTGGCCCTCCAATTTGTGCTTTATGCCTAATCAGGTTGAATGGGAT

Coding sequence (CDS)

ATGCACCAAACCAAGAGAAAAGCAGGCGCATTTCTCTTCCTATATAAACCCTCTGCCCCTTCTTCTCCAAATTCATCGCTTCGTTTTCCATTACAGTCGAAATTTTTCTGCCGAACATATCTGTTTCTCTTTGATCCAATGGCTGATGAAGGGCAAGTGGTTGCGATCCACAAGATTGAAGAGTTCGATCCAATAGTCGCCCAAGGAGCTGATAAACTGATTGTGGTGGACTTTACTGCTTCCTGGTGCCCACCATGCCGTTTCATTGCTCCAGTATTCGCAGATTTGGCTAAGGGCAACCCTGGTACCATTTTCCTGAAAGTAGACGTCGATGAAGTCAAAGAAATATCCGAGAGGTACGAGGTTACAGCGATGCCGACCTTTGTTTTTCTGAAAGGAGGGAAAGAAGTTCATAGGATTATTGGTGCTGACAAAGCTGAGCTGGGGAAGAAAGTGAAGGAGCTGAACACTGCTGCTCCTGCTGCAACTTCTACTGCTTAG

Protein sequence

MHQTKRKAGAFLFLYKPSAPSSPNSSLRFPLQSKFFCRTYLFLFDPMADEGQVVAIHKIEEFDPIVAQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTIFLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAATSTA

Homology

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BLAST of Sed0008901 vs. NCBI nr
Match: XP_022997319.1 (thioredoxin H5-like [Cucurbita maxima])

HSP 1 Score: 186.0 bits (471), Expect = 2.6e-43
Identity = 95/144 (65.97%), Postives = 116/144 (80.56%), Query Frame = 0


Query: 25  SSLRFPLQSKFFCRTYLFLFDPMADEGQVVAIHKIEEFDPIVAQG--ADKLIVVDFTASW 84
           SSL F +Q +    T  FLF+PMA EGQ + + K++EFD +V QG  A KLIVVDFTASW
Sbjct: 5   SSLHFQIQGRLLQDTD-FLFEPMAAEGQAIVVRKVDEFDALVKQGSEAGKLIVVDFTASW 64

Query: 85  CPPCRFIAPVFADLAKGNPGTIFLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIG 144
           CPPCRFIAPVFA++AK +   +FLKVDVD++KEI++++EVTAMPTFVFLKGG EV+RI+G
Sbjct: 65  CPPCRFIAPVFAEMAKAHSNVVFLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVYRIVG 124

Query: 145 ADKAELGKKVKELNTAAPAATSTA 167
           ADK ELGKKV EL   APAATS+A
Sbjct: 125 ADKVELGKKVLEL--GAPAATSSA 145

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BLAST of Sed0008901 vs. NCBI nr
Match: KAG7029409.1 (Thioredoxin H5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 185.7 bits (470), Expect = 3.3e-43
Identity = 95/144 (65.97%), Postives = 116/144 (80.56%), Query Frame = 0


Query: 25  SSLRFPLQSKFFCRTYLFLFDPMADEGQVVAIHKIEEFDPIVAQG--ADKLIVVDFTASW 84
           S L F +Q +   +   FLF+PMA EGQV+ + K++EFD +V QG  A KLIVVDFTASW
Sbjct: 5   SLLHFQIQGRLL-QDPDFLFEPMAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASW 64

Query: 85  CPPCRFIAPVFADLAKGNPGTIFLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIG 144
           CPPCRFIAPVFA++AK +   +FLKVDVD++KEI++++EVTAMPTFVFLKGG EVHRI+G
Sbjct: 65  CPPCRFIAPVFAEMAKAHVNVVFLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVG 124

Query: 145 ADKAELGKKVKELNTAAPAATSTA 167
           ADK ELGKKV EL   APAATS+A
Sbjct: 125 ADKVELGKKVLEL--GAPAATSSA 145

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BLAST of Sed0008901 vs. NCBI nr
Match: XP_022962605.1 (thioredoxin H5-like [Cucurbita moschata] >KAG6598472.1 Thioredoxin H5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-40
Identity = 88/122 (72.13%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIVAQG--ADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA EGQV+ + K+EEFD +V QG  A KLIVVDFTASWCPPCRFIAPVFA++AK +   +
Sbjct: 1   MAAEGQVIVVRKVEEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAATS 166
           FLKVDVD++KEI++++EVTAMPTFVFLKGG EVHRI+GADK ELGKKV EL   APAATS
Sbjct: 61  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLEL--GAPAATS 120

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BLAST of Sed0008901 vs. NCBI nr
Match: XP_023545550.1 (thioredoxin H5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-40
Identity = 88/122 (72.13%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIVAQG--ADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA EGQV+ + K+EEFD +V QG  A KLIVVDFTASWCPPCRFIAPVFA++AK +   +
Sbjct: 1   MAAEGQVIVVRKVEEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAATS 166
           FLKVDVDE+KEI+++++VTAMPTFVFLKGG EVHRI+GADK ELGKKV EL   APAATS
Sbjct: 61  FLKVDVDELKEIAQKFDVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLEL--GAPAATS 120

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BLAST of Sed0008901 vs. NCBI nr
Match: XP_038884374.1 (thioredoxin H-type-like [Benincasa hispida])

HSP 1 Score: 172.2 bits (435), Expect = 3.8e-39
Identity = 87/123 (70.73%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIVAQG--ADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA+EGQV+ IHK+EEFD +V  G  A KLIVVDFTASWCPPCRFIAP+FA+LAK N   I
Sbjct: 1   MAEEGQVIGIHKVEEFDTLVKLGNEAGKLIVVDFTASWCPPCRFIAPIFAELAKANVNVI 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKEL-NTAAPAAT 166
           FLKVDVDEVKEI+E+Y V AMPTFVFLK   E+HRI+GADK +LG KV EL  +AA +AT
Sbjct: 61  FLKVDVDEVKEIAEKYGVNAMPTFVFLKDENEIHRIVGADKVQLGNKVAELARSAAASAT 120

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BLAST of Sed0008901 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-30
Identity = 66/119 (55.46%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 48  ADEGQVVAIHKIEEFDPIVAQGAD--KLIVVDFTASWCPPCRFIAPVFADLAKGNPGTIF 107
           ++EGQV   HK+EE++    +G +  KL+VVDFTASWC PCRFIAP+ AD+AK  P  IF
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIF 68

Query: 108 LKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAATS 165
           LKVDVDE+K +S  + V AMPTFVF+K GKEV R++GA K EL + +  +  AAPA  +
Sbjct: 69  LKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTI--VKHAAPATVT 125

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BLAST of Sed0008901 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.9e-29
Identity = 63/121 (52.07%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 48  ADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTIF 107
           A+EG V+A H  +EFD  +  A+ A K++++DFTASWC PCRFIAPVFA+ AK  PG +F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 108 LKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAATST 167
           LKVDVDE+KE++E+Y V AMPTF+F+K G E  +++GA K +L   + + +  A AA+++
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVK-HVGATAASAS 122

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BLAST of Sed0008901 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.9e-29
Identity = 63/121 (52.07%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 48  ADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTIF 107
           A+EG V+A H  +EFD  +  A+ A K++++DFTASWC PCRFIAPVFA+ AK  PG +F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 108 LKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAATST 167
           LKVDVDE+KE++E+Y V AMPTF+F+K G E  +++GA K +L   + + +  A AA+++
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVK-HVGATAASAS 122

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BLAST of Sed0008901 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.7e-27
Identity = 56/108 (51.85%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA EG+V+A H +E ++  V  A  + KLIV+DFTASWCPPCRFIAPVFA++AK     +
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKV 153
           F K+DVDE++ +++ ++V AMPTFVF+K G  + R++GA K E+ +K+
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108

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BLAST of Sed0008901 vs. ExPASy Swiss-Prot
Match: Q42403 (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-26
Identity = 58/118 (49.15%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA EG+V+A H +E++   +  A  + KLIV+DFTA+WCPPCRFIAPVFADLAK +   +
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAA 163
           F KVDVDE+  ++E ++V AMPTF+F+K G+    ++GA K E+   +++  T   AA
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

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BLAST of Sed0008901 vs. ExPASy TrEMBL
Match: A0A6J1KB35 (thioredoxin H5-like OS=Cucurbita maxima OX=3661 GN=LOC111492267 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43
Identity = 95/144 (65.97%), Postives = 116/144 (80.56%), Query Frame = 0


Query: 25  SSLRFPLQSKFFCRTYLFLFDPMADEGQVVAIHKIEEFDPIVAQG--ADKLIVVDFTASW 84
           SSL F +Q +    T  FLF+PMA EGQ + + K++EFD +V QG  A KLIVVDFTASW
Sbjct: 5   SSLHFQIQGRLLQDTD-FLFEPMAAEGQAIVVRKVDEFDALVKQGSEAGKLIVVDFTASW 64

Query: 85  CPPCRFIAPVFADLAKGNPGTIFLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIG 144
           CPPCRFIAPVFA++AK +   +FLKVDVD++KEI++++EVTAMPTFVFLKGG EV+RI+G
Sbjct: 65  CPPCRFIAPVFAEMAKAHSNVVFLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVYRIVG 124

Query: 145 ADKAELGKKVKELNTAAPAATSTA 167
           ADK ELGKKV EL   APAATS+A
Sbjct: 125 ADKVELGKKVLEL--GAPAATSSA 145

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BLAST of Sed0008901 vs. ExPASy TrEMBL
Match: A0A6J1HFK3 (thioredoxin H5-like OS=Cucurbita moschata OX=3662 GN=LOC111463007 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.8e-41
Identity = 88/122 (72.13%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIVAQG--ADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA EGQV+ + K+EEFD +V QG  A KLIVVDFTASWCPPCRFIAPVFA++AK +   +
Sbjct: 1   MAAEGQVIVVRKVEEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAATS 166
           FLKVDVD++KEI++++EVTAMPTFVFLKGG EVHRI+GADK ELGKKV EL   APAATS
Sbjct: 61  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLEL--GAPAATS 120

[Close]

BLAST of Sed0008901 vs. ExPASy TrEMBL
Match: A0A6J1CST8 (thioredoxin H-type 1-like OS=Momordica charantia OX=3673 GN=LOC111013893 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.6e-37
Identity = 83/124 (66.94%), Postives = 102/124 (82.26%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIVAQGAD--KLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA+EGQV+ +H +E FD ++ +G +  KLIVVDFTASWCPPCRFIAP+FA+LAK + G I
Sbjct: 1   MAEEGQVIGVHNVEAFDDLLKKGTESGKLIVVDFTASWCPPCRFIAPIFAELAKAHIGVI 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEV--HRIIGADKAELGKKVKELNTAAPAA 166
           FLKVDVDEVKE+SE++EVTAMPTFVFLK G EV   RI+GADK ELGK+V  L  +APAA
Sbjct: 61  FLKVDVDEVKEVSEKFEVTAMPTFVFLKEGAEVKNSRIVGADKVELGKRV--LALSAPAA 120

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BLAST of Sed0008901 vs. ExPASy TrEMBL
Match: Q8H9E2 (Thioredoxin h OS=Cucurbita maxima OX=3661 GN=LOC111496364 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.1e-35
Identity = 81/121 (66.94%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA EGQV+ +   EEFD I+   + + +LIV+DFTASWCPPCRFIAPVFA+LAK +    
Sbjct: 1   MAVEGQVIPLRDAEEFDAIIDKEKESGRLIVIDFTASWCPPCRFIAPVFAELAKAHVHVT 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAATS 166
           FLKVDVD VKEI++R+EVTAMPTFVFLKGG EVHRI+GADK ELG KV EL +AAPA  +
Sbjct: 61  FLKVDVDNVKEIAKRFEVTAMPTFVFLKGGNEVHRIVGADKVELGVKVLEL-SAAPATCA 120

[Close]

BLAST of Sed0008901 vs. ExPASy TrEMBL
Match: A0A6J1GID1 (thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111454194 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.8e-35
Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA EGQV+ +   +EFD I+   + + KLIV+DFTASWCPPCR IAPVFA+LAK +    
Sbjct: 1   MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVT 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAATS 165
           FLKVDVD VKEI+ER+EV AMPTFVFLKGGKEVHRI+GADK ELG KV EL +AAPA ++
Sbjct: 61  FLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADKVELGVKVLEL-SAAPATSA 119

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BLAST of Sed0008901 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-28
Identity = 56/108 (51.85%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA EG+V+A H +E ++  V  A  + KLIV+DFTASWCPPCRFIAPVFA++AK     +
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKV 153
           F K+DVDE++ +++ ++V AMPTFVF+K G  + R++GA K E+ +K+
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108

[Close]

BLAST of Sed0008901 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 58/118 (49.15%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 47  MADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTI 106
           MA EG+V+A H +E++   +  A  + KLIV+DFTA+WCPPCRFIAPVFADLAK +   +
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 107 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKELNTAAPAA 163
           F KVDVDE+  ++E ++V AMPTF+F+K G+    ++GA K E+   +++  T   AA
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

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BLAST of Sed0008901 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-26
Identity = 55/103 (53.40%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 48  ADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTIF 107
           ++EGQV+A H +E ++  +  A  +  L+VVDFTASWC PCRFIAP FADLAK  P  +F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 108 LKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAEL 149
           LKVD DE+K ++  + + AMPTF+FLK GK + +++GA K EL
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDEL 105

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BLAST of Sed0008901 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 7.5e-25
Identity = 54/108 (50.00%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 48  ADEGQVVAIHKIEEFDPIV--AQGADKLIVVDFTASWCPPCRFIAPVFADLAKG-NPGTI 107
           A+EGQV+  H  + +   +  A+ ++KLIV+DFTASWCPPCR IAP+F DLAK      I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 108 FLKVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKV 153
           F KVDVDE++ +++ + V AMPTFVF+K G+ V +++GA+K +L  K+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKI 110

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BLAST of Sed0008901 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 101.3 bits (251), Expect = 7.7e-22
Identity = 39/108 (36.11%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 49  DEGQVVAIHKIEEFD--PIVAQGADKLIVVDFTASWCPPCRFIAPVFADLAKGNPGTIFL 108
           ++G+V++IH   E +     A+ A +L+++ FTA+WC PCR+++P++++LA  +   +FL
Sbjct: 268 NDGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFL 327

Query: 109 KVDVDEVKEISERYEVTAMPTFVFLKGGKEVHRIIGADKAELGKKVKE 155
           KVD+D+  +++  + ++++PTF F++ GKEV +++GADK  L +K+ +
Sbjct: 328 KVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQ 375

The following BLAST results are available for this feature:

BLAST of Sed0008901 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997319.1	2.6e-43	65.97	thioredoxin H5-like [Cucurbita maxima]	[more]
KAG7029409.1	3.3e-43	65.97	Thioredoxin H5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022962605.1	1.2e-40	72.13	thioredoxin H5-like [Cucurbita moschata] >KAG6598472.1 Thioredoxin H5, partial [...	[more]
XP_023545550.1	1.2e-40	72.13	thioredoxin H5-like [Cucurbita pepo subsp. pepo]	[more]
XP_038884374.1	3.8e-39	70.73	thioredoxin H-type-like [Benincasa hispida]	[more]

BLAST of Sed0008901 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29449	3.4e-30	55.46	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q0D840	2.9e-29	52.07	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]
A2YIW7	2.9e-29	52.07	Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1	[more]
Q39241	2.7e-27	51.85	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]
Q42403	1.7e-26	49.15	Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1	[more]

BLAST of Sed0008901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KB35	1.2e-43	65.97	thioredoxin H5-like OS=Cucurbita maxima OX=3661 GN=LOC111492267 PE=4 SV=1	[more]
A0A6J1HFK3	5.8e-41	72.13	thioredoxin H5-like OS=Cucurbita moschata OX=3662 GN=LOC111463007 PE=4 SV=1	[more]
A0A6J1CST8	6.6e-37	66.94	thioredoxin H-type 1-like OS=Momordica charantia OX=3673 GN=LOC111013893 PE=4 SV...	[more]
Q8H9E2	2.1e-35	66.94	Thioredoxin h OS=Cucurbita maxima OX=3661 GN=LOC111496364 PE=2 SV=1	[more]
A0A6J1GID1	2.8e-35	67.50	thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111454194 PE=4 SV=1	[more]

BLAST of Sed0008901 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45145.1	1.9e-28	51.85	thioredoxin H-type 5	[more]
AT5G42980.1	1.2e-27	49.15	thioredoxin 3	[more]
AT3G51030.1	1.4e-26	53.40	thioredoxin H-type 1	[more]
AT1G19730.1	7.5e-25	50.00	Thioredoxin superfamily protein	[more]
AT3G17880.1	7.7e-22	36.11	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 121..132 score: 37.04 coord: 82..91 score: 58.56 coord: 74..82 score: 53.21
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 45..162 e-value: 6.8E-37 score: 128.1
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 47..158
None	No IPR available	PANTHER	PTHR10438:SF399	THIOREDOXIN	coord: 47..158
None	No IPR available	CDD	cd02947	TRX_family	coord: 60..153 e-value: 2.26559E-35 score: 116.889
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 54..153 e-value: 6.1E-25 score: 87.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 16..157 score: 13.401941
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 75..93
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 50..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008901.1	Sed0008901.1	mRNA