Sed0008846 (gene) Chayote v1

Overview


Name	Sed0008846
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG04: 47039122 .. 47039640 (-)
RNA-Seq Expression	Sed0008846
Synteny	Sed0008846

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGTCGTCTTGCACGCAGTCCCATCAAAGCTTCTAAGAATGCCTCTTTATCAACTATATATAGATTTACACATTTGATATGGTTCAGAAGCAACCACAAGCCTTTACTTCCCCACTCAAAAGAAACTTTCTTCTCTCTAAAACGCATTTTGCGATCTTCGTGTGCTCTAAGTGTACGATTTTATCGGAAAAGCATGGGAATTCGCCATCTTCTTAAAATAATCCAAGGAGTTAAAGCAGTTCCCAAGGGATTCTGCGCAGTCTATGTCGGAGAAAGCGAAAAGAAACAGTTCGTGATCCCGATAACTTATTTGAATCAACCATGTTTCCAAGCGTTGTTGTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCAATGGGTGGTCTTACTATTCATTGCAGAGATGAAATTTTCACCAATCTCATCTTTCATCTGAACGGTCTATGAGAGATGCAATGAATTCTATAGAATACAACCAATTTGTAGAATAGAGTTATTAGATTTAACCAAAAC

mRNA sequence

ATGTCTCGTCGTCTTGCACGCAGTCCCATCAAAGCTTCTAAGAATGCCTCTTTATCAACTATATATAGATTTACACATTTGATATGGTTCAGAAGCAACCACAAGCCTTTACTTCCCCACTCAAAAGAAACTTTCTTCTCTCTAAAACGCATTTTGCGATCTTCGTGTGCTCTAAGTGTACGATTTTATCGGAAAAGCATGGGAATTCGCCATCTTCTTAAAATAATCCAAGGAGTTAAAGCAGTTCCCAAGGGATTCTGCGCAGTCTATGTCGGAGAAAGCGAAAAGAAACAGTTCGTGATCCCGATAACTTATTTGAATCAACCATGTTTCCAAGCGTTGTTGTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCAATGGGTGGTCTTACTATTCATTGCAGAGATGAAATTTTCACCAATCTCATCTTTCATCTGAACGGTCTATGAGAGATGCAATGAATTCTATAGAATACAACCAATTTGTAGAATAGAGTTATTAGATTTAACCAAAAC

Coding sequence (CDS)

ATGTCTCGTCGTCTTGCACGCAGTCCCATCAAAGCTTCTAAGAATGCCTCTTTATCAACTATATATAGATTTACACATTTGATATGGTTCAGAAGCAACCACAAGCCTTTACTTCCCCACTCAAAAGAAACTTTCTTCTCTCTAAAACGCATTTTGCGATCTTCGTGTGCTCTAAGTGTACGATTTTATCGGAAAAGCATGGGAATTCGCCATCTTCTTAAAATAATCCAAGGAGTTAAAGCAGTTCCCAAGGGATTCTGCGCAGTCTATGTCGGAGAAAGCGAAAAGAAACAGTTCGTGATCCCGATAACTTATTTGAATCAACCATGTTTCCAAGCGTTGTTGTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCAATGGGTGGTCTTACTATTCATTGCAGAGATGAAATTTTCACCAATCTCATCTTTCATCTGAACGGTCTATGA

Protein sequence

MSRRLARSPIKASKNASLSTIYRFTHLIWFRSNHKPLLPHSKETFFSLKRILRSSCALSVRFYRKSMGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL

Homology

[Close]

BLAST of Sed0008846 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia])

HSP 1 Score: 148.3 bits (373), Expect = 5.4e-32
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 67  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHH 126
           MG+R LLK  QGV AVPKG+CAVYVGES+KK+FVIPI+YLNQPCFQ LLCQ EEEFGY+H
Sbjct: 1   MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 127 PMGGLTIHCRDEIFTNLIFHLNGL 151
           PMGGLTIHCRD+IFT+LI  LN L
Sbjct: 61  PMGGLTIHCRDDIFTDLISRLNDL 84

[Close]

BLAST of Sed0008846 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-30
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 67  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHH 126
           M + HLLK  QGV ++PKG+CAVYVGES+KK+F+IPI+YLNQPCFQ LL QTEEEFGYHH
Sbjct: 1   MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 127 PMGGLTIHCRDEIFTNLIFHLNGL 151
           PMGGLTIHC+D IFTNLI  LN L
Sbjct: 61  PMGGLTIHCKDAIFTNLISRLNDL 84

[Close]

BLAST of Sed0008846 vs. NCBI nr
Match: KAA0049710.1 (auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-30
Identity = 62/84 (73.81%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 67  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHH 126
           M +RHLLK  +GV AVPKG+CAVYVG+S+KK+F+IPI YLN+PCFQ LLCQTEEEFGY+H
Sbjct: 1   MRLRHLLKRNEGVSAVPKGYCAVYVGQSQKKRFMIPIAYLNRPCFQELLCQTEEEFGYYH 60

Query: 127 PMGGLTIHCRDEIFTNLIFHLNGL 151
           PMGGLTIHCRD+IF   I H+N L
Sbjct: 61  PMGGLTIHCRDDIFAEFISHMNDL 84

[Close]

BLAST of Sed0008846 vs. NCBI nr
Match: KAE8645660.1 (hypothetical protein Csa_020551 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 9.5e-29
Identity = 61/78 (78.21%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 67  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHH 126
           MGIR LLK  QGV  +PKG+CAVYVGE++KK+FVIPIT+LNQ CFQ LL QTEE+FGYHH
Sbjct: 1   MGIRQLLKRNQGVSTIPKGYCAVYVGENQKKRFVIPITHLNQSCFQELLSQTEEKFGYHH 60

Query: 127 PMGGLTIHCRDEIFTNLI 145
           PMGGLTIHCRD+IFT+LI
Sbjct: 61  PMGGLTIHCRDDIFTDLI 78

[Close]

BLAST of Sed0008846 vs. NCBI nr
Match: XP_016900447.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0049702.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa] >TYK12170.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 9.8e-26
Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 77  QGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCR 136
           +GV  VPKG+CAVYVGE +KK+FVIP+TYLNQPCFQ LL Q EEEFGY+HPMGGLTI CR
Sbjct: 13  EGVAVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQVLLSQAEEEFGYYHPMGGLTIQCR 72

Query: 137 DEIFTNLIFHLN 149
           ++IFTNLI  LN
Sbjct: 73  EDIFTNLISQLN 84

[Close]

BLAST of Sed0008846 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.4e-21
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 62  FYRKSMGIRHLLKIIQGV-KAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEE 121
           F R  +G + +L    G   A PKGF AVYVGES+KK++++P++YLNQP FQALL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEE 62

Query: 122 EFGYHHPMGGLTIHCRDEIFTNLIFHL 148
           EFG+ HPMGGLTI C ++ F N+   L
Sbjct: 63  EFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0008846 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.4e-21
Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 62  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEE 121
           F R  +G + +L +      A PKGF AVYVGES+KK++++PI+YLNQP FQALL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEE 62

Query: 122 EFGYHHPMGGLTIHCRDEIFTNL 144
           EFG+ HPMGGLTI C ++ F N+
Sbjct: 63  EFGFDHPMGGLTIPCPEDTFINV 85

[Close]

BLAST of Sed0008846 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-20
Identity = 45/85 (52.94%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 64  RKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEF 123
           R  +G + +L +    V A PKGF AVYVGES+KK++++P++YLNQP FQALL ++E+EF
Sbjct: 5   RSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEF 64

Query: 124 GYHHPMGGLTIHCRDEIFTNLIFHL 148
           G+ HPMGGLTI C ++ F N+   L
Sbjct: 65  GFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Sed0008846 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-20
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 79  VKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDE 138
           V A PKGF AVYVGES+KK++++P++YLNQP FQALL ++EEEFG+ HPMGGLTI C ++
Sbjct: 21  VSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPED 80

Query: 139 IFTNLIFHLN 149
            F N+   L+
Sbjct: 81  TFINVTSRLH 90

[Close]

BLAST of Sed0008846 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.3e-20
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 62  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEE 121
           F R  +G + +L +      A PKGF AVYVGES+KK++++P++YL+QP FQALL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEE 62

Query: 122 EFGYHHPMGGLTIHCRDEIFTNLIFHL 148
           EFG+ HPMGGLTI C ++ F N+   L
Sbjct: 63  EFGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0008846 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.6e-32
Identity = 66/84 (78.57%), Postives = 77/84 (91.67%), Query Frame = 0


Query: 67  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHH 126
           M ++HLLK  QGV AVPKG+CAVYVGES+KK+FVIPITYLN+PCFQ LLCQTEEEFGY+H
Sbjct: 1   MRLQHLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNRPCFQQLLCQTEEEFGYYH 60

Query: 127 PMGGLTIHCRDEIFTNLIFHLNGL 151
           PMGGLTIHCRD+IFT+LI ++N L
Sbjct: 61  PMGGLTIHCRDDIFTDLISNMNDL 84

[Close]

BLAST of Sed0008846 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.6e-32
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 67  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHH 126
           MG+R LLK  QGV AVPKG+CAVYVGES+KK+FVIPI+YLNQPCFQ LLCQ EEEFGY+H
Sbjct: 1   MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 127 PMGGLTIHCRDEIFTNLIFHLNGL 151
           PMGGLTIHCRD+IFT+LI  LN L
Sbjct: 61  PMGGLTIHCRDDIFTDLISRLNDL 84

[Close]

BLAST of Sed0008846 vs. ExPASy TrEMBL
Match: A0A0A0K5U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.4e-31
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 67  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHH 126
           M + HLLK  QGV ++PKG+CAVYVGES+KK+F+IPI+YLNQPCFQ LL QTEEEFGYHH
Sbjct: 1   MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 127 PMGGLTIHCRDEIFTNLIFHLNGL 151
           PMGGLTIHC+D IFTNLI  LN L
Sbjct: 61  PMGGLTIHCKDAIFTNLISRLNDL 84

[Close]

BLAST of Sed0008846 vs. ExPASy TrEMBL
Match: A0A5A7U363 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00540 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 8.3e-31
Identity = 62/84 (73.81%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 67  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHH 126
           M +RHLLK  +GV AVPKG+CAVYVG+S+KK+F+IPI YLN+PCFQ LLCQTEEEFGY+H
Sbjct: 1   MRLRHLLKRNEGVSAVPKGYCAVYVGQSQKKRFMIPIAYLNRPCFQELLCQTEEEFGYYH 60

Query: 127 PMGGLTIHCRDEIFTNLIFHLNGL 151
           PMGGLTIHCRD+IF   I H+N L
Sbjct: 61  PMGGLTIHCRDDIFAEFISHMNDL 84

[Close]

BLAST of Sed0008846 vs. ExPASy TrEMBL
Match: A0A5D3CL76 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001100 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.7e-26
Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 77  QGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCR 136
           +GV  VPKG+CAVYVGE +KK+FVIP+TYLNQPCFQ LL Q EEEFGY+HPMGGLTI CR
Sbjct: 13  EGVAVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQVLLSQAEEEFGYYHPMGGLTIQCR 72

Query: 137 DEIFTNLIFHLN 149
           ++IFTNLI  LN
Sbjct: 73  EDIFTNLISQLN 84

[Close]

BLAST of Sed0008846 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-22
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 62  FYRKSMGIRHLLKIIQGV-KAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEE 121
           F R  +G + +L    G   A PKGF AVYVGES+KK++++P++YLNQP FQALL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEE 62

Query: 122 EFGYHHPMGGLTIHCRDEIFTNLIFHL 148
           EFG+ HPMGGLTI C ++ F N+   L
Sbjct: 63  EFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0008846 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-22
Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 62  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEE 121
           F R  +G + +L +      A PKGF AVYVGES+KK++++PI+YLNQP FQALL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEE 62

Query: 122 EFGYHHPMGGLTIHCRDEIFTNL 144
           EFG+ HPMGGLTI C ++ F N+
Sbjct: 63  EFGFDHPMGGLTIPCPEDTFINV 85

[Close]

BLAST of Sed0008846 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.9 bits (250), Expect = 9.1e-22
Identity = 45/85 (52.94%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 64  RKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEF 123
           R  +G + +L +    V A PKGF AVYVGES+KK++++P++YLNQP FQALL ++E+EF
Sbjct: 5   RSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEF 64

Query: 124 GYHHPMGGLTIHCRDEIFTNLIFHL 148
           G+ HPMGGLTI C ++ F N+   L
Sbjct: 65  GFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Sed0008846 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 79  VKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDE 138
           V A PKGF AVYVGES+KK++++P++YLNQP FQALL ++EEEFG+ HPMGGLTI C ++
Sbjct: 21  VSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPED 80

Query: 139 IFTNLIFHLN 149
            F N+   L+
Sbjct: 81  TFINVTSRLH 90

[Close]

BLAST of Sed0008846 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 5.9e-21
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 62  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEE 121
           F R  +G + +L +      A PKGF AVYVGES+KK++++P++YL+QP FQALL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEE 62

Query: 122 EFGYHHPMGGLTIHCRDEIFTNLIFHL 148
           EFG+ HPMGGLTI C ++ F N+   L
Sbjct: 63  EFGFAHPMGGLTIPCPEDTFINVTSRL 89

The following BLAST results are available for this feature:

BLAST of Sed0008846 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136192.1	5.4e-32	79.76	auxin-responsive protein SAUR24-like [Momordica charantia]	[more]
XP_011658582.1	1.3e-30	76.19	auxin-responsive protein SAUR24 [Cucumis sativus]	[more]
KAA0049710.1	1.7e-30	73.81	auxin-induced protein 15A-like [Cucumis melo var. makuwa]	[more]
KAE8645660.1	9.5e-29	78.21	hypothetical protein Csa_020551 [Cucumis sativus]	[more]
XP_016900447.1	9.8e-26	76.39	PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0049702.1 auxin-ind...	[more]

BLAST of Sed0008846 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	3.4e-21	54.02	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	4.4e-21	55.42	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	1.3e-20	52.94	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJF6	2.2e-20	61.43	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FJG1	8.3e-20	51.72	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]

BLAST of Sed0008846 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4K1	2.6e-32	78.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1	[more]
A0A6J1C4W2	2.6e-32	79.76	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A0A0K5U4	6.4e-31	76.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1	[more]
A0A5A7U363	8.3e-31	73.81	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CL76	4.7e-26	76.39	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Sed0008846 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18080.1	2.4e-22	54.02	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	3.1e-22	55.42	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	9.1e-22	52.94	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.6e-21	61.43	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	5.9e-21	51.72	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 79..144 e-value: 4.2E-20 score: 71.7
None	No IPR available	PANTHER	PTHR31929:SF40	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 71..145
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 71..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008846.1	Sed0008846.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin