Sed0008848 (gene) Chayote v1

Overview


Name	Sed0008848
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribose-5-phosphate isomerase
Location	LG08: 39624540 .. 39630130 (-)
RNA-Seq Expression	Sed0008848
Synteny	Sed0008848

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTTTTATTATAATTAAAAATCCCAAAATTTATTATATCAGTTTGTGTAATTGAAGCTGTACCTGTATCGGCCTTATCCACACCATTGGTAGCAGTGGCAGAGAAAACGAATGGGAGTGGCGATGGCTGCTTCGCTTTCAACTTCTCCCTACAAATACTCCAAATCCACACTTCTGCGCAAGCGAAGCCCTAACTTCAACCTCCCAACAATTCGCTTCAGAATCTCCGCCTCAACCTCCGTTCTCGCCGGCGGATCTCCTCTTCTTCAAGCGGCCAAGCACACTGTATGATTCTCATCTAACCATGCCTTTTTTCCGGTACTGTTTCAATCAATGTCTGATCTGATACGCCATTGCGTTCTCGTGTTTCACTCGTTCTCGTTAACAAATGCATGAGCTCTCTGTTTTATGGCATATTCATGTAATGTGATTCTAAAACGAATACCGTTCGAAGTATCCTGGTGCCACAGTCTAGGGACAGACCACTGGTGCCTCGGGTATAGGGGAGCGAAGCTCCGATTTTCCGGTTTTTAAAAAAACGAATTTTTGTGTAGAACTGACAATAGGTTGTTGCGAGAATAGTCGAGGTTGAGGTGCACATAGAGATGTCTATTTTCCTCGCGGGGGCGGGGAACGGGAAAAAATTCCCCGTGGGCTAATCGGGACTGGGGACGGGTCCCCGATCCCCGCCCCGTTTATTTATTTATTTTTAAAAATATTTTTTCTATACTTTACCCCCTTTCATTTTCAAATGAAAACATATTTGTTGATAAAATTATCTATGCATATGAGTATTTTTCTTTAATAATTAATATTATAGTTGAAATTTATAAGTATTTTCTAAGAAAATCTAATTATTTAAAAGTATCATCCAAAAAATATAAAAAAAATTGAAAAATCCTTGTGGGACCCGATCTCCGAAAAAAACGTTTCCGAGGGGATGGGGATTAAATTAAGTGGCGCGGCCAAGGGCGGGGAAGCCATTTGCCGGCCCCGCCCCGCCCTGTGGACATCTCTAGGTGCACGTAAGTTGGCACACACTCGTAGATATTAAATAAAAATTGCAAGCTGTTAAAAGATATTGGTTTAGGGTTTAGGGTGAACAAGTGTTGGGCATTGGAAGCTCTCTATGGATGAATGAGAATTGGGGCCTGAGTTTGTATGAGTTGACAGAAAAGCTGTGCATTACTCTTCATTTACCTTGGTGAAATCTGGCTGAAAGAGGGACTTCTGGTTGAGAAAGGGGCAAAACATGAGATTGAGAAGTCTTAAAAGGGTATCAGGGGAATGGTTGATAGGGATGGTCCAAATTGGAAGATTTTGAGGAATTGGTAATTTTTGCTTTTGCTTTTGTGATCGTTTGATGATTTGGTCTCTATGTGAACGAATTTTGAAAATGCTTTTGTTAATTTGGGGGTATATTCTGAAGGAAAATGACCGCCGTGAGTCTTTGTAATACTAGGTGGACGCGTACGTAAAACGTGGAATGGTTATTGGCTTGGGGTCTGGTCAAGCTTCGGGCATGGCTATTGAGTATCTTGGTCGGCTGCTTCGAACAGGTGCTTTGAAAGATATAGTAGGGATACCCATGTGAGTTACTATCCACTGAATTCATTGATGAAGTCTGTTACTTTCTGGTTGGCTTCATCCTTTTTCTAATTTCAATCCAAACTCCACTGAAACAATTGGCAGTTTGTTATCCTATTCTTCTTTCTTATTGGCACTGGATAGGATTGATGTGAAAGAAACATTTTTGGAAATAATTAAAATATTCTTCACAAGTTCCTATACCTGTTTTGTATTTTAAGTTCTACTTCTACCCTTAGAATTATAGAATTAATGGAGATTTGCATTGAATATCTCCTGAAGCCAATGGAGTTGTTATGCCAAAAGTAAAATTGATATTTTTTTCACCAACTTCCAACTATATGGCTGTTATTAAATGTATGCAGTCCTATTTTACTTTGAGGTTTTGAATGCTGACCATGTCTCCATATTCACCCGTTGAACGCTTATGACTTGTTGAAGATATTTGTGAACGAAAAAAAATGACTTTCATAATAATTGTAAATTATATTTGTCTCCGAGGGGTGGCGCTTTGAAGGTGTGCTCCCCTCAAGGTCCCAGATTCGAGACTCAACTGTGACATTAATTTGTAGACACCTCCCGTATCTCTATTCCTTTGATGTCTCTTGGTACTTGGCCAAGGGACGAGTGTGGTTACTCCGGGTATATCCGGGTATATTGGAGCAAAGCTCCCATTTTCCATGTTCCAAAAAAAAAGTTGTAAAATTATATTTATGATTTAAAAATGAGTGACTTACCTCCTATGTACTTTCATTTTCTAACGCACTATGTCAATATTTGTGAAAGACAAAATGATTTCTATGTACCTTTCATTCTTAACGCACCGTGTCAGTTTCTTTGGCTTGATGCAGGTCCATAACAAGTGCTAGTGAAGCTGCTAAGGCAGGAATTCCACTAGACCAGTTCAATGATAGTTCTCAAGTGAGCTAAACATTTAATTCTTAATTCGTTGAGCTTTTTATTGGAGTACATTTTTAGTTGAAAGTCTCCTCATGTTTGTTTGATGTTTCTTTGTTATTGGGGTGCATTAATGAATTGGAATAGATTGCAGAATTTATGTGGCCTCCCAAGTTACAAGAAACTCAGATAACGAACCGGAGATTCCTAATAGATTGCAGTGCTTATGTGGTCTCCTATGTTTCTCATAAGAACTTGGACACCTTTTTATCATAAAAAAAAATTCGGATACATCGTTGATAAAATTAGTAACTGCTATCAACTCAGACTGAGGATATAATAAAGCAATGAAGAATTACGGAATTCCTATGAATGAAAAGTTTTGTTTCATTATAAGTAAAAGTTTTTGGGCATTAAAGGTAAAACGTTCATTTTTTATTCTGAGCATTCTTTGTCTAAAAACTTAAAAAGTGGTATTTTTCAATTATTTATTTATTTATTTGAAATTTATAACTAGTATTTTTTATGTTAAACCTCAGTCAAGTAAACAATAAGTTTGTACTTTTGTAGATTGATTTTTCATTTGATGATGCTGATATCATGGAAGAAGGAACACTTATTGCTGTCATTGGACATAGGAAAGGGCAAGTGGAAGATTCAATAATCCAAGAGAAGGTGAATAGAATCTTGTGTCCTACCATTTTCAATAGCTCCTAAATCAATGCTTATGATTTTCAATCTATATCAGGGAAAAGATCTTGAAGTCTGGTTGGTTGTATCGTTTGTATTTATCAGAAACAAATTTGGTTTTGAATGTACAAAACAGCAATTTGGTGTCAATATCATTTGAGGACTTAACCTTCAAGACCTAGAATATATTTATATAATTGTTGTGTCAAATGTTCATTTCTTGTCTTTCATTTATTTGCAGTCTATATTAAATGCCTCCAACCAGCTTGCATTCATGATAAAAGAAAGCCAATATATGGGTGGCCCTGAGGGTTCGATTCCAGTTCTAGTGAATTCTGTGAGAAGATATCAATATCATCTATAACATGTCTTATATATGATATAAACTAACAGATAGCTTATGAAGGAACACTGAAATTTATTTTCAGCTTAATTGGATGCAAACTGCAGAAGAAATTGACGATCTCTTTTTAGGCGATGCAGAGGTAAGCTATTTACCGACGCCTATCTCCTTATTGTCGAACTTTACATGCTACTTTTCATATGCTTGATTTTATTATCATTTAGCTATGTAAAGTCAATAAGAACAATAGCTTAACCGACATAAGTGTATATTCATCGATCAAGATGTCATGGGTTCGAATTCCTCAACTATGAAAGCCAAACTCATTAGTTTGACCTGCTTATAAATTAATTACAGTTTTATGTCCCGCATGCTCATTATAGTTTTTTCTTTTTTAGGAATGCTTTATTAATGAATGTAAGTTATGACAAAGATGATCTAGTTTTATAACTTTTTACATAAGGCAAAATTCAAGCTTAAAAGAAACAAGAATTCAAAAAATGGCCTGGGTTAACCGCAGATCTAGCACAGGAATATAAAATTTTAATTCCTTCTTATTTTTCTCTCTATTTTGAATAACTTTTTGTGAATCTTTACATTGCATATACTATTTAACTATGTTCAACATGTGGAAATAGTGGTTGTTTGCTTTTCTCTGTCAATAACTATGATGTTCCCTGGTGAAAGATGTCAATCATAAACATGCCTTCAATATGAAATGGCAACCTTAGGTTTCTAACAATCATTATTTAGCGAGGGAAAGAAATAAAGAAAATATTAATTTAGTTATTTTAATAGTACTGTCAGATTATTTACGCTTTGCCATAATATCAAATTTTCCTTTTTGTGATTATAGTCTCACACTACTTTATTTGTGCAGTCAAGATATTTCTTGTAATTAATTTCGATAAACCTTATGAAACTATTTCATAAATGAATGAAATTTTTTGTTCCTATAAAGAAAACATCGAAATTTTCATGTTAAGGTATGGAGGAGGCCATCAATAGGGCATGCAGGTCCCCATGGGGGCGACTTTCCACTGATCACTAGAGAAGGCCATAACGTTCTGGATGTCATATTCACATCTCCTATATCAAGCCTAGGTGTGATAATTTTTTTCTCGCTTCTACTTTCATCCCTTCATAGATGACATGAATTACTTTTTTAAGACATGAAATACATTTGCAGTTGAAGTAGCAGAAAGTCTCGATCAGATCGATGGAGTTGTAGATCATGGAGTCATTTCTAAGTTACCGTCAGTATTTCTCAATTGCTTCCTTTTTTTGTTTTTGCTAAAATGACGTTCTTTCTTGGTCCTACACATTGGATACATGTCTGCATACTCTTACCCCCATTTTCAGAACTATCCTTCCTTCAACTTCAAGTTCAATATATCTCTTTCGTCTAATAGATCTTGCTTGGCATGTTGATGCTCTCCTAGAAAAAGTGAGGTGACTACTAGCGATAAGATAAGATTAGATAGACTACATTCATTGGAAATTGGTTTTGAGATGGAATCTCATACTATCTTGTGGGTTCAATCCATGGTGGTCACCTACCTAGGAATTAATTTCCTACAGGTTTCCTTGACATCCAAATGTTATAGGGTCGGACGGTCTGTCATGTGGCATTAATCGAGGTGCGTGCAAGCTGGTCCGGACAGTCACGGATATAAAAAAAAAACTGGATTTAAGTTATCATAAGTTGAATTTTTCCTTATACTTTCCCGTGTGTTACAGTTGCACAGCAGTTATTGCATCAGAATCTGGGCTGCAAATTGTCGATAATCTGCAGAGGAATATGGCATAGAGTGATTGCAGTGTACAGATCATCAATGCCATCACAGGTAACTCTGCAAGTCGTGGATGTCCCAACTTAATTTTTTTGGAAATTATTATGTAAACCATAACAAGAGCTACATAAAATCCTTTCCTACTGTTGATATTAATTGAATCTTGGGTTTTAGATGACGTTAAAAGCATTCAATTTTACGTCATACTAGATCTGTAATATACTCATCCAGAACAATTTATATATCTCATCAACCAATATGGCTATGCATGAAACTGC

mRNA sequence

AAAATTTTTTATTATAATTAAAAATCCCAAAATTTATTATATCAGTTTGTGTAATTGAAGCTGTACCTGTATCGGCCTTATCCACACCATTGGTAGCAGTGGCAGAGAAAACGAATGGGAGTGGCGATGGCTGCTTCGCTTTCAACTTCTCCCTACAAATACTCCAAATCCACACTTCTGCGCAAGCGAAGCCCTAACTTCAACCTCCCAACAATTCGCTTCAGAATCTCCGCCTCAACCTCCGTTCTCGCCGGCGGATCTCCTCTTCTTCAAGCGGCCAAGCACACTGTGGACGCGTACGTAAAACGTGGAATGGTTATTGGCTTGGGGTCTGGTCAAGCTTCGGGCATGGCTATTGAGTATCTTGGTCGGCTGCTTCGAACAGGTGCTTTGAAAGATATAGTAGGGATACCCATGTCCATAACAAGTGCTAGTGAAGCTGCTAAGGCAGGAATTCCACTAGACCAGTTCAATGATAGTTCTCAAATTGATTTTTCATTTGATGATGCTGATATCATGGAAGAAGGAACACTTATTGCTGTCATTGGACATAGGAAAGGGCAAGTGGAAGATTCAATAATCCAAGAGAAGTCTATATTAAATGCCTCCAACCAGCTTGCATTCATGATAAAAGAAAGCCAATATATGGGTGGCCCTGAGGGTTCGATTCCAGTTCTAGTGAATTCTCTTAATTGGATGCAAACTGCAGAAGAAATTGACGATCTCTTTTTAGGCGATGCAGAGGTATGGAGGAGGCCATCAATAGGGCATGCAGGTCCCCATGGGGGCGACTTTCCACTGATCACTAGAGAAGGCCATAACGTTCTGGATGTCATATTCACATCTCCTATATCAAGCCTAGTTGAAGTAGCAGAAAGTCTCGATCAGATCGATGGAGTTGTAGATCATGGAGTCATTTCTAAGTTACCTTGCACAGCAGTTATTGCATCAGAATCTGGGCTGCAAATTGTCGATAATCTGCAGAGGAATATGGCATAGAGTGATTGCAGTGTACAGATCATCAATGCCATCACAGGTAACTCTGCAAGTCGTGGATGTCCCAACTTAATTTTTTTGGAAATTATTATGTAAACCATAACAAGAGCTACATAAAATCCTTTCCTACTGTTGATATTAATTGAATCTTGGGTTTTAGATGACGTTAAAAGCATTCAATTTTACGTCATACTAGATCTGTAATATACTCATCCAGAACAATTTATATATCTCATCAACCAATATGGCTATGCATGAAACTGC

Coding sequence (CDS)

ATGGGAGTGGCGATGGCTGCTTCGCTTTCAACTTCTCCCTACAAATACTCCAAATCCACACTTCTGCGCAAGCGAAGCCCTAACTTCAACCTCCCAACAATTCGCTTCAGAATCTCCGCCTCAACCTCCGTTCTCGCCGGCGGATCTCCTCTTCTTCAAGCGGCCAAGCACACTGTGGACGCGTACGTAAAACGTGGAATGGTTATTGGCTTGGGGTCTGGTCAAGCTTCGGGCATGGCTATTGAGTATCTTGGTCGGCTGCTTCGAACAGGTGCTTTGAAAGATATAGTAGGGATACCCATGTCCATAACAAGTGCTAGTGAAGCTGCTAAGGCAGGAATTCCACTAGACCAGTTCAATGATAGTTCTCAAATTGATTTTTCATTTGATGATGCTGATATCATGGAAGAAGGAACACTTATTGCTGTCATTGGACATAGGAAAGGGCAAGTGGAAGATTCAATAATCCAAGAGAAGTCTATATTAAATGCCTCCAACCAGCTTGCATTCATGATAAAAGAAAGCCAATATATGGGTGGCCCTGAGGGTTCGATTCCAGTTCTAGTGAATTCTCTTAATTGGATGCAAACTGCAGAAGAAATTGACGATCTCTTTTTAGGCGATGCAGAGGTATGGAGGAGGCCATCAATAGGGCATGCAGGTCCCCATGGGGGCGACTTTCCACTGATCACTAGAGAAGGCCATAACGTTCTGGATGTCATATTCACATCTCCTATATCAAGCCTAGTTGAAGTAGCAGAAAGTCTCGATCAGATCGATGGAGTTGTAGATCATGGAGTCATTTCTAAGTTACCTTGCACAGCAGTTATTGCATCAGAATCTGGGCTGCAAATTGTCGATAATCTGCAGAGGAATATGGCATAG

Protein sequence

MGVAMAASLSTSPYKYSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTVDAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQFNDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMGGPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLDVIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNMA

Homology

[Close]

BLAST of Sed0008848 vs. NCBI nr
Match: XP_038895363.1 (probable ribose-5-phosphate isomerase 4, chloroplastic [Benincasa hispida] >XP_038895364.1 probable ribose-5-phosphate isomerase 4, chloroplastic [Benincasa hispida] >XP_038895366.1 probable ribose-5-phosphate isomerase 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 508.8 bits (1309), Expect = 3.1e-140
Identity = 267/295 (90.51%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M V MAASLSTSPY   SKS  LRK SP   L   RF ISASTSVLAGGSPLLQAAKHTV
Sbjct: 1   MRVGMAASLSTSPYTCSSKSITLRKCSPKIKLGRNRFIISASTSVLAGGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           DAYVK GMVIGLGSGQASGMAI+YLGRLLRTGALKDIVG+PMSI SASEAAKAGIPLDQF
Sbjct: 61  DAYVKSGMVIGLGSGQASGMAIQYLGRLLRTGALKDIVGVPMSIASASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADI+EEGTLIAVIGHRK QVEDSIIQEKSI+NASNQLAFMIKESQYMG
Sbjct: 121 NDSSQIDFSFDDADIIEEGTLIAVIGHRKPQVEDSIIQEKSIINASNQLAFMIKESQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFPL+TREGHNVLD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPLVTREGHNVLD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNMA 295
           VIFTSPISSL EVAESLDQI+GVVDHGVISK PCTAVIASESGLQI+DNLQRNMA
Sbjct: 241 VIFTSPISSLAEVAESLDQINGVVDHGVISKFPCTAVIASESGLQIIDNLQRNMA 295

[Close]

BLAST of Sed0008848 vs. NCBI nr
Match: XP_004135562.1 (probable ribose-5-phosphate isomerase 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 505.0 bits (1299), Expect = 4.4e-139
Identity = 264/295 (89.49%), Postives = 272/295 (92.20%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M V MAASLSTSPY   SKS +  K SPN  L + RF ISASTSVLAGGSPLLQAAKHTV
Sbjct: 1   MRVGMAASLSTSPYTCSSKSIVFPKCSPNIKLGSNRFTISASTSVLAGGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           D YVK GMVIGLGSGQASGMAI+YLGRLLR GALKDIVG+PMSI SASEAAKAGIPLDQF
Sbjct: 61  DTYVKSGMVIGLGSGQASGMAIQYLGRLLRAGALKDIVGVPMSIASASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADI+EEGTLIAVIGHRK QVEDSIIQEKSILNASNQLAFMIKESQYMG
Sbjct: 121 NDSSQIDFSFDDADIIEEGTLIAVIGHRKPQVEDSIIQEKSILNASNQLAFMIKESQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFP +TREGHNVLD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPFVTREGHNVLD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNMA 295
           VIFTSPISSL EVAESLDQI+GVVDHGVISK PCTAVIASESGLQI+DNLQRNMA
Sbjct: 241 VIFTSPISSLAEVAESLDQINGVVDHGVISKFPCTAVIASESGLQIIDNLQRNMA 295

[Close]

BLAST of Sed0008848 vs. NCBI nr
Match: XP_008459119.1 (PREDICTED: probable ribose-5-phosphate isomerase 4, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 504.6 bits (1298), Expect = 5.8e-139
Identity = 262/295 (88.81%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M VAMAASLS+SPY   SKS +L K SP   L T RF ISASTSVL+GGSPLLQAAKHTV
Sbjct: 1   MRVAMAASLSSSPYTCSSKSIVLSKCSPKIKLGTNRFTISASTSVLSGGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           DAYVK GMV+GLGSGQASGMAI+YLGRLLR GALKDIVG+PMSI SASEAAKAGIPLDQF
Sbjct: 61  DAYVKSGMVVGLGSGQASGMAIQYLGRLLRAGALKDIVGVPMSIASASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADI+EEGTLIAVIGHRK QVEDSIIQEKSILNASNQLAFMIKESQYMG
Sbjct: 121 NDSSQIDFSFDDADIIEEGTLIAVIGHRKPQVEDSIIQEKSILNASNQLAFMIKESQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFP +TREGHNVLD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPFVTREGHNVLD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNMA 295
           VIFTSPISSL EVAESLDQIDGVVDHGVISK PCTAVIA+ESGLQI+DN+Q+NMA
Sbjct: 241 VIFTSPISSLAEVAESLDQIDGVVDHGVISKFPCTAVIAAESGLQIIDNVQKNMA 295

[Close]

BLAST of Sed0008848 vs. NCBI nr
Match: XP_023541645.1 (probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 503.8 bits (1296), Expect = 9.8e-139
Identity = 264/294 (89.80%), Postives = 270/294 (91.84%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M V MAASLS SPY   SKS LLRK  PN  L    FRISASTSVLA GSPLLQAAKHTV
Sbjct: 1   MRVGMAASLSASPYTCSSKSVLLRKFRPNIKLRRSCFRISASTSVLADGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           DAYVK GMVIGLGSGQASGMAI YLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF
Sbjct: 61  DAYVKSGMVIGLGSGQASGMAIGYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADIMEEGTLIAVIGHRK QVEDSIIQEKSILNASNQLAFM+K+SQYMG
Sbjct: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKPQVEDSIIQEKSILNASNQLAFMVKDSQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFP +TREGHN+LD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPFVTREGHNILD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNM 294
           VIFTSPISSL  VAESL+QIDG+VDHGVISK PCTAVIASESGLQIVDNLQRNM
Sbjct: 241 VIFTSPISSLAAVAESLEQIDGIVDHGVISKFPCTAVIASESGLQIVDNLQRNM 294

[Close]

BLAST of Sed0008848 vs. NCBI nr
Match: XP_022954935.1 (probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [Cucurbita moschata] >KAG6573438.1 putative ribose-5-phosphate isomerase 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 500.7 bits (1288), Expect = 8.3e-138
Identity = 263/294 (89.46%), Postives = 269/294 (91.50%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M VAMAASLS SPY   SKS LLRK  P        FRISASTSVLA GSPLLQAAKHTV
Sbjct: 1   MRVAMAASLSASPYTCSSKSILLRKFRPKIKFRRNCFRISASTSVLADGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           DAYVK GMVIGLGSGQASGMAI YLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF
Sbjct: 61  DAYVKSGMVIGLGSGQASGMAIGYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADIMEEGTLIAVIGHRK QVEDSIIQEKSILNASNQLAFM+K+SQYMG
Sbjct: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKPQVEDSIIQEKSILNASNQLAFMVKDSQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFP +TREGHN+LD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPFVTREGHNILD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNM 294
           VIFTSPISSL  VAESL+QIDG+VDHGVISK PCTAVIASESGLQIVDNLQRNM
Sbjct: 241 VIFTSPISSLAAVAESLEQIDGIVDHGVISKFPCTAVIASESGLQIVDNLQRNM 294

[Close]

BLAST of Sed0008848 vs. ExPASy Swiss-Prot
Match: Q9FI13 (Probable ribose-5-phosphate isomerase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPI4 PE=2 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.7e-83
Identity = 163/283 (57.60%), Postives = 209/283 (73.85%), Query Frame = 0


Query: 5   MAASLSTSPYKYSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTVDAYVK 64
           M  + +++P+  S S +  +R  NF     RF + AS S     SPLL+AA HTVD YVK
Sbjct: 1   MVTATASTPFSLSSSVVFTRRR-NFK----RFPVCASLSPEV--SPLLRAAHHTVDNYVK 60

Query: 65  RGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQFNDSSQ 124
            GM+IGLGSG+AS  AI YLG+ L +G+L ++VG+PMS  SASEAAK GIPL+ + D  Q
Sbjct: 61  SGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKYGIPLEYYRDGVQ 120

Query: 125 IDFSFDDADIMEEGTLIAVIGHRK-GQVEDSIIQEKSILNASNQLAFMIKESQYMGGPEG 184
           IDF+F DAD +EE TLIAVIG R+  Q +D I+++KSI+  +++  FMIKE QY  G EG
Sbjct: 121 IDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFMIKEEQYKAGLEG 180

Query: 185 SIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLDVIFT 244
           SIPVLV SLNW+  AEEIDDL+LGDAEVWRR S+ + GP GGDFP++T +GHN+LDVIFT
Sbjct: 181 SIPVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGDFPIVTSDGHNILDVIFT 240

Query: 245 SPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIV 287
           +PI SL ++A SLD+IDGVVDHG+I K  CT VIA E+ ++ V
Sbjct: 241 TPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIAEETVVRSV 276

[Close]

BLAST of Sed0008848 vs. ExPASy Swiss-Prot
Match: Q9C998 (Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.2e-23
Identity = 76/241 (31.54%), Postives = 123/241 (51.04%), Query Frame = 0


Query: 51  LLQAAKHTVDAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAA 110
           L + A +    +V+ GMVIGLG+G  +  A+  +  LLR G LKDI+GIP S T+  +A 
Sbjct: 32  LKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTSTTTHEQAV 91

Query: 111 KAGIPLDQFNDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAF 170
             GIPL   +    +D S D AD  E    + ++  R G    S+++EK I  AS +   
Sbjct: 92  SLGIPLSDLDSHPVVDLSIDGAD--EVDPALNLVKGRGG----SLLREKMIEGASKKFVV 151

Query: 171 MIKES---QYMGGPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWR-RPSIGHAGPHGGD 230
           ++ ES   +Y+GG   ++PV V       T  ++++LF     V + R  IG  G     
Sbjct: 152 IVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNGEEAA- 211

Query: 231 FPLITREGHNVLDVIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIV 288
            P +T   + V+D+     I  L   +E++ +  GVV+HG+   +  T ++A + G+ + 
Sbjct: 212 -PAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFGVTVK 264

[Close]

BLAST of Sed0008848 vs. ExPASy Swiss-Prot
Match: Q9ZU38 (Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.1e-22
Identity = 74/239 (30.96%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 51  LLQAAKHTVDAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAA 110
           L + A +    +V+ GMV+GLG+G  +  A++ +G LLR G L++IVGIP S  +  +A 
Sbjct: 36  LKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQAL 95

Query: 111 KAGIPLDQFNDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAF 170
             GIPL   +    ID S D AD  E    + ++  R G    S+++EK I  AS +   
Sbjct: 96  SLGIPLSDLDAHPVIDLSIDGAD--EVDPFLNLVKGRGG----SLLREKMIEGASKKFVV 155

Query: 171 MIKES---QYMGGPEGSIPVLVNSLNWMQTAEEIDDLFLG-DAEVWRRPSIGHAGPHGGD 230
           ++ +S   +++GG + ++PV +    W  TAE++  L  G   E   R  +G  G     
Sbjct: 156 IVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLR--LGEKGK---- 215

Query: 231 FPLITREGHNVLDVIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQI 286
              +T  G+ ++D+     +  L  V++++ ++ GVV+HG+   +  T +IA E G++I
Sbjct: 216 -AFVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKI 261

[Close]

BLAST of Sed0008848 vs. ExPASy Swiss-Prot
Match: Q5FQ98 (Ribose-5-phosphate isomerase A OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpiA PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-20
Identity = 75/233 (32.19%), Postives = 119/233 (51.07%), Query Frame = 0


Query: 54  AAKHTVDAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAG 113
           AA+   D  VK GMV+GLG+G  +   IE LG  +  G   +I GIP S  S  +A KAG
Sbjct: 13  AAREAAD-MVKSGMVVGLGTGSTAAYMIERLGERVAEGL--EIFGIPTSDDSEDKALKAG 72

Query: 114 IPLDQFNDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIK 173
           IPL  F+   +ID + D AD ++ G+L  + G     +  ++++EK +  A+ +   ++ 
Sbjct: 73  IPLTDFSAHRRIDIAIDGADEVQRGSLNLIKG-----LGGALLREKIVAQAAKRFVVIVD 132

Query: 174 ESQYMG--GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLIT 233
            ++ +   G    +PV V S  W  TAE +     G   V  +P    AG        +T
Sbjct: 133 GTKPVDLLGERAPVPVEVISFGWECTAERL--AACGARGV--KPRTDRAGS-----LFVT 192

Query: 234 REGHNVLDVIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQ 285
             G+ +LD  F  PI    E+AE +D+I GVV+HG+   +    ++A+  G++
Sbjct: 193 DTGNMILDCHF-GPIEKPEELAEKIDRIVGVVEHGMFLNMASEVLVATPDGVE 227

[Close]

BLAST of Sed0008848 vs. ExPASy Swiss-Prot
Match: Q9S726 (Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPI3 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.3e-20
Identity = 69/259 (26.64%), Postives = 131/259 (50.58%), Query Frame = 0


Query: 33  TIRFRISASTSVLAGGSPLLQAAKHTVDAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGA 92
           ++ F + A +  L+       AA+  V+A +K GMV+GLG+G  +  A++ +G+LL +G 
Sbjct: 31  SVSFSVKAQSVALSQDDLKKLAAEKAVEA-IKPGMVLGLGTGSTAAFAVDQIGKLLSSGE 90

Query: 93  LKDIVGIPMSITSASEAAKAGIPLDQFNDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVE 152
           L DIVGIP S  +  +A   GIPL   +   +ID + D AD ++    + ++  R G   
Sbjct: 91  LYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRIDLAIDGADEVDPN--LDLVKGRGG--- 150

Query: 153 DSIIQEKSILNASNQLAFMIKESQYMGGPEGS---IPVLVNSLNWMQTAEEIDDLF--LG 212
            ++++EK +   +++   +  +++ + G  GS   +PV V    W      + DLF   G
Sbjct: 151 -ALLREKMVEAVADKFIVVADDTKLVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFG 210

Query: 213 DAEVWRRPSIGHAGPHGGDFPLITREGHNVLDVIFTSPISSLVEVAESLDQIDGVVDHGV 272
                R          G   P +T   + ++D+ F +P+      A+ + +  GVV+HG+
Sbjct: 211 CESKLR--------VDGDGKPYVTDNSNYIIDLYFKTPLKDGFAAAKEIGKFQGVVEHGL 270

Query: 273 ISKLPCTAVIASESGLQIV 287
              +  + +IA ++G++++
Sbjct: 271 FLGMATSVIIAGKNGVEVM 274

[Close]

BLAST of Sed0008848 vs. ExPASy TrEMBL
Match: A0A0A0LY74 (Ribose-5-phosphate isomerase OS=Cucumis sativus OX=3659 GN=Csa_1G554560 PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.1e-139
Identity = 264/295 (89.49%), Postives = 272/295 (92.20%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M V MAASLSTSPY   SKS +  K SPN  L + RF ISASTSVLAGGSPLLQAAKHTV
Sbjct: 1   MRVGMAASLSTSPYTCSSKSIVFPKCSPNIKLGSNRFTISASTSVLAGGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           D YVK GMVIGLGSGQASGMAI+YLGRLLR GALKDIVG+PMSI SASEAAKAGIPLDQF
Sbjct: 61  DTYVKSGMVIGLGSGQASGMAIQYLGRLLRAGALKDIVGVPMSIASASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADI+EEGTLIAVIGHRK QVEDSIIQEKSILNASNQLAFMIKESQYMG
Sbjct: 121 NDSSQIDFSFDDADIIEEGTLIAVIGHRKPQVEDSIIQEKSILNASNQLAFMIKESQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFP +TREGHNVLD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPFVTREGHNVLD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNMA 295
           VIFTSPISSL EVAESLDQI+GVVDHGVISK PCTAVIASESGLQI+DNLQRNMA
Sbjct: 241 VIFTSPISSLAEVAESLDQINGVVDHGVISKFPCTAVIASESGLQIIDNLQRNMA 295

[Close]

BLAST of Sed0008848 vs. ExPASy TrEMBL
Match: A0A1S3C9F9 (Ribose-5-phosphate isomerase OS=Cucumis melo OX=3656 GN=LOC103498321 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.8e-139
Identity = 262/295 (88.81%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M VAMAASLS+SPY   SKS +L K SP   L T RF ISASTSVL+GGSPLLQAAKHTV
Sbjct: 1   MRVAMAASLSSSPYTCSSKSIVLSKCSPKIKLGTNRFTISASTSVLSGGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           DAYVK GMV+GLGSGQASGMAI+YLGRLLR GALKDIVG+PMSI SASEAAKAGIPLDQF
Sbjct: 61  DAYVKSGMVVGLGSGQASGMAIQYLGRLLRAGALKDIVGVPMSIASASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADI+EEGTLIAVIGHRK QVEDSIIQEKSILNASNQLAFMIKESQYMG
Sbjct: 121 NDSSQIDFSFDDADIIEEGTLIAVIGHRKPQVEDSIIQEKSILNASNQLAFMIKESQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFP +TREGHNVLD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPFVTREGHNVLD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNMA 295
           VIFTSPISSL EVAESLDQIDGVVDHGVISK PCTAVIA+ESGLQI+DN+Q+NMA
Sbjct: 241 VIFTSPISSLAEVAESLDQIDGVVDHGVISKFPCTAVIAAESGLQIIDNVQKNMA 295

[Close]

BLAST of Sed0008848 vs. ExPASy TrEMBL
Match: A0A6J1GTS8 (Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111457043 PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 4.0e-138
Identity = 263/294 (89.46%), Postives = 269/294 (91.50%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M VAMAASLS SPY   SKS LLRK  P        FRISASTSVLA GSPLLQAAKHTV
Sbjct: 1   MRVAMAASLSASPYTCSSKSILLRKFRPKIKFRRNCFRISASTSVLADGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           DAYVK GMVIGLGSGQASGMAI YLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF
Sbjct: 61  DAYVKSGMVIGLGSGQASGMAIGYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADIMEEGTLIAVIGHRK QVEDSIIQEKSILNASNQLAFM+K+SQYMG
Sbjct: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKPQVEDSIIQEKSILNASNQLAFMVKDSQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFP +TREGHN+LD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPFVTREGHNILD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNM 294
           VIFTSPISSL  VAESL+QIDG+VDHGVISK PCTAVIASESGLQIVDNLQRNM
Sbjct: 241 VIFTSPISSLAAVAESLEQIDGIVDHGVISKFPCTAVIASESGLQIVDNLQRNM 294

[Close]

BLAST of Sed0008848 vs. ExPASy TrEMBL
Match: A0A6J1GSB5 (Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111457043 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.9e-137
Identity = 263/294 (89.46%), Postives = 269/294 (91.50%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M VAMAASLS SPY   SKS LLRK  P        FRISASTSVLA GSPLLQAAKHTV
Sbjct: 1   MRVAMAASLSASPYTCSSKSILLRKFRPKIKFRRNCFRISASTSVLADGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           DAYVK GMVIGLGSGQASGMAI YLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF
Sbjct: 61  DAYVKSGMVIGLGSGQASGMAIGYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADIMEEGTLIAVIGHRK QVEDSIIQEKSILNASNQLAFM+K+SQYMG
Sbjct: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKPQVEDSIIQEKSILNASNQLAFMVKDSQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFP +TREGHN+LD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPFVTREGHNILD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNM 294
           VIFTSPISSL  VAESL+QIDG+VDHGVISK PCTAVIASESGLQIVDNLQRNM
Sbjct: 241 VIFTSPISSL--VAESLEQIDGIVDHGVISKFPCTAVIASESGLQIVDNLQRNM 292

[Close]

BLAST of Sed0008848 vs. ExPASy TrEMBL
Match: A0A6J1K692 (Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111490455 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 8.4e-136
Identity = 260/294 (88.44%), Postives = 266/294 (90.48%), Query Frame = 0


Query: 1   MGVAMAASLSTSPYK-YSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTV 60
           M V MAASLS  P    SKS LLRK  P   L    FRISASTSVLA GSPLLQAAKHTV
Sbjct: 1   MRVGMAASLSAPPCTCSSKSILLRKFRPKIKLRRNCFRISASTSVLADGSPLLQAAKHTV 60

Query: 61  DAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120
           DAYVK GMVIGLGSGQASGMAI YLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF
Sbjct: 61  DAYVKSGMVIGLGSGQASGMAIGYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQF 120

Query: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAFMIKESQYMG 180
           NDSSQIDFSFDDADIMEEGTLIAVIGHRK QVEDSIIQEK ILNASNQLAFM+K+SQYMG
Sbjct: 121 NDSSQIDFSFDDADIMEEGTLIAVIGHRKPQVEDSIIQEKYILNASNQLAFMVKDSQYMG 180

Query: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLD 240
           GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGP GGDFP +TREGHN+LD
Sbjct: 181 GPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPLGGDFPFVTREGHNILD 240

Query: 241 VIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIVDNLQRNM 294
           VIFTSPISSL  VAESL+QIDG+VDHGVISK PCTAVIASESGLQIVDNLQRNM
Sbjct: 241 VIFTSPISSLAAVAESLEQIDGIVDHGVISKFPCTAVIASESGLQIVDNLQRNM 294

[Close]

BLAST of Sed0008848 vs. TAIR 10
Match: AT5G44520.1 (NagB/RpiA/CoA transferase-like superfamily protein )

HSP 1 Score: 309.3 bits (791), Expect = 3.3e-84
Identity = 163/283 (57.60%), Postives = 209/283 (73.85%), Query Frame = 0


Query: 5   MAASLSTSPYKYSKSTLLRKRSPNFNLPTIRFRISASTSVLAGGSPLLQAAKHTVDAYVK 64
           M  + +++P+  S S +  +R  NF     RF + AS S     SPLL+AA HTVD YVK
Sbjct: 1   MVTATASTPFSLSSSVVFTRRR-NFK----RFPVCASLSPEV--SPLLRAAHHTVDNYVK 60

Query: 65  RGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAAKAGIPLDQFNDSSQ 124
            GM+IGLGSG+AS  AI YLG+ L +G+L ++VG+PMS  SASEAAK GIPL+ + D  Q
Sbjct: 61  SGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKYGIPLEYYRDGVQ 120

Query: 125 IDFSFDDADIMEEGTLIAVIGHRK-GQVEDSIIQEKSILNASNQLAFMIKESQYMGGPEG 184
           IDF+F DAD +EE TLIAVIG R+  Q +D I+++KSI+  +++  FMIKE QY  G EG
Sbjct: 121 IDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFMIKEEQYKAGLEG 180

Query: 185 SIPVLVNSLNWMQTAEEIDDLFLGDAEVWRRPSIGHAGPHGGDFPLITREGHNVLDVIFT 244
           SIPVLV SLNW+  AEEIDDL+LGDAEVWRR S+ + GP GGDFP++T +GHN+LDVIFT
Sbjct: 181 SIPVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGDFPIVTSDGHNILDVIFT 240

Query: 245 SPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIV 287
           +PI SL ++A SLD+IDGVVDHG+I K  CT VIA E+ ++ V
Sbjct: 241 TPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIAEETVVRSV 276

[Close]

BLAST of Sed0008848 vs. TAIR 10
Match: AT1G71100.1 (Ribose 5-phosphate isomerase, type A protein )

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-24
Identity = 76/241 (31.54%), Postives = 123/241 (51.04%), Query Frame = 0


Query: 51  LLQAAKHTVDAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAA 110
           L + A +    +V+ GMVIGLG+G  +  A+  +  LLR G LKDI+GIP S T+  +A 
Sbjct: 32  LKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTSTTTHEQAV 91

Query: 111 KAGIPLDQFNDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAF 170
             GIPL   +    +D S D AD  E    + ++  R G    S+++EK I  AS +   
Sbjct: 92  SLGIPLSDLDSHPVVDLSIDGAD--EVDPALNLVKGRGG----SLLREKMIEGASKKFVV 151

Query: 171 MIKES---QYMGGPEGSIPVLVNSLNWMQTAEEIDDLFLGDAEVWR-RPSIGHAGPHGGD 230
           ++ ES   +Y+GG   ++PV V       T  ++++LF     V + R  IG  G     
Sbjct: 152 IVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNGEEAA- 211

Query: 231 FPLITREGHNVLDVIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQIV 288
            P +T   + V+D+     I  L   +E++ +  GVV+HG+   +  T ++A + G+ + 
Sbjct: 212 -PAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFGVTVK 264

[Close]

BLAST of Sed0008848 vs. TAIR 10
Match: AT2G01290.1 (ribose-5-phosphate isomerase 2 )

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-23
Identity = 74/239 (30.96%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 51  LLQAAKHTVDAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGALKDIVGIPMSITSASEAA 110
           L + A +    +V+ GMV+GLG+G  +  A++ +G LLR G L++IVGIP S  +  +A 
Sbjct: 36  LKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQAL 95

Query: 111 KAGIPLDQFNDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVEDSIIQEKSILNASNQLAF 170
             GIPL   +    ID S D AD  E    + ++  R G    S+++EK I  AS +   
Sbjct: 96  SLGIPLSDLDAHPVIDLSIDGAD--EVDPFLNLVKGRGG----SLLREKMIEGASKKFVV 155

Query: 171 MIKES---QYMGGPEGSIPVLVNSLNWMQTAEEIDDLFLG-DAEVWRRPSIGHAGPHGGD 230
           ++ +S   +++GG + ++PV +    W  TAE++  L  G   E   R  +G  G     
Sbjct: 156 IVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLR--LGEKGK---- 215

Query: 231 FPLITREGHNVLDVIFTSPISSLVEVAESLDQIDGVVDHGVISKLPCTAVIASESGLQI 286
              +T  G+ ++D+     +  L  V++++ ++ GVV+HG+   +  T +IA E G++I
Sbjct: 216 -AFVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKI 261

[Close]

BLAST of Sed0008848 vs. TAIR 10
Match: AT3G04790.1 (Ribose 5-phosphate isomerase, type A protein )

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-21
Identity = 69/259 (26.64%), Postives = 131/259 (50.58%), Query Frame = 0


Query: 33  TIRFRISASTSVLAGGSPLLQAAKHTVDAYVKRGMVIGLGSGQASGMAIEYLGRLLRTGA 92
           ++ F + A +  L+       AA+  V+A +K GMV+GLG+G  +  A++ +G+LL +G 
Sbjct: 31  SVSFSVKAQSVALSQDDLKKLAAEKAVEA-IKPGMVLGLGTGSTAAFAVDQIGKLLSSGE 90

Query: 93  LKDIVGIPMSITSASEAAKAGIPLDQFNDSSQIDFSFDDADIMEEGTLIAVIGHRKGQVE 152
           L DIVGIP S  +  +A   GIPL   +   +ID + D AD ++    + ++  R G   
Sbjct: 91  LYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRIDLAIDGADEVDPN--LDLVKGRGG--- 150

Query: 153 DSIIQEKSILNASNQLAFMIKESQYMGGPEGS---IPVLVNSLNWMQTAEEIDDLF--LG 212
            ++++EK +   +++   +  +++ + G  GS   +PV V    W      + DLF   G
Sbjct: 151 -ALLREKMVEAVADKFIVVADDTKLVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFG 210

Query: 213 DAEVWRRPSIGHAGPHGGDFPLITREGHNVLDVIFTSPISSLVEVAESLDQIDGVVDHGV 272
                R          G   P +T   + ++D+ F +P+      A+ + +  GVV+HG+
Sbjct: 211 CESKLR--------VDGDGKPYVTDNSNYIIDLYFKTPLKDGFAAAKEIGKFQGVVEHGL 270

Query: 273 ISKLPCTAVIASESGLQIV 287
              +  + +IA ++G++++
Sbjct: 271 FLGMATSVIIAGKNGVEVM 274

The following BLAST results are available for this feature:

BLAST of Sed0008848 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895363.1	3.1e-140	90.51	probable ribose-5-phosphate isomerase 4, chloroplastic [Benincasa hispida] >XP_0...	[more]
XP_004135562.1	4.4e-139	89.49	probable ribose-5-phosphate isomerase 4, chloroplastic [Cucumis sativus]	[more]
XP_008459119.1	5.8e-139	88.81	PREDICTED: probable ribose-5-phosphate isomerase 4, chloroplastic isoform X2 [Cu...	[more]
XP_023541645.1	9.8e-139	89.80	probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [Cucurbita pep...	[more]
XP_022954935.1	8.3e-138	89.46	probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [Cucurbita mos...	[more]

BLAST of Sed0008848 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI13	4.7e-83	57.60	Probable ribose-5-phosphate isomerase 4, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9C998	4.2e-23	31.54	Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 ...	[more]
Q9ZU38	2.1e-22	30.96	Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 ...	[more]
Q5FQ98	1.9e-20	32.19	Ribose-5-phosphate isomerase A OS=Gluconobacter oxydans (strain 621H) OX=290633 ...	[more]
Q9S726	4.3e-20	26.64	Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Sed0008848 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY74	2.1e-139	89.49	Ribose-5-phosphate isomerase OS=Cucumis sativus OX=3659 GN=Csa_1G554560 PE=3 SV=...	[more]
A0A1S3C9F9	2.8e-139	88.81	Ribose-5-phosphate isomerase OS=Cucumis melo OX=3656 GN=LOC103498321 PE=3 SV=1	[more]
A0A6J1GTS8	4.0e-138	89.46	Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111457043 PE=3 ...	[more]
A0A6J1GSB5	9.9e-137	89.46	Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111457043 PE=3 ...	[more]
A0A6J1K692	8.4e-136	88.44	Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111490455 PE=3 SV...	[more]

BLAST of Sed0008848 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44520.1	3.3e-84	57.60	NagB/RpiA/CoA transferase-like superfamily protein	[more]
AT1G71100.1	3.0e-24	31.54	Ribose 5-phosphate isomerase, type A protein	[more]
AT2G01290.1	1.5e-23	30.96	ribose-5-phosphate isomerase 2	[more]
AT3G04790.1	3.1e-21	26.64	Ribose 5-phosphate isomerase, type A protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004788	Ribose 5-phosphate isomerase, type A	PFAM	PF06026	Rib_5-P_isom_A	coord: 97..282 e-value: 5.6E-32 score: 110.7
IPR004788	Ribose 5-phosphate isomerase, type A	CDD	cd01398	RPI_A	coord: 54..279 e-value: 5.16105E-50 score: 162.642
None	No IPR available	GENE3D	3.30.70.260		coord: 175..257 e-value: 2.5E-45 score: 156.5
None	No IPR available	GENE3D	3.40.50.1360		coord: 53..269 e-value: 2.5E-45 score: 156.5
None	No IPR available	PANTHER	PTHR43748:SF1	RIBOSE-5-PHOSPHATE ISOMERASE 4, CHLOROPLASTIC-RELATED	coord: 39..290
None	No IPR available	PANTHER	PTHR43748	RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED	coord: 39..290
None	No IPR available	SUPERFAMILY	75445	D-ribose-5-phosphate isomerase (RpiA), lid domain	coord: 184..267
IPR037171	NagB/RpiA transferase-like	SUPERFAMILY	100950	NagB/RpiA/CoA transferase-like	coord: 54..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008848.1	Sed0008848.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
molecular_function	GO:0004751	ribose-5-phosphate isomerase activity