Sed0008860 (gene) Chayote v1

Overview


Name	Sed0008860
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RPM1-interacting protein 4-like
Location	LG07: 1934447 .. 1939635 (+)
RNA-Seq Expression	Sed0008860
Synteny	Sed0008860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTACAAACCCCAAATTCTCTCTCTAAAAACCCCCCCATTTTCTTTCTCTCAAAACCCCAAATTCTCTCTCTAAAAACCCTCGTAATAAACTTTTGATTCAATCCCAAAACCACTCTGTTCTTCTCCAATGGCGGTTAGTTGTTCTTTTTCCTTCATCTTTTTGTTATTTCTTGCTCTTGCCCATGTTTTGATTTTGAATTTGCCCTTTTCTGTTTTCGATATTTATGCGTTTTTATTTTGTGGGTATTGACTGTTTTTTTGTGTAGATCTGGAAATTGTTTGTCATAAATTAATTGGGCCAAAAGGGAAATTCAATTTTGTTTTTGTGTAGATCGATTTTGAAGGTTTTGGAATTGAGTTTCATCCTCTGTTTCTACATGGAGTTTCTCTGTTTTTTTTATCTCATATTTTCACTTTTAAACATAGAAGTGTATTTTTTTAATACATATTGGAGAGAGGGACAAAAACCAATTCTCAAGATCGATCCTGTGAAGTTGGTGTTGAACTAGTTTACAACTAAACAATGAAACTATTACGCCATTTGGTTAAACATAGAATATTTTATTTGGGATTCGACCCAAAATCAATTGGTTACTATGTATCCAAAAAACCTTACATAAAATATACAAATACTTTCAAATAATATGAGAGCATAGTTAAAATAAATTAATATCAATTAAGATAATCAACTGCGCTACTGCGCTACTGACCTTCGATTGTAACAAGTGTTTTCATTCACTTCCTTTTCTTGTCAAATTCAAAGAGGAGTGATTTTGAATTAATTTTACAAAAGCTTAATCACTTTGATTTTTGTGAAATTAAGTTTCACTCATTCCTCTTCAAATTGAAACACTTGCATTGTTTAAAAGTCAAAAGTGAGATGAAAAAACAGTTAAACCCCATCTAGAAATAGAGGATGAAACTGAATTATTAGCCAATAAATTCTATGGTTTATATTTTTTTGTCGGTGATTAAATTCATTTAATGCTATACTTGAAACTAATAATATATGTATGATAGCTTAAGTTTTAGTAAAGAGTAGCGTTTTCTTCAAATACGAAAAAAAGAAAAAAAAAGTAGTTTTAAATTATTATTTTTTTAGATTACAACAATTGAAGGTGGGAGACTTGAACCTAAGACCTCTGGTCATTAAGCATACACTAATGCCGCTGAGCAACTACTCATGTTAGGCAAAATAGTTTTAAATTGTTGAGCTTTACGGTATATTTGTTTTTTGTTTTTTTTGTACATAATAACCAATCATCAAATTTGTAGTGGTTTTTTTTTTTTTGAGAAACTCATTGTCAGTGTTTAGGCTATATGTAATGATTAATTAGTAGAAAATTTTGAAAATTTTGGGCAAAAGTAAATTAGTAAGTTATAAGATAATGGTTATTAAACGATTTTAAATAAGTAATTGGGATCAATAGTGATTATATAGATAATTATTATATATTATACGGATAACTATTATTTAAGGCTCCTACATTAGATGAACCAACCAGTCTTACTCACTAAACATTATCGTGCCTCGTATGGTCCCAACATAGAGTTTCTTACTCTAATGTGTATTAAAACATGTGCCAACAAATTAAAATTGAAAGAAGAATCACACCATAATCAAACGAAACATATTGTTAAAAATGTAAGTTTATTTGATCGAGTTGAGTCGAGCTCAGTAATGCGAGCTTGTCACCCAAATGAGGGCATCAAATACGTGAAAGTTGAATAACGTTAACATGCGTAACCATTTTTCACTCCGAAAAACTTTCACAACTCTACATTTTATATATGTAACATAATAAGGTTACTCATAAATTTCTTTGAGATGTAAATTATTCAAAAATAATAATTTGTATAACAACTAATGATATCAACATATATAAAATATAGGGTGTGTTTGGAGCACCAATTTAGTTATGATAGCGGAATGTTATGATAAACGGAGAATTGTAATGAACGATGAGTTATTATAAATGATATTTTAAGGGCAAGTTATTATAACGTGGATTATGATAAACGGTGTTTGAGGAGCGGATTATGTAAGAAAAAGTAATATATGTAAGGTTTAGATAAACGTGCATGTAGGTTTAGATAAACGGACCCACAAATTTAGGTAACTATCGTTTATAATAAGCGGTGGTACAAACATCGATCAGGTTATTATAATCAATCCAATCATCTACATAAATAAGGATCTAAACACACCCATAGGGTTTTCGTACACGAGGGAAGTTTTATTATTTTAAATACACACAGAAGAAACTTATTCCAAATGGATGTTAGTTTTGAAAGTAATGTTGTGTTTGTTTGAACAGCAACGGTCACATGTACCGGCGTTTGGGAACTGGGAAAGTGAAGGGAATGTTCCATACACAGTGTACTTCGACAAGGCGAGAAAGGGGAAAGGGGGCGGGCCGATGAGAAACCCAAACGATCCCGAGGAATATCCAGAACTGTTCGGTAATAGTACTGAAGAAGCTCCTCGCCCCAAAACTAAAAGTGACACTCCTGTTCCGGCCATTGATCCTTTGATCCACGCCCGGAAACACAGCCGCGACTACGCCAACTCTCCCGCCCACCGCGAGAACCCCGCTCGCTCCGATGGCAACCGCGGCAAGACCAAAGTGAAGCAGTCTCAGCGTGACGACGAACCTGTAAACTTTCTTACCTTCCAACTTCAGTTCTTCCAGTTTCTATTAGCTGTAAAATTGGGTTGCATTAGATAATGTGTTTGATAACTGTTTCATTTTTTGTTTTAAAAAATAATAATCGTATATATTTGATAATTAATTTTAATTTCATATTTTAAAAATTAAAAACCAAAAAACATGTTTAATAACTATTTTTTGTTTTTAAATATCACTTTTTTTTTATATAGTTTTTTACTCTTTATTCTTTATTTATTCATGCCTTTTTAAAACGAAAACTTATTTTTAAAAGGTGTTTTTTTTAAGCTTTTAGAATTTCTTTAATATTTTAACAATGTTTTTAATTTTAAAAACAAAAATCAAAATTGATTATCAAACTAACTCGTTTTTGAAATATTAAAAACAAAAAAGAAATAAGCATGAAGACCTTCTTTTGTTTTGGATTGATCAATCCATTCATAGATTTCATCCTATATATTAGGGCAATCCAACAACTCATACTCAGGTAGAGATGTCCACGGGGCGGGGCTGGGGAATGGCTTCCCCGACCCCGTCCCCGAAAAAATCCCCATTTTTTTTTTTCCGGAGATCGGGGTGGGGATCGGGTTCCCCGTGGGGATTTTTTACAATTTTTTTTTTCATTTTTTGGATAAAAAATTCAAAAAATTAGATTTTAAAAAAAATATATCTATAAATTTCAACTATAATGTTAATTATCAAAGAAAATATTCATATGCATAGAAAATATCATCCACAAAGATATATTTATTTGAAAATTAAAAGAGTAGAATTAAGAAAAAAAATATAAAATAAAATAAATAAAATAATCGGGGCAGAGATCAGGGAATCGGGGACGGGGAGTACAATCCCCATCTCCGGCCCGTTTAGCCAACGGGGATTTTTTCTCCCCCATCCCCGACCCCGTTCCCCGCGGGGAAAATGAACATCCCTATACTCAGGAAACGTTTTAAAAAAGAAAAACATGATAACTATATCTAACTTAAGTTACCTATTTGAGCATTTTCCTTAGCAATATCAATATGCTGATTACAACATATCTCATTAATTAGTCTTATACATATATAAGATTAAGAAAATCAGACTAGTCAAATATAAAAAATAATCATTAACATGATAACTTAAAAAAAATATTTTAAATATAGTTATTGATGTTAATGAGTATTATCACATATTTGATATAATATTAATCTTAATATGTATTTATATTATGAGGGTGACTGGCGCAGTTGGTTATCTTGTCTGTTATCAGGTTTTTTCTTTTGTACACTTCTAATTTCTGTTGATTCGTGGCATGTAGGCGGAAGGGACGGCGGTGCCGAAATTCGGGTCGTGGGATGTGAACAATCCGGCGTCGGCGGATGGGTTTACGCACATTTTTGGTAAAGTTCGTGAAGAAAAGATTGGACCCCCAACCCCCCAGCACCCACGTACTTCTGGTTCACCTTATAACAACAATGTTCATAACCAAAAACCCCAAGACAATGCCAAGGTACTAATTCAACTTTCTATTTTCTTCTTCAACTTTTTAATTGAATGGAAAATTAGTTTACAACCAAAAAATGAAATAAATTGTTAATTACAAATGATGTGATTCTTTTGTCTAATCACACACTTAACTTAAAGTGTTATTATTGGCATATATAAATAATCAATTGCAACCTAGTTCCTTGGTTTGTTTTTTGAGTACAAGTTGTCCTGGGAATACAGATTCTAGGGATCGAACCCGTGACCGTAGAGTGAAAATGAATTAACTGCAAACTAGATGACCAATCGTGCTACCGACCCATTCGATCAACCTGGTTCCTTGGTGATTAAGAACGATAATGACAATTTTTTTTTTGAATGTTTAATATATTATATGGGCTAAAATTTACTTTTTAAAATTATAAAAACTAATTTTTAACTTTCTCGATATCATTAATGGAAAGAGTTGGTGAGGTGTTAATTTCATTATGTTAACACCACAATTATAATTTCAATTTGAAAATTGACATTTGGCTTTAGTTGATTTAATATTAGTATAGTCTTATTTAGGGTTCGTGGTCTCCACCACTTTGTACTCTTAAAAAAAACTTATGGTAATTTCTTTTATTTTTATTTTGCAGGGATGCTGCTGCTTTCCATGGCTAAGAAAATAAATTTGAATTTAATGAATGAAAATTCAAATATCCTCTCCTCTCTTCCCCAATCTGCATCCACCAAAGGATTTTACTGTGCATAGTGGGCTCTGTTTATGGACTGTGTGCTGTTTTTTTTGTATTTATATTTATATACATAAAATTTATTTTTTCCCCTAGTGGGAGATATTTGTATTGGTTAGATCCACATTTATCTCCTTTTTTGGCTTATTATTCTGCAATATTTTCATTACTTTTCAAATTTTGATTATTTGGTTAATTTCCATACACTTCTTTTTTCAACTTATTGGTAAAATGGTATAGATGGATGGAAAATATAAGTAGAGTTCTCATGGCCTTTGAAAGGATGAAATATATTTTTACAGTTAAGAACCA

mRNA sequence

TTCTCTACAAACCCCAAATTCTCTCTCTAAAAACCCCCCCATTTTCTTTCTCTCAAAACCCCAAATTCTCTCTCTAAAAACCCTCGTAATAAACTTTTGATTCAATCCCAAAACCACTCTGTTCTTCTCCAATGGCGCAACGGTCACATGTACCGGCGTTTGGGAACTGGGAAAGTGAAGGGAATGTTCCATACACAGTGTACTTCGACAAGGCGAGAAAGGGGAAAGGGGGCGGGCCGATGAGAAACCCAAACGATCCCGAGGAATATCCAGAACTGTTCGGTAATAGTACTGAAGAAGCTCCTCGCCCCAAAACTAAAAGTGACACTCCTGTTCCGGCCATTGATCCTTTGATCCACGCCCGGAAACACAGCCGCGACTACGCCAACTCTCCCGCCCACCGCGAGAACCCCGCTCGCTCCGATGGCAACCGCGGCAAGACCAAAGTGAAGCAGTCTCAGCGTGACGACGAACCTGCGGAAGGGACGGCGGTGCCGAAATTCGGGTCGTGGGATGTGAACAATCCGGCGTCGGCGGATGGGTTTACGCACATTTTTGGTAAAGTTCGTGAAGAAAAGATTGGACCCCCAACCCCCCAGCACCCACGTACTTCTGGTTCACCTTATAACAACAATGTTCATAACCAAAAACCCCAAGACAATGCCAAGGGATGCTGCTGCTTTCCATGGCTAAGAAAATAAATTTGAATTTAATGAATGAAAATTCAAATATCCTCTCCTCTCTTCCCCAATCTGCATCCACCAAAGGATTTTACTGTGCATAGTGGGCTCTGTTTATGGACTGTGTGCTGTTTTTTTTGTATTTATATTTATATACATAAAATTTATTTTTTCCCCTAGTGGGAGATATTTGTATTGGTTAGATCCACATTTATCTCCTTTTTTGGCTTATTATTCTGCAATATTTTCATTACTTTTCAAATTTTGATTATTTGGTTAATTTCCATACACTTCTTTTTTCAACTTATTGGTAAAATGGTATAGATGGATGGAAAATATAAGTAGAGTTCTCATGGCCTTTGAAAGGATGAAATATATTTTTACAGTTAAGAACCA

Coding sequence (CDS)

ATGGCGCAACGGTCACATGTACCGGCGTTTGGGAACTGGGAAAGTGAAGGGAATGTTCCATACACAGTGTACTTCGACAAGGCGAGAAAGGGGAAAGGGGGCGGGCCGATGAGAAACCCAAACGATCCCGAGGAATATCCAGAACTGTTCGGTAATAGTACTGAAGAAGCTCCTCGCCCCAAAACTAAAAGTGACACTCCTGTTCCGGCCATTGATCCTTTGATCCACGCCCGGAAACACAGCCGCGACTACGCCAACTCTCCCGCCCACCGCGAGAACCCCGCTCGCTCCGATGGCAACCGCGGCAAGACCAAAGTGAAGCAGTCTCAGCGTGACGACGAACCTGCGGAAGGGACGGCGGTGCCGAAATTCGGGTCGTGGGATGTGAACAATCCGGCGTCGGCGGATGGGTTTACGCACATTTTTGGTAAAGTTCGTGAAGAAAAGATTGGACCCCCAACCCCCCAGCACCCACGTACTTCTGGTTCACCTTATAACAACAATGTTCATAACCAAAAACCCCAAGACAATGCCAAGGGATGCTGCTGCTTTCCATGGCTAAGAAAATAA

Protein sequence

MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRPKTKSDTPVPAIDPLIHARKHSRDYANSPAHRENPARSDGNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKVREEKIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK

Homology

[Close]

BLAST of Sed0008860 vs. NCBI nr
Match: XP_023513939.1 (RPM1-interacting protein 4 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.8 bits (639), Expect = 9.7e-63
Identity = 130/224 (58.04%), Postives = 151/224 (67.41%), Query Frame = 0


Query: 1   MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRP 60
           MAQRSHVPAFGNWESEGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F  + E  P+ 
Sbjct: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMF--AAENTPK- 60

Query: 61  KTKSDTPVPAIDPLIHARKHSRDYANSPAHRENPARSD---------------------- 120
             K D+P PA  P+ H R+ SR+Y +SPAHRENP+R                        
Sbjct: 61  --KDDSPAPAPIPMTHERRQSREYGSSPAHRENPSRKQSGTEYSIDRSPLHRQAKPSGRE 120

Query: 121 -------------GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKV 180
                        GNRGK++ K  Q     AEGTAVPKFGSWDVNNPASADGFTHIFG+V
Sbjct: 121 SPMVENKGSDGGYGNRGKSRTKPLQ-----AEGTAVPKFGSWDVNNPASADGFTHIFGEV 180

Query: 181 REEKIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           R+EK+GP TP     S SPY NN++N K  ++AKGCCCFPWL K
Sbjct: 181 RKEKLGPGTPPRQPHSSSPY-NNLNNPKADNSAKGCCCFPWLSK 213

[Close]

BLAST of Sed0008860 vs. NCBI nr
Match: XP_022960207.1 (RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata] >XP_022960208.1 RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 247.7 bits (631), Expect = 8.2e-62
Identity = 129/224 (57.59%), Postives = 149/224 (66.52%), Query Frame = 0


Query: 1   MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRP 60
           MAQRSHVPAFGNWESEGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F  + +  P+ 
Sbjct: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMF--AADNTPK- 60

Query: 61  KTKSDTPVPAIDPLIHARKHSRDYANSPAHRENPARSD---------------------- 120
             K D+P PA  P  H R+ SR+Y +SPAHRENP+R                        
Sbjct: 61  --KDDSPAPAPIPTTHERRQSREYGSSPAHRENPSRKQSGTEYSIDRSPLHRQAKPSGRE 120

Query: 121 -------------GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKV 180
                        GNRGK++ K  Q     AEGTAVPKFGSWDVNNPASADGFTHIFG+V
Sbjct: 121 SPMVENKGSDGGYGNRGKSRTKPLQ-----AEGTAVPKFGSWDVNNPASADGFTHIFGEV 180

Query: 181 REEKIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           R+EK+GP TP     S SPY NN+ N K  ++AKGCCCFPWL K
Sbjct: 181 RKEKLGPGTPPRQPHSSSPY-NNLKNPKADNSAKGCCCFPWLSK 213

[Close]

BLAST of Sed0008860 vs. NCBI nr
Match: XP_023513940.1 (RPM1-interacting protein 4 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.0 bits (624), Expect = 5.3e-61
Identity = 127/221 (57.47%), Postives = 148/221 (66.97%), Query Frame = 0


Query: 4   RSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRPKTK 63
           RSHVPAFGNWESEGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F  + E  P+   K
Sbjct: 3   RSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMF--AAENTPK---K 62

Query: 64  SDTPVPAIDPLIHARKHSRDYANSPAHRENPARSD------------------------- 123
            D+P PA  P+ H R+ SR+Y +SPAHRENP+R                           
Sbjct: 63  DDSPAPAPIPMTHERRQSREYGSSPAHRENPSRKQSGTEYSIDRSPLHRQAKPSGRESPM 122

Query: 124 ----------GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKVREE 183
                     GNRGK++ K  Q     AEGTAVPKFGSWDVNNPASADGFTHIFG+VR+E
Sbjct: 123 VENKGSDGGYGNRGKSRTKPLQ-----AEGTAVPKFGSWDVNNPASADGFTHIFGEVRKE 182

Query: 184 KIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           K+GP TP     S SPY NN++N K  ++AKGCCCFPWL K
Sbjct: 183 KLGPGTPPRQPHSSSPY-NNLNNPKADNSAKGCCCFPWLSK 212

[Close]

BLAST of Sed0008860 vs. NCBI nr
Match: XP_022960209.1 (RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 241.9 bits (616), Expect = 4.5e-60
Identity = 126/221 (57.01%), Postives = 146/221 (66.06%), Query Frame = 0


Query: 4   RSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRPKTK 63
           RSHVPAFGNWESEGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F  + +  P+   K
Sbjct: 3   RSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMF--AADNTPK---K 62

Query: 64  SDTPVPAIDPLIHARKHSRDYANSPAHRENPARSD------------------------- 123
            D+P PA  P  H R+ SR+Y +SPAHRENP+R                           
Sbjct: 63  DDSPAPAPIPTTHERRQSREYGSSPAHRENPSRKQSGTEYSIDRSPLHRQAKPSGRESPM 122

Query: 124 ----------GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKVREE 183
                     GNRGK++ K  Q     AEGTAVPKFGSWDVNNPASADGFTHIFG+VR+E
Sbjct: 123 VENKGSDGGYGNRGKSRTKPLQ-----AEGTAVPKFGSWDVNNPASADGFTHIFGEVRKE 182

Query: 184 KIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           K+GP TP     S SPY NN+ N K  ++AKGCCCFPWL K
Sbjct: 183 KLGPGTPPRQPHSSSPY-NNLKNPKADNSAKGCCCFPWLSK 212

[Close]

BLAST of Sed0008860 vs. NCBI nr
Match: XP_023004805.1 (RPM1-interacting protein 4-like isoform X1 [Cucurbita maxima] >XP_023004806.1 RPM1-interacting protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 240.7 bits (613), Expect = 1.0e-59
Identity = 129/224 (57.59%), Postives = 149/224 (66.52%), Query Frame = 0


Query: 1   MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRP 60
           MAQR HVPAFGNWESEGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F  + +  P+ 
Sbjct: 1   MAQRPHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMF--AADNTPK- 60

Query: 61  KTKSDTPVPAIDPLIHARKHSRDYANSPAHRENPAR------------------------ 120
             K D+P PA  P  H R+ SR+Y +SPAHRENP+R                        
Sbjct: 61  --KDDSPAPAPIPTTHERRQSREYGSSPAHRENPSRRQSGTEYSIDRSPLHRQAKPSGRE 120

Query: 121 --------SD---GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKV 180
                   SD   GNRGK++ K  Q     AEGTAVPKFGSWDVNNPASADGFTHIFG+V
Sbjct: 121 SPMVENKGSDGGYGNRGKSRTKPLQ-----AEGTAVPKFGSWDVNNPASADGFTHIFGEV 180

Query: 181 REEKIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           R+EK+GP TP     S SPY NN+ N K  ++AKGC CFPWL K
Sbjct: 181 RKEKLGPGTPPRQPHSSSPY-NNLKNPKADNSAKGCRCFPWLSK 213

[Close]

BLAST of Sed0008860 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26
Identity = 79/213 (37.09%), Postives = 104/213 (48.83%), Query Frame = 0


Query: 4   RSHVPAFGNWESEGNVPYTVYFDKARKGKG-GGPMRNPNDPEEYPELFGNSTEEAPRPKT 63
           RS+VP FGNWE+E NVPYT YFDKARK +  G  + NPND    PE   +S  +AP    
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPND----PEYNSDSQSQAPPHPP 62

Query: 64  KSDTPVPAIDPLIHARKHSRD--------------YANSPAHRENPARSDGN-------- 123
            S T    +D +  +R+H R                +N  A++     S  N        
Sbjct: 63  SSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPL 122

Query: 124 -------RGKTKVKQS--QRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKVREEKIG 183
                   GK++ K +  + D+ P + T VPKFG WD NNP+SADG+THIF KVREE+  
Sbjct: 123 HKNSYDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREER-- 182

Query: 184 PPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCF 185
                    SGS       + +  +N   CCCF
Sbjct: 183 ---SSGANVSGSSRTPTHQSSRNPNNTSSCCCF 206

[Close]

BLAST of Sed0008860 vs. ExPASy Swiss-Prot
Match: Q8S3M3 (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 8.3e-09
Identity = 37/86 (43.02%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 1  MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKG-GGPMRNPNDPEEYPELFGNST---EE 60
          MAQ +HVP FGNW+ E N+ YT YF+   + KG G  + NPNDPEE P+ F   T   + 
Sbjct: 1  MAQPAHVPKFGNWDGE-NISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDH 60

Query: 61 APRPKTKSDTPVPAIDPLIHARKHSR 83
              K  +DT         H RKH R
Sbjct: 61 QHSEKHHNDTSTDYHVVKQHRRKHHR 85

[Close]

BLAST of Sed0008860 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 30/68 (44.12%), Postives = 37/68 (54.41%), Query Frame = 0


Query: 117 EGTAVPKFGSWDVNNPASADGFTHIFGKVREEKI--GPPTPQHPRTSGSPYNNNVHNQKP 176
           +G  +PKFG WDVN+PASA+GFT IF K R+EK   G P      + G   +      KP
Sbjct: 4   KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKP 63

Query: 177 QDNAKGCC 183
           Q     CC
Sbjct: 64  QPKKWLCC 71

[Close]

BLAST of Sed0008860 vs. ExPASy TrEMBL
Match: A0A6J1H6T4 (RPM1-interacting protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461017 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.0e-62
Identity = 129/224 (57.59%), Postives = 149/224 (66.52%), Query Frame = 0


Query: 1   MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRP 60
           MAQRSHVPAFGNWESEGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F  + +  P+ 
Sbjct: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMF--AADNTPK- 60

Query: 61  KTKSDTPVPAIDPLIHARKHSRDYANSPAHRENPARSD---------------------- 120
             K D+P PA  P  H R+ SR+Y +SPAHRENP+R                        
Sbjct: 61  --KDDSPAPAPIPTTHERRQSREYGSSPAHRENPSRKQSGTEYSIDRSPLHRQAKPSGRE 120

Query: 121 -------------GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKV 180
                        GNRGK++ K  Q     AEGTAVPKFGSWDVNNPASADGFTHIFG+V
Sbjct: 121 SPMVENKGSDGGYGNRGKSRTKPLQ-----AEGTAVPKFGSWDVNNPASADGFTHIFGEV 180

Query: 181 REEKIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           R+EK+GP TP     S SPY NN+ N K  ++AKGCCCFPWL K
Sbjct: 181 RKEKLGPGTPPRQPHSSSPY-NNLKNPKADNSAKGCCCFPWLSK 213

[Close]

BLAST of Sed0008860 vs. ExPASy TrEMBL
Match: A0A6J1HAA1 (RPM1-interacting protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461017 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.2e-60
Identity = 126/221 (57.01%), Postives = 146/221 (66.06%), Query Frame = 0


Query: 4   RSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRPKTK 63
           RSHVPAFGNWESEGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F  + +  P+   K
Sbjct: 3   RSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMF--AADNTPK---K 62

Query: 64  SDTPVPAIDPLIHARKHSRDYANSPAHRENPARSD------------------------- 123
            D+P PA  P  H R+ SR+Y +SPAHRENP+R                           
Sbjct: 63  DDSPAPAPIPTTHERRQSREYGSSPAHRENPSRKQSGTEYSIDRSPLHRQAKPSGRESPM 122

Query: 124 ----------GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKVREE 183
                     GNRGK++ K  Q     AEGTAVPKFGSWDVNNPASADGFTHIFG+VR+E
Sbjct: 123 VENKGSDGGYGNRGKSRTKPLQ-----AEGTAVPKFGSWDVNNPASADGFTHIFGEVRKE 182

Query: 184 KIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           K+GP TP     S SPY NN+ N K  ++AKGCCCFPWL K
Sbjct: 183 KLGPGTPPRQPHSSSPY-NNLKNPKADNSAKGCCCFPWLSK 212

[Close]

BLAST of Sed0008860 vs. ExPASy TrEMBL
Match: A0A6J1KVL7 (RPM1-interacting protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497996 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.8e-60
Identity = 129/224 (57.59%), Postives = 149/224 (66.52%), Query Frame = 0


Query: 1   MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRP 60
           MAQR HVPAFGNWESEGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F  + +  P+ 
Sbjct: 1   MAQRPHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMF--AADNTPK- 60

Query: 61  KTKSDTPVPAIDPLIHARKHSRDYANSPAHRENPAR------------------------ 120
             K D+P PA  P  H R+ SR+Y +SPAHRENP+R                        
Sbjct: 61  --KDDSPAPAPIPTTHERRQSREYGSSPAHRENPSRRQSGTEYSIDRSPLHRQAKPSGRE 120

Query: 121 --------SD---GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKV 180
                   SD   GNRGK++ K  Q     AEGTAVPKFGSWDVNNPASADGFTHIFG+V
Sbjct: 121 SPMVENKGSDGGYGNRGKSRTKPLQ-----AEGTAVPKFGSWDVNNPASADGFTHIFGEV 180

Query: 181 REEKIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           R+EK+GP TP     S SPY NN+ N K  ++AKGC CFPWL K
Sbjct: 181 RKEKLGPGTPPRQPHSSSPY-NNLKNPKADNSAKGCRCFPWLSK 213

[Close]

BLAST of Sed0008860 vs. ExPASy TrEMBL
Match: A0A6J1JWD7 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111488479 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.1e-59
Identity = 133/230 (57.83%), Postives = 153/230 (66.52%), Query Frame = 0


Query: 1   MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRP 60
           MAQRSHVPAFGNWE+EGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F +++ EAP  
Sbjct: 1   MAQRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPV 60

Query: 61  KTKSDTPVPAIDPLIHARKHSRD------YANSPAHRENPARSD---------------- 120
           K      +PA  P  H +K SR+      YANSP HRENP+R                  
Sbjct: 61  KPN----IPAPKPTTHEKKQSREDDGYHPYANSPGHRENPSRKQSGSEYSIDRSPLHRHA 120

Query: 121 -------------------GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFT 180
                              GNRGKT++K     D P EGTAVPKFGSWDVNNPASADGFT
Sbjct: 121 KPSGRESPVVEGKGFDGGHGNRGKTRMK----PDAP-EGTAVPKFGSWDVNNPASADGFT 180

Query: 181 HIFGKVREEKIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           HIFGKVREEK+GP TP  P +S SPY NNVHN++P D+AKG  CFP LR+
Sbjct: 181 HIFGKVREEKMGPGTPPPPHSS-SPY-NNVHNRRPDDSAKG-GCFPCLRR 218

[Close]

BLAST of Sed0008860 vs. ExPASy TrEMBL
Match: A0A6J1GP44 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455855 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.1e-59
Identity = 133/230 (57.83%), Postives = 153/230 (66.52%), Query Frame = 0


Query: 1   MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRP 60
           MAQRSHVPAFGNWE+EGNVPYTV+FDKARKG+GGGP+RNPNDPEEYPE+F +++ EAP  
Sbjct: 1   MAQRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPV 60

Query: 61  KTKSDTPVPAIDPLIHARKHSRD------YANSPAHRENPARSD---------------- 120
           K      +PA  P  H +K SR+      YANSP HRENP+R                  
Sbjct: 61  KPN----IPAPKPTTHEKKQSREDDGYHPYANSPGHRENPSRKQSGSEYSIDRSPLHRHA 120

Query: 121 -------------------GNRGKTKVKQSQRDDEPAEGTAVPKFGSWDVNNPASADGFT 180
                              GNRGKT++K     D P EGTAVPKFGSWDVNNPASADGFT
Sbjct: 121 KPSGRESPVVEGKGFDGGHGNRGKTRMK----PDAP-EGTAVPKFGSWDVNNPASADGFT 180

Query: 181 HIFGKVREEKIGPPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCFPWLRK 190
           HIFGKVREEK+GP TP  P +S SPY NNVHN++P D+AKG  CFP LR+
Sbjct: 181 HIFGKVREEKMGPGTPPPPHSS-SPY-NNVHNRRPDDSAKG-GCFPCLRR 218

[Close]

BLAST of Sed0008860 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27
Identity = 79/213 (37.09%), Postives = 104/213 (48.83%), Query Frame = 0


Query: 4   RSHVPAFGNWESEGNVPYTVYFDKARKGKG-GGPMRNPNDPEEYPELFGNSTEEAPRPKT 63
           RS+VP FGNWE+E NVPYT YFDKARK +  G  + NPND    PE   +S  +AP    
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPND----PEYNSDSQSQAPPHPP 62

Query: 64  KSDTPVPAIDPLIHARKHSRD--------------YANSPAHRENPARSDGN-------- 123
            S T    +D +  +R+H R                +N  A++     S  N        
Sbjct: 63  SSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPL 122

Query: 124 -------RGKTKVKQS--QRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKVREEKIG 183
                   GK++ K +  + D+ P + T VPKFG WD NNP+SADG+THIF KVREE+  
Sbjct: 123 HKNSYDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREER-- 182

Query: 184 PPTPQHPRTSGSPYNNNVHNQKPQDNAKGCCCF 185
                    SGS       + +  +N   CCCF
Sbjct: 183 ---SSGANVSGSSRTPTHQSSRNPNNTSSCCCF 206

[Close]

BLAST of Sed0008860 vs. TAIR 10
Match: AT5G48657.2 (defense protein-related )

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-10
Identity = 67/231 (29.00%), Postives = 94/231 (40.69%), Query Frame = 0


Query: 1   MAQRSHVPAFGNWESEGNVPYTVYFDKARKGKGGGPMRNPNDPEEYPELFGNSTEEAPRP 60
           MA R HVP FG+W  +   P+TV F+KA K K    + NPN   EYP++  N+ +     
Sbjct: 1   MANRPHVPKFGDWTED--APFTVVFEKASKSKKNMNVANPN---EYPDMNPNAAQNRNMS 60

Query: 61  KTKSDTPVPAIDPLIHARKHSRD---YANSPAHRE---------------------NPAR 120
           +     P   + P  H R +SRD   +  SPAH E                        R
Sbjct: 61  RPDQQPPNHNVRPR-HERFNSRDETEFRPSPAHNERNNRVRSVPPTPETYNHQTYGGGGR 120

Query: 121 SDGNRGKTKVKQSQRDDEPAEG------------TAVPKFGSWDVNNPASADGFTHIFGK 180
           S GN  +   +QS RD  PA                +P F     N       +T IF K
Sbjct: 121 SMGNPTEINRRQS-RDHVPARPIRNLRGQSSERVATIPPFPGTGSN--MENQSYTLIFDK 180

Query: 181 VREEKIGPPTPQHPRTSGSPYNN------NVHNQKPQDNAKGCCCFPWLRK 190
           V+E++      Q    +G+ ++       + H+Q    + KGCC  PW RK
Sbjct: 181 VKEDR-----NQARSYNGTDHSTPTRPIIDQHHQPLPSSPKGCCFPPWSRK 217

[Close]

BLAST of Sed0008860 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.8e-09
Identity = 34/74 (45.95%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 117 EGTAVPKFGSWDVNNPASADGFTHIFGKVREEK-------IGPPTPQHP-RTSGSPYNNN 176
           +G  +PKFG WDVNNPASA+GFT IF K  +EK        GP +   P R   S  NNN
Sbjct: 5   KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNNN 64

Query: 177 VHNQKPQDNAKGCC 183
             +Q P+   K  C
Sbjct: 65  HSSQNPKAKNKWFC 78

[Close]

BLAST of Sed0008860 vs. TAIR 10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.2e-08
Identity = 33/78 (42.31%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 107 KQSQRDDEPAEGTAVPKFGSWDVNNPASADGFTHIFGKVREEKIGPPTPQHPRTSGSPYN 166
           +Q Q+ D P     +PKFG WDVN+PASA+GFT IF K R++K    T    R +    +
Sbjct: 6   QQRQQQDRP-----LPKFGEWDVNDPASAEGFTVIFAKARDDK---KTNASGRAASQRRD 65

Query: 167 NNVHNQKPQDNAKGCCCF 185
           NN    +P    K  CCF
Sbjct: 66  NNKSQDEP--TKKRFCCF 73

[Close]

BLAST of Sed0008860 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 55.1 bits (131), Expect = 7.2e-08
Identity = 26/52 (50.00%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 117 EGTAVPKFGSWDVNNPASADGFTHIFGKVREEKIGPPTPQHPRTSGSPYNNN 169
           +G  +PKFG WDVN+P+SA+GFT IF K R EK G      P      YN N
Sbjct: 4   KGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKN 55

The following BLAST results are available for this feature:

BLAST of Sed0008860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513939.1	9.7e-63	58.04	RPM1-interacting protein 4 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022960207.1	8.2e-62	57.59	RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata] >XP_022960208.1 ...	[more]
XP_023513940.1	5.3e-61	57.47	RPM1-interacting protein 4 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022960209.1	4.5e-60	57.01	RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata]	[more]
XP_023004805.1	1.0e-59	57.59	RPM1-interacting protein 4-like isoform X1 [Cucurbita maxima] >XP_023004806.1 RP...	[more]

BLAST of Sed0008860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYN5	3.4e-26	37.09	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
Q8S3M3	8.3e-09	43.02	NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1	[more]
O22633	1.0e-06	44.12	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]

BLAST of Sed0008860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6T4	4.0e-62	57.59	RPM1-interacting protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HAA1	2.2e-60	57.01	RPM1-interacting protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KVL7	4.8e-60	57.59	RPM1-interacting protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1JWD7	4.1e-59	57.83	RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111488479 PE=4...	[more]
A0A6J1GP44	4.1e-59	57.83	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455855 PE...	[more]

BLAST of Sed0008860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25070.1	2.4e-27	37.09	RPM1 interacting protein 4	[more]
AT5G48657.2	2.0e-10	29.00	defense protein-related	[more]
AT5G63270.1	3.8e-09	45.95	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	4.2e-08	42.31	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	7.2e-08	50.00	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 115..149 e-value: 3.4E-20 score: 71.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..175
None	No IPR available	PANTHER	PTHR33159:SF6	RPM1-INTERACTING PROTEIN 4	coord: 1..98
None	No IPR available	PANTHER	PTHR33159:SF6	RPM1-INTERACTING PROTEIN 4	coord: 101..185
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 101..185 coord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008860.1	Sed0008860.1	mRNA