Homology
BLAST of Sed0008900 vs. NCBI nr
Match:
XP_023543683.1 (pentatricopeptide repeat-containing protein At2g04860 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1196.8 bits (3095), Expect = 0.0e+00
Identity = 590/699 (84.41%), Postives = 641/699 (91.70%), Query Frame = 0
Query: 3 LTNLSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSS- 62
L +LS ++ H AFKSY+E KISTPPLL+FRQLLRYR+KP DSTFSLLIKAFVVS SSSS
Sbjct: 10 LASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRYRVKPNDSTFSLLIKAFVVSSSSSSF 69
Query: 63 APS----YAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDL 122
APS AK EANQLQ HFIKWGFDQFLYVSTAFLDLYSKLG VKA+RRLFDDIPEKD+
Sbjct: 70 APSSCSENAKVEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDV 129
Query: 123 VSWNALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHAL 182
VSWNAL++GYSR+G+ DAFE+FVEMRRRGF PCQRT+V L+PSCG Q LFVQGKC+HAL
Sbjct: 130 VSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHAL 189
Query: 183 SIKAGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEA 242
+KAGLDLDSQVKN L MYGKCADLEGVELLFGE IEK+VVSWNT+IGAFGQNGFFVEA
Sbjct: 190 GVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEA 249
Query: 243 MFVFKRMLEECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGK 302
M VFK+MLE ++ NSVTMVSILSANA+P SIHCYATKTGL+E+VSVV SL+CSYV+CG
Sbjct: 250 MLVFKQMLEGSINTNSVTMVSILSANANPRSIHCYATKTGLMENVSVVISLICSYVKCGC 309
Query: 303 VLLAELVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQG 362
+ +AEL+YMS+ +K+LV+LTAI+SGYAEK DMGSVVKLYS +QHL+MKLDAVAMVGIIQG
Sbjct: 310 IQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQG 369
Query: 363 ITSFEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSW 422
IT +H GIGLAFHGYG+KSGL+IDCLVANGFISMYSKFDDIDAV +LFQEM EK LSSW
Sbjct: 370 ITYPDHSGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDDIDAVFTLFQEMHEKTLSSW 429
Query: 423 NSVISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILR 482
NSVIS AQAGRSI+AMALF QMKLSGYGPDSITLASLLSACCQNGNLHFGE LH YILR
Sbjct: 430 NSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEILHSYILR 489
Query: 483 NNVDLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILC 542
NN+DLEGFVGTALIDMY KCGRMDFAE VFKSMKEPCLASWNS+ISGYGLFGFDNHA LC
Sbjct: 490 NNLDLEGFVGTALIDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFDNHAFLC 549
Query: 543 YTKMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLG 602
YT MMEKGIKPNKITFSGILAACTHGGLVEEGR YF++MK+E GIVPESQHCASMVGLLG
Sbjct: 550 YTTMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLG 609
Query: 603 RAGFFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVL 662
RAG FEEAI F+KNME+NPDSAVWGALLS+CCIHQEVKLGE VAKKLLFS+CRNGGFFVL
Sbjct: 610 RAGLFEEAILFIKNMEVNPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVL 669
Query: 663 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 697
MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS
Sbjct: 670 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 708
BLAST of Sed0008900 vs. NCBI nr
Match:
XP_022950030.1 (pentatricopeptide repeat-containing protein At2g04860 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1194.5 bits (3089), Expect = 0.0e+00
Identity = 588/699 (84.12%), Postives = 643/699 (91.99%), Query Frame = 0
Query: 3 LTNLSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSS- 62
L +LSL++ H AFKSY+E KISTPPLL+FRQLLR R+KP DSTFSLLIKAFVVS SSSS
Sbjct: 10 LASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSF 69
Query: 63 AP----SYAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDL 122
AP AK+EANQLQ HFIKWGFDQFLYVSTAFLDLYSKLG VKA+RRLFDDIPEKD+
Sbjct: 70 APLSCSENAKAEANQLQIHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDV 129
Query: 123 VSWNALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHAL 182
VSWNAL++GYSR+G+ DAFE+FVEMRRRGF PCQRT+V L+PSCG Q LF QGKC+HAL
Sbjct: 130 VSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFAQGKCIHAL 189
Query: 183 SIKAGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEA 242
+KAGLDLDSQVKN L MYGKCADLEGVELLFGE IEK+VVSWNT+IGAFGQNGFFVEA
Sbjct: 190 GVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEA 249
Query: 243 MFVFKRMLEECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGK 302
M VFK+MLEE +D NSVTMVSILSANA+P SIHCYATKTGLVE+VSVVTSL+CSYVRCG
Sbjct: 250 MLVFKQMLEERIDTNSVTMVSILSANANPRSIHCYATKTGLVENVSVVTSLICSYVRCGC 309
Query: 303 VLLAELVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQG 362
+ +AEL+YMS+ +K+LV+LTAI+SGYAEK DMGSVVKLYS +QHL+MKLDAVAMVGIIQG
Sbjct: 310 IQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQG 369
Query: 363 ITSFEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSW 422
IT +H GIGLAFHGYG+KSGL+IDCLVANGFISMYS+FDDIDAV SLFQEM EK LSSW
Sbjct: 370 ITYPDHSGIGLAFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMREKTLSSW 429
Query: 423 NSVISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILR 482
NSVIS AQAGRSI+AMALF QMKLSGYGPDSITLASLLSACCQNGNLHFGE +H YILR
Sbjct: 430 NSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEIIHSYILR 489
Query: 483 NNVDLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILC 542
NN+DLEGFVGTALIDMY KCGRMDFAE+VFKSMKEPCLASWNS+ISGYGLFGF+NHA LC
Sbjct: 490 NNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSLISGYGLFGFNNHAFLC 549
Query: 543 YTKMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLG 602
YTKM+EKGIKPNKITFSGILAACTHGGLVEEGR YF++MK+E GIVPESQHCASMVGLLG
Sbjct: 550 YTKMLEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLG 609
Query: 603 RAGFFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVL 662
RAG FEEAI F+KNME+NPDSAVWGALL++CCIHQEVKLGE VAK+LLFS+ RNGGFFVL
Sbjct: 610 RAGLFEEAILFIKNMEVNPDSAVWGALLNACCIHQEVKLGESVAKRLLFSNSRNGGFFVL 669
Query: 663 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 697
MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS
Sbjct: 670 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 708
BLAST of Sed0008900 vs. NCBI nr
Match:
XP_022977696.1 (pentatricopeptide repeat-containing protein At2g04860 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 586/699 (83.83%), Postives = 642/699 (91.85%), Query Frame = 0
Query: 3 LTNLSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSS- 62
L +LSL++ H AFKSY+E KISTPPLL+FRQLLR R+KP DSTFSLLIKAFVVS SSSS
Sbjct: 10 LASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSF 69
Query: 63 APS----YAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDL 122
APS A++EANQLQ HFIKWGFDQFLYVSTAFLDLYSKLG VKA+RRLFDDIPEKD+
Sbjct: 70 APSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDV 129
Query: 123 VSWNALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHAL 182
VSWNAL++GYSR+GF D FE+FVEMRRRGF PCQRT+V L+PSCG Q LFVQGKC+HAL
Sbjct: 130 VSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHAL 189
Query: 183 SIKAGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEA 242
+KAGLDLDSQVKN L MYGKCADLEGVELLFGE IEK+VVSWNT+IGAFGQNGFFVEA
Sbjct: 190 GVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEA 249
Query: 243 MFVFKRMLEECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGK 302
M VFK+MLEE ++ +SVTMVSILSANA+P SIHCYATKTGL+E+VSVVTSL+CSYV+CG
Sbjct: 250 MLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSLICSYVKCGC 309
Query: 303 VLLAELVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQG 362
+ +AE +YMS+ +K+LV+LTAI+SGYAEK DMG+VVKLYS +QHL+MKLDAVAMVGIIQG
Sbjct: 310 IHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGIIQG 369
Query: 363 ITSFEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSW 422
IT +H GIGL+FHGYG+KSGL+IDCLVANGFISMYS+FDDIDAV SLFQEM EK LSSW
Sbjct: 370 ITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLSSW 429
Query: 423 NSVISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILR 482
NSVIS AQAGRSI+AMALF QMKLSGYGPDSITLASLLSACCQNGNLHFGE LH YILR
Sbjct: 430 NSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEILHSYILR 489
Query: 483 NNVDLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILC 542
NN+DLEGFVGTALIDMY KCGRMDFAE+VFKSMKEPCLASWNSMISGYGLFGFDNH LC
Sbjct: 490 NNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVFLC 549
Query: 543 YTKMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLG 602
YTKMMEKGIKPNKITFSGILAACTHGGLVEEGR YF++MK+E GIVPESQHCASMVGLLG
Sbjct: 550 YTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLG 609
Query: 603 RAGFFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVL 662
RAG FEEAI F+KNME+NPDSAVWGA LS+CCIHQEVKLGE VAKKLLFS+CRNGGFFVL
Sbjct: 610 RAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVL 669
Query: 663 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 697
MSNLYAASGRWNDVA+VRKMMREMGEDGCSGVSLMEWIS
Sbjct: 670 MSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 708
BLAST of Sed0008900 vs. NCBI nr
Match:
KAG6603840.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034021.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1192.6 bits (3084), Expect = 0.0e+00
Identity = 587/699 (83.98%), Postives = 643/699 (91.99%), Query Frame = 0
Query: 3 LTNLSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSS- 62
L +LS ++ H AFKSY+E KISTPPLL+FRQLLR R+KP DSTFSLLIKAFVVS SSSS
Sbjct: 10 LASLSHSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSF 69
Query: 63 AP----SYAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDL 122
AP AK+EANQLQ HFIKWGFD+FLYVSTAFLDLYSKLG VKA+RRLFDDIPEKD+
Sbjct: 70 APLSCSENAKAEANQLQIHFIKWGFDRFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDV 129
Query: 123 VSWNALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHAL 182
VSWNAL++GYSR+G+ DAFE+FVEMRRRGF PCQRT+V L+PSCG Q LFVQGKC+HAL
Sbjct: 130 VSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHAL 189
Query: 183 SIKAGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEA 242
+KAGLDLDSQVKN L MYGKCADLEGVELLFGE IEK+VVSWNT+IGAFGQNGFFVEA
Sbjct: 190 GVKAGLDLDSQVKNTLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEA 249
Query: 243 MFVFKRMLEECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGK 302
M VFK+MLEE +D NSVTMVSILSANA+P SIHCYATKTGLVE+VSVVTSL+CSYVRCG
Sbjct: 250 MLVFKQMLEERIDTNSVTMVSILSANANPRSIHCYATKTGLVENVSVVTSLICSYVRCGC 309
Query: 303 VLLAELVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQG 362
+ +AEL+YMS+ +K+LV+LTAI+SGYAEK DMGSVVKLYS +QHL+MKLDAVAMVGIIQG
Sbjct: 310 IQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQG 369
Query: 363 ITSFEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSW 422
IT +H GIGLAFHGYG+KSGL+IDCLVANGFISMYS+FDDIDAV SLFQEM EK LSSW
Sbjct: 370 ITYPDHSGIGLAFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMREKTLSSW 429
Query: 423 NSVISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILR 482
NSVIS AQAGRSI+AMALF QMKLSGYGPDSITLASLLSACCQNGNLHFGE +H YILR
Sbjct: 430 NSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEIIHSYILR 489
Query: 483 NNVDLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILC 542
NN+DLEGFVGTALIDMY KCGRMDFAE+VFKSMKEPCLASWNS+ISGYGLFGF+NHA LC
Sbjct: 490 NNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSLISGYGLFGFNNHAFLC 549
Query: 543 YTKMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLG 602
YTKM+EKGIKPNKITFSGILAACTHGGLVEEGR YF++MK+E GIVPESQHCASMVGLLG
Sbjct: 550 YTKMLEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLG 609
Query: 603 RAGFFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVL 662
RAG FEEAI F+KNME+NPDSAVWGALL++CCIHQEVKLGE VAK+LLFS+ RNGGFFVL
Sbjct: 610 RAGLFEEAILFIKNMEVNPDSAVWGALLNACCIHQEVKLGESVAKRLLFSNSRNGGFFVL 669
Query: 663 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 697
MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS
Sbjct: 670 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 708
BLAST of Sed0008900 vs. NCBI nr
Match:
XP_038882792.1 (pentatricopeptide repeat-containing protein At2g04860 [Benincasa hispida])
HSP 1 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 578/699 (82.69%), Postives = 634/699 (90.70%), Query Frame = 0
Query: 3 LTNLSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSS- 62
L LSL++ H AFKSY+E K TPPLL+FRQLLRY IKP DSTFSLLIKAFVVS SSSS
Sbjct: 10 LATLSLSTFHSAFKSYVEGKNFTPPLLLFRQLLRYPIKPNDSTFSLLIKAFVVSSSSSSF 69
Query: 63 APS----YAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDL 122
APS AK+EANQLQ HFIKWGFDQFLYVSTAFLDLYSKLG VKA++ LFD+ PEKD+
Sbjct: 70 APSSCSENAKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQHLFDEFPEKDV 129
Query: 123 VSWNALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHAL 182
VSWNAL++GYSR+G+ DAF++FVEMRRRGF PCQRT+V L+PSCG Q+LFVQGKC+HAL
Sbjct: 130 VSWNALISGYSRSGYSHDAFKLFVEMRRRGFDPCQRTLVSLIPSCGTQQLFVQGKCIHAL 189
Query: 183 SIKAGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEA 242
+KAGLDLDSQVKNVL MYGKCADLE VELLFGETIEK+VVSWNT+IGAF QNGFF+EA
Sbjct: 190 GVKAGLDLDSQVKNVLASMYGKCADLEAVELLFGETIEKNVVSWNTMIGAFDQNGFFLEA 249
Query: 243 MFVFKRMLEECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGK 302
M VFK+MLEE V+ANSVTMVSILSANA+P IHCYATKTGLVE++SVV SLVCSYV CG
Sbjct: 250 MLVFKQMLEERVNANSVTMVSILSANANPGCIHCYATKTGLVENLSVVVSLVCSYVSCGC 309
Query: 303 VLLAELVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQG 362
+ +AEL+YMS+ +K+LV+LTAI+S YAEK DMGSVVKLYS MQHLDMKLDAVAMVGIIQG
Sbjct: 310 IQIAELIYMSKLQKNLVALTAIISSYAEKGDMGSVVKLYSRMQHLDMKLDAVAMVGIIQG 369
Query: 363 ITSFEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSW 422
IT +H GIGLAFHGYG+KSGL+IDCLVANGFISMYSKFD+IDAV SLF EM K LSSW
Sbjct: 370 ITYPDHFGIGLAFHGYGLKSGLIIDCLVANGFISMYSKFDNIDAVFSLFLEMHRKTLSSW 429
Query: 423 NSVISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILR 482
NSVIS AQAGRSI+AMALF QM LSGYGPDSITLASLLSACCQNGNLHFGE LHCYILR
Sbjct: 430 NSVISSCAQAGRSIDAMALFSQMMLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILR 489
Query: 483 NNVDLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILC 542
NN+DLE FVGTALIDMY KCGR+D AE+VFKSMK+PCLASWNS+ISGYGLFGFDNHA+ C
Sbjct: 490 NNLDLENFVGTALIDMYVKCGRIDLAEKVFKSMKDPCLASWNSLISGYGLFGFDNHALRC 549
Query: 543 YTKMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLG 602
YTKMMEKGIKPNKITFSG+LAACTHGGLVEEGR YFK+MK+EFGIVPESQHCASMVGLLG
Sbjct: 550 YTKMMEKGIKPNKITFSGLLAACTHGGLVEEGRTYFKIMKKEFGIVPESQHCASMVGLLG 609
Query: 603 RAGFFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVL 662
RAG FEEAI F+KNME+NPDSAVWGALLS+CCIHQEVKLGE VAKKL FS+CRNGGFFVL
Sbjct: 610 RAGLFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLFFSNCRNGGFFVL 669
Query: 663 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 697
MSNLYAASGRWNDVA+VRKMMREMG+DG SGVSLMEWIS
Sbjct: 670 MSNLYAASGRWNDVAKVRKMMREMGDDGYSGVSLMEWIS 708
BLAST of Sed0008900 vs. ExPASy Swiss-Prot
Match:
Q9SJ73 (Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E74 PE=2 SV=3)
HSP 1 Score: 699.5 bits (1804), Expect = 3.8e-200
Identity = 351/684 (51.32%), Postives = 472/684 (69.01%), Query Frame = 0
Query: 8 LTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSSAPSYAK 67
L+ H KS I +IS+ P+ IFR LLR + P T S+ ++A S +S K
Sbjct: 13 LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNS------FK 72
Query: 68 SEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVNGY 127
+ Q+Q H K G D+F+YV T+ L+LY K GCV +++ LFD++PE+D V WNAL+ GY
Sbjct: 73 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY 132
Query: 128 SRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDLDS 187
SRNG+ DA+++F+ M ++GF P T+V L+P CG QG+ VH ++ K+GL+LDS
Sbjct: 133 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 192
Query: 188 QVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRMLEE 247
QVKN L+ Y KCA+L E+LF E +KS VSWNT+IGA+ Q+G EA+ VFK M E+
Sbjct: 193 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 252
Query: 248 CVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAELVYMS 307
V+ + VT++++LSA+ + +HC K G+V D+SVVTSLVC+Y RCG ++ AE +Y S
Sbjct: 253 NVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS 312
Query: 308 QCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFEHLGIG 367
+ +V LT+I+S YAEK DM V +S+ + L MK+DAVA+VGI+ G H+ IG
Sbjct: 313 AKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 372
Query: 368 LAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVISGYAQA 427
++ HGY +KSGL LV NG I+MYSKFDD++ VL LF+++ E PL SWNSVISG Q+
Sbjct: 373 MSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQS 432
Query: 428 GRSIEAMALFCQMKLS-GYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDLEGFV 487
GR+ A +F QM L+ G PD+IT+ASLL+ C Q L+ G++LH Y LRNN + E FV
Sbjct: 433 GRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFV 492
Query: 488 GTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMMEKGI 547
TALIDMYAKCG AE VFKS+K PC A+WNSMISGY L G + A+ CY +M EKG+
Sbjct: 493 CTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGL 552
Query: 548 KPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFFEEAI 607
KP++ITF G+L+AC HGG V+EG+ F+ M +EFGI P QH A MVGLLGRA F EA+
Sbjct: 553 KPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEAL 612
Query: 608 AFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLYAASG 667
+ M++ PDSAVWGALLS+C IH+E+++GE VA+K+ +NGG +VLMSNLYA
Sbjct: 613 YLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEA 672
Query: 668 RWNDVARVRKMMREMGEDGCSGVS 691
W+DV RVR MM++ G DG GVS
Sbjct: 673 MWDDVVRVRNMMKDNGYDGYLGVS 690
BLAST of Sed0008900 vs. ExPASy Swiss-Prot
Match:
Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)
HSP 1 Score: 386.3 bits (991), Expect = 7.1e-106
Identity = 210/614 (34.20%), Postives = 339/614 (55.21%), Query Frame = 0
Query: 88 VSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVNGYSRNGFGFDAFEVFVEMR-RR 147
+ AFL ++ + G + + +F + E++L SWN LV GY++ G+ +A ++ M
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 148 GFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDLDSQVKNVLVFMYGKCADLEGV 207
G P T ++ +CG +GK VH ++ G +LD V N L+ MY KC D++
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 208 ELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRMLEECVDANSVTMVSILSA---- 267
LLF + ++SWN +I + +NG E + +F M VD + +T+ S++SA
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 268 --NADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAELVYMSQCRKDLVSLTAIL 327
IH Y TG D+SV SL Y+ G AE ++ RKD+VS T ++
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 328 SGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFEHLGIGLAFHGYGVKSGLV 387
SGY + Y M +K D + + ++ + L G+ H +K+ L+
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 388 IDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVISGYAQAGRSIEAMALFCQM 447
+VAN I+MYSK ID L +F + K + SW S+I+G R EA+ QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 448 KLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDLEGFVGTALIDMYAKCGRM 507
K++ P++ITL + L+AC + G L G+++H ++LR V L+ F+ AL+DMY +CGRM
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 550
Query: 508 DFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMMEKGIKPNKITFSGILAAC 567
+ A F S K+ + SWN +++GY G + + + +M++ ++P++ITF +L C
Sbjct: 551 NTAWSQFNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 610
Query: 568 THGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFFEEAIAFVKNMEMNPDSAV 627
+ +V +G YF M E++G+ P +H A +V LLGRAG +EA F++ M + PD AV
Sbjct: 611 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 670
Query: 628 WGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLYAASGRWNDVARVRKMMRE 687
WGALL++C IH ++ LGE A+ + ++ G+++L+ NLYA G+W +VA+VR+MM+E
Sbjct: 671 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 730
Query: 688 MG---EDGCSGVSL 692
G + GCS V +
Sbjct: 731 NGLTVDAGCSWVEV 741
BLAST of Sed0008900 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 384.4 bits (986), Expect = 2.7e-105
Identity = 213/630 (33.81%), Postives = 339/630 (53.81%), Query Frame = 0
Query: 78 IKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVNGYSRNGFGFDAF 137
+K G + ++V A + Y G V + +LFD +PE++LVSWN+++ +S NGF ++F
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 138 EVFVEMRRR----GFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDLDSQVKNVL 197
+ EM F P T+V ++P C + GK VH ++K LD + + N L
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 198 VFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRMLE--ECVDA 257
+ MY KC + +++F K+VVSWNT++G F G V ++ML E V A
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 258 NSVTMVSIL------SANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAELVY 317
+ VT+++ + S +HCY+ K V + V + V SY +CG + A+ V+
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453
Query: 318 MSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFEHLG 377
K + S A++ G+A+ D + + +M+ + D+ + ++ + + L
Sbjct: 454 HGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR 513
Query: 378 IGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVISGYA 437
+G HG+ +++ L D V +S+Y ++ V +LF M++K L SWN+VI+GY
Sbjct: 514 LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYL 573
Query: 438 QAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDLEGF 497
Q G A+ +F QM L G I++ + AC +L G + H Y L++ ++ + F
Sbjct: 574 QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF 633
Query: 498 VGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMMEKG 557
+ +LIDMYAK G + + +VF +KE ASWN+MI GYG+ G AI + +M G
Sbjct: 634 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 693
Query: 558 IKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFFEEA 617
P+ +TF G+L AC H GL+ EG +Y MK FG+ P +H A ++ +LGRAG ++A
Sbjct: 694 HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKA 753
Query: 618 IAFV-KNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLYAA 677
+ V + M D +W +LLSSC IHQ +++GE VA KL +VL+SNLYA
Sbjct: 754 LRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAG 813
Query: 678 SGRWNDVARVRKMMREMG---EDGCSGVSL 692
G+W DV +VR+ M EM + GCS + L
Sbjct: 814 LGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843
BLAST of Sed0008900 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 372.1 bits (954), Expect = 1.4e-101
Identity = 206/631 (32.65%), Postives = 330/631 (52.30%), Query Frame = 0
Query: 69 EANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVNGYS 128
E Q+ P K G Q + T + L+ + G V + R+F+ I K V ++ ++ G++
Sbjct: 52 ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFA 111
Query: 129 RNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDLDSQ 188
+ A + FV MR P L+ CG++ GK +H L +K+G LD
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171
Query: 189 VKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRMLEEC 248
L MY KC + +F E+ +VSWNT++ + QNG A+ + K M EE
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231
Query: 249 VDANSVTMVSILSANAD------PDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAE 308
+ + +T+VS+L A + IH YA ++G V++ T+LV Y +CG + A
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 309 LVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFE 368
++ +++VS +++ Y + + + ++ +M +K V+++G +
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 369 HLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVIS 428
L G H V+ GL + V N ISMY K ++D S+F ++ + L SWN++I
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 429 GYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDL 488
G+AQ GR I+A+ F QM+ PD+ T S+++A + H + +H ++R+ +D
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471
Query: 489 EGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMM 548
FV TAL+DMYAKCG + A +F M E + +WN+MI GYG GF A+ + +M
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531
Query: 549 EKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFF 608
+ IKPN +TF +++AC+H GLVE G K F +MKE + I H +MV LLGRAG
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591
Query: 609 EEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLY 668
EA F+ M + P V+GA+L +C IH+ V E A++L + +GG+ VL++N+Y
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651
Query: 669 AASGRWNDVARVRKMMREMGEDGCSGVSLME 694
A+ W V +VR M G G S++E
Sbjct: 652 RAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682
BLAST of Sed0008900 vs. ExPASy Swiss-Prot
Match:
Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)
HSP 1 Score: 368.2 bits (944), Expect = 2.0e-100
Identity = 209/701 (29.81%), Postives = 375/701 (53.50%), Query Frame = 0
Query: 1 MQLTNLSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSS 60
+ L S+ + S++ + + L + ++L + + P STF L+KA V++ +
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA-CVALKNF 155
Query: 61 SAPSYAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSW 120
+ + L G D +V+++ + Y + G + +LFD + +KD V W
Sbjct: 156 KGIDFLSDTVSSL-------GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIW 215
Query: 121 NALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIK 180
N ++NGY++ G + F MR P T ++ C ++ L G +H L +
Sbjct: 216 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVV 275
Query: 181 AGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFV 240
+G+D + +KN L+ MY KC + LF V+WN +I + Q+G E++
Sbjct: 276 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 335
Query: 241 FKRMLEECVDANSVTMVSILSANADPDS------IHCYATKTGLVEDVSVVTSLVCSYVR 300
F M+ V +++T S+L + + ++ IHCY + + D+ + ++L+ +Y +
Sbjct: 336 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK 395
Query: 301 CGKVLLAELVYMSQCRK-DLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVG 360
C V +A+ ++ SQC D+V TA++SGY ++++ + + + + + +V
Sbjct: 396 CRGVSMAQNIF-SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 455
Query: 361 IIQGITSFEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKP 420
I+ I L +G HG+ +K G C + I MY+K ++ +F+ + ++
Sbjct: 456 ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 515
Query: 421 LSSWNSVISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHC 480
+ SWNS+I+ AQ+ A+ +F QM +SG D +++++ LSAC + FG+ +H
Sbjct: 516 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 575
Query: 481 YILRNNVDLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNH 540
+++++++ + + + LIDMYAKCG + A VFK+MKE + SWNS+I+ G G
Sbjct: 576 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 635
Query: 541 AILCYTKMMEK-GIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASM 600
++ + +M+EK GI+P++ITF I+++C H G V+EG ++F+ M E++GI P+ +H A +
Sbjct: 636 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 695
Query: 601 VGLLGRAGFFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNG 660
V L GRAG EA VK+M PD+ VWG LL +C +H+ V+L E + KL+ N
Sbjct: 696 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 755
Query: 661 GFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLME 694
G++VL+SN +A + W V +VR +M+E G S +E
Sbjct: 756 GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787
BLAST of Sed0008900 vs. ExPASy TrEMBL
Match:
A0A6J1GEF9 (pentatricopeptide repeat-containing protein At2g04860 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453241 PE=4 SV=1)
HSP 1 Score: 1194.5 bits (3089), Expect = 0.0e+00
Identity = 588/699 (84.12%), Postives = 643/699 (91.99%), Query Frame = 0
Query: 3 LTNLSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSS- 62
L +LSL++ H AFKSY+E KISTPPLL+FRQLLR R+KP DSTFSLLIKAFVVS SSSS
Sbjct: 10 LASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSF 69
Query: 63 AP----SYAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDL 122
AP AK+EANQLQ HFIKWGFDQFLYVSTAFLDLYSKLG VKA+RRLFDDIPEKD+
Sbjct: 70 APLSCSENAKAEANQLQIHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDV 129
Query: 123 VSWNALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHAL 182
VSWNAL++GYSR+G+ DAFE+FVEMRRRGF PCQRT+V L+PSCG Q LF QGKC+HAL
Sbjct: 130 VSWNALISGYSRSGYNHDAFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFAQGKCIHAL 189
Query: 183 SIKAGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEA 242
+KAGLDLDSQVKN L MYGKCADLEGVELLFGE IEK+VVSWNT+IGAFGQNGFFVEA
Sbjct: 190 GVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEA 249
Query: 243 MFVFKRMLEECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGK 302
M VFK+MLEE +D NSVTMVSILSANA+P SIHCYATKTGLVE+VSVVTSL+CSYVRCG
Sbjct: 250 MLVFKQMLEERIDTNSVTMVSILSANANPRSIHCYATKTGLVENVSVVTSLICSYVRCGC 309
Query: 303 VLLAELVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQG 362
+ +AEL+YMS+ +K+LV+LTAI+SGYAEK DMGSVVKLYS +QHL+MKLDAVAMVGIIQG
Sbjct: 310 IQIAELIYMSKLQKNLVALTAIISGYAEKGDMGSVVKLYSRVQHLEMKLDAVAMVGIIQG 369
Query: 363 ITSFEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSW 422
IT +H GIGLAFHGYG+KSGL+IDCLVANGFISMYS+FDDIDAV SLFQEM EK LSSW
Sbjct: 370 ITYPDHSGIGLAFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMREKTLSSW 429
Query: 423 NSVISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILR 482
NSVIS AQAGRSI+AMALF QMKLSGYGPDSITLASLLSACCQNGNLHFGE +H YILR
Sbjct: 430 NSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEIIHSYILR 489
Query: 483 NNVDLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILC 542
NN+DLEGFVGTALIDMY KCGRMDFAE+VFKSMKEPCLASWNS+ISGYGLFGF+NHA LC
Sbjct: 490 NNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSLISGYGLFGFNNHAFLC 549
Query: 543 YTKMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLG 602
YTKM+EKGIKPNKITFSGILAACTHGGLVEEGR YF++MK+E GIVPESQHCASMVGLLG
Sbjct: 550 YTKMLEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLG 609
Query: 603 RAGFFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVL 662
RAG FEEAI F+KNME+NPDSAVWGALL++CCIHQEVKLGE VAK+LLFS+ RNGGFFVL
Sbjct: 610 RAGLFEEAILFIKNMEVNPDSAVWGALLNACCIHQEVKLGESVAKRLLFSNSRNGGFFVL 669
Query: 663 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 697
MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS
Sbjct: 670 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 708
BLAST of Sed0008900 vs. ExPASy TrEMBL
Match:
A0A6J1IKP6 (pentatricopeptide repeat-containing protein At2g04860 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477926 PE=4 SV=1)
HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 586/699 (83.83%), Postives = 642/699 (91.85%), Query Frame = 0
Query: 3 LTNLSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSS- 62
L +LSL++ H AFKSY+E KISTPPLL+FRQLLR R+KP DSTFSLLIKAFVVS SSSS
Sbjct: 10 LASLSLSTFHSAFKSYVEGKISTPPLLVFRQLLRCRVKPNDSTFSLLIKAFVVSSSSSSF 69
Query: 63 APS----YAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDL 122
APS A++EANQLQ HFIKWGFDQFLYVSTAFLDLYSKLG VKA+RRLFDDIPEKD+
Sbjct: 70 APSSCSENAEAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAARRLFDDIPEKDV 129
Query: 123 VSWNALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHAL 182
VSWNAL++GYSR+GF D FE+FVEMRRRGF PCQRT+V L+PSCG Q LFVQGKC+HAL
Sbjct: 130 VSWNALISGYSRSGFNHDTFELFVEMRRRGFNPCQRTLVSLIPSCGTQHLFVQGKCIHAL 189
Query: 183 SIKAGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEA 242
+KAGLDLDSQVKN L MYGKCADLEGVELLFGE IEK+VVSWNT+IGAFGQNGFFVEA
Sbjct: 190 GVKAGLDLDSQVKNSLASMYGKCADLEGVELLFGEIIEKNVVSWNTMIGAFGQNGFFVEA 249
Query: 243 MFVFKRMLEECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGK 302
M VFK+MLEE ++ +SVTMVSILSANA+P SIHCYATKTGL+E+VSVVTSL+CSYV+CG
Sbjct: 250 MLVFKQMLEESINTSSVTMVSILSANANPRSIHCYATKTGLMENVSVVTSLICSYVKCGC 309
Query: 303 VLLAELVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQG 362
+ +AE +YMS+ +K+LV+LTAI+SGYAEK DMG+VVKLYS +QHL+MKLDAVAMVGIIQG
Sbjct: 310 IHIAEQIYMSKLQKNLVALTAIISGYAEKGDMGAVVKLYSRVQHLEMKLDAVAMVGIIQG 369
Query: 363 ITSFEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSW 422
IT +H GIGL+FHGYG+KSGL+IDCLVANGFISMYS+FDDIDAV SLFQEM EK LSSW
Sbjct: 370 ITYPDHSGIGLSFHGYGLKSGLIIDCLVANGFISMYSRFDDIDAVFSLFQEMHEKTLSSW 429
Query: 423 NSVISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILR 482
NSVIS AQAGRSI+AMALF QMKLSGYGPDSITLASLLSACCQNGNLHFGE LH YILR
Sbjct: 430 NSVISSCAQAGRSIDAMALFSQMKLSGYGPDSITLASLLSACCQNGNLHFGEILHSYILR 489
Query: 483 NNVDLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILC 542
NN+DLEGFVGTALIDMY KCGRMDFAE+VFKSMKEPCLASWNSMISGYGLFGFDNH LC
Sbjct: 490 NNLDLEGFVGTALIDMYVKCGRMDFAEKVFKSMKEPCLASWNSMISGYGLFGFDNHVFLC 549
Query: 543 YTKMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLG 602
YTKMMEKGIKPNKITFSGILAACTHGGLVEEGR YF++MK+E GIVPESQHCASMVGLLG
Sbjct: 550 YTKMMEKGIKPNKITFSGILAACTHGGLVEEGRTYFEIMKKELGIVPESQHCASMVGLLG 609
Query: 603 RAGFFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVL 662
RAG FEEAI F+KNME+NPDSAVWGA LS+CCIHQEVKLGE VAKKLLFS+CRNGGFFVL
Sbjct: 610 RAGLFEEAILFIKNMEVNPDSAVWGAFLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVL 669
Query: 663 MSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 697
MSNLYAASGRWNDVA+VRKMMREMGEDGCSGVSLMEWIS
Sbjct: 670 MSNLYAASGRWNDVAKVRKMMREMGEDGCSGVSLMEWIS 708
BLAST of Sed0008900 vs. ExPASy TrEMBL
Match:
A0A6J1BXV1 (pentatricopeptide repeat-containing protein At2g04860 OS=Momordica charantia OX=3673 GN=LOC111005714 PE=4 SV=1)
HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 573/696 (82.33%), Postives = 629/696 (90.37%), Query Frame = 0
Query: 6 LSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSS-APS 65
LSL++ H AFKSYIE KIST PLL+FR+LLRYR+ P DSTFSLLIKAFV+S SSSS AP+
Sbjct: 13 LSLSTFHSAFKSYIEGKISTSPLLLFRRLLRYRVTPNDSTFSLLIKAFVLSSSSSSFAPA 72
Query: 66 ----YAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSW 125
AK+EANQLQ HF+KWGFDQFLYVSTAFL+LYSKLG VKA+RRLFDDIPEKD+V W
Sbjct: 73 SSSENAKAEANQLQTHFVKWGFDQFLYVSTAFLNLYSKLGHVKAARRLFDDIPEKDVVLW 132
Query: 126 NALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIK 185
NAL++GYSR+G+ DAFE+FVEMRRRGF P QRTVV L+P+CG+Q+LFVQGK +HAL IK
Sbjct: 133 NALISGYSRSGYSHDAFELFVEMRRRGFKPRQRTVVSLIPACGSQQLFVQGKSIHALGIK 192
Query: 186 AGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFV 245
AGLDLDS VKN L MY KC+D+EGVEL FGE +EKSVVSWNT IGAFGQNGFFVEAM V
Sbjct: 193 AGLDLDSHVKNALASMYAKCSDVEGVELFFGEMMEKSVVSWNTRIGAFGQNGFFVEAMLV 252
Query: 246 FKRMLEECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLL 305
FK+MLEE V+ANSVTMV+ILSANA+P SIHCYATKTGLVE+VSVVTSLVCSYVRCG + +
Sbjct: 253 FKQMLEESVNANSVTMVTILSANANPGSIHCYATKTGLVENVSVVTSLVCSYVRCGNIQI 312
Query: 306 AELVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITS 365
AEL+YMS +KDLVSLTAI+S YAEK D+ SVVKLYS MQHLDMKLDAVAM+GIIQGIT
Sbjct: 313 AELIYMSLLQKDLVSLTAIISSYAEKGDIKSVVKLYSRMQHLDMKLDAVAMIGIIQGITY 372
Query: 366 FEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSV 425
+H GIGL FHGYG+KSGL+IDCLVANGFISMYSKFDDI AV SLF EM EK LSSWN+V
Sbjct: 373 PDHFGIGLTFHGYGLKSGLIIDCLVANGFISMYSKFDDIAAVFSLFHEMHEKTLSSWNTV 432
Query: 426 ISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNV 485
IS AQAGRSI+AM LF +MKLSGYGPDSIT+ASLLSACCQNGNLHFGE+LHCY LRNN+
Sbjct: 433 ISSCAQAGRSIDAMVLFSKMKLSGYGPDSITIASLLSACCQNGNLHFGERLHCYNLRNNL 492
Query: 486 DLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTK 545
DLEGFVGTAL+DMY KCGR+DFAERVFKSMKEPCLASWNSMISGYGLFGFDNHA+LCYTK
Sbjct: 493 DLEGFVGTALVDMYVKCGRLDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHALLCYTK 552
Query: 546 MMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAG 605
M+EKGIKPNKITFSGILAACTHGGLV EG+ YFK+M EEFGI PE QHCASMVGLLGRAG
Sbjct: 553 MIEKGIKPNKITFSGILAACTHGGLVREGKTYFKIMMEEFGIAPELQHCASMVGLLGRAG 612
Query: 606 FFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSN 665
FEEAI F+KNME+NPDSAVWGALLS+CCIHQEVKLGE VAKKLLFS+CRNGGFFVLMSN
Sbjct: 613 LFEEAIVFIKNMEINPDSAVWGALLSACCIHQEVKLGESVAKKLLFSNCRNGGFFVLMSN 672
Query: 666 LYAASGRWNDVARVRKMMREMGEDGCSGVSLMEWIS 697
LYAAS RWNDVARVRKMMREMGEDGCSGVSLMEW S
Sbjct: 673 LYAASRRWNDVARVRKMMREMGEDGCSGVSLMEWTS 708
BLAST of Sed0008900 vs. ExPASy TrEMBL
Match:
A0A5D3CM04 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00360 PE=4 SV=1)
HSP 1 Score: 1154.0 bits (2984), Expect = 0.0e+00
Identity = 567/688 (82.41%), Postives = 623/688 (90.55%), Query Frame = 0
Query: 6 LSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSSAPSY 65
LSLT+ H AFK Y+E K TPPLL+FRQLLR++++P DSTFSLLIKAFVVS SSS
Sbjct: 13 LSLTTFHSAFKFYVEGKNFTPPLLLFRQLLRHQVRPNDSTFSLLIKAFVVS-SSSFCSEN 72
Query: 66 AKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVN 125
K+EANQLQ HFIKWGFDQFLYVSTAFLDLYS+LG VKA+RRLFDD PEKD+VSWNAL++
Sbjct: 73 EKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSRLGFVKAARRLFDDFPEKDVVSWNALIS 132
Query: 126 GYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDL 185
GY+R G+ DAF++FVEMRRRGF PCQRT+V L+PSCG QELFVQGK +H L +KAGLDL
Sbjct: 133 GYTRCGYSHDAFKLFVEMRRRGFDPCQRTLVSLMPSCGTQELFVQGKSIHGLGVKAGLDL 192
Query: 186 DSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRML 245
DSQVKN LV MYGKCADLEGV+LLFGE EK+VVSWNT+IGAFGQNGFF+EAM VFK+ML
Sbjct: 193 DSQVKNTLVSMYGKCADLEGVKLLFGEIGEKNVVSWNTMIGAFGQNGFFLEAMLVFKQML 252
Query: 246 EECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAELVY 305
EE V ANSVTMVSILSANA+ IHCYATK GLVE+VSVVTSLVCSYV+CG + +AEL+Y
Sbjct: 253 EESVSANSVTMVSILSANANAGCIHCYATKIGLVENVSVVTSLVCSYVKCGYIEIAELIY 312
Query: 306 MSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFEHLG 365
MS+ +K+LV+LTAI+S YAEK DMGSVV+LYS +QHLDMKLDAVAMVGIIQG T +H G
Sbjct: 313 MSKLQKNLVALTAIISRYAEKGDMGSVVRLYSLVQHLDMKLDAVAMVGIIQGFTYPDHTG 372
Query: 366 IGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVISGYA 425
IGLAFHGYGVKSGL+IDCLVANGFISMYSKFD+IDAV SLFQEM +K LSSWNSVIS A
Sbjct: 373 IGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSSA 432
Query: 426 QAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDLEGF 485
QAGRSI+AMALF QM LSGYGPDSITLASLLSACCQNGNLHFGE LHCYILRN+VDLEGF
Sbjct: 433 QAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNSVDLEGF 492
Query: 486 VGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMMEKG 545
VGTAL+DMY KCGR+DFAE VFKSMKEPCLASWNS+ISGYGLFGF N A+LCYTKMMEKG
Sbjct: 493 VGTALVDMYVKCGRIDFAENVFKSMKEPCLASWNSLISGYGLFGFHNRALLCYTKMMEKG 552
Query: 546 IKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFFEEA 605
IKPNKITFSGILAACTHGGLVEEGRKYFK MK+EFGIVPESQHCASMVGLLGRAG FEEA
Sbjct: 553 IKPNKITFSGILAACTHGGLVEEGRKYFKTMKKEFGIVPESQHCASMVGLLGRAGLFEEA 612
Query: 606 IAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLYAAS 665
I F+KNME NPDSAVWGALLS+CCIHQE+KLGE VAKKL FS+CRNGGFFVLMSNLYAAS
Sbjct: 613 IVFIKNMETNPDSAVWGALLSACCIHQEIKLGESVAKKLFFSNCRNGGFFVLMSNLYAAS 672
Query: 666 GRWNDVARVRKMMREMGEDGCSGVSLME 694
GRWNDVA++RKMMREMGEDGCSGVSLME
Sbjct: 673 GRWNDVAKIRKMMREMGEDGCSGVSLME 699
BLAST of Sed0008900 vs. ExPASy TrEMBL
Match:
A0A1S4DTH7 (pentatricopeptide repeat-containing protein At2g04860 OS=Cucumis melo OX=3656 GN=LOC107990461 PE=4 SV=1)
HSP 1 Score: 1154.0 bits (2984), Expect = 0.0e+00
Identity = 567/688 (82.41%), Postives = 623/688 (90.55%), Query Frame = 0
Query: 6 LSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSSAPSY 65
LSLT+ H AFK Y+E K TPPLL+FRQLLR++++P DSTFSLLIKAFVVS SSS
Sbjct: 13 LSLTTFHSAFKFYVEGKNFTPPLLLFRQLLRHQVRPNDSTFSLLIKAFVVS-SSSFCSEN 72
Query: 66 AKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVN 125
K+EANQLQ HFIKWGFDQFLYVSTAFLDLYS+LG VKA+RRLFDD PEKD+VSWNAL++
Sbjct: 73 EKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSRLGFVKAARRLFDDFPEKDVVSWNALIS 132
Query: 126 GYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDL 185
GY+R G+ DAF++FVEMRRRGF PCQRT+V L+PSCG QELFVQGK +H L +KAGLDL
Sbjct: 133 GYTRCGYSHDAFKLFVEMRRRGFDPCQRTLVSLMPSCGTQELFVQGKSIHGLGVKAGLDL 192
Query: 186 DSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRML 245
DSQVKN LV MYGKCADLEGV+LLFGE EK+VVSWNT+IGAFGQNGFF+EAM VFK+ML
Sbjct: 193 DSQVKNTLVSMYGKCADLEGVKLLFGEIGEKNVVSWNTMIGAFGQNGFFLEAMLVFKQML 252
Query: 246 EECVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAELVY 305
EE V ANSVTMVSILSANA+ IHCYATK GLVE+VSVVTSLVCSYV+CG + +AEL+Y
Sbjct: 253 EESVSANSVTMVSILSANANAGCIHCYATKIGLVENVSVVTSLVCSYVKCGYIEIAELIY 312
Query: 306 MSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFEHLG 365
MS+ +K+LV+LTAI+S YAEK DMGSVV+LYS +QHLDMKLDAVAMVGIIQG T +H G
Sbjct: 313 MSKLQKNLVALTAIISRYAEKGDMGSVVRLYSLVQHLDMKLDAVAMVGIIQGFTYPDHTG 372
Query: 366 IGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVISGYA 425
IGLAFHGYGVKSGL+IDCLVANGFISMYSKFD+IDAV SLFQEM +K LSSWNSVIS A
Sbjct: 373 IGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSSA 432
Query: 426 QAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDLEGF 485
QAGRSI+AMALF QM LSGYGPDSITLASLLSACCQNGNLHFGE LHCYILRN+VDLEGF
Sbjct: 433 QAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNSVDLEGF 492
Query: 486 VGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMMEKG 545
VGTAL+DMY KCGR+DFAE VFKSMKEPCLASWNS+ISGYGLFGF N A+LCYTKMMEKG
Sbjct: 493 VGTALVDMYVKCGRIDFAENVFKSMKEPCLASWNSLISGYGLFGFHNRALLCYTKMMEKG 552
Query: 546 IKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFFEEA 605
IKPNKITFSGILAACTHGGLVEEGRKYFK MK+EFGIVPESQHCASMVGLLGRAG FEEA
Sbjct: 553 IKPNKITFSGILAACTHGGLVEEGRKYFKTMKKEFGIVPESQHCASMVGLLGRAGLFEEA 612
Query: 606 IAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLYAAS 665
I F+KNME NPDSAVWGALLS+CCIHQE+KLGE VAKKL FS+CRNGGFFVLMSNLYAAS
Sbjct: 613 IVFIKNMETNPDSAVWGALLSACCIHQEIKLGESVAKKLFFSNCRNGGFFVLMSNLYAAS 672
Query: 666 GRWNDVARVRKMMREMGEDGCSGVSLME 694
GRWNDVA++RKMMREMGEDGCSGVSLME
Sbjct: 673 GRWNDVAKIRKMMREMGEDGCSGVSLME 699
BLAST of Sed0008900 vs. TAIR 10
Match:
AT2G04860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 699.5 bits (1804), Expect = 2.7e-201
Identity = 351/684 (51.32%), Postives = 472/684 (69.01%), Query Frame = 0
Query: 8 LTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSSSAPSYAK 67
L+ H KS I +IS+ P+ IFR LLR + P T S+ ++A S +S K
Sbjct: 13 LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNS------FK 72
Query: 68 SEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVNGY 127
+ Q+Q H K G D+F+YV T+ L+LY K GCV +++ LFD++PE+D V WNAL+ GY
Sbjct: 73 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY 132
Query: 128 SRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDLDS 187
SRNG+ DA+++F+ M ++GF P T+V L+P CG QG+ VH ++ K+GL+LDS
Sbjct: 133 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 192
Query: 188 QVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRMLEE 247
QVKN L+ Y KCA+L E+LF E +KS VSWNT+IGA+ Q+G EA+ VFK M E+
Sbjct: 193 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 252
Query: 248 CVDANSVTMVSILSANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAELVYMS 307
V+ + VT++++LSA+ + +HC K G+V D+SVVTSLVC+Y RCG ++ AE +Y S
Sbjct: 253 NVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS 312
Query: 308 QCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFEHLGIG 367
+ +V LT+I+S YAEK DM V +S+ + L MK+DAVA+VGI+ G H+ IG
Sbjct: 313 AKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 372
Query: 368 LAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVISGYAQA 427
++ HGY +KSGL LV NG I+MYSKFDD++ VL LF+++ E PL SWNSVISG Q+
Sbjct: 373 MSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQS 432
Query: 428 GRSIEAMALFCQMKLS-GYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDLEGFV 487
GR+ A +F QM L+ G PD+IT+ASLL+ C Q L+ G++LH Y LRNN + E FV
Sbjct: 433 GRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFV 492
Query: 488 GTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMMEKGI 547
TALIDMYAKCG AE VFKS+K PC A+WNSMISGY L G + A+ CY +M EKG+
Sbjct: 493 CTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGL 552
Query: 548 KPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFFEEAI 607
KP++ITF G+L+AC HGG V+EG+ F+ M +EFGI P QH A MVGLLGRA F EA+
Sbjct: 553 KPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEAL 612
Query: 608 AFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLYAASG 667
+ M++ PDSAVWGALLS+C IH+E+++GE VA+K+ +NGG +VLMSNLYA
Sbjct: 613 YLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEA 672
Query: 668 RWNDVARVRKMMREMGEDGCSGVS 691
W+DV RVR MM++ G DG GVS
Sbjct: 673 MWDDVVRVRNMMKDNGYDGYLGVS 690
BLAST of Sed0008900 vs. TAIR 10
Match:
AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 386.3 bits (991), Expect = 5.0e-107
Identity = 210/614 (34.20%), Postives = 339/614 (55.21%), Query Frame = 0
Query: 88 VSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVNGYSRNGFGFDAFEVFVEMR-RR 147
+ AFL ++ + G + + +F + E++L SWN LV GY++ G+ +A ++ M
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 148 GFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDLDSQVKNVLVFMYGKCADLEGV 207
G P T ++ +CG +GK VH ++ G +LD V N L+ MY KC D++
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 208 ELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRMLEECVDANSVTMVSILSA---- 267
LLF + ++SWN +I + +NG E + +F M VD + +T+ S++SA
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 268 --NADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAELVYMSQCRKDLVSLTAIL 327
IH Y TG D+SV SL Y+ G AE ++ RKD+VS T ++
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 328 SGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFEHLGIGLAFHGYGVKSGLV 387
SGY + Y M +K D + + ++ + L G+ H +K+ L+
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 388 IDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVISGYAQAGRSIEAMALFCQM 447
+VAN I+MYSK ID L +F + K + SW S+I+G R EA+ QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 448 KLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDLEGFVGTALIDMYAKCGRM 507
K++ P++ITL + L+AC + G L G+++H ++LR V L+ F+ AL+DMY +CGRM
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 550
Query: 508 DFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMMEKGIKPNKITFSGILAAC 567
+ A F S K+ + SWN +++GY G + + + +M++ ++P++ITF +L C
Sbjct: 551 NTAWSQFNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 610
Query: 568 THGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFFEEAIAFVKNMEMNPDSAV 627
+ +V +G YF M E++G+ P +H A +V LLGRAG +EA F++ M + PD AV
Sbjct: 611 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 670
Query: 628 WGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLYAASGRWNDVARVRKMMRE 687
WGALL++C IH ++ LGE A+ + ++ G+++L+ NLYA G+W +VA+VR+MM+E
Sbjct: 671 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 730
Query: 688 MG---EDGCSGVSL 692
G + GCS V +
Sbjct: 731 NGLTVDAGCSWVEV 741
BLAST of Sed0008900 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 384.4 bits (986), Expect = 1.9e-106
Identity = 213/630 (33.81%), Postives = 339/630 (53.81%), Query Frame = 0
Query: 78 IKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVNGYSRNGFGFDAF 137
+K G + ++V A + Y G V + +LFD +PE++LVSWN+++ +S NGF ++F
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 138 EVFVEMRRR----GFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDLDSQVKNVL 197
+ EM F P T+V ++P C + GK VH ++K LD + + N L
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 198 VFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRMLE--ECVDA 257
+ MY KC + +++F K+VVSWNT++G F G V ++ML E V A
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 258 NSVTMVSIL------SANADPDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAELVY 317
+ VT+++ + S +HCY+ K V + V + V SY +CG + A+ V+
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453
Query: 318 MSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFEHLG 377
K + S A++ G+A+ D + + +M+ + D+ + ++ + + L
Sbjct: 454 HGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR 513
Query: 378 IGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVISGYA 437
+G HG+ +++ L D V +S+Y ++ V +LF M++K L SWN+VI+GY
Sbjct: 514 LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYL 573
Query: 438 QAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDLEGF 497
Q G A+ +F QM L G I++ + AC +L G + H Y L++ ++ + F
Sbjct: 574 QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF 633
Query: 498 VGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMMEKG 557
+ +LIDMYAK G + + +VF +KE ASWN+MI GYG+ G AI + +M G
Sbjct: 634 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 693
Query: 558 IKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFFEEA 617
P+ +TF G+L AC H GL+ EG +Y MK FG+ P +H A ++ +LGRAG ++A
Sbjct: 694 HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKA 753
Query: 618 IAFV-KNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLYAA 677
+ V + M D +W +LLSSC IHQ +++GE VA KL +VL+SNLYA
Sbjct: 754 LRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAG 813
Query: 678 SGRWNDVARVRKMMREMG---EDGCSGVSL 692
G+W DV +VR+ M EM + GCS + L
Sbjct: 814 LGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843
BLAST of Sed0008900 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 372.1 bits (954), Expect = 9.9e-103
Identity = 206/631 (32.65%), Postives = 330/631 (52.30%), Query Frame = 0
Query: 69 EANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSWNALVNGYS 128
E Q+ P K G Q + T + L+ + G V + R+F+ I K V ++ ++ G++
Sbjct: 52 ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFA 111
Query: 129 RNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIKAGLDLDSQ 188
+ A + FV MR P L+ CG++ GK +H L +K+G LD
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171
Query: 189 VKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFVFKRMLEEC 248
L MY KC + +F E+ +VSWNT++ + QNG A+ + K M EE
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231
Query: 249 VDANSVTMVSILSANAD------PDSIHCYATKTGLVEDVSVVTSLVCSYVRCGKVLLAE 308
+ + +T+VS+L A + IH YA ++G V++ T+LV Y +CG + A
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 309 LVYMSQCRKDLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVGIIQGITSFE 368
++ +++VS +++ Y + + + ++ +M +K V+++G +
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 369 HLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKPLSSWNSVIS 428
L G H V+ GL + V N ISMY K ++D S+F ++ + L SWN++I
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 429 GYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHCYILRNNVDL 488
G+AQ GR I+A+ F QM+ PD+ T S+++A + H + +H ++R+ +D
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471
Query: 489 EGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNHAILCYTKMM 548
FV TAL+DMYAKCG + A +F M E + +WN+MI GYG GF A+ + +M
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531
Query: 549 EKGIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASMVGLLGRAGFF 608
+ IKPN +TF +++AC+H GLVE G K F +MKE + I H +MV LLGRAG
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591
Query: 609 EEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNGGFFVLMSNLY 668
EA F+ M + P V+GA+L +C IH+ V E A++L + +GG+ VL++N+Y
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651
Query: 669 AASGRWNDVARVRKMMREMGEDGCSGVSLME 694
A+ W V +VR M G G S++E
Sbjct: 652 RAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682
BLAST of Sed0008900 vs. TAIR 10
Match:
AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 368.2 bits (944), Expect = 1.4e-101
Identity = 209/701 (29.81%), Postives = 375/701 (53.50%), Query Frame = 0
Query: 1 MQLTNLSLTSIHYAFKSYIESKISTPPLLIFRQLLRYRIKPIDSTFSLLIKAFVVSISSS 60
+ L S+ + S++ + + L + ++L + + P STF L+KA V++ +
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA-CVALKNF 155
Query: 61 SAPSYAKSEANQLQPHFIKWGFDQFLYVSTAFLDLYSKLGCVKASRRLFDDIPEKDLVSW 120
+ + L G D +V+++ + Y + G + +LFD + +KD V W
Sbjct: 156 KGIDFLSDTVSSL-------GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIW 215
Query: 121 NALVNGYSRNGFGFDAFEVFVEMRRRGFGPCQRTVVGLVPSCGNQELFVQGKCVHALSIK 180
N ++NGY++ G + F MR P T ++ C ++ L G +H L +
Sbjct: 216 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVV 275
Query: 181 AGLDLDSQVKNVLVFMYGKCADLEGVELLFGETIEKSVVSWNTVIGAFGQNGFFVEAMFV 240
+G+D + +KN L+ MY KC + LF V+WN +I + Q+G E++
Sbjct: 276 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 335
Query: 241 FKRMLEECVDANSVTMVSILSANADPDS------IHCYATKTGLVEDVSVVTSLVCSYVR 300
F M+ V +++T S+L + + ++ IHCY + + D+ + ++L+ +Y +
Sbjct: 336 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK 395
Query: 301 CGKVLLAELVYMSQCRK-DLVSLTAILSGYAEKRDMGSVVKLYSEMQHLDMKLDAVAMVG 360
C V +A+ ++ SQC D+V TA++SGY ++++ + + + + + +V
Sbjct: 396 CRGVSMAQNIF-SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 455
Query: 361 IIQGITSFEHLGIGLAFHGYGVKSGLVIDCLVANGFISMYSKFDDIDAVLSLFQEMDEKP 420
I+ I L +G HG+ +K G C + I MY+K ++ +F+ + ++
Sbjct: 456 ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 515
Query: 421 LSSWNSVISGYAQAGRSIEAMALFCQMKLSGYGPDSITLASLLSACCQNGNLHFGEKLHC 480
+ SWNS+I+ AQ+ A+ +F QM +SG D +++++ LSAC + FG+ +H
Sbjct: 516 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 575
Query: 481 YILRNNVDLEGFVGTALIDMYAKCGRMDFAERVFKSMKEPCLASWNSMISGYGLFGFDNH 540
+++++++ + + + LIDMYAKCG + A VFK+MKE + SWNS+I+ G G
Sbjct: 576 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 635
Query: 541 AILCYTKMMEK-GIKPNKITFSGILAACTHGGLVEEGRKYFKLMKEEFGIVPESQHCASM 600
++ + +M+EK GI+P++ITF I+++C H G V+EG ++F+ M E++GI P+ +H A +
Sbjct: 636 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 695
Query: 601 VGLLGRAGFFEEAIAFVKNMEMNPDSAVWGALLSSCCIHQEVKLGECVAKKLLFSSCRNG 660
V L GRAG EA VK+M PD+ VWG LL +C +H+ V+L E + KL+ N
Sbjct: 696 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 755
Query: 661 GFFVLMSNLYAASGRWNDVARVRKMMREMGEDGCSGVSLME 694
G++VL+SN +A + W V +VR +M+E G S +E
Sbjct: 756 GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023543683.1 | 0.0e+00 | 84.41 | pentatricopeptide repeat-containing protein At2g04860 [Cucurbita pepo subsp. pep... | [more] |
XP_022950030.1 | 0.0e+00 | 84.12 | pentatricopeptide repeat-containing protein At2g04860 isoform X1 [Cucurbita mosc... | [more] |
XP_022977696.1 | 0.0e+00 | 83.83 | pentatricopeptide repeat-containing protein At2g04860 isoform X1 [Cucurbita maxi... | [more] |
KAG6603840.1 | 0.0e+00 | 83.98 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_038882792.1 | 0.0e+00 | 82.69 | pentatricopeptide repeat-containing protein At2g04860 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9SJ73 | 3.8e-200 | 51.32 | Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana OX... | [more] |
Q9M9E2 | 7.1e-106 | 34.20 | Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... | [more] |
Q0WN60 | 2.7e-105 | 33.81 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
Q3E6Q1 | 1.4e-101 | 32.65 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9STE1 | 2.0e-100 | 29.81 | Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GEF9 | 0.0e+00 | 84.12 | pentatricopeptide repeat-containing protein At2g04860 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1IKP6 | 0.0e+00 | 83.83 | pentatricopeptide repeat-containing protein At2g04860 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1BXV1 | 0.0e+00 | 82.33 | pentatricopeptide repeat-containing protein At2g04860 OS=Momordica charantia OX=... | [more] |
A0A5D3CM04 | 0.0e+00 | 82.41 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4DTH7 | 0.0e+00 | 82.41 | pentatricopeptide repeat-containing protein At2g04860 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT2G04860.1 | 2.7e-201 | 51.32 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G15510.1 | 5.0e-107 | 34.20 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G18485.1 | 1.9e-106 | 33.81 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G11290.1 | 9.9e-103 | 32.65 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21300.1 | 1.4e-101 | 29.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |